Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0004412

Physical Location & Seq

Genomic Coordinates Forward (+)

26450873 .. 26455966

Gene Structure 5094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G285000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2877 bp

ATGGAGGACCACGTGTTCCTCACGTGCGACCACCCTCTCAACCTTCCAACACTTTCAACCAACGAACCTCTCTCTCTCTCAGCCCTAGCTTCCCTGAGGTCTCTGATCATCAACCCCTCAACTACCGCGCCCACAATCTCTTCCGTCATCGAAACCCTAACTCGCTCGCTCCAACTCAGTCGCGACCCGCTCGCCATTCACCACACTCTCAAGCTCCTCACTGACATGGCCTTGCGACTCCCCCACCTCTCAGGCGTCGTCTTCGACTCGGTCTGTTCCCACTCGCTCCTTTCCACCGATTCGACCCGCGTCGCCGCCGAATCTCTCGACGCACTCGCTTCTATCGCGGAGGGCAACCGAGTCCTAGCTCCCGGCATTGAAGAATTGGACGACCGTTTATTCGCCTCGCTCTGTTTCAGTCCATCTCTTTCCGTACGGCCATGGCTTCTCAGAAACGCCGACAGGTTTGGTGTACAGCCTCATTTGTTATTCACTCTGTTTCTAGGGTTTACGAAAGATCCATATCCGTACGTGAGGAAAGTTGCTTTGGACGGACTTGTTGACTTGAGCAAGAACGGTGTTATTGAGGACCCTGACATGATCGAAGGGTGCTACTTCCGTGCAGTTGAGCTTCTAAACGACATGGAAGATTGCGTTAGATCGGCTGCAGTTCGCACGGTGTGTGCTTGGGGTCTAATGCTGGTGGCGTGCAAGTCGGAGACGAAGGCATATTGGTCTGATGAAGTATTTGTCAAACTTTGTTCAACAGTGAGAGACATGAGCATGGAGGTTAGAGTTGAAGCTTTTTGTGCCCTTGGGAAGATAGAAATGGTATCTGAGGAAATTCTTTTGCAAACCCTGTCAAAGAAAGTTCTAGTGACCATGAAGGGAAAGAAATCTCTTGCTCAGTGCTCTGATGAACAACTAGAAACATCAGGGTCAAGTGTTGCTGGAGCTTTCATGCATGGGCTTGAGGATGAATTCCATGAGGTGCGAAAAGCTGCATGTCATTCTCTGCGTACACTGACCATACTCTCTGCCAAGTTTGCTGGAGAAGCCTTAAACTTACTGATGGATGTACTGAATGATGACTCAATTCTTGTCCGGCTACAAGCTTTTGAAACTATGCATCGAATGGCATCCTTTGACTGTCTGACAGTGCAAGAAACACACATGCATATGTTTCTTGGCACCCTGGTTGACAATGATACCCTCATAAGATCTTCAGCAAGGAAAATACTTAAATTGGCAAAGCTGCAAAAGTTGAAGTTGTTTAGATTAACTATTGATGCCCTTTTAGAAAATTTGGAAAGACATCCACAGGATGAAGCAGATGTACTATCTGTTTTGTTTCATATTGGACGAAATCATGGAAAGTTTGTGGTCCGCATAATTGAGGAGGTTTTTCCACAGATGGAGCCAATGTCTAATGGCAAGTTGGGCTTTGATAGTGTGAGAGTGGCCGCCTTGCTAGTTCTGGCCATATCAGCTCCACTTTCACATGAACGTGATTGCAATATTCCACCTACAATATTTTCTTATGCAGTTACATACCTGGGAAGGATTTCTCAGGCTTTGAGTGACCTTATGAATCAAAATAGCCTTTTGGATTACTTGTCTCAGTGCAGTAGATCCTCAGGACCATATGCCATAGAGTTCAACTTCAAAGTGGGGGAGCCTTGCTTGCCTAATGCTAATGTTCCAACCTATACGAGTAATGAGATAATTGGTTCCATTGCAATGCCATTGCCCCAAAAGACAGGTGGAACCTCTGAAATTTTGTCTCCAACAATAAAGAAGCCAAGGGAAGCAGGAACTTCACTTGTAGAATACCAGCTAGACGTGCATGATGAAGTTACCAAGTCAATGAATGTTATTCTTGCAAAGGTGAAGGATATCTGGCCACTTGTACTGTCAGGATTTACGAATGAAGTACTGAGGACTTTGAGAAGTTGCAGGGAGGAGTTGGCAACATTTACTTCTGACTCGCATGCATCTGCTGGTGTATTTTCCTTTACGAAGCAATATATCCAGATAGTGAAACTGCTTACAAAGGCATGGGTGAACTTCCTGTCTTCAACACATTTTCCTTGTGGAATGGGAGAATTGGACTTAGTATTGGGAAAGCTGGACAGGAGGCTTAGAGATCTGAAGAGTGCGTTTATAAGATTGTCTGAAGAGGAGGAGTTACATATCTTGGAGCTGATACTTGTGACTTGTATGCTCAGATTGTCTGAAGTGGAAATTTGCTGTCATCTTGGAACCTTGAGAAAGCTCTCTAGTATGATGTCACGGGTGGAATATCTCCTTAGAGATGGATCTGTTGAACCATCCAGGTTTATAATTGGAGTCGGAAAATTATCATCCGAATTTGGTTCTTCTTCTCTCAATGAAGCTTCCTTTAACCCCCTTCTCATTAGAAGGGTACTTGAAAGCTTCTCCCTCAAGCAACTTGTGTTGTGTGGTAGACTCAAGCACATGAAGGCAGAGCTGGATATACCTGACAATGAGTACGAAAATCCTCTTCGGTTTGTTGCGGGACTGCCGGTTGGTATACCATGCCATATCACTCTTCATAACATTTCAGCTGAAAGTAGGTTGTGGCTGAAAATGACTGTAAATAAAGACAACGAATCAACTCAGTTCGTCTTCTTGGATTTAAACCATTTTGGAGGCTGTGATGATGTCAGAGTATTTATGTTTACCGCACCCTTTTACAAAACCCCAAAAGCATTTTCTTTTACGATTAGGGTCTGTATTTGTATGGAATGTTTGTCTGAGGTTGAGGATGTTTCTTCTGTCAAACGTTGGGGTCCAAGACATGAGCTTACATATCTTTGCCGAGAAAAGGATGTTTATCTTTCTATGGTTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009956 GO:0009987 GO:0010467 GO:0010496 GO:0012505 GO:0016070 GO:0016073 GO:0016180 GO:0022622 GO:0031123 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034470 GO:0034472 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048364 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0071704 GO:0090057 GO:0090304 GO:0097708 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

959

Amino Acids

107.06

Weight (kDa)

5.93

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08800 AT3G08800 AT3G08800
fragaria_vesca	FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600 FvH4_6g10600
malus_domestica	MD04G1166800.v1.1
prunus_persica	Prupe.6G285000_v2.0.a1 Prupe.6G285000_v2.0.a1
pyrus_communis	pycom01g05880 pycom04g14820
rosa_chinensis	RchiOBHm_Chr3g0461591 RchiOBHm_Chr3g0461601
rosa_laevigata	RLG00000024915
rosa_multiflora	Rmu_co8098260.1_g000001 Rmu_sc0003578.1_g000001 Rmu_sc0032177.1_g000001 Rmu_sc0040016.1_g000001 Rmu_ssc0000193.1_g000007
rosa_roxburghii	Rroxscaffold_6G00418110 Rroxscaffold_6G00418480
rosa_rugosa	Rorug03G0052200 Rorug03G0052200 Rorug03G0052300 Rorug03G0052300
rosa_samantha	Rh3AG110400 Rh3BG113600 Rh3CG115500 Rh3DG115300
rosa_wichuraiana	Rw3G009340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2165, 2342
AccB1I	GGYRCC	1 cut(s)	1190
