AT3G14920

Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
5017941 .. 5020476
2536 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G14920.1

Sequence Viewer

Length: 1830 bp
ATGACTTCCTCTCTTCCTCCACTCATCTTCTTCTTCACCGTCTTCTTCGTCCACTCTCTCTCCGCCGTCTCCGATCTTCACGAAACCAGATCACGTTTCAAACCTCCTCAGTTCTCTCCTCTCTTCTTCTCCTCTCTTCCCCAAAACGTCACAAAATCCCCTACTCGCTACTTCGAGGTTCAAAAACCTCCCGTTCCAAATCTCCCGACAGCTCAACAACCGTGTTCGTATCAAATCCTCCACCATGACTTTGGCTACACCTACGCTAAACCACCGGTTCTCTCCAATTACACACTCCCCTCTCACTGCTCCTCTCGAGAATTCTCCAAAATCGTCCTCGAATTCAAATCCACCAGCCAAGGAAGACAATTCGATCGTATCTTCGGTGTTTGGCTTGACGGCGTTGAGATTCTCCGGAGCTGCACCGCCGAGCCTAGACCAAACGGAATTGTTTGGTCTGTCGAGAAAGATGTGACCAAGTATCACTCTTTGCTCGTCAAAAACGAGACTCAGATTCTCTCTGTTTATCTTGGTAATCTTATCGATAAAACCTATACTGGTGTTTACCATGTTGATGTCATCTTCCATTTCTATCAATCCGAAAGTAATCTTCAAGATGTTTCTGGTTATAGCTCTTCTAAAGCTGATATGATCCTGCCGATTTCGAGAAATCTTCCGTTGAACGATGGATTGTGGTTTGAAATTGTGAATTCGAATGATACCAAGTATAAGGAGTTTGAGATTCCTAGGAATGTTTATAGAGCTGTGCTTGAGGTTTATGTTTCTTTTCATGAGAATGATGAGTTTTGGTATGGAAATCTTCCTAATGACTATGTTACTGCTAATAATCTTAGTGTTGCTGGTAATGGACCTTTTAGAGAAGTTGTGGTTAGTCTTGACGGTGATATTGCTGGTGCTGTTTGGCCTTTCCCTGTTGTTTTCACCGGTGGGATTAATCCTTTGCTTTGGAGACCAATTACTGCTATTGGCTCTTTTGATTTGCCGAGTTACGATATCGAGATCACGCCGTTCTTGGGAAGTTTGTTAGATGGGAAGACTCATAAGGTGGGGTTTAGTGTTACAAATGCTTTGAATGTTTGGTATATTGATGCGAATTTGCATCTTTGGTTGGATCAAGAGAAGGAGATTGTTGAAGGGAAGGTGTTGGATTTCAGTAGAAGCTCTCTGGAGATTAGCTCTGTCTCGGATTTTAAAGGCTTGAATGGAAACTTCACCACGAAAGCAAAGAGGTCGATAACTTCGGTTGGGTTGGTTAAATCTTCTCATGGGGACATTATAACTAATGCTAATCAAGAATTTAGCTACGAGAACAAGATGGTTTTAGGTAAAGATGGGAACTTGCAGATCATAGATCAATTGATCCAAGCTGATGATCGTATTCATGCCAAGAGAGCCTCCAGAGAGATCTACGCAGCGAAATCTATCAAGAGTTTTCCTTTTTACCTCGACTCTGACACTTTGGAGCAGCAGAATAACACATATCTGGCGGTAGCGAATGTCTCGATGGCATTCAACGAGGAGAGATCAGAGAGCGACAAAGGGTTGATGAGAACGTTTAAGAGCAAGCTTGAAAACAAGCAAGAAGGGCAAGGAGTAATGGTGGTGAAGAATAACTTAGTGGTCAGTGGATATGGAAGCACACAACAAGTGTATAACTATGTTGGAAGTGACCAATGTTACTTCAGAAACATCAGTAGTTACAACTACACTATTCTCTATGACAAGGTTGAATCTGTTTGCAAGAAGAAAACACTGAAGCTGCCTCCACGGCTCGAGCATTTACCAAGACAACACCCCTTACTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

