Mediator of RNA polymerase II transcription subunit 33A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23590 |
| fragaria_vesca | FvH4_4g14380 FvH4_4g14390 |
| malus_domestica | MD13G1182100.v1.1 MD13G1182200.v1.1 MD16G1182600.v1.1 |
| prunus_persica | Prupe.1G150000_v2.0.a1 Prupe.1G150000_v2.0.a1 Prupe.1G150100_v2.0.a1 |
| pyrus_communis | pycom13g15720 pycom16g15330 |
| rosa_chinensis | RchiOBHm_Chr4g0418521 RchiOBHm_Chr4g0418541 |
| rosa_laevigata | RLG00000007855 RLG00000007856 |
| rosa_multiflora | Rmu_sc0000363.1_g000040 Rmu_sc0001879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00361790 Rroxscaffold_5G00361800 |
| rosa_rugosa | Rorug04G0154000 Rorug04G0154100.1 |
| rosa_samantha | Rh4AG215600 Rh4AG215700 Rh4BG215000 Rh4BG215100 Rh4CG227200 Rh4CG227300 Rh4DG213900 Rh4DG214000 |
| rosa_wichuraiana | Rw4G018240 Rw4G018250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 833 |
| AarI | CACCTGC | 1 cut(s) | 2849 |
| AatII | GACGTC | 1 cut(s) | 3691 |
| Acc36I | ACCTGC | 1 cut(s) | 2849 |
| AccB1I | GGYRCC | 1 cut(s) | 1799 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 201, 304, 3051 |
| AccBSI | CCGCTC | 1 cut(s) | 3944 |
| AccI | GTMKAC | 2 cut(s) | 289, 3846 |
| AccII | CGCG | 1 cut(s) | 3270 |
| AciI | CCGC | 9 cut(s) | 1321, 1382, 1398, 1566, 1797, 3606, 3775, 3944, 3948 |
| AcoI | YGGCCR | 4 cut(s) | 660, 1577, 3202, 3945 |
| AcsI | RAATTY | 6 cut(s) | 427, 680, 708, 802, 2230, 2817 |
| AcuI | CTGAAG | 3 cut(s) | 251, 828, 2739 |
| AcyI | GRCGYC | 3 cut(s) | 1800, 3688, 3927 |
| AdeI | CACNNNGTG | 1 cut(s) | 1355 |
| AfaI | GTAC | 7 cut(s) | 538, 741, 1137, 2181, 2213, 3339, 3934 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 201, 304, 1160, 1631, 2959, 2974, 3051, 3103, 3651 |
| AflII | CTTAAG | 2 cut(s) | 332, 2657 |
| AflIII | ACRYGT | 2 cut(s) | 3268, 3849 |
| AgeI | ACCGGT | 2 cut(s) | 1049, 2831 |
| AhlI | ACTAGT | 1 cut(s) | 2743 |
| AjiI | CACGTC | 1 cut(s) | 3850 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 277, 309, 2494, 2526 |
| AleI | CACNNNNGTG | 1 cut(s) | 1384 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2400, 2432 |
| Alw21I | GWGCWC | 6 cut(s) | 150, 2260, 2620, 3733, 3834, 3957 |
| Alw44I | GTGCAC | 1 cut(s) | 3729 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1351 |
| Ama87I | CYCGRG | 7 cut(s) | 867, 1727, 2727, 3444, 3467, 3787, 3833 |
| ApaLI | GTGCAC | 1 cut(s) | 3729 |
| ApoI | RAATTY | 6 cut(s) | 427, 680, 708, 802, 2230, 2817 |
| AseI | ATTAAT | 2 cut(s) | 1808, 2463 |
| AsiGI | ACCGGT | 2 cut(s) | 1049, 2831 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 408, 2580, 2629 |
| AspLEI | GCGC | 2 cut(s) | 1320, 1802 |
| AspS9I | GGNCC | 8 cut(s) | 371, 1163, 1634, 2519, 2769, 2966, 3115, 3777 |
| AsuHPI | GGTGA | 5 cut(s) | 1367, 2252, 3460, 3820, 3899 |