AccBSI	CCGCTC	1 cut(s)	190
AccI	GTMKAC	2 cut(s)	2467, 2554
AccII	CGCG	4 cut(s)	128, 183, 309, 347
AciI	CCGC	9 cut(s)	126, 188, 307, 315, 347, 1387, 1464, 2537, 2706
AclI	AACGTT	1 cut(s)	2806
AclWI	GGATC	3 cut(s)	512, 1626, 2326
AcoI	YGGCCR	4 cut(s)	437, 1461, 1479, 1901
AcsI	RAATTY	6 cut(s)	843, 980, 1303, 1776, 2244, 2369
AcuI	CTGAAG	4 cut(s)	1209, 2171, 2196, 2256
AcvI	CACGTG	2 cut(s)	13, 24
AcyI	GRCGYC	1 cut(s)	255
AdeI	CACNNNGTG	1 cut(s)	681
AfiI	CCNNNNNNNGG	1 cut(s)	2848
AflIII	ACRYGT	1 cut(s)	12
AjiI	CACGTC	1 cut(s)	1843
AjnI	CCWGG	3 cut(s)	1194, 1554, 2333
AjuI	GAANNNNNNNTTGG	4 cut(s)	530, 562, 2719, 2751
AloI	GAACNNNNNNTCC	1 cut(s)	31
Alw21I	GWGCWC	1 cut(s)	914
Alw26I	GTCTC	5 cut(s)	105, 713, 768, 1623, 1788
AlwI	GGATC	3 cut(s)	512, 1626, 2326
AoxI	GGCC	5 cut(s)	228, 437, 1461, 1479, 1901
ApeKI	GCWGC	3 cut(s)	665, 1001, 1255
ApoI	RAATTY	6 cut(s)	843, 980, 1303, 1776, 2244, 2369
ArsI	GACNNNNNNTTYG	2 cut(s)	383, 415
Asp700I	GAANNNNTTC	1 cut(s)	1564
AspLEI	GCGC	1 cut(s)	130
AspS9I	GGNCC	5 cut(s)	7, 589, 1384, 1640, 2813
AsuC2I	CCSGG	1 cut(s)	372
AsuHPI	GGTGA	3 cut(s)	191, 1900, 2074
AvaII	GGWCC	5 cut(s)	7, 589, 1384, 1640, 2813
AxyI	CCTNAGG	2 cut(s)	95, 1636
BaeGI	GKGCMC	1 cut(s)	814
BalI	TGGCCA	2 cut(s)	1481, 1903
BanI	GGYRCC	1 cut(s)	1190
BarI	GAAGNNNNNNTAC	2 cut(s)	1320, 1352
BbrPI	CACGTG	2 cut(s)	13, 24
BbsI	GAAGAC	3 cut(s)	253, 2067, 2641
Bbv12I	GWGCWC	1 cut(s)	914
BbvI	GCAGC	3 cut(s)	652, 988, 1242
BccI	CCATC	5 cut(s)	430, 1066, 1408, 2309, 2338
BceAI	ACGGC	1 cut(s)	452
BciT130I	CCWGG	3 cut(s)	1196, 1556, 2335
BclI	TGATCA	1 cut(s)	105
BcnI	CCSGG	1 cut(s)	372
BcoDI	GTCTC	5 cut(s)	105, 713, 768, 1623, 1788
BfaI	CTAG	8 cut(s)	86, 365, 503, 875, 926, 1472, 1838, 2280
BfmI	CTRYAG	1 cut(s)	666
BglII	AGATCT	2 cut(s)	1220, 2146
BisI	GCNGC	5 cut(s)	315, 666, 1002, 1256, 1464
BlsI	GCNGC	5 cut(s)	316, 667, 1003, 1257, 1465
BmcAI	AGTACT	1 cut(s)	1935
Bme1390I	CCNGG	4 cut(s)	372, 1196, 1556, 2335
Bme18I	GGWCC	5 cut(s)	7, 589, 1384, 1640, 2813
BmgBI	CACGTC	1 cut(s)	1843
BmgT120I	GGNCC	5 cut(s)	7, 589, 1384, 1640, 2813
BmiI	GGNNCC	8 cut(s)	591, 1192, 1419, 1677, 1732, 1768, 2263, 2814
BmrFI	CCNGG	4 cut(s)	372, 1196, 1556, 2335
BmsI	GCATC	4 cut(s)	1138, 1148, 1279, 2003
BoxI	GACNNNNGTC	1 cut(s)	308
