RLG00000033274

peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
25152267 .. 25154402
2136 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033274

Sequence Viewer

Length: 1791 bp
ATGGCTTCCCTGTTGCATCTCCTCTTCTTCCTTTTCCTTCAACCTCTCTTCTCCATTGCCAATGTCCACAAACTCAACCAACTCAGATCAGAGCTCATCTCCCAACACACTTCTCTCAATGACACCCCACCAACCCTTTACTTTGAAGTAACCAAACCCATTAGACTACCCAAAACCAAGCCTTGTTCCCAGCTCATTCTCCAGCATGACTTTGCCTACACTTATGGAAAAGCCCCAGTCTTTGCTAACTACCACCCTCCCTCAAATTGCCCATCTCAGAATTTCTCCAAGATTGTTCTTGAATGGAAAGCTACAAGCAAAGGAAGGCAATTTGACCGCATTTTTGGGGTTTGGCTTTCTGGGGTTGAGCTTCTCAGGAGCTGCACCGCAGAGCCAAGGCCTAATGGGATTGTTTGGAGTGTTGAGAAGGACATCACCAGGTACTATTCATTACTCCAGAAGAATCAGACACTTGCTGTTTATCTTGGCAATTTGATTGATAAAACCTATACTGGGGTTTACCATGTCAATGTTAGTATTCATTTTTATCCTGCTGAAGAGAACTTGATTGATCATGACCAAAAGTTGGGGAATTTGGCATCTTGGGCGGATTTGATTCTGCCCATTTCTAGAAATTTGCCTTTGAAGGATGGGTTGTGGTTTGAAATTGAGAATTCAACTGATACCAAGTTGAAGGAATTTGAGATTCCTCGAAATGCTTATAGGGCTTTGTTGGAAGTGTATGTTTCCTTTCATGAGAATGATGAATCCTGGTATGCAAATCCTACTAATGAGTACATTGCTGCAAACAACCTTAGCGTGCCCGGAAATGGACCATTTAGGGAGGTTGTGGTCAGTATAGATGGTCATGTTGTTGGTGCTGTGTGGCCTTTTACAGTGATATTCACAGGAGGGGTCAATCCTCTCCTGTGGCGACCCATTACTGCAATTGGCTCATACGATCTTCCTTCTTATGACATCGAAATCACACCGTTTTTAGGGAACATATTGGATGGGAAGAGCCACAAGATAGGGTTTAATGTTACAAATGCCTTGAATGTTTGGTACATAGATGCAAATTTGCATATATGGTTGGACAAACAGAGCAGAAGAACTGAGGGACAGCTTGTGAAGCACACAAGCTGGCCCCTTGTTATTTCACTGGTGTCAGATTTCAAGGGTTTAAATGGCACATTTATCACAAGGGTGAGCAGGTCTGTCTCATCAACTGGGTGGGTGAAGTCATCGAATGGGAATATTACAACCCAGTCAAATCAAAAATTTTACTACAGTAATACAATGGTCATGGGGAATAATGGTGATGTGCAGATAGTGAACCAGAACATCCATTTCAATGACACTGTTCATATCATGCCGCCTTCCTCCATCGTTCACTCACTCTCATCACACAAAACATTTCCCCTTTACTTGTACACTGACTACTTGGAACAAAAAAATAATACATATTTATTGGTGACAAATGTCAGTCTGGGAGTTATTGAGAAGAAAACTGCAAGTGCTGGTTCTCGATTCATGAAGAGCTCTCTCAGAAATTTGCAGAATGCAGAGGGTCATATGGTTGTAAAAGATAATTTGGTAGTCAGTGGAGTTGGGAATACACAGCAAGTGTACAGATATCATGGTGGAAAATTCTGTTACTTTAGGAATATAAGCAGCTCAAACTACACCATACTTTATGATAAGGTTGAGAATACATGCAACAACAAACCAAAGTCTAACTGGGATTTTGGCTTGAGAAGACTGTGGCCTTTTGGTGCTGGATTTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

597

Amino Acids

67.65

Weight (kDa)

