mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23590 |
| fragaria_vesca | FvH4_4g14380 FvH4_4g14390 |
| malus_domestica | MD13G1182100.v1.1 MD13G1182200.v1.1 MD16G1182600.v1.1 |
| prunus_persica | Prupe.1G150000_v2.0.a1 Prupe.1G150000_v2.0.a1 Prupe.1G150100_v2.0.a1 |
| pyrus_communis | pycom13g15720 pycom16g15330 |
| rosa_chinensis | RchiOBHm_Chr4g0418521 RchiOBHm_Chr4g0418541 |
| rosa_laevigata | RLG00000007855 RLG00000007856 |
| rosa_multiflora | Rmu_sc0000363.1_g000040 Rmu_sc0001879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00361790 Rroxscaffold_5G00361800 |
| rosa_rugosa | Rorug04G0154000 Rorug04G0154100.1 |
| rosa_samantha | Rh4AG215600 Rh4AG215700 Rh4BG215000 Rh4BG215100 Rh4CG227200 Rh4CG227300 Rh4DG213900 Rh4DG214000 |
| rosa_wichuraiana | Rw4G018240 Rw4G018250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1445 |
| Acc36I | ACCTGC | 1 cut(s) | 1288 |
| AccBSI | CCGCTC | 2 cut(s) | 2896, 3775 |
| AccI | GTMKAC | 2 cut(s) | 140, 293 |
| AccII | CGCG | 1 cut(s) | 3677 |
| AclI | AACGTT | 2 cut(s) | 189, 2998 |
| AcoI | YGGCCR | 4 cut(s) | 1546, 2717, 3151, 3364 |
| AcuI | CTGAAG | 3 cut(s) | 867, 3070, 3356 |
| AcyI | GRCGYC | 1 cut(s) | 2784 |
| AfaI | GTAC | 3 cut(s) | 170, 1587, 2566 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1160, 2141, 2895, 2923, 3306, 3690 |
| AgeI | ACCGGT | 2 cut(s) | 1049, 3440 |
| AhlI | ACTAGT | 1 cut(s) | 1028 |
| AjnI | CCWGG | 8 cut(s) | 10, 451, 1315, 1531, 1841, 2806, 2907, 3199 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2352, 2384 |
| Alw21I | GWGCWC | 6 cut(s) | 554, 1088, 1680, 3145, 3232, 3595 |
| Alw26I | GTCTC | 6 cut(s) | 576, 962, 2211, 2227, 3250, 3884 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1573, 1658, 2471, 3081 |
| Ama87I | CYCGRG | 3 cut(s) | 547, 1679, 2002 |
| AoxI | GGCC | 7 cut(s) | 1529, 1546, 2717, 2914, 2951, 3151, 3364 |
| AseI | ATTAAT | 1 cut(s) | 1077 |
| AsiGI | ACCGGT | 2 cut(s) | 1049, 3440 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 119, 2166, 2388, 2578, 3261 |
| AspLEI | GCGC | 1 cut(s) | 1470 |
| AspS9I | GGNCC | 8 cut(s) | 371, 1163, 1300, 2915, 2982, 3457, 3527, 3580 |
| AsuC2I | CCSGG | 2 cut(s) | 289, 2630 |
| AsuHPI | GGTGA | 7 cut(s) | 340, 1319, 1648, 2683, 3760, 3772, 3793 |
| AsuII | TTCGAA | 2 cut(s) | 737, 842 |
| AsuNHI | GCTAGC | 1 cut(s) | 3850 |
| AvaI | CYCGRG | 3 cut(s) | 547, 1679, 2002 |
| AvaII | GGWCC | 7 cut(s) | 371, 1163, 1300, 2982, 3457, 3527, 3580 |
| BaeGI | GKGCMC | 1 cut(s) | 2453 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3786, 3819 |
| BalI | TGGCCA | 2 cut(s) | 2719, 3153 |