609

Amino Acids

69.0

Weight (kDa)

6.33

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PNGaseA PF12222 70 - 388 8.8e-104 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNGase_A_C PF25156 410 - 487 2.3e-16 PNGase_A C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1298
AccIII TCCGGA 1 cut(s) 414
AciI CCGC 3 cut(s) 63, 426, 1508
AclI AACGTT 1 cut(s) 1574
AclWI GGATC 3 cut(s) 646, 1140, 1375
AcsI RAATTY 5 cut(s) 320, 341, 709, 1114, 1316
AcuI CTGAAG 2 cut(s) 1687, 1796
AfiI CCNNNNNNNGG 1 cut(s) 1034
AgeI ACCGGT 2 cut(s) 274, 944
Alw26I GTCTC 5 cut(s) 73, 500, 964, 1207, 1525
AlwI GGATC 3 cut(s) 646, 1140, 1375
Ama87I CYCGRG 2 cut(s) 315, 1793
Aor13HI TCCGGA 1 cut(s) 414
AoxI GGCC 1 cut(s) 923
ApeKI GCWGC 4 cut(s) 420, 1433, 1486, 1780
ApoI RAATTY 5 cut(s) 320, 341, 709, 1114, 1316
AseI ATTAAT 1 cut(s) 954
AsiGI ACCGGT 2 cut(s) 274, 944
AspA2I CCTAGG 1 cut(s) 746
AspS9I GGNCC 1 cut(s) 869
AsuHPI GGTGA 5 cut(s) 28, 914, 934, 1225, 1636
AsuII TTCGAA 1 cut(s) 713
AvaI CYCGRG 2 cut(s) 315, 1793
AvaII GGWCC 1 cut(s) 869
AvrII CCTAGG 1 cut(s) 746
BbsI GAAGAC 3 cut(s) 34, 370, 1061
BbvI GCAGC 4 cut(s) 407, 1445, 1498, 1767
BccI CCATC 5 cut(s) 680, 1043, 1330, 1346, 1519
BceAI ACGGC 4 cut(s) 50, 415, 1012, 1805
BcgI CGANNNNNNTGC 2 cut(s) 1233, 1267
BcoDI GTCTC 5 cut(s) 73, 500, 964, 1207, 1525
BfaI CTAG 2 cut(s) 435, 747
BglI GCCNNNNNGGC 1 cut(s) 1789
BglII AGATCT 1 cut(s) 1425
BisI GCNGC 4 cut(s) 421, 1434, 1487, 1781
BlnI CCTAGG 1 cut(s) 746
BlsI GCNGC 4 cut(s) 422, 1435, 1488, 1782
Bme18I GGWCC 1 cut(s) 869
BmeT110I CYCGRG 2 cut(s) 315, 1793
BmgT120I GGNCC 1 cut(s) 869
BmsI GCATC 2 cut(s) 1099, 1129
BpiI GAAGAC 3 cut(s) 34, 370, 1061
BplI GAGNNNNNCTC 2 cut(s) 1181, 1213
BpmI CTGGAG 2 cut(s) 1208, 1402
Bpu14I TTCGAA 1 cut(s) 713
BpuEI CTTGAG 1 cut(s) 791
Bsa29I ATCGAT 1 cut(s) 543
BsaI GGTCTC 1 cut(s) 964
BsaJI CCNNGG 3 cut(s) 358, 746, 1787
BsaWI WCCGGW 3 cut(s) 274, 414, 944
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 1605, 1635
Bsc4I CCNNNNNNNGG 1 cut(s) 1034
Bse118I RCCGGY 2 cut(s) 274, 944
Bse1I ACTGG 1 cut(s) 562
BseAI TCCGGA 1 cut(s) 414