8.85

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PNGaseA PF12222 59 - 379 1.5e-104 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNGase_A_C PF25156 398 - 475 4.2e-22 PNGase_A C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1203
AccB7I CCANNNNNTGG 1 cut(s) 586
AciI CCGC 4 cut(s) 337, 387, 608, 1376
AcsI RAATTY 9 cut(s) 280, 592, 634, 673, 698, 1078, 1280, 1552, 1649
AcuI CTGAAG 1 cut(s) 576
AfaI GTAC 5 cut(s) 443, 797, 1067, 1433, 1631
AfiI CCNNNNNNNGG 4 cut(s) 513, 586, 830, 998
AjnI CCWGG 2 cut(s) 437, 770
AleI CACNNNNGTG 1 cut(s) 1205
AluBI AGCT 9 cut(s) 94, 193, 311, 370, 381, 1126, 1143, 1542, 1677
AluI AGCT 9 cut(s) 94, 193, 311, 370, 381, 1126, 1143, 1542, 1677
Alw21I GWGCWC 2 cut(s) 96, 1544
Alw26I GTCTC 1 cut(s) 1225
AlwNI CAGNNNCTG 1 cut(s) 381
AoxI GGCC 4 cut(s) 398, 887, 1145, 1766
ApeKI GCWGC 3 cut(s) 381, 803, 1674
ApoI RAATTY 9 cut(s) 280, 592, 634, 673, 698, 1078, 1280, 1552, 1649
ArsI GACNNNNNNTTYG 2 cut(s) 326, 358
AspS9I GGNCC 2 cut(s) 833, 1146
AsuC2I CCSGG 1 cut(s) 825
AsuHPI GGTGA 5 cut(s) 427, 1219, 1249, 1331, 1486
AvaII GGWCC 1 cut(s) 833
BaeGI GKGCMC 1 cut(s) 825
BanII GRGCYC 2 cut(s) 96, 1544
BbsI GAAGAC 1 cut(s) 1765
Bbv12I GWGCWC 2 cut(s) 96, 1544
BbvI GCAGC 3 cut(s) 368, 790, 1686
BccI CCATC 5 cut(s) 280, 644, 857, 1007, 1394
BciT130I CCWGG 2 cut(s) 439, 772
BclI TGATCA 1 cut(s) 571
BcnI CCSGG 1 cut(s) 825
BcoDI GTCTC 1 cut(s) 1225
BfaI CTAG 1 cut(s) 630
BfmI CTRYAG 1 cut(s) 1288
BfuAI ACCTGC 1 cut(s) 1203
BisI GCNGC 4 cut(s) 382, 804, 1376, 1675
BlsI GCNGC 4 cut(s) 383, 805, 1377, 1676
Bme1390I CCNGG 3 cut(s) 439, 772, 825
Bme18I GGWCC 1 cut(s) 833
BmgT120I GGNCC 2 cut(s) 833, 1146
BmiI GGNNCC 1 cut(s) 1148
BmrFI CCNGG 3 cut(s) 439, 772, 825
BmrI ACTGGG 5 cut(s) 230, 522, 1239, 1261, 1750
BmsI GCATC 3 cut(s) 25, 608, 1063
BmuI ACTGGG 5 cut(s) 230, 522, 1239, 1261, 1750
BoxI GACNNNNGTC 1 cut(s) 1481
BpiI GAAGAC 1 cut(s) 1765
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BpmI CTGGAG 2 cut(s) 185, 440
Bpu10I CCTNAGC 1 cut(s) 815
BpuEI CTTGAG 1 cut(s) 1774
BpuMI CCSGG 1 cut(s) 825
BsaJI CCNNGG 1 cut(s) 395
Bsc4I CCNNNNNNNGG 4 cut(s) 513, 586, 830, 998
Bse1I ACTGG 6 cut(s) 236, 517, 1167, 1234, 1267, 1745
Bse3DI GCAATG 2 cut(s) 54, 798
BseBI CCWGG 2 cut(s) 439, 772
BseDI CCNNGG 1 cut(s) 395
BseGI GGATG 3 cut(s) 655, 1018, 1344