| BamHI | GGATCC | 1 cut(s) | 1150 |
| BanII | GRGCYC | 4 cut(s) | 554, 1618, 1680, 3145 |
| BbsI | GAAGAC | 2 cut(s) | 3031, 3344 |
| Bbv12I | GWGCWC | 6 cut(s) | 554, 1088, 1680, 3145, 3232, 3595 |
| BbvCI | CCTCAGC | 1 cut(s) | 2667 |
| BccI | CCATC | 8 cut(s) | 49, 478, 659, 1001, 3122, 3493, 3538, 3683 |
| BceAI | ACGGC | 4 cut(s) | 110, 2513, 2722, 3379 |
| BciT130I | CCWGG | 8 cut(s) | 12, 453, 1317, 1533, 1843, 2808, 2909, 3201 |
| BciVI | GTATCC | 1 cut(s) | 412 |
| BcnI | CCSGG | 2 cut(s) | 289, 2630 |
| BcoDI | GTCTC | 6 cut(s) | 576, 962, 2211, 2227, 3250, 3884 |
| BcuI | ACTAGT | 1 cut(s) | 1028 |
| BfmI | CTRYAG | 4 cut(s) | 1737, 2598, 2937, 3192 |
| BfuAI | ACCTGC | 1 cut(s) | 1288 |
| BfuI | GTATCC | 1 cut(s) | 412 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1361, 1373 |
| BlpI | GCTNAGC | 2 cut(s) | 536, 1669 |
| Bme18I | GGWCC | 7 cut(s) | 371, 1163, 1300, 2982, 3457, 3527, 3580 |
| BmeT110I | CYCGRG | 3 cut(s) | 547, 1679, 2002 |
| BmgT120I | GGNCC | 8 cut(s) | 371, 1163, 1300, 2915, 2982, 3457, 3527, 3580 |
| BmiI | GGNNCC | 8 cut(s) | 9, 1152, 1164, 1329, 1617, 1947, 2146, 2984 |
| BmrI | ACTGGG | 1 cut(s) | 550 |
| BmsI | GCATC | 9 cut(s) | 493, 580, 988, 1763, 2267, 2315, 2536, 2642, 3635 |
| BmtI | GCTAGC | 1 cut(s) | 3854 |
| BmuI | ACTGGG | 1 cut(s) | 550 |
| BpiI | GAAGAC | 2 cut(s) | 3031, 3344 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 942, 974, 3251, 3283 |
| BpmI | CTGGAG | 3 cut(s) | 2049, 2790, 2945 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2667, 3448 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 536, 1669 |
| Bpu14I | TTCGAA | 2 cut(s) | 737, 842 |
| BpuEI | CTTGAG | 4 cut(s) | 45, 317, 558, 3378 |
| BpuMI | CCSGG | 2 cut(s) | 289, 2630 |
| Bsa29I | ATCGAT | 1 cut(s) | 3792 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1011, 1040, 1813 |
| BsaHI | GRCGYC | 1 cut(s) | 2784 |
| BsaI | GGTCTC | 2 cut(s) | 2211, 3884 |
| BsaJI | CCNNGG | 9 cut(s) | 126, 946, 1303, 1315, 1842, 2948, 3154, 3200, 3870 |
| BsaWI | WCCGGW | 3 cut(s) | 1049, 3440, 3740 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 122, 152, 536, 566 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1160, 2141, 2895, 2923, 3306, 3690 |
| Bse118I | RCCGGY | 2 cut(s) | 1049, 3440 |
| Bse1I | ACTGG | 6 cut(s) | 556, 622, 1182, 1512, 2438, 2693 |
| Bse3DI | GCAATG | 5 cut(s) | 1008, 1405, 1638, 3393, 3826 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1011, 1040, 1813 |
| BseBI | CCWGG | 8 cut(s) | 12, 453, 1317, 1533, 1843, 2808, 2909, 3201 |
| BseCI | ATCGAT | 1 cut(s) | 3792 |
