Rh4BG215000

Mediator of RNA polymerase II transcription subunit 33A-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
37417727 .. 37425591
7865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG215000.1

Sequence Viewer

Length: 3948 bp
ATGGAGGTGTCTGGTATCTGGGATAGTGTGGTGGAGTTAACCAAAGTGGCCCAACAAAAGGGTAGTGATCCTCTGGTTTGGGTAATACAGTTGTCCTCCAACTTGGGATCAAGGGGAGTGTCTATGCCCTCAGTGGAGCTAGCCAATGTATTGGTTTCCCACATTTGCTGGGAAAATAATGTGCCCATTATGTGGAAGTTTCTGGAGAAGGCCTTGATGTTAAATATTGTGCCTCCAATGCTTGTTCTTGCTCTTCTTTCAAAAAGGGTCATTCCAAGTCGATGTTCCCAGCCAGTGGCTTATAGACTTTACATGGAACTCCTTAAGAGACACATTTTTACCCTTAAGTCTCAGATAAATGGGCCAAATTATCAAATGATCATGAAATCAATAGATTCTGTTCTTCATCTTTCTGGAATATTTGGTCTTCCAGTGAGTGAACCTGGAGTTCTTGTGGTCGAGTTTTTATTTGCAATTGTGTGGCAATTGCTTGATGCATCATTAGACGATGAAGGGTTGTTGAACCGAACCCTGGAAAAGAAGTCCAGATGGGAAATTGAACATCAAGAAATGGAGATAGACTACCATGGTAGTTATTATGAGAAGAGGAGGGAATACAATGAGATAATGCAGGATGCAAATACTGTCATGGCTATTGAGATAATTGGGCAATTCCTTCAAAGTAAAGTAACATCAAGAATTCTTTACCTGGCTCGCCGACACTTGCCTGCACATTGGACAAGTTTTATTCAGCGGTTACAGTTGCTTGCATCAAACTCATTAGCAATAAGAAATTCAAAAACTCTTACTCCAGAGGCTCTTATGCTGTTGACTTCAAGCAGTCACTTCGTATTGTCTCGAGAATACAAAACAAGTTCTTTGCAAAAGTTTCATGCAGTTATGGCTTCTGGTTCTCTGGTTTCTTCTGGTCTGTGCAATGGGGCTAGTCGTTCTGCTTTGTGGCTTCCTCTTGATCTTGTATTAGAAGATGCAATGGATGGTTATCAAGTTGACGCTACGAGTGCTGTTGAAAATATTACTGGCCTGATTAATACCCTTCAAGCAATAAATGGCACAAGTTGGCATGACACCTTTTTAGGTCTTTGGATAGCAGCTCTTCGCCTTGTACAAAGGGAAAGGGACCCAATAGAGGGCCCTGTGCCTCGCCTAGACACTCGCTTATGCATGCTGTTGTGTATCACAACACTTGTGGTGGCTAATCTGATTGAGGAGGAAACTTTACCAACCAATGAAGTAGAATGTGGTTCCATCAACAGCTGGAAAGAAAAAGAGCTTCCAGGAAACCGCCGCCATGATTTAGTCTCCAGCTTACAGGTGTTGGGTGATTATCAGGGTTTGCTGACTCCTCCTCAATCTGTTGTTTCTGCTGCCAATCAGGCTGCTGCAAAAGCGATGCTGATTCTTTCAGGTGTCAGTATTGGGAGTGCATACTTTGAGTGCATCAGTATGAAGGAAATGCCCATCAACTTTTCTGGAAACATGCGCCATCTGATAGTTGAGGCCTGCATTGCTAGAAATCTACTGGACACATCTGCATATTCCTGGCCAGGTTATGTCAATGGACGTATAAACCAGTTACCTCATGGTGTGCCAACTCAAGTGCCTGGCTGGTCAACATTTATGCTGGTGGCTACCCTTACTCCAGTCGTGGTTAATGCTTTGGTTTCAACTCCTGCTTCAAGCTTAGCAGAAATCGAGAAAGTATTTGCGATTGCAATCAATGGATCAGACGATGAGAAGATATCTGCTGCTACCATTTTATGTGGGGCCTCACTGCTTAGGGGTTGGAATATACAGGAGCATACTGCTCATTTTATCATTCAATTATTGTCTCCTCCGGTTCCTGCTGATTATTCTGGGAGTGATAGCCATTTGATAGGTTATGCTCCAATGCTGAACGTCCTCATTGTTGGAATAGCATCTGTTGACTGCGTTCAGATTTTCTCTTTACATGGCTTGGTCCCACAACTTGCATGTTCGTTGATGCCAATTTGTGAGGTGTTTGGTTCATGTGTTCCCAATTTCTCTTGGACTCTAGCAACAGGAGAAGAAATCTCTGCCCATGCTGTGTTTTCAAATGCATTCACTCTCCTTCTGAAGCTCTGGAGGTTTAATCATCCTCCTCTTGAGCATGGGGTAGGAGATGTACCCACAGTTGCATCCCGACTAACACCTGAGTACCTCCTGTCAGTAAGAAACTCTTACCTGGTATCTTCTGTAACTGCTCACCAGGATCGAAATAAAAGGAGATTGTCTGCTGTTGCAACTTCATCATATCCAGAACCTGTATTTGTAGACTCTTTTCCAAAACTAAAAGTTTGGTATCGGCAGCATCAAGCATGTATAGCCTCAACACTCTCTGGTCTTGTGCATGGAACCCCTGTCCATCAGATTGTTGATGAGCTTCTTAACATGATGTTCAAAAAGCTCAGTAGAGGAAACCAGTCTGGAACTTCTGTGAATTCTCCAAGTGGTAGTTCTTCTGGACCTGGAAACGAAGACAACTCTCTAAGACCTAAATTACCTGCTTGGGATATCCTAGAAGCTGTTCCCTTTGTGGTTGATGCTGCTCTAACAGCCTGTGCTCATGGAAGACTTTCTCCTCGTGAGCTGGCTACAGGGCTTAAAGATTTAGCTGATTTTCTTCCTGCATGTTTGGCGACCATTGTGAGCTACTTTTCTGCTGAAGTAACTCGAGGAATTTGGAAACCAGTTTTTATGAATGGAACTGACTGGCCCAGTCCGGCTGTGAATCTATCCTATGTTGAGGAACAGATCAAGAAAATCCTAGCTGCTACTGGTGTTGATATCCCTAGCCTTGCTGCAGGGACAAGCTCTCCAGCTACACTTCCACTACCTCTAGCTGCCTTTGTAAGTGTTACCATTACATACAAGATCGACAGAGCATCAGAACGTTTCCTCAGTTTGGCTGGCCCCACCTTGGAGTCCCTTGCAGCTGGTTGTCCATGGCCTTGTATGCCAATTGTGGCATCTCTGTGGACTCAAAAGGCGAAGCGATGGAGTGACTTCCTTGTCTTCTCTGCATCTCGAACCGTTTTCCTGCAGAACAGCCAGTCAGTGGTTCAGCTTCTTAAAAGCTGCTTTACTGCGACACTTGGCCTGGATGCCACTCCAACCTCAAGCAATGGTGGTGTGGGAGCACTTCTTGGCCATGGATTCGGATCCCATTTCTGTGGTGAAATTTCACCTGTTGCACCAGGAATTCTTTATCTACGTGTGTACCGGTCAATAGCAGATATTGTCTTCATGACCGAAGAGATTGTTACCATCTTGATGCTTTCTGTAAGAGAGATAGCATGTAGTGTGCTTCCCAAGTCAAAGACCACAAATGGAATGAGATATGGACAGGTTTCACTTGCTACAGCAATGACTCAGGTGAAACTAGCAGCTTCACTTGGGGCGTCTTTAGTATGGTTAACAGGAGGCTTGTGTCTGGTTCAGTCATTGATTAAAGAAACTTTGCCTTCTTGGTTTATATCTATGCACTGGTCTGAGCAGAAACAAGGGTCAGAAGGAATGGTAGCCATGCTTGGGGGCTATGCACTTGCATACTTTGCAGTGCTCTGTGGAGCCTTTGCTTGGGGAGTTGATTCATCATCAGCAGCATCAAAACGGCGGCCTAAAATCCTTGGCACCCACATGGAATTTCTTGCAAGTGCACTTGATGGGAAGATATCACTTGGTTGTGATTCGGCAACGTGGCGTGCCTACGTGTCTGGTTTCGTAACTCTAATGGTAGGCTGCACACCAAATTGGATGCTAGAAATGGATGTACAAGTATTGAAGAGACTGAGTAATGGTCTAAGGAAATGGAATGAGGAAGAACTTGCTATAGCCTTGTTGGAGATTGGTGGAGTTGGTACAATGGGTGCAGCTGCCGAACTCATAGTTGAAAATGAGATGTAA