BpiI	GAAGAC	3 cut(s)	253, 2067, 2641
BpmI	CTGGAG	2 cut(s)	972, 1071
BpuEI	CTTGAG	6 cut(s)	194, 586, 992, 2287, 2429, 2456
BpuMI	CCSGG	1 cut(s)	372
BsaAI	YACGTR	3 cut(s)	13, 24, 532
BsaBI	GATNNNNATC	2 cut(s)	522, 2856
BsaHI	GRCGYC	1 cut(s)	255
BsaI	GGTCTC	1 cut(s)	105
BsaJI	CCNNGG	5 cut(s)	440, 814, 1194, 1555, 1802
BsaXI	ACNNNNNCTCC	2 cut(s)	1409, 1439
Bsc4I	CCNNNNNNNGG	1 cut(s)	2848
Bse118I	RCCGGY	1 cut(s)	2545
Bse21I	CCTNAGG	2 cut(s)	95, 1636
Bse3DI	GCAATG	3 cut(s)	1734, 1745, 1746
Bse8I	GATNNNNATC	2 cut(s)	522, 2856
BseBI	CCWGG	3 cut(s)	1196, 1556, 2335
BseDI	CCNNGG	5 cut(s)	440, 814, 1194, 1555, 1802
BseGI	GGATG	9 cut(s)	982, 1081, 1139, 1315, 1330, 2330, 2363, 2794, 2857
BseJI	GATNNNNATC	2 cut(s)	522, 2856
BseLI	CCNNNNNNNGG	1 cut(s)	2848
BseMI	GCAATG	3 cut(s)	1734, 1745, 1746
BseRI	GAGGAG	5 cut(s)	206, 1412, 1976, 2195, 2198
BseSI	GKGCMC	1 cut(s)	814
BseXI	GCAGC	3 cut(s)	652, 988, 1242
BsgI	GTGCAG	2 cut(s)	642, 1645
Bsh1236I	CGCG	4 cut(s)	128, 183, 309, 347
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	5 cut(s)	230, 439, 1463, 1481, 1903
BshNI	GGYRCC	1 cut(s)	1190
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	914
BsiSI	CCGG	3 cut(s)	372, 1105, 2546
BsiWI	CGTACG	2 cut(s)	433, 528
BslFI	GGGAC	1 cut(s)	2553
BslI	CCNNNNNNNGG	1 cut(s)	2848
BsmAI	GTCTC	5 cut(s)	105, 713, 768, 1623, 1788
BsmBI	CGTCTC	1 cut(s)	713
BsmFI	GGGAC	1 cut(s)	2553
BsnI	GGCC	5 cut(s)	230, 439, 1463, 1481, 1903
Bso31I	GGTCTC	1 cut(s)	105
Bsp1286I	GDGCHC	2 cut(s)	814, 914
Bsp1407I	TGTACA	1 cut(s)	472
Bsp143I	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
Bsp19I	CCATGG	1 cut(s)	440
Bsp68I	TCGCGA	1 cut(s)	183
BspACI	CCGC	9 cut(s)	126, 188, 307, 315, 347, 1387, 1464, 2537, 2706
BspANI	GGCC	5 cut(s)	230, 439, 1463, 1481, 1903
BspFNI	CGCG	4 cut(s)	128, 183, 309, 347
BspLI	GGNNCC	8 cut(s)	591, 1192, 1419, 1677, 1732, 1768, 2263, 2814
BspMAI	CTGCAG	1 cut(s)	670
BspPI	GGATC	3 cut(s)	512, 1626, 2326
BspT107I	GGYRCC	1 cut(s)	1190
BspTNI	GGTCTC	1 cut(s)	105
BsrBI	CCGCTC	1 cut(s)	190
BsrDI	GCAATG	3 cut(s)	1734, 1745, 1746
BsrFI	RCCGGY	1 cut(s)	2545
BsrGI	TGTACA	1 cut(s)	472
BssAI	RCCGGY	1 cut(s)	2545
BssECI	CCNNGG	5 cut(s)	440, 814, 1194, 1555, 1802
BssMI	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
BssNAI	GTATAC	1 cut(s)	2555