| BseDI | CCNNGG | 9 cut(s) | 126, 946, 1303, 1315, 1842, 2948, 3154, 3200, 3870 |
| BseGI | GGATG | 5 cut(s) | 1012, 1720, 2101, 3626, 3713 |
| BseJI | GATNNNNATC | 3 cut(s) | 1011, 1040, 1813 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1160, 2141, 2895, 2923, 3306, 3690 |
| BseMI | GCAATG | 5 cut(s) | 1008, 1405, 1638, 3393, 3826 |
| BseNI | ACTGG | 6 cut(s) | 556, 622, 1182, 1512, 2438, 2693 |
| BseRI | GAGGAG | 3 cut(s) | 234, 1320, 3062 |
| BseSI | GKGCMC | 1 cut(s) | 2453 |
| BseYI | CCCAGC | 1 cut(s) | 2917 |
| BsgI | GTGCAG | 1 cut(s) | 785 |
| Bsh1236I | CGCG | 1 cut(s) | 3677 |
| BshFI | GGCC | 7 cut(s) | 1531, 1548, 2719, 2916, 2953, 3153, 3366 |
| BshTI | ACCGGT | 2 cut(s) | 1049, 3440 |
| BshVI | ATCGAT | 1 cut(s) | 3792 |
| BsiHKAI | GWGCWC | 6 cut(s) | 554, 1088, 1680, 3145, 3232, 3595 |
| BsiHKCI | CYCGRG | 3 cut(s) | 547, 1679, 2002 |
| BsiSI | CCGG | 6 cut(s) | 289, 1050, 2630, 2822, 3441, 3741 |
| BslFI | GGGAC | 1 cut(s) | 1176 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1160, 2141, 2895, 2923, 3306, 3690 |
| BsmAI | GTCTC | 6 cut(s) | 576, 962, 2211, 2227, 3250, 3884 |
| BsmFI | GGGAC | 1 cut(s) | 1176 |
| BsmI | GAATGC | 3 cut(s) | 1917, 2066, 3112 |
| BsnI | GGCC | 7 cut(s) | 1531, 1548, 2719, 2916, 2953, 3153, 3366 |
| Bso31I | GGTCTC | 2 cut(s) | 2211, 3884 |
| BsoBI | CYCGRG | 3 cut(s) | 547, 1679, 2002 |
| Bsp119I | TTCGAA | 2 cut(s) | 737, 842 |
| Bsp1286I | GDGCHC | 8 cut(s) | 554, 1088, 1618, 1680, 2453, 3145, 3232, 3595 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 536, 1669 |
| Bsp19I | CCATGG | 2 cut(s) | 946, 3154 |
| Bsp68I | TCGCGA | 1 cut(s) | 3677 |
| BspANI | GGCC | 7 cut(s) | 1531, 1548, 2719, 2916, 2953, 3153, 3366 |
| BspDI | ATCGAT | 1 cut(s) | 3792 |
| BspFNI | CGCG | 1 cut(s) | 3677 |
| BspHI | TCATGA | 2 cut(s) | 390, 2700 |
| BspLI | GGNNCC | 8 cut(s) | 9, 1152, 1164, 1329, 1617, 1947, 2146, 2984 |
| BspMAI | CTGCAG | 1 cut(s) | 2941 |
| BspMI | ACCTGC | 1 cut(s) | 1288 |
| BspOI | GCTAGC | 1 cut(s) | 3854 |
| BspQI | GCTCTTC | 2 cut(s) | 267, 3150 |
| BspT104I | TTCGAA | 2 cut(s) | 737, 842 |
| BspTNI | GGTCTC | 2 cut(s) | 2211, 3884 |
| BsrBI | CCGCTC | 2 cut(s) | 2896, 3775 |
| BsrDI | GCAATG | 5 cut(s) | 1008, 1405, 1638, 3393, 3826 |
| BsrFI | RCCGGY | 2 cut(s) | 1049, 3440 |
| BsrI | ACTGG | 6 cut(s) | 556, 622, 1182, 1512, 2438, 2693 |
| BssAI | RCCGGY | 2 cut(s) | 1049, 3440 |
| BssECI | CCNNGG | 9 cut(s) | 126, 946, 1303, 1315, 1842, 2948, 3154, 3200, 3870 |
| BssNI | GRCGYC | 1 cut(s) | 2784 |
| BssT1I | CCWWGG | 4 cut(s) | 946, 2948, 3154, 3870 |
| Bst2UI | CCWGG | 8 cut(s) | 12, 453, 1317, 1533, 1843, 2808, 2909, 3201 |