Protein Analysis

1315

Amino Acids

143.3

Weight (kDa)

6.16

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3053
Acc36I ACCTGC 1 cut(s) 2554
AccB1I GGYRCC 1 cut(s) 3674
AccB7I CCANNNNNTGG 3 cut(s) 192, 295, 3100
AccI GTMKAC 1 cut(s) 2316
AciI CCGC 4 cut(s) 754, 1306, 1309, 3658
AclI AACGTT 1 cut(s) 2935
AclWI GGATC 6 cut(s) 62, 115, 1753, 2262, 3198, 3211
AcoI YGGCCR 2 cut(s) 1565, 3190
AcsI RAATTY 7 cut(s) 699, 793, 2482, 2721, 3222, 3243, 3686
AcuI CTGAAG 2 cut(s) 2138, 2727
AcyI GRCGYC 1 cut(s) 3443
AfaI GTAC 6 cut(s) 1128, 2169, 2201, 3263, 3816, 3904
AflII CTTAAG 2 cut(s) 323, 344
AflIII ACRYGT 2 cut(s) 3256, 3753
AgeI ACCGGT 1 cut(s) 3264
AjuI GAANNNNNNNTTGG 4 cut(s) 268, 300, 2482, 2514
Alw21I GWGCWC 4 cut(s) 2608, 3184, 3606, 3703
Alw26I GTCTC 6 cut(s) 322, 354, 861, 1327, 1857, 3823
Alw44I GTGCAC 1 cut(s) 3699
AlwI GGATC 6 cut(s) 62, 115, 1753, 2262, 3198, 3211
AlwNI CAGNNNCTG 1 cut(s) 2306
Ama87I CYCGRG 2 cut(s) 858, 2715
ApaI GGGCCC 1 cut(s) 1157
ApaLI GTGCAC 1 cut(s) 3699
ApoI RAATTY 7 cut(s) 699, 793, 2482, 2721, 3222, 3243, 3686
AseI ATTAAT 1 cut(s) 1050
AsiGI ACCGGT 1 cut(s) 3264
Asp700I GAANNNNTTC 2 cut(s) 2568, 2617
AspLEI GCGC 1 cut(s) 1506
AsuHPI GGTGA 5 cut(s) 1355, 2240, 3219, 3230, 3430
AsuNHI GCTAGC 1 cut(s) 139
AvaI CYCGRG 2 cut(s) 858, 2715
AvaII GGWCC 3 cut(s) 1141, 1981, 2507
BaeGI GKGCMC 3 cut(s) 186, 1157, 3703
BaeI ACNNNNGTAYC 4 cut(s) 2183, 2216, 3245, 3278
BalI TGGCCA 2 cut(s) 1567, 3192
BamHI GGATCC 1 cut(s) 3203
BanI GGYRCC 1 cut(s) 3674
BanII GRGCYC 1 cut(s) 1157
BauI CACGAG 1 cut(s) 2625
BbsI GAAGAC 5 cut(s) 419, 2526, 2620, 3049, 3277
Bbv12I GWGCWC 4 cut(s) 2608, 3184, 3606, 3703
BccI CCATC 9 cut(s) 543, 992, 1277, 1490, 1515, 2415, 3033, 3317, 3701
BceAI ACGGC 1 cut(s) 3671
BcgI CGANNNNNNTGC 2 cut(s) 829, 863
BclI TGATCA 1 cut(s) 378
BcoDI GTCTC 6 cut(s) 322, 354, 861, 1327, 1857, 3823
BfmI CTRYAG 5 cut(s) 2637, 2844, 3083, 3402, 3873
BfrI CTTAAG 2 cut(s) 323, 344
BfuAI ACCTGC 1 cut(s) 2554
BglI GCCNNNNNGGC 1 cut(s) 1397