BseLI CCNNNNNNNGG 4 cut(s) 513, 586, 830, 998
BseMI GCAATG 2 cut(s) 54, 798
BseMII CTCAG 5 cut(s) 97, 290, 388, 1107, 1561
BseNI ACTGG 6 cut(s) 236, 517, 1167, 1234, 1267, 1745
BseRI GAGGAG 1 cut(s) 11
BseSI GKGCMC 1 cut(s) 825
BseXI GCAGC 3 cut(s) 368, 790, 1686
BseYI CCCAGC 1 cut(s) 189
BsgI GTGCAG 2 cut(s) 367, 1346
BshFI GGCC 4 cut(s) 400, 889, 1147, 1768
BsiHKAI GWGCWC 2 cut(s) 96, 1544
BsiSI CCGG 1 cut(s) 825
BslFI GGGAC 1 cut(s) 1134
BslI CCNNNNNNNGG 4 cut(s) 513, 586, 830, 998
BsmAI GTCTC 1 cut(s) 1225
BsmFI GGGAC 1 cut(s) 1134
BsmI GAATGC 1 cut(s) 1567
BsnI GGCC 4 cut(s) 400, 889, 1147, 1768
Bsp1286I GDGCHC 3 cut(s) 96, 825, 1544
Bsp1407I TGTACA 2 cut(s) 1431, 1629
Bsp143I GATC 3 cut(s) 86, 571, 961
BspACI CCGC 4 cut(s) 337, 387, 608, 1376
BspANI GGCC 4 cut(s) 400, 889, 1147, 1768
BspCNI CTCAG 5 cut(s) 96, 289, 387, 1108, 1560
BspHI TCATGA 3 cut(s) 574, 754, 1533
BspLI GGNNCC 1 cut(s) 1148
BspMI ACCTGC 1 cut(s) 1203
BspQI GCTCTTC 2 cut(s) 1013, 1532
BsrDI GCAATG 2 cut(s) 54, 798
BsrGI TGTACA 2 cut(s) 1431, 1629
BsrI ACTGG 6 cut(s) 236, 517, 1167, 1234, 1267, 1745
BssECI CCNNGG 1 cut(s) 395
BssMI GATC 3 cut(s) 86, 571, 961
BssT1I CCWWGG 1 cut(s) 395
Bst2UI CCWGG 2 cut(s) 439, 772
Bst4CI ACNGT 5 cut(s) 898, 993, 1292, 1363, 1764
Bst6I CTCTTC 5 cut(s) 29, 53, 552, 1013, 1532
BstAUI TGTACA 2 cut(s) 1431, 1629
BstC8I GCNNGC 2 cut(s) 821, 1145
BstDEI CTNAG 6 cut(s) 83, 276, 374, 815, 1116, 1547
BstF5I GGATG 3 cut(s) 655, 1018, 1344
BstKTI GATC 3 cut(s) 89, 574, 964
BstMAI GTCTC 1 cut(s) 1225
BstMBI GATC 3 cut(s) 86, 571, 961
BstMWI GCNNNNNNNGC 3 cut(s) 605, 725, 1132
BstNI CCWGG 2 cut(s) 439, 772
BstNSI RCATGY 1 cut(s) 1719
BstPAI GACNNNNGTC 1 cut(s) 1481
BstSCI CCNGG 3 cut(s) 437, 770, 823
BstSFI CTRYAG 1 cut(s) 1288
BstSLI GKGCMC 1 cut(s) 825
BstV1I GCAGC 3 cut(s) 368, 790, 1686
BstV2I GAAGAC 1 cut(s) 1765
BsuRI GGCC 4 cut(s) 400, 889, 1147, 1768
BtsCI GGATG 3 cut(s) 655, 1018, 1344
BtsIMutI CAGTG 5 cut(s) 903, 1160, 1359, 1434, 1609
BveI ACCTGC 1 cut(s) 1203
Cac8I GCNNGC 2 cut(s) 821, 1145
CaiI CAGNNNCTG 1 cut(s) 381
CciI TCATGA 3 cut(s) 574, 754, 1533
Cfr13I GGNCC 2 cut(s) 833, 1146
CsiI ACCWGGT 1 cut(s) 437
Csp6I GTAC 5 cut(s) 442, 796, 1066, 1432, 1630
CviQI GTAC 5 cut(s) 442, 796, 1066, 1432, 1630
DdeI CTNAG 6 cut(s) 83, 276, 374, 815, 1116, 1547