| Bst6I | CTCTTC | 9 cut(s) | 267, 931, 967, 1233, 1977, 2025, 2079, 3150, 3252 |
| BstACI | GRCGYC | 1 cut(s) | 2784 |
| BstBI | TTCGAA | 2 cut(s) | 737, 842 |
| BstDSI | CCRYGG | 3 cut(s) | 126, 946, 3154 |
| BstF5I | GGATG | 5 cut(s) | 1012, 1720, 2101, 3626, 3713 |
| BstFNI | CGCG | 1 cut(s) | 3677 |
| BstHHI | GCGC | 1 cut(s) | 1470 |
| BstMAI | GTCTC | 6 cut(s) | 576, 962, 2211, 2227, 3250, 3884 |
| BstNI | CCWGG | 8 cut(s) | 12, 453, 1317, 1533, 1843, 2808, 2909, 3201 |
| BstNSI | RCATGY | 5 cut(s) | 1198, 1444, 1468, 1879, 2962 |
| BstSFI | CTRYAG | 4 cut(s) | 1737, 2598, 2937, 3192 |
| BstSLI | GKGCMC | 1 cut(s) | 2453 |
| BstUI | CGCG | 1 cut(s) | 3677 |
| BstV2I | GAAGAC | 2 cut(s) | 3031, 3344 |
| BstX2I | RGATCY | 9 cut(s) | 823, 917, 1150, 1904, 1991, 2205, 2360, 3183, 3535 |
| BstYI | RGATCY | 9 cut(s) | 823, 917, 1150, 1904, 1991, 2205, 2360, 3183, 3535 |
| Bsu15I | ATCGAT | 1 cut(s) | 3792 |
| BsuI | GTATCC | 1 cut(s) | 412 |
| BsuRI | GGCC | 7 cut(s) | 1531, 1548, 2719, 2916, 2953, 3153, 3366 |
| BsuTUI | ATCGAT | 1 cut(s) | 3792 |
| BtgI | CCRYGG | 3 cut(s) | 126, 946, 3154 |
| BtgZI | GCGATG | 1 cut(s) | 3658 |
| BtsCI | GGATG | 5 cut(s) | 1012, 1720, 2101, 3626, 3713 |
| BtsIMutI | CAGTG | 8 cut(s) | 563, 699, 1788, 2181, 2742, 3094, 3348, 3708 |
| BtuMI | TCGCGA | 1 cut(s) | 3677 |
| BveI | ACCTGC | 1 cut(s) | 1288 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1573, 1658, 2471, 3081 |
| CciI | TCATGA | 2 cut(s) | 390, 2700 |
| CfoI | GCGC | 1 cut(s) | 1470 |
| Cfr10I | RCCGGY | 2 cut(s) | 1049, 3440 |
| Cfr13I | GGNCC | 8 cut(s) | 371, 1163, 1300, 2915, 2982, 3457, 3527, 3580 |
| ClaI | ATCGAT | 1 cut(s) | 3792 |
| CseI | GACGC | 2 cut(s) | 2773, 3065 |
| CsiI | ACCWGGT | 1 cut(s) | 451 |
| Csp6I | GTAC | 3 cut(s) | 169, 1586, 2565 |
| CspAI | ACCGGT | 2 cut(s) | 1049, 3440 |
| CviQI | GTAC | 3 cut(s) | 169, 1586, 2565 |
| DraI | TTTAAA | 3 cut(s) | 795, 2082, 2433 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1445 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1445 |
| EaeI | YGGCCR | 4 cut(s) | 1546, 2717, 3151, 3364 |
| Eam1104I | CTCTTC | 9 cut(s) | 267, 931, 967, 1233, 1977, 2025, 2079, 3150, 3252 |
| EarI | CTCTTC | 9 cut(s) | 267, 931, 967, 1233, 1977, 2025, 2079, 3150, 3252 |
| Ecl136II | GAGCTC | 3 cut(s) | 552, 1678, 3143 |
| Eco130I | CCWWGG | 4 cut(s) | 946, 2948, 3154, 3870 |
| Eco24I | GRGCYC | 4 cut(s) | 554, 1618, 1680, 3145 |
| Eco31I | GGTCTC | 2 cut(s) | 2211, 3884 |
| Eco32I | GATATC | 4 cut(s) | 1013, 1728, 2518, 2791 |
| Eco47I | GGWCC | 7 cut(s) | 371, 1163, 1300, 2982, 3457, 3527, 3580 |