BseCI ATCGAT 1 cut(s) 543
BseDI CCNNGG 3 cut(s) 358, 746, 1787
BseLI CCNNNNNNNGG 1 cut(s) 1034
BseMII CTCAG 2 cut(s) 122, 524
BseNI ACTGG 1 cut(s) 562
BseRI GAGGAG 5 cut(s) 96, 108, 121, 301, 1553
BseXI GCAGC 4 cut(s) 407, 1445, 1498, 1767
BsgI GTGCAG 1 cut(s) 406
Bsh1285I CGRYCG 1 cut(s) 376
BshFI GGCC 1 cut(s) 925
BshTI ACCGGT 2 cut(s) 274, 944
BshVI ATCGAT 1 cut(s) 543
BsiEI CGRYCG 1 cut(s) 376
BsiHKCI CYCGRG 2 cut(s) 315, 1793
BsiSI CCGG 3 cut(s) 275, 415, 945
BslFI GGGAC 1 cut(s) 1304
BslI CCNNNNNNNGG 1 cut(s) 1034
BsmAI GTCTC 5 cut(s) 73, 500, 964, 1207, 1525
BsmBI CGTCTC 1 cut(s) 73
BsmFI GGGAC 1 cut(s) 1304
BsmI GAATGC 1 cut(s) 1529
BsnI GGCC 1 cut(s) 925
Bso31I GGTCTC 1 cut(s) 964
BsoBI CYCGRG 2 cut(s) 315, 1793
Bsp119I TTCGAA 1 cut(s) 713
Bsp13I TCCGGA 1 cut(s) 414
BspACI CCGC 3 cut(s) 63, 426, 1508
BspANI GGCC 1 cut(s) 925
BspCNI CTCAG 2 cut(s) 121, 523
BspDI ATCGAT 1 cut(s) 543
BspEI TCCGGA 1 cut(s) 414
BspHI TCATGA 1 cut(s) 790
BspPI GGATC 3 cut(s) 646, 1140, 1375
BspQI GCTCTTC 1 cut(s) 640
BspT104I TTCGAA 1 cut(s) 713
BspTNI GGTCTC 1 cut(s) 964
BsrFI RCCGGY 2 cut(s) 274, 944
BsrI ACTGG 1 cut(s) 562
BssAI RCCGGY 2 cut(s) 274, 944
BssECI CCNNGG 3 cut(s) 358, 746, 1787
BssT1I CCWWGG 2 cut(s) 358, 746
Bst4CI ACNGT 3 cut(s) 40, 222, 902
Bst6I CTCTTC 4 cut(s) 18, 128, 141, 640
BstBI TTCGAA 1 cut(s) 713
BstC8I GCNNGC 1 cut(s) 1586
BstDEI CTNAG 4 cut(s) 108, 510, 851, 1636
BstDSI CCRYGG 1 cut(s) 1787
BstMAI GTCTC 5 cut(s) 73, 500, 964, 1207, 1525
BstMCI CGRYCG 1 cut(s) 376
BstMWI GCNNNNNNNGC 3 cut(s) 1412, 1606, 1789
BstV1I GCAGC 4 cut(s) 407, 1445, 1498, 1767
BstV2I GAAGAC 3 cut(s) 34, 370, 1061
BstX2I RGATCY 1 cut(s) 1425
BstXI CCANNNNNNTGG 1 cut(s) 251
BstYI RGATCY 1 cut(s) 1425
Bsu15I ATCGAT 1 cut(s) 543
BsuRI GGCC 1 cut(s) 925
BsuTUI ATCGAT 1 cut(s) 543
BtgI CCRYGG 1 cut(s) 1787
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 3 cut(s) 304, 1651, 1772
Cac8I GCNNGC 1 cut(s) 1586
CciI TCATGA 1 cut(s) 790
Cfr10I RCCGGY 2 cut(s) 274, 944
Cfr13I GGNCC 1 cut(s) 869
ClaI ATCGAT 1 cut(s) 543
CspAI ACCGGT 2 cut(s) 274, 944
CviAII CATG 5 cut(s) 245, 569, 791, 1286, 1403
