Rorug05G0121700

peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
10754341 .. 10755340
1000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0121700.1

Sequence Viewer

Length: 429 bp
ATGAAGAGAGAGATGGCGGGTTCAGTAAAACTCAGCGCAACGATCCCGGCTTTGGTGATGGTGATGGTGATGGCGATAGGATCGGAAGCCCGGGAGCTGCGGCCGTCTGATCACGGCCTCGTGTACACGCCGGCGGGGAACACGTCGGCGGCGCCGGAGGAGGCGAAGACGTTCTTCAGCGGAGGAGGAGGTGGGGGAGGGGGAGGAGAGTCGGGAGGGGTGGCATTGCCGAAGGCGATGAACTCGAACGACACGTCGTGGTGGGAGGGAGTGAACGCACGTGGGCGGGGGAGGGATCACGTGAGGGACGTGCTGGTGGTGGTGAGCTTGGTTTGTGGGATTACAGGTGTCGTTCTATTTGTGGCCTCCGCTTTTGTTTATCTCTTGAGGTACCGAAAGCGCAAAGCTTCATCTCCTCCTCCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

142

Amino Acids

14.77

Weight (kDa)

9.56

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 390
AccB1I GGYRCC 2 cut(s) 151, 390
AciI CCGC 7 cut(s) 17, 100, 134, 149, 180, 286, 369
AclWI GGATC 3 cut(s) 37, 88, 303
AcoI YGGCCR 1 cut(s) 101
AcuI CTGAAG 1 cut(s) 160
AcvI CACGTG 2 cut(s) 281, 301
AcyI GRCGYC 1 cut(s) 152
AdeI CACNNNGTG 1 cut(s) 258
AfaI GTAC 2 cut(s) 125, 392
AfiI CCNNNNNNNGG 1 cut(s) 52
AflIII ACRYGT 2 cut(s) 141, 252
AjiI CACGTC 3 cut(s) 144, 255, 310
AluBI AGCT 3 cut(s) 97, 327, 407
AluI AGCT 3 cut(s) 97, 327, 407
AlwI GGATC 3 cut(s) 37, 88, 303
Ama87I CYCGRG 1 cut(s) 90
AoxI GGCC 3 cut(s) 101, 115, 363
ApeKI GCWGC 1 cut(s) 97
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
Asp700I GAANNNNTTC 1 cut(s) 170
Asp718I GGTACC 1 cut(s) 390
AspLEI GCGC 3 cut(s) 38, 154, 402
AsuC2I CCSGG 3 cut(s) 47, 91, 92
AsuHPI GGTGA 4 cut(s) 67, 73, 79, 334
AvaI CYCGRG 1 cut(s) 90
BanI GGYRCC 2 cut(s) 151, 390
BauI CACGAG 1 cut(s) 119
BbrPI CACGTG 2 cut(s) 281, 301
BbsI GAAGAC 1 cut(s) 173
BbvI GCAGC 1 cut(s) 84
BccI CCATC 4 cut(s) 7, 52, 58, 64
BceAI ACGGC 2 cut(s) 88, 130
BclI TGATCA 1 cut(s) 109
BcnI CCSGG 3 cut(s) 47, 91, 92
BfoI RGCGCY 1 cut(s) 155
BisI GCNGC 3 cut(s) 98, 101, 150
BlsI GCNGC 3 cut(s) 99, 102, 151
Bme1390I CCNGG 3 cut(s) 47, 91, 92
BmeT110I CYCGRG 1 cut(s) 90
BmgBI CACGTC 3 cut(s) 144, 255, 310
BmiI GGNNCC 2 cut(s) 153, 392
BmrFI CCNGG 3 cut(s) 47, 91, 92
BpiI GAAGAC 1 cut(s) 173
BpuEI CTTGAG 1 cut(s) 406
BpuMI CCSGG 3 cut(s) 47, 91, 92
BsaAI YACGTR 2 cut(s) 281, 301
BsaHI GRCGYC 1 cut(s) 152
BsaJI CCNNGG 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 52
Bse118I RCCGGY 1 cut(s) 130
Bse3DI GCAATG 1 cut(s) 224
BseDI CCNNGG 1 cut(s) 90
BseLI CCNNNNNNNGG 1 cut(s) 52
BseMI GCAATG 1 cut(s) 224
BseMII CTCAG 1 cut(s) 46
BseRI GAGGAG 6 cut(s) 173, 198, 201, 219, 405, 408
BseX3I CGGCCG 1 cut(s) 101