| Eco53kI | GAGCTC | 3 cut(s) | 552, 1678, 3143 |
| Eco57I | CTGAAG | 3 cut(s) | 867, 3070, 3356 |
| Eco88I | CYCGRG | 3 cut(s) | 547, 1679, 2002 |
| EcoICRI | GAGCTC | 3 cut(s) | 552, 1678, 3143 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1163, 1300 |
| EcoRI | GAATTC | 1 cut(s) | 677 |
| EcoRII | CCWGG | 8 cut(s) | 10, 451, 1315, 1531, 1841, 2806, 2907, 3199 |
| EcoRV | GATATC | 4 cut(s) | 1013, 1728, 2518, 2791 |
| EcoT14I | CCWWGG | 4 cut(s) | 946, 2948, 3154, 3870 |
| EcoT22I | ATGCAT | 2 cut(s) | 2068, 2330 |
| EcoT38I | GRGCYC | 4 cut(s) | 554, 1618, 1680, 3145 |
| ErhI | CCWWGG | 4 cut(s) | 946, 2948, 3154, 3870 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 753, 785, 946, 978, 1364, 1396, 3387, 3419 |
| FaqI | GGGAC | 1 cut(s) | 1176 |
| FauI | CCCGC | 1 cut(s) | 1742 |
| FauNDI | CATATG | 1 cut(s) | 2536 |
| FblI | GTMKAC | 2 cut(s) | 140, 293 |
| FokI | GGATG | 5 cut(s) | 1019, 1727, 2088, 3613, 3720 |
| FriOI | GRGCYC | 4 cut(s) | 554, 1618, 1680, 3145 |
| GlaI | GCGC | 1 cut(s) | 1469 |
| GsaI | CCCAGC | 1 cut(s) | 2921 |
| GsuI | CTGGAG | 3 cut(s) | 2049, 2790, 2945 |
| HaeIII | GGCC | 7 cut(s) | 1531, 1548, 2719, 2916, 2953, 3153, 3366 |
| HapII | CCGG | 6 cut(s) | 289, 1050, 2630, 2822, 3441, 3741 |
| HgaI | GACGC | 2 cut(s) | 2773, 3065 |
| HhaI | GCGC | 1 cut(s) | 1470 |
| Hin1I | GRCGYC | 1 cut(s) | 2784 |
| Hin6I | GCGC | 1 cut(s) | 1468 |
| HinP1I | GCGC | 1 cut(s) | 1468 |
| HincII | GTYRAC | 3 cut(s) | 141, 1450, 1912 |
| HindII | GTYRAC | 3 cut(s) | 141, 1450, 1912 |
| HindIII | AAGCTT | 3 cut(s) | 233, 1666, 3401 |
| HpaII | CCGG | 6 cut(s) | 289, 1050, 2630, 2822, 3441, 3741 |
| HphI | GGTGA | 7 cut(s) | 340, 1319, 1648, 2683, 3760, 3772, 3793 |
| Hpy166II | GTNNAC | 9 cut(s) | 141, 294, 348, 371, 1021, 1450, 1912, 2281, 3460 |
| Hpy8I | GTNNAC | 9 cut(s) | 141, 294, 348, 371, 1021, 1450, 1912, 2281, 3460 |
| Hpy99I | CGWCG | 4 cut(s) | 142, 145, 2203, 2789 |
| HpyAV | CCTTC | 6 cut(s) | 379, 515, 1429, 2034, 2568, 3053 |
| HpyCH4IV | ACGT | 4 cut(s) | 189, 2402, 2998, 3462 |
| HpySE526I | ACGT | 4 cut(s) | 189, 2402, 2998, 3462 |
| Hsp92I | GRCGYC | 1 cut(s) | 2784 |
| HspAI | GCGC | 1 cut(s) | 1468 |
| LguI | GCTCTTC | 2 cut(s) | 267, 3150 |
| LweI | GCATC | 9 cut(s) | 493, 580, 988, 1763, 2267, 2315, 2536, 2642, 3635 |
| MabI | ACCWGGT | 1 cut(s) | 451 |
| MaeII | ACGT | 4 cut(s) | 189, 2402, 2998, 3462 |
| MaeIII | GTNAC | 6 cut(s) | 132, 489, 633, 877, 1285, 3781 |
| MbiI | CCGCTC | 2 cut(s) | 2896, 3775 |
| MfeI | CAATTG | 3 cut(s) | 494, 833, 903 |
| MflI | RGATCY | 9 cut(s) | 823, 917, 1150, 1904, 1991, 2205, 2360, 3183, 3535 |