BssNI	GRCGYC	1 cut(s)	255
BssT1I	CCWWGG	3 cut(s)	440, 814, 1802
Bst1107I	GTATAC	1 cut(s)	2555
Bst2UI	CCWGG	3 cut(s)	1196, 1556, 2335
Bst4CI	ACNGT	8 cut(s)	395, 578, 679, 769, 1151, 1159, 1914, 2617
Bst6I	CTCTTC	5 cut(s)	145, 2147, 2172, 2529, 2577
BstACI	GRCGYC	1 cut(s)	255
BstAUI	TGTACA	1 cut(s)	472
BstBAI	YACGTR	3 cut(s)	13, 24, 532
BstC8I	GCNNGC	5 cut(s)	167, 192, 709, 1685, 1992
BstDSI	CCRYGG	1 cut(s)	440
BstF5I	GGATG	9 cut(s)	982, 1081, 1139, 1315, 1330, 2330, 2363, 2794, 2857
BstFNI	CGCG	4 cut(s)	128, 183, 309, 347
BstHHI	GCGC	1 cut(s)	130
BstKTI	GATC	8 cut(s)	108, 520, 603, 662, 1223, 1634, 2149, 2321
BstMAI	GTCTC	5 cut(s)	105, 713, 768, 1623, 1788
BstMBI	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
BstMCI	CGRYCG	1 cut(s)	394
BstMWI	GCNNNNNNNGC	8 cut(s)	344, 809, 1046, 1055, 1440, 1487, 1684, 1843
BstNI	CCWGG	3 cut(s)	1196, 1556, 2335
BstNSI	RCATGY	3 cut(s)	1008, 1177, 1994
BstPAI	GACNNNNGTC	1 cut(s)	308
BstSCI	CCNGG	4 cut(s)	370, 1194, 1554, 2333
BstSFI	CTRYAG	1 cut(s)	666
BstSLI	GKGCMC	1 cut(s)	814
BstUI	CGCG	4 cut(s)	128, 183, 309, 347
BstV1I	GCAGC	3 cut(s)	652, 988, 1242
BstV2I	GAAGAC	3 cut(s)	253, 2067, 2641
BstX2I	RGATCY	5 cut(s)	517, 1220, 1631, 2146, 2318
BstYI	RGATCY	5 cut(s)	517, 1220, 1631, 2146, 2318
BstZ17I	GTATAC	1 cut(s)	2555
Bsu36I	CCTNAGG	2 cut(s)	95, 1636
BsuRI	GGCC	5 cut(s)	230, 439, 1463, 1481, 1903
BtgI	CCRYGG	1 cut(s)	440
BtrI	CACGTC	1 cut(s)	1843
BtsCI	GGATG	9 cut(s)	982, 1081, 1139, 1315, 1330, 2330, 2363, 2794, 2857
BtsIMutI	CAGTG	6 cut(s)	219, 774, 914, 1022, 1164, 1628
BtuMI	TCGCGA	1 cut(s)	183
Cac8I	GCNNGC	5 cut(s)	167, 192, 709, 1685, 1992
CfoI	GCGC	1 cut(s)	130
Cfr10I	RCCGGY	1 cut(s)	2545
Cfr13I	GGNCC	5 cut(s)	7, 589, 1384, 1640, 2813
CseI	GACGC	3 cut(s)	244, 298, 338
DpnI	GATC	8 cut(s)	107, 519, 602, 661, 1222, 1633, 2148, 2320
DpnII	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
DraI	TTTAAA	1 cut(s)	2661
DraIII	CACNNNGTG	1 cut(s)	681
EaeI	YGGCCR	4 cut(s)	437, 1461, 1479, 1901
Eam1104I	CTCTTC	5 cut(s)	145, 2147, 2172, 2529, 2577
EarI	CTCTTC	5 cut(s)	145, 2147, 2172, 2529, 2577
Eco130I	CCWWGG	3 cut(s)	440, 814, 1802
Eco31I	GGTCTC	1 cut(s)	105
Eco32I	GATATC	1 cut(s)	1897
Eco47I	GGWCC	5 cut(s)	7, 589, 1384, 1640, 2813
Eco57I	CTGAAG	4 cut(s)	1209, 2171, 2196, 2256