DpnI GATC 3 cut(s) 88, 573, 963
DpnII GATC 3 cut(s) 86, 571, 961
DraI TTTAAA 1 cut(s) 1185
Eam1104I CTCTTC 5 cut(s) 29, 53, 552, 1013, 1532
EarI CTCTTC 5 cut(s) 29, 53, 552, 1013, 1532
EciI GGCGGA 1 cut(s) 623
Ecl136II GAGCTC 2 cut(s) 94, 1542
Eco130I CCWWGG 1 cut(s) 395
Eco147I AGGCCT 1 cut(s) 400
Eco24I GRGCYC 2 cut(s) 96, 1544
Eco32I GATATC 1 cut(s) 1637
Eco47I GGWCC 1 cut(s) 833
Eco53kI GAGCTC 2 cut(s) 94, 1542
Eco57I CTGAAG 1 cut(s) 576
EcoICRI GAGCTC 2 cut(s) 94, 1542
EcoRI GAATTC 1 cut(s) 673
EcoRII CCWGG 2 cut(s) 437, 770
EcoRV GATATC 1 cut(s) 1637
EcoT14I CCWWGG 1 cut(s) 395
EcoT38I GRGCYC 2 cut(s) 96, 1544
ErhI CCWWGG 1 cut(s) 395
FaqI GGGAC 1 cut(s) 1134
FauNDI CATATG 1 cut(s) 1575
FbaI TGATCA 1 cut(s) 571
Fnu4HI GCNGC 4 cut(s) 382, 804, 1376, 1675
FokI GGATG 3 cut(s) 662, 1025, 1331
FriOI GRGCYC 2 cut(s) 96, 1544
Fsp4HI GCNGC 4 cut(s) 382, 804, 1376, 1675
FspBI CTAG 1 cut(s) 630
GluI GCNGC 4 cut(s) 382, 804, 1376, 1675
GsaI CCCAGC 1 cut(s) 193
GsuI CTGGAG 2 cut(s) 185, 440
HaeIII GGCC 4 cut(s) 400, 889, 1147, 1768
HapII CCGG 1 cut(s) 825
HinfI GANTC 5 cut(s) 463, 616, 706, 767, 1530
HpaII CCGG 1 cut(s) 825
HphI GGTGA 5 cut(s) 427, 1219, 1249, 1331, 1486
Hpy166II GTNNAC 6 cut(s) 67, 520, 1336, 1393, 1434, 1630
Hpy188I TCNGA 6 cut(s) 86, 91, 279, 468, 1171, 1550
Hpy188III TCNNGA 8 cut(s) 299, 376, 457, 575, 630, 755, 1527, 1534
Hpy8I GTNNAC 6 cut(s) 67, 520, 1336, 1393, 1434, 1630
HpyAV CCTTC 7 cut(s) 47, 318, 421, 640, 688, 978, 1389
HpyCH4III ACNGT 5 cut(s) 898, 993, 1292, 1363, 1764
HpyF10VI GCNNNNNNNGC 3 cut(s) 605, 725, 1132
HpyF3I CTNAG 6 cut(s) 83, 276, 374, 815, 1116, 1547
Ksp22I TGATCA 1 cut(s) 571
Kzo9I GATC 3 cut(s) 86, 571, 961
LguI GCTCTTC 2 cut(s) 1013, 1532
LmnI GCTCC 1 cut(s) 378
Lsp1109I GCAGC 3 cut(s) 368, 790, 1686
LweI GCATC 3 cut(s) 25, 608, 1063
MabI ACCWGGT 1 cut(s) 437
MaeI CTAG 1 cut(s) 630
MaeIII GTNAC 4 cut(s) 148, 1042, 1474, 1655
MalI GATC 3 cut(s) 88, 573, 963
MboI GATC 3 cut(s) 86, 571, 961
MfeI CAATTG 1 cut(s) 948
MhlI GDGCHC 3 cut(s) 96, 825, 1544
MmeI TCCRAC 2 cut(s) 714, 1074
MseI TTAA 2 cut(s) 1038, 1184
MslI CAYNNNNRTG 4 cut(s) 528, 759, 1205, 1353
MspI CCGG 1 cut(s) 825
MspR9I CCNGG 3 cut(s) 439, 772, 825
MunI CAATTG 1 cut(s) 948
Mva1269I GAATGC 1 cut(s) 1567
MvaI CCWGG 2 cut(s) 439, 772
MwoI GCNNNNNNNGC 3 cut(s) 605, 725, 1132
