Rroxscaffold_1G00049320

peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
69509036 .. 69510826
1791 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00049320.1

Sequence Viewer

Length: 1791 bp
ATGGCTTCTCTGTTGCATCTCCTCTTCTTCCTTTTCCTTCAACCTCTCTTCTCCATTGCCAACGTCCACAAACTCAACCAACTCAGATCAGAGCTCATCTCCCAACCCACTTCTCTCAATGACACCCCACCAACCCTATACTTTGAAGTAACCAAACCCATTAAACTACCCAAAACCAAGCCTTGTTCCCAGCTCATTCTCCAGCATGACTTTGCCTACACTTATGGAAAAGCCCCAGTCTTTGCTAACTACCACCCTCCCTCAAATTGCCCATCTCAGAATTTCTCCAAGATTGTTCTTGAATGGAAAGCTACAAGCAAAGGAAGGCAATTTGACCGCATTTTTGGGGTTTGGCTTTCTGGGGTTGAGCTTCTCAGGAGCTGCACCGCAGAGCCGAGGCCTAATGGGATTGTTTGGAGTGTTGAGAAGGACATCACCAGGTACTATTCATTACTCCAGAAGAATCAGACACTTGCTGTTTATCTTGGCAATTTGATTGATAAAACCTATACTGGCGTTTACCATGTCAATGTTAGTATTCATTTTTATCCTGCTGAAGAGAACTTGATTGATCATGACCAAAAGTTGGGGAATTTGGCATCTTGGGCAGATTTGATTCTGCCCATTTCTAGAAATTTGCCTTTGAAGGAAGGGTTGTGGTTTGAAATTGAGAATTCAACTGATACCAAGTTGAAGGAATTTGAGATTCCTCGAAATGCTTATAGGGCTGTGTTGGAAGTGTATGTTTCCTTTCATGAGAATGATGAATCCTGGTATGCAAATCCTACTAATGAGTACATTGATGCAAACAACCTTAGCGTGCCAGGAAATGGACCTTTTAGGGAGGTTGTGGTCAGTATAGATGGTCATGTTGTTGGTGCTGTGTGGCCTTTTACAGTGATATTCACAGGAGGGGTCAATCCTCTCCTGTGGCGACCCATTACTGCAATTGGCTCATACGATCTTCCTTCTTATGACATCGAAATCACACCGTTTTTGGGGAACATATTGGATGGGAAGAGCCACAAGATTGGGTTTAATGTTACAAATGCCTTGAATGTTTGGTACATAGATGCAAATTTGCATATATGGTTGGACAAACAGAGCAGAAGAACTGAGGGACAGCTTGTGAAGCACACAAGCTTGCCCCTTGTTATTTCACTGGTGTCAGATTTCAAGGGTTTAAATGGCACATTTATCACAAGGGTGAGCAGGTCTGTCTCATCAACTGGGTGGGTGAAGTCATCGAATGGGAATATTACAACCCAGTCAATTCAAAAATTTTACTACAGTAATACAATGGTCATGGGGAATAATGGTGATGTGCAGATAGTGAACCAGAACATCCATTTCAATGACACTGTTCATATCATGCCGCCTTCCTCCATCGTTCACTCACTCTCATCACACAAAACATTTCCCCTTTACTTGTACACTGACTACTTGGAACAAAAAAATAATACATATTTATTGGTGACAAATGTCAGTCTGGGAGTCATTGAGAAGAAAACTGCTAGTGCTGGTTCTCGATTCATGAAGAGCTCTCTCAGAAATTTGCAGAATGCAGAGGGTCATATGGTTGTAAAAGATAATTTGGTAGTCAGTGGGGTCGGGAATACACAGCAAATGTACAGATATCATGGTGGAAAATTCTGTTACTTTAGGAATATAAGCAGCTCAAACTACACCATACTTTATGATAAGGTTGAGAATACATGCAACAACAAACCAAAGTCTAACTGGGATTTTGGTTTGAGAAGACTGTGGCCTTTTGGTGCTGGATTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

596

Amino Acids

67.57

Weight (kDa)