BlpI GCTNAGC 1 cut(s) 1705
Bme18I GGWCC 3 cut(s) 1141, 1981, 2507
BmeT110I CYCGRG 2 cut(s) 858, 2715
BmrI ACTGGG 1 cut(s) 2754
BmtI GCTAGC 1 cut(s) 143
BmuI ACTGGG 1 cut(s) 2754
BpiI GAAGAC 5 cut(s) 419, 2526, 2620, 3049, 3277
BpmI CTGGAG 7 cut(s) 224, 465, 795, 1309, 1647, 2146, 2844
Bpu10I CCTNAGC 1 cut(s) 1799
Bpu1102I GCTNAGC 1 cut(s) 1705
BpuEI CTTGAG 3 cut(s) 1602, 2168, 3145
BsaAI YACGTR 2 cut(s) 3257, 3754
BsaBI GATNNNNATC 3 cut(s) 1002, 1736, 3202
BsaHI GRCGYC 1 cut(s) 3443
BsaJI CCNNGG 6 cut(s) 531, 586, 2961, 2987, 3193, 3670
BsaWI WCCGGW 2 cut(s) 1858, 3264
BsaXI ACNNNNNCTCC 8 cut(s) 438, 468, 793, 823, 1645, 1675, 2842, 2872
Bse118I RCCGGY 1 cut(s) 3264
Bse3DI GCAATG 5 cut(s) 943, 999, 1527, 3172, 3414
Bse8I GATNNNNATC 3 cut(s) 1002, 1736, 3202
BseDI CCNNGG 6 cut(s) 531, 586, 2961, 2987, 3193, 3670
BseGI GGATG 7 cut(s) 640, 1003, 2137, 2180, 3151, 3804, 3817
BseJI GATNNNNATC 3 cut(s) 1002, 1736, 3202
BseMI GCAATG 5 cut(s) 943, 999, 1527, 3172, 3414
BseMII CTCAG 8 cut(s) 144, 365, 2187, 2464, 2956, 3428, 3525, 3824
BseRI GAGGAG 7 cut(s) 622, 1244, 1356, 1359, 1845, 2133, 2613
BseSI GKGCMC 3 cut(s) 186, 1157, 3703
BseYI CCCAGC 2 cut(s) 168, 288
BsgI GTGCAG 3 cut(s) 714, 3769, 3933
BshNI GGYRCC 1 cut(s) 3674
BshTI ACCGGT 1 cut(s) 3264
BsiHKAI GWGCWC 4 cut(s) 2608, 3184, 3606, 3703
BsiHKCI CYCGRG 2 cut(s) 858, 2715
BsiSI CCGG 3 cut(s) 1859, 2765, 3265
BslFI GGGAC 4 cut(s) 1154, 1967, 2863, 2953
BsmAI GTCTC 6 cut(s) 322, 354, 861, 1327, 1857, 3823
BsmFI GGGAC 4 cut(s) 1154, 1967, 2863, 2953
BsmI GAATGC 1 cut(s) 2102
BsoBI CYCGRG 2 cut(s) 858, 2715
Bsp120I GGGCCC 1 cut(s) 1153
Bsp1286I GDGCHC 6 cut(s) 186, 1157, 2608, 3184, 3606, 3703
Bsp1407I TGTACA 2 cut(s) 1126, 3814
Bsp143I GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
Bsp1720I GCTNAGC 1 cut(s) 1705
Bsp19I CCATGG 3 cut(s) 586, 2987, 3193
BspACI CCGC 4 cut(s) 754, 1306, 1309, 3658
BspCNI CTCAG 8 cut(s) 143, 364, 2188, 2463, 2955, 3427, 3526, 3825
BspHI TCATGA 2 cut(s) 381, 3288
BspMAI CTGCAG 2 cut(s) 2848, 3087
BspMI ACCTGC 1 cut(s) 2554
BspOI GCTAGC 1 cut(s) 143