| MhlI | GDGCHC | 8 cut(s) | 554, 1088, 1618, 1680, 2453, 3145, 3232, 3595 |
| MlsI | TGGCCA | 2 cut(s) | 2719, 3153 |
| MluNI | TGGCCA | 2 cut(s) | 2719, 3153 |
| MlyI | GAGTC | 7 cut(s) | 539, 1579, 2011, 2276, 3385, 3760, 3820 |
| MmeI | TCCRAC | 7 cut(s) | 308, 750, 1153, 1384, 1751, 2181, 3118 |
| Mox20I | TGGCCA | 2 cut(s) | 2719, 3153 |
| Mph1103I | ATGCAT | 2 cut(s) | 2068, 2330 |
| MroXI | GAANNNNTTC | 5 cut(s) | 119, 2166, 2388, 2578, 3261 |
| MscI | TGGCCA | 2 cut(s) | 2719, 3153 |
| MslI | CAYNNNNRTG | 3 cut(s) | 366, 1430, 3174 |
| Msp20I | TGGCCA | 2 cut(s) | 2719, 3153 |
| MspA1I | CMGCKG | 2 cut(s) | 2666, 3902 |
| MspI | CCGG | 6 cut(s) | 289, 1050, 2630, 2822, 3441, 3741 |
| MunI | CAATTG | 3 cut(s) | 494, 833, 903 |
| Mva1269I | GAATGC | 3 cut(s) | 1917, 2066, 3112 |
| MvaI | CCWGG | 8 cut(s) | 12, 453, 1317, 1533, 1843, 2808, 2909, 3201 |
| MvnI | CGCG | 1 cut(s) | 3677 |
| NciI | CCSGG | 2 cut(s) | 289, 2630 |
| NcoI | CCATGG | 2 cut(s) | 946, 3154 |
| NdeI | CATATG | 1 cut(s) | 2536 |
| NheI | GCTAGC | 1 cut(s) | 3850 |
| NlaIV | GGNNCC | 8 cut(s) | 9, 1152, 1164, 1329, 1617, 1947, 2146, 2984 |
| NmuCI | GTSAC | 2 cut(s) | 489, 3781 |
| NruI | TCGCGA | 1 cut(s) | 3677 |
| NsiI | ATGCAT | 2 cut(s) | 2068, 2330 |
| NspI | RCATGY | 5 cut(s) | 1198, 1444, 1468, 1879, 2962 |
| NspV | TTCGAA | 2 cut(s) | 737, 842 |
| PaeI | GCATGC | 1 cut(s) | 2962 |
| PaeR7I | CTCGAG | 2 cut(s) | 547, 1679 |
| PagI | TCATGA | 2 cut(s) | 390, 2700 |
| PciSI | GCTCTTC | 2 cut(s) | 267, 3150 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1523 |
| PctI | GAATGC | 3 cut(s) | 1917, 2066, 3112 |
| PdmI | GAANNNNTTC | 5 cut(s) | 119, 2166, 2388, 2578, 3261 |
| PfeI | GAWTC | 8 cut(s) | 1253, 1551, 2094, 3064, 3159, 3205, 3262, 3611 |
| PfoI | TCCNGGA | 2 cut(s) | 10, 2806 |
| PinAI | ACCGGT | 2 cut(s) | 1049, 3440 |
| PleI | GAGTC | 7 cut(s) | 539, 1578, 2011, 2276, 3385, 3759, 3819 |
| PpsI | GAGTC | 7 cut(s) | 539, 1578, 2011, 2276, 3385, 3759, 3819 |
| PpuMI | RGGWCCY | 2 cut(s) | 1163, 1300 |
| PshBI | ATTAAT | 1 cut(s) | 1077 |
| Psp124BI | GAGCTC | 3 cut(s) | 554, 1680, 3145 |
| Psp1406I | AACGTT | 2 cut(s) | 189, 2998 |
| Psp5II | RGGWCCY | 2 cut(s) | 1163, 1300 |
| Psp6I | CCWGG | 8 cut(s) | 10, 451, 1315, 1531, 1841, 2806, 2907, 3199 |
| PspFI | CCCAGC | 1 cut(s) | 2917 |
| PspGI | CCWGG | 8 cut(s) | 10, 451, 1315, 1531, 1841, 2806, 2907, 3199 |
| PspN4I | GGNNCC | 8 cut(s) | 9, 1152, 1164, 1329, 1617, 1947, 2146, 2984 |
| PspPI | GGNCC | 8 cut(s) | 371, 1163, 1300, 2915, 2982, 3457, 3527, 3580 |
| PspPPI | RGGWCCY | 2 cut(s) | 1163, 1300 |