Eco72I	CACGTG	2 cut(s)	13, 24
Eco81I	CCTNAGG	2 cut(s)	95, 1636
EcoO109I	RGGNCCY	1 cut(s)	589
EcoRI	GAATTC	1 cut(s)	980
EcoRII	CCWGG	3 cut(s)	1194, 1554, 2333
EcoRV	GATATC	1 cut(s)	1897
EcoT14I	CCWWGG	3 cut(s)	440, 814, 1802
EcoT22I	ATGCAT	4 cut(s)	966, 1131, 1179, 1996
ErhI	CCWWGG	3 cut(s)	440, 814, 1802
Esp3I	CGTCTC	1 cut(s)	713
FalI	AAGNNNNNCTT	2 cut(s)	1427, 1459
FaqI	GGGAC	1 cut(s)	2553
FauI	CCCGC	3 cut(s)	195, 314, 2530
FauNDI	CATATG	2 cut(s)	1179, 1645
FbaI	TGATCA	1 cut(s)	105
FblI	GTMKAC	2 cut(s)	2467, 2554
Fnu4HI	GCNGC	5 cut(s)	315, 666, 1002, 1256, 1464
FokI	GGATG	9 cut(s)	989, 1088, 1126, 1302, 1337, 2317, 2350, 2801, 2864
Fsp4HI	GCNGC	5 cut(s)	315, 666, 1002, 1256, 1464
FspBI	CTAG	8 cut(s)	86, 365, 503, 875, 926, 1472, 1838, 2280
GlaI	GCGC	1 cut(s)	129
GluI	GCNGC	5 cut(s)	315, 666, 1002, 1256, 1464
GsuI	CTGGAG	2 cut(s)	972, 1071
HaeIII	GGCC	5 cut(s)	230, 439, 1463, 1481, 1903
HapII	CCGG	3 cut(s)	372, 1105, 2546
HgaI	GACGC	3 cut(s)	244, 298, 338
HhaI	GCGC	1 cut(s)	130
Hin1I	GRCGYC	1 cut(s)	255
Hin6I	GCGC	1 cut(s)	128
HinP1I	GCGC	1 cut(s)	128
HincII	GTYRAC	2 cut(s)	562, 1201
HindII	GTYRAC	2 cut(s)	562, 1201
HindIII	AAGCTT	4 cut(s)	801, 1113, 2394, 2434
HpaII	CCGG	3 cut(s)	372, 1105, 2546
HphI	GGTGA	3 cut(s)	191, 1900, 2074
Hpy166II	GTNNAC	9 cut(s)	473, 510, 562, 1022, 1201, 2065, 2468, 2555, 2703
Hpy188III	TCNNGA	5 cut(s)	182, 326, 1638, 1917, 2032
Hpy8I	GTNNAC	9 cut(s)	473, 510, 562, 1022, 1201, 2065, 2468, 2555, 2703
Hpy99I	CGWCG	3 cut(s)	260, 314, 332
HpyAV	CCTTC	9 cut(s)	53, 599, 718, 880, 1554, 1885, 2415, 2420, 2476
HpyCH4III	ACNGT	8 cut(s)	395, 578, 679, 769, 1151, 1159, 1914, 2617
HpyCH4IV	ACGT	6 cut(s)	12, 23, 531, 1507, 1842, 2806
HpyF10VI	GCNNNNNNNGC	8 cut(s)	344, 809, 1046, 1055, 1440, 1487, 1684, 1843
HpySE526I	ACGT	6 cut(s)	12, 23, 531, 1507, 1842, 2806
Hsp92I	GRCGYC	1 cut(s)	255
HspAI	GCGC	1 cut(s)	128
Ksp22I	TGATCA	1 cut(s)	105
Kzo9I	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
LmnI	GCTCC	9 cut(s)	174, 219, 291, 373, 953, 1417, 1495, 1675, 2200
Lsp1109I	GCAGC	3 cut(s)	652, 988, 1242
LweI	GCATC	4 cut(s)	1138, 1148, 1279, 2003
MaeI	CTAG	8 cut(s)	86, 365, 503, 875, 926, 1472, 1838, 2280
MaeII	ACGT	6 cut(s)	12, 23, 531, 1507, 1842, 2806