BseXI GCAGC 1 cut(s) 84
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 3 cut(s) 103, 117, 365
BshNI GGYRCC 2 cut(s) 151, 390
BsiEI CGRYCG 1 cut(s) 104
BsiHKCI CYCGRG 1 cut(s) 90
BsiSI CCGG 4 cut(s) 47, 91, 131, 155
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 1 cut(s) 52
BsmFI GGGAC 1 cut(s) 320
BsnI GGCC 3 cut(s) 103, 117, 365
BsoBI CYCGRG 1 cut(s) 90
Bsp1407I TGTACA 1 cut(s) 123
Bsp143I GATC 4 cut(s) 42, 80, 109, 295
BspACI CCGC 7 cut(s) 17, 100, 134, 149, 180, 286, 369
BspANI GGCC 3 cut(s) 103, 117, 365
BspCNI CTCAG 1 cut(s) 45
BspLI GGNNCC 2 cut(s) 153, 392
BspPI GGATC 3 cut(s) 37, 88, 303
BspT107I GGYRCC 2 cut(s) 151, 390
BsrDI GCAATG 1 cut(s) 224
BsrFI RCCGGY 1 cut(s) 130
BsrGI TGTACA 1 cut(s) 123
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 1 cut(s) 90
BssMI GATC 4 cut(s) 42, 80, 109, 295
BssNI GRCGYC 1 cut(s) 152
BssSI CACGAG 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 119
BstACI GRCGYC 1 cut(s) 152
BstAUI TGTACA 1 cut(s) 123
BstBAI YACGTR 2 cut(s) 281, 301
BstC8I GCNNGC 1 cut(s) 132
BstDEI CTNAG 1 cut(s) 32
BstH2I RGCGCY 1 cut(s) 155
BstHHI GCGC 3 cut(s) 38, 154, 402
BstKTI GATC 4 cut(s) 45, 83, 112, 298
BstMBI GATC 4 cut(s) 42, 80, 109, 295
BstMCI CGRYCG 1 cut(s) 104
BstSCI CCNGG 3 cut(s) 45, 89, 90
BstV1I GCAGC 1 cut(s) 84
BstV2I GAAGAC 1 cut(s) 173
BstZI CGGCCG 1 cut(s) 101
BsuRI GGCC 3 cut(s) 103, 117, 365
BtgZI GCGATG 1 cut(s) 251
BtrI CACGTC 3 cut(s) 144, 255, 310
Cac8I GCNNGC 1 cut(s) 132
CfoI GCGC 3 cut(s) 38, 154, 402
Cfr10I RCCGGY 1 cut(s) 130
Cfr9I CCCGGG 1 cut(s) 90
Csp6I GTAC 2 cut(s) 124, 391
CviJI RGCY 8 cut(s) 50, 89, 97, 103, 117, 327, 365, 407
CviKI_1 RGCY 8 cut(s) 50, 89, 97, 103, 117, 327, 365, 407
CviQI GTAC 2 cut(s) 124, 391
DdeI CTNAG 1 cut(s) 32
DinI GGCGCC 1 cut(s) 153
DpnI GATC 4 cut(s) 44, 82, 111, 297
DpnII GATC 4 cut(s) 42, 80, 109, 295
DraIII CACNNNGTG 1 cut(s) 258
EaeI YGGCCR 1 cut(s) 101
EagI CGGCCG 1 cut(s) 101
EclXI CGGCCG 1 cut(s) 101
Eco52I CGGCCG 1 cut(s) 101
Eco57I CTGAAG 1 cut(s) 160
Eco72I CACGTG 2 cut(s) 281, 301
Eco88I CYCGRG 1 cut(s) 90
EgeI GGCGCC 1 cut(s) 153
EheI GGCGCC 1 cut(s) 153
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 1 cut(s) 320
FauI CCCGC 3 cut(s) 10, 127, 279
FbaI TGATCA 1 cut(s) 109
Fnu4HI GCNGC 3 cut(s) 98, 101, 150
Fsp4HI GCNGC 3 cut(s) 98, 101, 150
GlaI GCGC 3 cut(s) 37, 153, 401
GluI GCNGC 3 cut(s) 98, 101, 150
HaeII RGCGCY 1 cut(s) 155
HaeIII GGCC 3 cut(s) 103, 117, 365
HapII CCGG 4 cut(s) 47, 91, 131, 155
HhaI GCGC 3 cut(s) 38, 154, 402