BspPI GGATC 6 cut(s) 62, 115, 1753, 2262, 3198, 3211
BspQI GCTCTTC 2 cut(s) 258, 1122
BspT107I GGYRCC 1 cut(s) 3674
BspTI CTTAAG 2 cut(s) 323, 344
BsrDI GCAATG 5 cut(s) 943, 999, 1527, 3172, 3414
BsrFI RCCGGY 1 cut(s) 3264
BsrGI TGTACA 2 cut(s) 1126, 3814
BssAI RCCGGY 1 cut(s) 3264
BssECI CCNNGG 6 cut(s) 531, 586, 2961, 2987, 3193, 3670
BssMI GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
BssNI GRCGYC 1 cut(s) 3443
BssSI CACGAG 1 cut(s) 2625
BssT1I CCWWGG 5 cut(s) 586, 2961, 2987, 3193, 3670
Bst2BI CACGAG 1 cut(s) 2625
Bst4CI ACNGT 5 cut(s) 90, 646, 762, 2176, 3076
Bst6I CTCTTC 5 cut(s) 258, 599, 1122, 3291, 3821
BstACI GRCGYC 1 cut(s) 3443
BstAFI CTTAAG 2 cut(s) 323, 344
BstAPI GCANNNNNTGC 1 cut(s) 3596
BstAUI TGTACA 2 cut(s) 1126, 3814
BstBAI YACGTR 2 cut(s) 3257, 3754
BstC8I GCNNGC 9 cut(s) 141, 715, 729, 768, 1187, 1525, 2634, 2953, 3747
BstDSI CCRYGG 3 cut(s) 586, 2987, 3193
BstF5I GGATG 7 cut(s) 640, 1003, 2137, 2180, 3151, 3804, 3817
BstHHI GCGC 1 cut(s) 1506
BstKTI GATC 9 cut(s) 70, 110, 381, 976, 1748, 2257, 2799, 2919, 3206
BstMAI GTCTC 6 cut(s) 322, 354, 861, 1327, 1857, 3823
BstMBI GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
BstNSI RCATGY 6 cut(s) 1189, 1504, 1998, 2364, 2676, 3342
BstSFI CTRYAG 5 cut(s) 2637, 2844, 3083, 3402, 3873
BstSLI GKGCMC 3 cut(s) 186, 1157, 3703
BstV2I GAAGAC 5 cut(s) 419, 2526, 2620, 3049, 3277
BstX2I RGATCY 1 cut(s) 3203
BstXI CCANNNNNNTGG 2 cut(s) 151, 3215
BstYI RGATCY 1 cut(s) 3203
BtgI CCRYGG 3 cut(s) 586, 2987, 3193
BtgZI GCGATG 2 cut(s) 1427, 3052
BtsCI GGATG 7 cut(s) 640, 1003, 2137, 2180, 3151, 3804, 3817
BtsI GCAGTG 2 cut(s) 1793, 3606
BtsIMutI CAGTG 7 cut(s) 138, 300, 438, 1793, 3105, 3526, 3606
BveI ACCTGC 1 cut(s) 2554
Cac8I GCNNGC 9 cut(s) 141, 715, 729, 768, 1187, 1525, 2634, 2953, 3747
CaiI CAGNNNCTG 1 cut(s) 2306
CciI TCATGA 2 cut(s) 381, 3288
CfoI GCGC 1 cut(s) 1506
Cfr10I RCCGGY 1 cut(s) 3264
CseI GACGC 2 cut(s) 1022, 3432
CsiI ACCWGGT 1 cut(s) 2226
Csp6I GTAC 6 cut(s) 1127, 2168, 2200, 3262, 3815, 3903
CspAI ACCGGT 1 cut(s) 3264