| PspXI | VCTCGAGB | 1 cut(s) | 547 |
| PstI | CTGCAG | 1 cut(s) | 2941 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1573, 1658, 2471, 3081 |
| PsuI | RGATCY | 9 cut(s) | 823, 917, 1150, 1904, 1991, 2205, 2360, 3183, 3535 |
| PvuII | CAGCTG | 2 cut(s) | 2666, 3902 |
| RruI | TCGCGA | 1 cut(s) | 3677 |
| RsaI | GTAC | 3 cut(s) | 170, 1587, 2566 |
| RsaNI | GTAC | 3 cut(s) | 169, 1586, 2565 |
| RseI | CAYNNNNRTG | 3 cut(s) | 366, 1430, 3174 |
| SacI | GAGCTC | 3 cut(s) | 554, 1680, 3145 |
| SalI | GTCGAC | 1 cut(s) | 139 |
| SapI | GCTCTTC | 2 cut(s) | 267, 3150 |
| Sau96I | GGNCC | 8 cut(s) | 371, 1163, 1300, 2915, 2982, 3457, 3527, 3580 |
| SchI | GAGTC | 7 cut(s) | 539, 1579, 2011, 2276, 3385, 3760, 3820 |
| SduI | GDGCHC | 8 cut(s) | 554, 1088, 1618, 1680, 2453, 3145, 3232, 3595 |
| SexAI | ACCWGGT | 1 cut(s) | 451 |
| SfaNI | GCATC | 9 cut(s) | 493, 580, 988, 1763, 2267, 2315, 2536, 2642, 3635 |
| SfcI | CTRYAG | 4 cut(s) | 1737, 2598, 2937, 3192 |
| Sfr274I | CTCGAG | 2 cut(s) | 547, 1679 |
| SfuI | TTCGAA | 2 cut(s) | 737, 842 |
| SgrDI | CGTCGACG | 1 cut(s) | 139 |
| SinI | GGWCC | 7 cut(s) | 371, 1163, 1300, 2982, 3457, 3527, 3580 |
| SlaI | CTCGAG | 2 cut(s) | 547, 1679 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 366, 1430, 3174 |
| SmlI | CTYRAG | 6 cut(s) | 60, 332, 547, 573, 1679, 3393 |
| SmoI | CTYRAG | 6 cut(s) | 60, 332, 547, 573, 1679, 3393 |
| SpeI | ACTAGT | 1 cut(s) | 1028 |
| SphI | GCATGC | 1 cut(s) | 2962 |
| SspI | AATATT | 2 cut(s) | 409, 2491 |
| SstI | GAGCTC | 3 cut(s) | 554, 1680, 3145 |
| StyI | CCWWGG | 4 cut(s) | 946, 2948, 3154, 3870 |
| TaiI | ACGT | 4 cut(s) | 192, 2405, 3001, 3465 |
| TaqII | GACCGA | 2 cut(s) | 2235, 3531 |
| TatI | WGTACW | 1 cut(s) | 2564 |
| TauI | GCSGC | 5 cut(s) | 1631, 2849, 3639, 3642, 3775 |
| TfiI | GAWTC | 8 cut(s) | 1253, 1551, 2094, 3064, 3159, 3205, 3262, 3611 |
| TscAI | CASTG | 8 cut(s) | 563, 699, 1795, 2181, 2749, 3094, 3348, 3708 |
| TseFI | GTSAC | 2 cut(s) | 489, 3781 |
| Tsp45I | GTSAC | 2 cut(s) | 489, 3781 |
| TspGWI | ACGGA | 6 cut(s) | 31, 158, 904, 3206, 3238, 3366 |
| TspRI | CASTG | 8 cut(s) | 563, 699, 1795, 2181, 2749, 3094, 3348, 3708 |
| VpaK11BI | GGWCC | 7 cut(s) | 371, 1163, 1300, 2982, 3457, 3527, 3580 |
| VspI | ATTAAT | 1 cut(s) | 1077 |
| XceI | RCATGY | 5 cut(s) | 1198, 1444, 1468, 1879, 2962 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 904 |
| XhoI | CTCGAG | 2 cut(s) | 547, 1679 |
| XmiI | GTMKAC | 2 cut(s) | 140, 293 |
| XmnI | GAANNNNTTC | 5 cut(s) | 119, 2166, 2388, 2578, 3261 |
| Zsp2I | ATGCAT | 2 cut(s) | 2068, 2330 |