8.75

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PNGaseA PF12222 59 - 379 3.1e-105 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNGase_A_C PF25156 398 - 475 2.5e-22 PNGase_A C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1203
AccB7I CCANNNNNTGG 2 cut(s) 586, 830
AciI CCGC 3 cut(s) 337, 387, 1376
AcsI RAATTY 9 cut(s) 280, 592, 634, 673, 698, 1078, 1280, 1552, 1649
AcuI CTGAAG 1 cut(s) 576
AfaI GTAC 5 cut(s) 443, 797, 1067, 1433, 1631
AfiI CCNNNNNNNGG 3 cut(s) 586, 830, 998
AjnI CCWGG 3 cut(s) 437, 770, 823
AleI CACNNNNGTG 1 cut(s) 1205
AluBI AGCT 9 cut(s) 94, 193, 311, 370, 381, 1126, 1143, 1542, 1677
AluI AGCT 9 cut(s) 94, 193, 311, 370, 381, 1126, 1143, 1542, 1677
Alw21I GWGCWC 2 cut(s) 96, 1544
Alw26I GTCTC 1 cut(s) 1225
AlwNI CAGNNNCTG 1 cut(s) 381
AoxI GGCC 3 cut(s) 398, 887, 1766
ApeKI GCWGC 2 cut(s) 381, 1674
ApoI RAATTY 9 cut(s) 280, 592, 634, 673, 698, 1078, 1280, 1552, 1649
ArsI GACNNNNNNTTYG 2 cut(s) 326, 358
AspS9I GGNCC 1 cut(s) 833
AsuHPI GGTGA 5 cut(s) 427, 1219, 1249, 1331, 1486
AvaII GGWCC 1 cut(s) 833
BanII GRGCYC 2 cut(s) 96, 1544
BbsI GAAGAC 1 cut(s) 1765
Bbv12I GWGCWC 2 cut(s) 96, 1544
BbvI GCAGC 2 cut(s) 368, 1686
BccI CCATC 4 cut(s) 280, 857, 1007, 1394
BciT130I CCWGG 3 cut(s) 439, 772, 825
BclI TGATCA 1 cut(s) 571
BcoDI GTCTC 1 cut(s) 1225
BfaI CTAG 2 cut(s) 630, 1515
BfmI CTRYAG 1 cut(s) 1288
BfuAI ACCTGC 1 cut(s) 1203
BisI GCNGC 3 cut(s) 382, 1376, 1675
BlsI GCNGC 3 cut(s) 383, 1377, 1676
Bme1390I CCNGG 3 cut(s) 439, 772, 825
Bme18I GGWCC 1 cut(s) 833
BmgT120I GGNCC 1 cut(s) 833
BmrFI CCNGG 3 cut(s) 439, 772, 825
BmrI ACTGGG 4 cut(s) 230, 1239, 1261, 1750
BmsI GCATC 4 cut(s) 25, 608, 793, 1063
BmuI ACTGGG 4 cut(s) 230, 1239, 1261, 1750
BoxI GACNNNNGTC 1 cut(s) 1481
BpiI GAAGAC 1 cut(s) 1765
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BpmI CTGGAG 2 cut(s) 185, 440
Bpu10I CCTNAGC 1 cut(s) 815
BsaJI CCNNGG 1 cut(s) 395
Bsc4I CCNNNNNNNGG 3 cut(s) 586, 830, 998
Bse1I ACTGG 6 cut(s) 236, 517, 1167, 1234, 1267, 1745
Bse3DI GCAATG 1 cut(s) 54
BseBI CCWGG 3 cut(s) 439, 772, 825
BseDI CCNNGG 1 cut(s) 395
BseGI GGATG 2 cut(s) 1018, 1344
BseLI CCNNNNNNNGG 3 cut(s) 586, 830, 998
BseMI GCAATG 1 cut(s) 54