CspCI CAANNNNNGTGG 2 cut(s) 1191, 1226
CviQI GTAC 6 cut(s) 1127, 2168, 2200, 3262, 3815, 3903
DpnI GATC 9 cut(s) 69, 109, 380, 975, 1747, 2256, 2798, 2918, 3205
DpnII GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
DrdI GACNNNNNNGTC 1 cut(s) 3053
DseDI GACNNNNNNGTC 1 cut(s) 3053
EaeI YGGCCR 2 cut(s) 1565, 3190
Eam1104I CTCTTC 5 cut(s) 258, 599, 1122, 3291, 3821
EarI CTCTTC 5 cut(s) 258, 599, 1122, 3291, 3821
Eco130I CCWWGG 5 cut(s) 586, 2961, 2987, 3193, 3670
Eco147I AGGCCT 2 cut(s) 212, 1523
Eco24I GRGCYC 1 cut(s) 1157
Eco32I GATATC 4 cut(s) 1764, 2557, 2830, 3717
Eco47I GGWCC 3 cut(s) 1141, 1981, 2507
Eco57I CTGAAG 2 cut(s) 2138, 2727
Eco88I CYCGRG 2 cut(s) 858, 2715
EcoO109I RGGNCCY 4 cut(s) 1141, 1153, 1154, 1788
EcoRI GAATTC 3 cut(s) 699, 2482, 3243
EcoRV GATATC 4 cut(s) 1764, 2557, 2830, 3717
EcoT14I CCWWGG 5 cut(s) 586, 2961, 2987, 3193, 3670
EcoT22I ATGCAT 3 cut(s) 499, 1187, 2104
EcoT38I GRGCYC 1 cut(s) 1157
ErhI CCWWGG 5 cut(s) 586, 2961, 2987, 3193, 3670
FalI AAGNNNNNCTT 2 cut(s) 2206, 2238
FaqI GGGAC 4 cut(s) 1154, 1967, 2863, 2953
FbaI TGATCA 1 cut(s) 378
FblI GTMKAC 1 cut(s) 2316
FokI GGATG 7 cut(s) 647, 1010, 2124, 2167, 3158, 3811, 3824
FriOI GRGCYC 1 cut(s) 1157
GlaI GCGC 1 cut(s) 1505
GsaI CCCAGC 2 cut(s) 172, 292
GsuI CTGGAG 7 cut(s) 224, 465, 795, 1309, 1647, 2146, 2844
HapII CCGG 3 cut(s) 1859, 2765, 3265
HgaI GACGC 2 cut(s) 1022, 3432
HhaI GCGC 1 cut(s) 1506
Hin1I GRCGYC 1 cut(s) 3443
Hin6I GCGC 1 cut(s) 1504
HinP1I GCGC 1 cut(s) 1504
HincII GTYRAC 6 cut(s) 39, 831, 1012, 1635, 1948, 3459
HindII GTYRAC 6 cut(s) 39, 831, 1012, 1635, 1948, 3459
HindIII AAGCTT 1 cut(s) 1702
HpaI GTTAAC 2 cut(s) 39, 3459
HpaII CCGG 3 cut(s) 1859, 2765, 3265
HphI GGTGA 5 cut(s) 1355, 2240, 3219, 3230, 3430
HpyAV CCTTC 8 cut(s) 202, 506, 686, 1067, 1465, 2123, 3516, 3548
HpyCH4III ACNGT 5 cut(s) 90, 646, 762, 2176, 3076
HpyCH4IV ACGT 6 cut(s) 1585, 1920, 2935, 3256, 3740, 3753
HpySE526I ACGT 6 cut(s) 1585, 1920, 2935, 3256, 3740, 3753
Hsp92I GRCGYC 1 cut(s) 3443
HspAI GCGC 1 cut(s) 1504
KflI GGGWCCC 1 cut(s) 1141
Ksp22I TGATCA 1 cut(s) 378