NciI CCSGG 1 cut(s) 825
NdeI CATATG 1 cut(s) 1575
NdeII GATC 3 cut(s) 86, 571, 961
NlaIV GGNNCC 1 cut(s) 1148
NmuCI GTSAC 1 cut(s) 1474
NspI RCATGY 1 cut(s) 1719
OliI CACNNNNGTG 1 cut(s) 1205
PagI TCATGA 3 cut(s) 574, 754, 1533
PceI AGGCCT 1 cut(s) 400
PciSI GCTCTTC 2 cut(s) 1013, 1532
PctI GAATGC 1 cut(s) 1567
PfeI GAWTC 5 cut(s) 463, 616, 706, 767, 1530
PflMI CCANNNNNTGG 1 cut(s) 586
PkrI GCNGC 4 cut(s) 383, 805, 1377, 1676
PshAI GACNNNNGTC 1 cut(s) 1481
Psp124BI GAGCTC 2 cut(s) 96, 1544
Psp6I CCWGG 2 cut(s) 437, 770
PspFI CCCAGC 1 cut(s) 189
PspGI CCWGG 2 cut(s) 437, 770
PspN4I GGNNCC 1 cut(s) 1148
PspPI GGNCC 2 cut(s) 833, 1146
PstNI CAGNNNCTG 1 cut(s) 381
RsaI GTAC 5 cut(s) 443, 797, 1067, 1433, 1631
RsaNI GTAC 5 cut(s) 442, 796, 1066, 1432, 1630
RseI CAYNNNNRTG 4 cut(s) 528, 759, 1205, 1353
SacI GAGCTC 2 cut(s) 96, 1544
SapI GCTCTTC 2 cut(s) 1013, 1532
SaqAI TTAA 2 cut(s) 1038, 1184
SatI GCNGC 4 cut(s) 382, 804, 1376, 1675
Sau3AI GATC 3 cut(s) 86, 571, 961
Sau96I GGNCC 2 cut(s) 833, 1146
ScrFI CCNGG 3 cut(s) 439, 772, 825
SduI GDGCHC 3 cut(s) 96, 825, 1544
SexAI ACCWGGT 1 cut(s) 437
SfaNI GCATC 3 cut(s) 25, 608, 1063
SfcI CTRYAG 1 cut(s) 1288
SinI GGWCC 1 cut(s) 833
SmiMI CAYNNNNRTG 4 cut(s) 528, 759, 1205, 1353
SmlI CTYRAG 1 cut(s) 1753
SmoI CTYRAG 1 cut(s) 1753
SseBI AGGCCT 1 cut(s) 400
SsiI CCGC 4 cut(s) 337, 387, 608, 1376
SspI AATATT 1 cut(s) 1258
SspMI CTAG 1 cut(s) 630
SstI GAGCTC 2 cut(s) 96, 1544
StuI AGGCCT 1 cut(s) 400
StyD4I CCNGG 3 cut(s) 437, 770, 823
StyI CCWWGG 1 cut(s) 395
TaaI ACNGT 5 cut(s) 898, 993, 1292, 1363, 1764
TaqI TCGA 4 cut(s) 712, 981, 1247, 1528
TatI WGTACW 3 cut(s) 795, 1431, 1629
TauI GCSGC 1 cut(s) 1378
TfiI GAWTC 5 cut(s) 463, 616, 706, 767, 1530
Tru1I TTAA 2 cut(s) 1038, 1184
Tru9I TTAA 2 cut(s) 1038, 1184
TscAI CASTG 5 cut(s) 903, 1167, 1366, 1441, 1609
TseFI GTSAC 1 cut(s) 1474
TseI GCWGC 3 cut(s) 381, 803, 1674
Tsp45I GTSAC 1 cut(s) 1474
TspDTI ATGAA 7 cut(s) 438, 530, 743, 780, 1355, 1522, 1550
TspRI CASTG 5 cut(s) 903, 1167, 1366, 1441, 1609
Van91I CCANNNNNTGG 1 cut(s) 586
VpaK11BI GGWCC 1 cut(s) 833
XapI RAATTY 9 cut(s) 280, 592, 634, 673, 698, 1078, 1280, 1552, 1649
XbaI TCTAGA 1 cut(s) 629
XceI RCATGY 1 cut(s) 1719
XcmI CCANNNNNNNNNTGG 1 cut(s) 1737
XspI CTAG 1 cut(s) 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.