Hin1I GRCGYC 1 cut(s) 152
Hin6I GCGC 3 cut(s) 36, 152, 400
HinP1I GCGC 3 cut(s) 36, 152, 400
HindIII AAGCTT 1 cut(s) 405
HinfI GANTC 1 cut(s) 209
HpaII CCGG 4 cut(s) 47, 91, 131, 155
HphI GGTGA 4 cut(s) 67, 73, 79, 334
Hpy166II GTNNAC 3 cut(s) 124, 126, 274
Hpy188I TCNGA 2 cut(s) 85, 109
Hpy188III TCNNGA 2 cut(s) 213, 385
Hpy8I GTNNAC 3 cut(s) 124, 126, 274
Hpy99I CGWCG 2 cut(s) 148, 259
HpyAV CCTTC 1 cut(s) 226
HpyCH4IV ACGT 6 cut(s) 143, 170, 254, 280, 300, 309
HpyF3I CTNAG 1 cut(s) 32
HpySE526I ACGT 6 cut(s) 143, 170, 254, 280, 300, 309
Hsp92I GRCGYC 1 cut(s) 152
HspAI GCGC 3 cut(s) 36, 152, 400
KasI GGCGCC 1 cut(s) 151
KpnI GGTACC 1 cut(s) 394
KroI GCCGGC 1 cut(s) 130
KroNI GCCGGC 1 cut(s) 132
Ksp22I TGATCA 1 cut(s) 109
Kzo9I GATC 4 cut(s) 42, 80, 109, 295
LmnI GCTCC 1 cut(s) 94
LpnPI CCDG 6 cut(s) 60, 104, 144, 168, 299, 330
Lsp1109I GCAGC 1 cut(s) 84
MaeII ACGT 6 cut(s) 143, 170, 254, 280, 300, 309
MalI GATC 4 cut(s) 44, 82, 111, 297
MboI GATC 4 cut(s) 42, 80, 109, 295
MboII GAAGA 3 cut(s) 16, 166, 178
Mly113I GGCGCC 1 cut(s) 152
MlyI GAGTC 1 cut(s) 218
MreI CGCCGGCG 1 cut(s) 130
MroNI GCCGGC 1 cut(s) 130
MroXI GAANNNNTTC 1 cut(s) 170
MspA1I CMGCKG 1 cut(s) 180
MspI CCGG 4 cut(s) 47, 91, 131, 155
MspR9I CCNGG 3 cut(s) 47, 91, 92
NaeI GCCGGC 1 cut(s) 132
NarI GGCGCC 1 cut(s) 152
NciI CCSGG 3 cut(s) 47, 91, 92
NdeII GATC 4 cut(s) 42, 80, 109, 295
NgoMIV GCCGGC 1 cut(s) 130
NlaIV GGNNCC 2 cut(s) 153, 392
PcsI WCGNNNNNNNCGW 2 cut(s) 251, 306
PdiI GCCGGC 1 cut(s) 132
PdmI GAANNNNTTC 1 cut(s) 170
PkrI GCNGC 3 cut(s) 99, 102, 151
PleI GAGTC 1 cut(s) 217
PluTI GGCGCC 1 cut(s) 155
PmaCI CACGTG 2 cut(s) 281, 301
PmlI CACGTG 2 cut(s) 281, 301
PpsI GAGTC 1 cut(s) 217
Ppu21I YACGTR 2 cut(s) 281, 301
PspCI CACGTG 2 cut(s) 281, 301
PspN4I GGNNCC 2 cut(s) 153, 392
RsaI GTAC 2 cut(s) 125, 392
RsaNI GTAC 2 cut(s) 124, 391
SatI GCNGC 3 cut(s) 98, 101, 150
Sau3AI GATC 4 cut(s) 42, 80, 109, 295
SchI GAGTC 1 cut(s) 218
ScrFI CCNGG 3 cut(s) 47, 91, 92
SfoI GGCGCC 1 cut(s) 153
SgrAI CRCCGGYG 1 cut(s) 130
SmaI CCCGGG 1 cut(s) 92
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
SsiI CCGC 7 cut(s) 17, 100, 134, 149, 180, 286, 369
SspDI GGCGCC 1 cut(s) 151
StyD4I CCNGG 3 cut(s) 45, 89, 90
TaiI ACGT 6 cut(s) 146, 173, 257, 283, 303, 312
TaqI TCGA 1 cut(s) 245
TatI WGTACW 1 cut(s) 123
TauI GCSGC 2 cut(s) 103, 152
TseI GCWGC 1 cut(s) 97
TspDTI ATGAA 3 cut(s) 17, 254, 399
TspMI CCCGGG 1 cut(s) 90
XmaI CCCGGG 1 cut(s) 90
XmnI GAANNNNTTC 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.