MaeIII	GTNAC	7 cut(s)	877, 1546, 1580, 1855, 2187, 2212, 2289
MalI	GATC	8 cut(s)	107, 519, 602, 661, 1222, 1633, 2148, 2320
MbiI	CCGCTC	1 cut(s)	190
MboI	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
MflI	RGATCY	5 cut(s)	517, 1220, 1631, 2146, 2318
MhlI	GDGCHC	2 cut(s)	814, 914
MlsI	TGGCCA	2 cut(s)	1481, 1903
MluNI	TGGCCA	2 cut(s)	1481, 1903
MlyI	GAGTC	7 cut(s)	231, 260, 369, 1085, 1979, 2358, 2463
MmeI	TCCRAC	6 cut(s)	71, 196, 696, 1727, 1811, 2332
Mox20I	TGGCCA	2 cut(s)	1481, 1903
Mph1103I	ATGCAT	4 cut(s)	966, 1131, 1179, 1996
MroXI	GAANNNNTTC	1 cut(s)	1564
MscI	TGGCCA	2 cut(s)	1481, 1903
MseI	TTAA	6 cut(s)	1061, 1242, 1280, 2403, 2660, 2871
MslI	CAYNNNNRTG	5 cut(s)	224, 782, 1178, 1506, 1739
Msp20I	TGGCCA	2 cut(s)	1481, 1903
MspA1I	CMGCKG	1 cut(s)	2588
MspI	CCGG	3 cut(s)	372, 1105, 2546
MspR9I	CCNGG	4 cut(s)	372, 1196, 1556, 2335
MvaI	CCWGG	3 cut(s)	1196, 1556, 2335
MvnI	CGCG	4 cut(s)	128, 183, 309, 347
MwoI	GCNNNNNNNGC	8 cut(s)	344, 809, 1046, 1055, 1440, 1487, 1684, 1843
NciI	CCSGG	1 cut(s)	372
NcoI	CCATGG	1 cut(s)	440
NdeI	CATATG	2 cut(s)	1179, 1645
NdeII	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
NlaIV	GGNNCC	8 cut(s)	591, 1192, 1419, 1677, 1732, 1768, 2263, 2814
NmeAIII	GCCGAG	1 cut(s)	2867
NmuCI	GTSAC	4 cut(s)	877, 1580, 2212, 2289
NruI	TCGCGA	1 cut(s)	183
NsiI	ATGCAT	4 cut(s)	966, 1131, 1179, 1996
NspI	RCATGY	3 cut(s)	1008, 1177, 1994
PaeI	GCATGC	1 cut(s)	1994
PdmI	GAANNNNTTC	1 cut(s)	1564
PfeI	GAWTC	4 cut(s)	299, 320, 1591, 2633
Pfl23II	CGTACG	2 cut(s)	433, 528
PflFI	GACNNNGTC	1 cut(s)	269
PkrI	GCNGC	5 cut(s)	316, 667, 1003, 1257, 1465
PleI	GAGTC	7 cut(s)	231, 260, 368, 1085, 1979, 2357, 2463
PmaCI	CACGTG	2 cut(s)	13, 24
PmlI	CACGTG	2 cut(s)	13, 24
PpsI	GAGTC	7 cut(s)	231, 260, 368, 1085, 1979, 2357, 2463
Ppu21I	YACGTR	3 cut(s)	13, 24, 532
PpuMI	RGGWCCY	1 cut(s)	589
PshAI	GACNNNNGTC	1 cut(s)	308
PsiI	TTATAA	2 cut(s)	2165, 2342
Psp1406I	AACGTT	1 cut(s)	2806
Psp5II	RGGWCCY	1 cut(s)	589
Psp6I	CCWGG	3 cut(s)	1194, 1554, 2333
PspCI	CACGTG	2 cut(s)	13, 24
PspGI	CCWGG	3 cut(s)	1194, 1554, 2333
PspLI	CGTACG	2 cut(s)	433, 528
PspN4I	GGNNCC	8 cut(s)	591, 1192, 1419, 1677, 1732, 1768, 2263, 2814
PspPI	GGNCC	5 cut(s)	7, 589, 1384, 1640, 2813
PspPPI	RGGWCCY	1 cut(s)	589
PstI	CTGCAG	1 cut(s)	670