BseMII CTCAG 5 cut(s) 97, 290, 388, 1107, 1561
BseNI ACTGG 6 cut(s) 236, 517, 1167, 1234, 1267, 1745
BseRI GAGGAG 1 cut(s) 11
BseXI GCAGC 2 cut(s) 368, 1686
BseYI CCCAGC 1 cut(s) 189
BsgI GTGCAG 2 cut(s) 367, 1346
BshFI GGCC 3 cut(s) 400, 889, 1768
BsiHKAI GWGCWC 2 cut(s) 96, 1544
BslFI GGGAC 1 cut(s) 1134
BslI CCNNNNNNNGG 3 cut(s) 586, 830, 998
BsmAI GTCTC 1 cut(s) 1225
BsmFI GGGAC 1 cut(s) 1134
BsmI GAATGC 1 cut(s) 1567
BsnI GGCC 3 cut(s) 400, 889, 1768
Bsp1286I GDGCHC 2 cut(s) 96, 1544
Bsp1407I TGTACA 2 cut(s) 1431, 1629
Bsp143I GATC 3 cut(s) 86, 571, 961
BspACI CCGC 3 cut(s) 337, 387, 1376
BspANI GGCC 3 cut(s) 400, 889, 1768
BspCNI CTCAG 5 cut(s) 96, 289, 387, 1108, 1560
BspHI TCATGA 3 cut(s) 574, 754, 1533
BspMI ACCTGC 1 cut(s) 1203
BspQI GCTCTTC 2 cut(s) 1013, 1532
BsrDI GCAATG 1 cut(s) 54
BsrGI TGTACA 2 cut(s) 1431, 1629
BsrI ACTGG 6 cut(s) 236, 517, 1167, 1234, 1267, 1745
BssECI CCNNGG 1 cut(s) 395
BssMI GATC 3 cut(s) 86, 571, 961
Bst2UI CCWGG 3 cut(s) 439, 772, 825
Bst4CI ACNGT 5 cut(s) 898, 993, 1292, 1363, 1764
Bst6I CTCTTC 5 cut(s) 29, 53, 552, 1013, 1532
BstAUI TGTACA 2 cut(s) 1431, 1629
BstC8I GCNNGC 2 cut(s) 821, 1145
BstDEI CTNAG 6 cut(s) 83, 276, 374, 815, 1116, 1547
BstF5I GGATG 2 cut(s) 1018, 1344
BstKTI GATC 3 cut(s) 89, 574, 964
BstMAI GTCTC 1 cut(s) 1225
BstMBI GATC 3 cut(s) 86, 571, 961
BstMWI GCNNNNNNNGC 3 cut(s) 605, 725, 1132
BstNI CCWGG 3 cut(s) 439, 772, 825
BstNSI RCATGY 1 cut(s) 1719
BstPAI GACNNNNGTC 1 cut(s) 1481
BstSCI CCNGG 3 cut(s) 437, 770, 823
BstSFI CTRYAG 1 cut(s) 1288
BstV1I GCAGC 2 cut(s) 368, 1686
BstV2I GAAGAC 1 cut(s) 1765
BstXI CCANNNNNNTGG 1 cut(s) 1031
BsuRI GGCC 3 cut(s) 400, 889, 1768
BtsCI GGATG 2 cut(s) 1018, 1344
BtsIMutI CAGTG 5 cut(s) 903, 1160, 1359, 1434, 1609
BveI ACCTGC 1 cut(s) 1203
Cac8I GCNNGC 2 cut(s) 821, 1145
CaiI CAGNNNCTG 1 cut(s) 381
CciI TCATGA 3 cut(s) 574, 754, 1533
Cfr13I GGNCC 1 cut(s) 833
CsiI ACCWGGT 1 cut(s) 437
Csp6I GTAC 5 cut(s) 442, 796, 1066, 1432, 1630
CviQI GTAC 5 cut(s) 442, 796, 1066, 1432, 1630
DdeI CTNAG 6 cut(s) 83, 276, 374, 815, 1116, 1547
DpnI GATC 3 cut(s) 88, 573, 963
DpnII GATC 3 cut(s) 86, 571, 961
DraI TTTAAA 1 cut(s) 1185
Eam1104I CTCTTC 5 cut(s) 29, 53, 552, 1013, 1532
EarI CTCTTC 5 cut(s) 29, 53, 552, 1013, 1532