DdeI CTNAG 4 cut(s) 108, 510, 851, 1636
DraI TTTAAA 1 cut(s) 1213
Eam1104I CTCTTC 4 cut(s) 18, 128, 141, 640
EarI CTCTTC 4 cut(s) 18, 128, 141, 640
EciI GGCGGA 1 cut(s) 52
Eco130I CCWWGG 2 cut(s) 358, 746
Eco31I GGTCTC 1 cut(s) 964
Eco32I GATATC 1 cut(s) 1015
Eco47I GGWCC 1 cut(s) 869
Eco57I CTGAAG 2 cut(s) 1687, 1796
Eco88I CYCGRG 2 cut(s) 315, 1793
EcoRI GAATTC 3 cut(s) 320, 341, 709
EcoRV GATATC 1 cut(s) 1015
EcoT14I CCWWGG 2 cut(s) 358, 746
ErhI CCWWGG 2 cut(s) 358, 746
Esp3I CGTCTC 1 cut(s) 73
FaeI CATG 5 cut(s) 248, 572, 794, 1289, 1406
FalI AAGNNNNNCTT 2 cut(s) 1619, 1651
FaqI GGGAC 1 cut(s) 1304
FatI CATG 5 cut(s) 244, 568, 790, 1285, 1402
Fnu4HI GCNGC 4 cut(s) 421, 1434, 1487, 1781
Fsp4HI GCNGC 4 cut(s) 421, 1434, 1487, 1781
FspBI CTAG 2 cut(s) 435, 747
GluI GCNGC 4 cut(s) 421, 1434, 1487, 1781
GsuI CTGGAG 2 cut(s) 1208, 1402
HaeIII GGCC 1 cut(s) 925
HapII CCGG 3 cut(s) 275, 415, 945
Hin1II CATG 5 cut(s) 248, 572, 794, 1289, 1406
HindIII AAGCTT 1 cut(s) 1586
HinfI GANTC 7 cut(s) 409, 508, 514, 742, 1057, 1469, 1751
HpaII CCGG 3 cut(s) 275, 415, 945
HphI GGTGA 5 cut(s) 28, 914, 934, 1225, 1636
Hpy166II GTNNAC 2 cut(s) 52, 565
Hpy188I TCNGA 7 cut(s) 73, 513, 601, 1207, 1474, 1549, 1706
Hpy8I GTNNAC 2 cut(s) 52, 565
HpyAV CCTTC 4 cut(s) 1135, 1148, 1153, 1598
HpyCH4III ACNGT 3 cut(s) 40, 222, 902
HpyCH4IV ACGT 3 cut(s) 94, 147, 1574
HpyCH4V TGCA 4 cut(s) 423, 1120, 1363, 1761
HpyF10VI GCNNNNNNNGC 3 cut(s) 1412, 1606, 1789
HpyF3I CTNAG 4 cut(s) 108, 510, 851, 1636
HpySE526I ACGT 3 cut(s) 94, 147, 1574
Hsp92II CATG 5 cut(s) 248, 572, 794, 1289, 1406
Kpn2I TCCGGA 1 cut(s) 414
LguI GCTCTTC 1 cut(s) 640
LmnI GCTCC 3 cut(s) 314, 417, 1483
Lsp1109I GCAGC 4 cut(s) 407, 1445, 1498, 1767
LweI GCATC 2 cut(s) 1099, 1129
MaeI CTAG 2 cut(s) 435, 747
MaeII ACGT 3 cut(s) 94, 147, 1574
MaeIII GTNAC 8 cut(s) 148, 472, 835, 1007, 1078, 1688, 1697, 1718
MfeI CAATTG 1 cut(s) 1376
MflI RGATCY 1 cut(s) 1425
MlyI GAGTC 3 cut(s) 502, 1051, 1463
MmeI TCCRAC 3 cut(s) 1110, 1146, 1663
MroI TCCGGA 1 cut(s) 414
MseI TTAA 4 cut(s) 954, 1212, 1275, 1578
MslI CAYNNNNRTG 2 cut(s) 573, 795