PsuI	RGATCY	5 cut(s)	517, 1220, 1631, 2146, 2318
PsyI	GACNNNGTC	1 cut(s)	269
PvuII	CAGCTG	1 cut(s)	2588
RruI	TCGCGA	1 cut(s)	183
RseI	CAYNNNNRTG	5 cut(s)	224, 782, 1178, 1506, 1739
SaqAI	TTAA	6 cut(s)	1061, 1242, 1280, 2403, 2660, 2871
SatI	GCNGC	5 cut(s)	315, 666, 1002, 1256, 1464
Sau3AI	GATC	8 cut(s)	105, 517, 600, 659, 1220, 1631, 2146, 2318
Sau96I	GGNCC	5 cut(s)	7, 589, 1384, 1640, 2813
ScaI	AGTACT	1 cut(s)	1935
SchI	GAGTC	7 cut(s)	231, 260, 369, 1085, 1979, 2358, 2463
ScrFI	CCNGG	4 cut(s)	372, 1196, 1556, 2335
SduI	GDGCHC	2 cut(s)	814, 914
SfaNI	GCATC	4 cut(s)	1138, 1148, 1279, 2003
SfcI	CTRYAG	1 cut(s)	666
SinI	GGWCC	5 cut(s)	7, 589, 1384, 1640, 2813
SmiMI	CAYNNNNRTG	5 cut(s)	224, 782, 1178, 1506, 1739
SmlI	CTYRAG	6 cut(s)	209, 565, 971, 2266, 2444, 2471
SmoI	CTYRAG	6 cut(s)	209, 565, 971, 2266, 2444, 2471
SphI	GCATGC	1 cut(s)	1994
SsiI	CCGC	9 cut(s)	126, 188, 307, 315, 347, 1387, 1464, 2537, 2706
SspI	AATATT	2 cut(s)	1519, 1533
SspMI	CTAG	8 cut(s)	86, 365, 503, 875, 926, 1472, 1838, 2280
StyD4I	CCNGG	4 cut(s)	370, 1194, 1554, 2333
StyI	CCWWGG	3 cut(s)	440, 814, 1802
TaaI	ACNGT	8 cut(s)	395, 578, 679, 769, 1151, 1159, 1914, 2617
TaiI	ACGT	6 cut(s)	15, 26, 534, 1510, 1845, 2809
TaqI	TCGA	6 cut(s)	150, 264, 302, 327, 603, 1132
TaqII	GACCGA	1 cut(s)	259
TatI	WGTACW	5 cut(s)	472, 1078, 1336, 1909, 1933
TauI	GCSGC	2 cut(s)	317, 1466
TfiI	GAWTC	4 cut(s)	299, 320, 1591, 2633
Tru1I	TTAA	6 cut(s)	1061, 1242, 1280, 2403, 2660, 2871
Tru9I	TTAA	6 cut(s)	1061, 1242, 1280, 2403, 2660, 2871
TscAI	CASTG	6 cut(s)	226, 774, 914, 1029, 1164, 1628
TseFI	GTSAC	4 cut(s)	877, 1580, 2212, 2289
TseI	GCWGC	3 cut(s)	665, 1001, 1255
Tsp45I	GTSAC	4 cut(s)	877, 1580, 2212, 2289
TspGWI	ACGGA	5 cut(s)	133, 421, 516, 567, 608
TspRI	CASTG	6 cut(s)	226, 774, 914, 1029, 1164, 1628
Tth111I	GACNNNGTC	1 cut(s)	269
VpaK11BI	GGWCC	5 cut(s)	7, 589, 1384, 1640, 2813
XapI	RAATTY	6 cut(s)	843, 980, 1303, 1776, 2244, 2369
XceI	RCATGY	3 cut(s)	1008, 1177, 1994
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1760
XmiI	GTMKAC	2 cut(s)	2467, 2554
XmnI	GAANNNNTTC	1 cut(s)	1564
XspI	CTAG	8 cut(s)	86, 365, 503, 875, 926, 1472, 1838, 2280
ZrmI	AGTACT	1 cut(s)	1935
Zsp2I	ATGCAT	4 cut(s)	966, 1131, 1179, 1996

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.