Ecl136II GAGCTC 2 cut(s) 94, 1542
Eco147I AGGCCT 1 cut(s) 400
Eco24I GRGCYC 2 cut(s) 96, 1544
Eco32I GATATC 1 cut(s) 1637
Eco47I GGWCC 1 cut(s) 833
Eco53kI GAGCTC 2 cut(s) 94, 1542
Eco57I CTGAAG 1 cut(s) 576
EcoICRI GAGCTC 2 cut(s) 94, 1542
EcoRI GAATTC 1 cut(s) 673
EcoRII CCWGG 3 cut(s) 437, 770, 823
EcoRV GATATC 1 cut(s) 1637
EcoT38I GRGCYC 2 cut(s) 96, 1544
FaqI GGGAC 1 cut(s) 1134
FauNDI CATATG 1 cut(s) 1575
FbaI TGATCA 1 cut(s) 571
Fnu4HI GCNGC 3 cut(s) 382, 1376, 1675
FokI GGATG 2 cut(s) 1025, 1331
FriOI GRGCYC 2 cut(s) 96, 1544
Fsp4HI GCNGC 3 cut(s) 382, 1376, 1675
FspBI CTAG 2 cut(s) 630, 1515
GluI GCNGC 3 cut(s) 382, 1376, 1675
GsaI CCCAGC 1 cut(s) 193
GsuI CTGGAG 2 cut(s) 185, 440
HaeIII GGCC 3 cut(s) 400, 889, 1768
HindIII AAGCTT 1 cut(s) 1141
HinfI GANTC 6 cut(s) 463, 616, 706, 767, 1494, 1530
HphI GGTGA 5 cut(s) 427, 1219, 1249, 1331, 1486
Hpy166II GTNNAC 5 cut(s) 67, 520, 1336, 1393, 1434
Hpy188I TCNGA 6 cut(s) 86, 91, 279, 468, 1171, 1550
Hpy188III TCNNGA 9 cut(s) 299, 376, 457, 575, 630, 755, 1527, 1534, 1612
Hpy8I GTNNAC 5 cut(s) 67, 520, 1336, 1393, 1434
HpyAV CCTTC 8 cut(s) 47, 318, 421, 640, 644, 688, 978, 1389
HpyCH4III ACNGT 5 cut(s) 898, 993, 1292, 1363, 1764
HpyCH4IV ACGT 1 cut(s) 63
HpyF10VI GCNNNNNNNGC 3 cut(s) 605, 725, 1132
HpyF3I CTNAG 6 cut(s) 83, 276, 374, 815, 1116, 1547
HpySE526I ACGT 1 cut(s) 63
Ksp22I TGATCA 1 cut(s) 571
Kzo9I GATC 3 cut(s) 86, 571, 961
LguI GCTCTTC 2 cut(s) 1013, 1532
LmnI GCTCC 1 cut(s) 378
Lsp1109I GCAGC 2 cut(s) 368, 1686
LweI GCATC 4 cut(s) 25, 608, 793, 1063
MabI ACCWGGT 1 cut(s) 437
MaeI CTAG 2 cut(s) 630, 1515
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 4 cut(s) 148, 1042, 1474, 1655
MalI GATC 3 cut(s) 88, 573, 963
MboI GATC 3 cut(s) 86, 571, 961
MfeI CAATTG 1 cut(s) 948
MhlI GDGCHC 2 cut(s) 96, 1544
MlyI GAGTC 1 cut(s) 1503
MmeI TCCRAC 2 cut(s) 714, 1074
MseI TTAA 3 cut(s) 162, 1038, 1184
MslI CAYNNNNRTG 4 cut(s) 528, 759, 1205, 1353
MspR9I CCNGG 3 cut(s) 439, 772, 825
MunI CAATTG 1 cut(s) 948
Mva1269I GAATGC 1 cut(s) 1567
MvaI CCWGG 3 cut(s) 439, 772, 825
MwoI GCNNNNNNNGC 3 cut(s) 605, 725, 1132
NdeI CATATG 1 cut(s) 1575
NdeII GATC 3 cut(s) 86, 571, 961
NmeAIII GCCGAG 1 cut(s) 420