KspAI GTTAAC 2 cut(s) 39, 3459
Kzo9I GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
LguI GCTCTTC 2 cut(s) 258, 1122
LmnI GCTCC 5 cut(s) 136, 1819, 1912, 3179, 3611
MabI ACCWGGT 1 cut(s) 2226
MaeII ACGT 6 cut(s) 1585, 1920, 2935, 3256, 3740, 3753
MalI GATC 9 cut(s) 69, 109, 380, 975, 1747, 2256, 2798, 2918, 3205
MboI GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
MfeI CAATTG 3 cut(s) 474, 485, 3003
MflI RGATCY 1 cut(s) 3203
MhlI GDGCHC 6 cut(s) 186, 1157, 2608, 3184, 3606, 3703
MlsI TGGCCA 2 cut(s) 1567, 3192
MluNI TGGCCA 2 cut(s) 1567, 3192
MlyI GAGTC 6 cut(s) 1357, 2047, 2312, 2975, 3016, 3406
MmeI TCCRAC 5 cut(s) 123, 1787, 1912, 3179, 3864
Mox20I TGGCCA 2 cut(s) 1567, 3192
Mph1103I ATGCAT 3 cut(s) 499, 1187, 2104
MroXI GAANNNNTTC 2 cut(s) 2568, 2617
MscI TGGCCA 2 cut(s) 1567, 3192
MslI CAYNNNNRTG 5 cut(s) 1466, 3016, 3213, 3314, 3680
Msp20I TGGCCA 2 cut(s) 1567, 3192
MspA1I CMGCKG 4 cut(s) 754, 1278, 2978, 3917
MspCI CTTAAG 2 cut(s) 323, 344
MspI CCGG 3 cut(s) 1859, 2765, 3265
MunI CAATTG 3 cut(s) 474, 485, 3003
Mva1269I GAATGC 1 cut(s) 2102
NcoI CCATGG 3 cut(s) 586, 2987, 3193
NdeII GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
NheI GCTAGC 1 cut(s) 139
NmuCI GTSAC 2 cut(s) 842, 3044
NsiI ATGCAT 3 cut(s) 499, 1187, 2104
NspI RCATGY 6 cut(s) 1189, 1504, 1998, 2364, 2676, 3342
PaeI GCATGC 1 cut(s) 1189
PaeR7I CTCGAG 2 cut(s) 858, 2715
PagI TCATGA 2 cut(s) 381, 3288
PceI AGGCCT 2 cut(s) 212, 1523
PciSI GCTCTTC 2 cut(s) 258, 1122
PctI GAATGC 1 cut(s) 2102
PdmI GAANNNNTTC 2 cut(s) 2568, 2617
PfeI GAWTC 6 cut(s) 395, 1420, 2773, 3198, 3632, 3731
PflMI CCANNNNNTGG 3 cut(s) 192, 295, 3100
PfoI TCCNGGA 1 cut(s) 1297
PinAI ACCGGT 1 cut(s) 3264
PleI GAGTC 6 cut(s) 1357, 2047, 2312, 2974, 3016, 3406
PpsI GAGTC 6 cut(s) 1357, 2047, 2312, 2974, 3016, 3406
Ppu21I YACGTR 2 cut(s) 3257, 3754
PpuMI RGGWCCY 1 cut(s) 1141
PshBI ATTAAT 1 cut(s) 1050
Psp1406I AACGTT 1 cut(s) 2935
Psp5II RGGWCCY 1 cut(s) 1141
PspFI CCCAGC 2 cut(s) 168, 288
PspOMI GGGCCC 1 cut(s) 1153
PspPPI RGGWCCY 1 cut(s) 1141
PspXI VCTCGAGB 1 cut(s) 2715