MspI CCGG 3 cut(s) 275, 415, 945
MunI CAATTG 1 cut(s) 1376
Mva1269I GAATGC 1 cut(s) 1529
MwoI GCNNNNNNNGC 3 cut(s) 1412, 1606, 1789
NlaIII CATG 5 cut(s) 248, 572, 794, 1289, 1406
NmeAIII GCCGAG 2 cut(s) 454, 1029
NmuCI GTSAC 3 cut(s) 148, 472, 1688
NspV TTCGAA 1 cut(s) 713
PaeR7I CTCGAG 2 cut(s) 315, 1793
PagI TCATGA 1 cut(s) 790
PciSI GCTCTTC 1 cut(s) 640
PcsI WCGNNNNNNNCGW 1 cut(s) 501
PctI GAATGC 1 cut(s) 1529
PfeI GAWTC 4 cut(s) 409, 514, 742, 1751
PinAI ACCGGT 2 cut(s) 274, 944
PkrI GCNGC 4 cut(s) 422, 1435, 1488, 1782
Ple19I CGATCG 1 cut(s) 376
PleI GAGTC 3 cut(s) 502, 1051, 1463
PpsI GAGTC 3 cut(s) 502, 1051, 1463
PshBI ATTAAT 1 cut(s) 954
PsiI TTATAA 1 cut(s) 1298
Psp1406I AACGTT 1 cut(s) 1574
PspPI GGNCC 1 cut(s) 869
PspXI VCTCGAGB 1 cut(s) 1793
PsuI RGATCY 1 cut(s) 1425
PvuI CGATCG 1 cut(s) 376
RseI CAYNNNNRTG 2 cut(s) 573, 795
SapI GCTCTTC 1 cut(s) 640
SaqAI TTAA 4 cut(s) 954, 1212, 1275, 1578
SatI GCNGC 4 cut(s) 421, 1434, 1487, 1781
Sau96I GGNCC 1 cut(s) 869
SchI GAGTC 3 cut(s) 502, 1051, 1463
SfaNI GCATC 2 cut(s) 1099, 1129
Sfr274I CTCGAG 2 cut(s) 315, 1793
SfuI TTCGAA 1 cut(s) 713
SgrAI CRCCGGYG 1 cut(s) 944
SinI GGWCC 1 cut(s) 869
SlaI CTCGAG 2 cut(s) 315, 1793
SmiMI CAYNNNNRTG 2 cut(s) 573, 795
SmlI CTYRAG 3 cut(s) 315, 770, 1793
SmoI CTYRAG 3 cut(s) 315, 770, 1793
SsiI CCGC 3 cut(s) 63, 426, 1508
SspMI CTAG 2 cut(s) 435, 747
StyI CCWWGG 2 cut(s) 358, 746
TaaI ACNGT 3 cut(s) 40, 222, 902
TaiI ACGT 3 cut(s) 97, 150, 1577
TfiI GAWTC 4 cut(s) 409, 514, 742, 1751
Tru1I TTAA 4 cut(s) 954, 1212, 1275, 1578
Tru9I TTAA 4 cut(s) 954, 1212, 1275, 1578
TscAI CASTG 3 cut(s) 311, 1651, 1779
TseFI GTSAC 3 cut(s) 148, 472, 1688
TseI GCWGC 4 cut(s) 420, 1433, 1486, 1780
Tsp45I GTSAC 3 cut(s) 148, 472, 1688
TspDTI ATGAA 2 cut(s) 779, 1391
TspGWI ACGGA 2 cut(s) 459, 666
TspRI CASTG 3 cut(s) 311, 1651, 1779
VpaK11BI GGWCC 1 cut(s) 869
VspI ATTAAT 1 cut(s) 954
XapI RAATTY 5 cut(s) 320, 341, 709, 1114, 1316
XcmI CCANNNNNNNNNTGG 1 cut(s) 248
XhoI CTCGAG 2 cut(s) 315, 1793
XmaJI CCTAGG 1 cut(s) 746
XspI CTAG 2 cut(s) 435, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.