NmuCI GTSAC 1 cut(s) 1474
NspI RCATGY 1 cut(s) 1719
OliI CACNNNNGTG 1 cut(s) 1205
PagI TCATGA 3 cut(s) 574, 754, 1533
PceI AGGCCT 1 cut(s) 400
PciSI GCTCTTC 2 cut(s) 1013, 1532
PctI GAATGC 1 cut(s) 1567
PfeI GAWTC 5 cut(s) 463, 616, 706, 767, 1530
PflMI CCANNNNNTGG 2 cut(s) 586, 830
PkrI GCNGC 3 cut(s) 383, 1377, 1676
PleI GAGTC 1 cut(s) 1502
PpsI GAGTC 1 cut(s) 1502
PshAI GACNNNNGTC 1 cut(s) 1481
Psp124BI GAGCTC 2 cut(s) 96, 1544
Psp6I CCWGG 3 cut(s) 437, 770, 823
PspFI CCCAGC 1 cut(s) 189
PspGI CCWGG 3 cut(s) 437, 770, 823
PspPI GGNCC 1 cut(s) 833
PstNI CAGNNNCTG 1 cut(s) 381
RsaI GTAC 5 cut(s) 443, 797, 1067, 1433, 1631
RsaNI GTAC 5 cut(s) 442, 796, 1066, 1432, 1630
RseI CAYNNNNRTG 4 cut(s) 528, 759, 1205, 1353
SacI GAGCTC 2 cut(s) 96, 1544
SapI GCTCTTC 2 cut(s) 1013, 1532
SaqAI TTAA 3 cut(s) 162, 1038, 1184
SatI GCNGC 3 cut(s) 382, 1376, 1675
Sau3AI GATC 3 cut(s) 86, 571, 961
Sau96I GGNCC 1 cut(s) 833
SchI GAGTC 1 cut(s) 1503
ScrFI CCNGG 3 cut(s) 439, 772, 825
SduI GDGCHC 2 cut(s) 96, 1544
SexAI ACCWGGT 1 cut(s) 437
SfaNI GCATC 4 cut(s) 25, 608, 793, 1063
SfcI CTRYAG 1 cut(s) 1288
SinI GGWCC 1 cut(s) 833
SmiMI CAYNNNNRTG 4 cut(s) 528, 759, 1205, 1353
SseBI AGGCCT 1 cut(s) 400
SsiI CCGC 3 cut(s) 337, 387, 1376
SspI AATATT 1 cut(s) 1258
SspMI CTAG 2 cut(s) 630, 1515
SstI GAGCTC 2 cut(s) 96, 1544
StuI AGGCCT 1 cut(s) 400
StyD4I CCNGG 3 cut(s) 437, 770, 823
TaaI ACNGT 5 cut(s) 898, 993, 1292, 1363, 1764
TaiI ACGT 1 cut(s) 66
TaqI TCGA 4 cut(s) 712, 981, 1247, 1528
TatI WGTACW 3 cut(s) 795, 1431, 1629
TauI GCSGC 1 cut(s) 1378
TfiI GAWTC 5 cut(s) 463, 616, 706, 767, 1530
Tru1I TTAA 3 cut(s) 162, 1038, 1184
Tru9I TTAA 3 cut(s) 162, 1038, 1184
TscAI CASTG 5 cut(s) 903, 1167, 1366, 1441, 1609
TseFI GTSAC 1 cut(s) 1474
TseI GCWGC 2 cut(s) 381, 1674
Tsp45I GTSAC 1 cut(s) 1474
TspDTI ATGAA 7 cut(s) 438, 530, 743, 780, 1355, 1522, 1550
TspRI CASTG 5 cut(s) 903, 1167, 1366, 1441, 1609
Van91I CCANNNNNTGG 2 cut(s) 586, 830
VpaK11BI GGWCC 1 cut(s) 833
XapI RAATTY 9 cut(s) 280, 592, 634, 673, 698, 1078, 1280, 1552, 1649
XbaI TCTAGA 1 cut(s) 629
XceI RCATGY 1 cut(s) 1719
XcmI CCANNNNNNNNNTGG 1 cut(s) 1737
XspI CTAG 2 cut(s) 630, 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.