PstI CTGCAG 2 cut(s) 2848, 3087
PstNI CAGNNNCTG 1 cut(s) 2306
PsuI RGATCY 1 cut(s) 3203
PvuII CAGCTG 3 cut(s) 1278, 2978, 3917
RsaI GTAC 6 cut(s) 1128, 2169, 2201, 3263, 3816, 3904
RsaNI GTAC 6 cut(s) 1127, 2168, 2200, 3262, 3815, 3903
RseI CAYNNNNRTG 5 cut(s) 1466, 3016, 3213, 3314, 3680
SapI GCTCTTC 2 cut(s) 258, 1122
Sau3AI GATC 9 cut(s) 67, 107, 378, 973, 1745, 2254, 2796, 2916, 3203
SchI GAGTC 6 cut(s) 1357, 2047, 2312, 2975, 3016, 3406
SduI GDGCHC 6 cut(s) 186, 1157, 2608, 3184, 3606, 3703
SexAI ACCWGGT 1 cut(s) 2226
SfcI CTRYAG 5 cut(s) 2637, 2844, 3083, 3402, 3873
Sfr274I CTCGAG 2 cut(s) 858, 2715
SinI GGWCC 3 cut(s) 1141, 1981, 2507
SlaI CTCGAG 2 cut(s) 858, 2715
SmiMI CAYNNNNRTG 5 cut(s) 1466, 3016, 3213, 3314, 3680
SmlI CTYRAG 7 cut(s) 323, 344, 858, 1617, 2147, 2715, 3160
SmoI CTYRAG 7 cut(s) 323, 344, 858, 1617, 2147, 2715, 3160
SphI GCATGC 1 cut(s) 1189
SseBI AGGCCT 2 cut(s) 212, 1523
SsiI CCGC 4 cut(s) 754, 1306, 1309, 3658
SspI AATATT 3 cut(s) 226, 420, 1036
StuI AGGCCT 2 cut(s) 212, 1523
StyI CCWWGG 5 cut(s) 586, 2961, 2987, 3193, 3670
TaaI ACNGT 5 cut(s) 90, 646, 762, 2176, 3076
TaiI ACGT 6 cut(s) 1588, 1923, 2938, 3259, 3743, 3756
TaqI TCGA 8 cut(s) 280, 459, 859, 1716, 2257, 2716, 2919, 3070
TaqII GACCGA 1 cut(s) 3308
TatI WGTACW 2 cut(s) 1126, 3814
TauI GCSGC 2 cut(s) 1311, 3661
TfiI GAWTC 6 cut(s) 395, 1420, 2773, 3198, 3632, 3731
TscAI CASTG 7 cut(s) 138, 300, 438, 1800, 3105, 3533, 3606
TseFI GTSAC 2 cut(s) 842, 3044
Tsp45I GTSAC 2 cut(s) 842, 3044
TspRI CASTG 7 cut(s) 138, 300, 438, 1800, 3105, 3533, 3606
Van91I CCANNNNNTGG 3 cut(s) 192, 295, 3100
Vha464I CTTAAG 2 cut(s) 323, 344
VneI GTGCAC 1 cut(s) 3699
VpaK11BI GGWCC 3 cut(s) 1141, 1981, 2507
VspI ATTAAT 1 cut(s) 1050
XapI RAATTY 7 cut(s) 699, 793, 2482, 2721, 3222, 3243, 3686
XceI RCATGY 6 cut(s) 1189, 1504, 1998, 2364, 2676, 3342
XcmI CCANNNNNNNNNTGG 1 cut(s) 1601
XhoI CTCGAG 2 cut(s) 858, 2715
XmiI GTMKAC 1 cut(s) 2316
XmnI GAANNNNTTC 2 cut(s) 2568, 2617
Zsp2I ATGCAT 3 cut(s) 499, 1187, 2104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.