| AsuII | TTCGAA | 2 cut(s) | 806, 2108 |
| AvaI | CYCGRG | 7 cut(s) | 867, 1727, 2727, 3444, 3467, 3787, 3833 |
| AvaII | GGWCC | 3 cut(s) | 1163, 2519, 3115 |
| BaeGI | GKGCMC | 4 cut(s) | 61, 195, 243, 3733 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2195, 2228 |
| BalI | TGGCCA | 3 cut(s) | 662, 1579, 3204 |
| BamHI | GGATCC | 3 cut(s) | 1757, 3215, 3255 |
| BanI | GGYRCC | 1 cut(s) | 1799 |
| BanII | GRGCYC | 3 cut(s) | 150, 3196, 3957 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 868, 900, 2497, 2529, 2661, 2693 |
| BauI | CACGAG | 1 cut(s) | 2637 |
| BbsI | GAAGAC | 3 cut(s) | 2538, 3289, 3395 |
| Bbv12I | GWGCWC | 6 cut(s) | 150, 2260, 2620, 3733, 3834, 3957 |
| BccI | CCATC | 8 cut(s) | 203, 904, 1001, 1812, 2426, 3045, 3731, 3799 |
| BceAI | ACGGC | 1 cut(s) | 3339 |
| BciVI | GTATCC | 2 cut(s) | 1161, 3716 |
| BclI | TGATCA | 1 cut(s) | 3519 |
| BcuI | ACTAGT | 1 cut(s) | 2743 |
| BfmI | CTRYAG | 4 cut(s) | 819, 1343, 2649, 2856 |
| BfoI | RGCGCY | 2 cut(s) | 1321, 1803 |
| BfrI | CTTAAG | 2 cut(s) | 332, 2657 |
| BfuAI | ACCTGC | 1 cut(s) | 2849 |
| BfuI | GTATCC | 2 cut(s) | 1161, 3716 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1409 |
| BglII | AGATCT | 1 cut(s) | 920 |
| BlpI | GCTNAGC | 2 cut(s) | 1717, 3951 |
| Bme18I | GGWCC | 3 cut(s) | 1163, 2519, 3115 |
| BmeT110I | CYCGRG | 7 cut(s) | 867, 1727, 2727, 3444, 3467, 3787, 3833 |
| BmgBI | CACGTC | 1 cut(s) | 3850 |
| BmgT120I | GGNCC | 8 cut(s) | 371, 1163, 1634, 2519, 2769, 2966, 3115, 3777 |
| BmrI | ACTGGG | 2 cut(s) | 1361, 2766 |
| BmuI | ACTGGG | 2 cut(s) | 1361, 2766 |
| BpiI | GAAGAC | 3 cut(s) | 2538, 3289, 3395 |
| BpmI | CTGGAG | 6 cut(s) | 233, 1321, 1659, 2295, 2856, 3080 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1717, 3951 |
| Bpu14I | TTCGAA | 2 cut(s) | 806, 2108 |
| BpuEI | CTTGAG | 2 cut(s) | 2180, 3157 |
| Bsa29I | ATCGAT | 2 cut(s) | 398, 3281 |
| BsaAI | YACGTR | 1 cut(s) | 3704 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1011, 3214 |
| BsaHI | GRCGYC | 3 cut(s) | 1800, 3688, 3927 |
| BsaI | GGTCTC | 2 cut(s) | 13, 169 |
| BsaJI | CCNNGG | 9 cut(s) | 120, 451, 452, 1002, 2562, 2973, 2999, 3205, 3251 |
| BsaWI | WCCGGW | 3 cut(s) | 1049, 1870, 2831 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 101, 131, 1657, 1687, 3850, 3880 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 201, 304, 1160, 1631, 2959, 2974, 3051, 3103, 3651 |
| Bse118I | RCCGGY | 2 cut(s) | 1049, 2831 |
| Bse1I | ACTGG | 8 cut(s) | 302, 940, 1356, 1560, 1606, 1701, 2476, 2772 |
| Bse3DI | GCAATG | 7 cut(s) | 1330, 1431, 1686, 3184, 3411, 3444, 3603 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1011, 3214 |
| BseCI | ATCGAT | 2 cut(s) | 398, 3281 |
| BseDI | CCNNGG | 9 cut(s) | 120, 451, 452, 1002, 2562, 2973, 2999, 3205, 3251 |
| BseGI | GGATG | 6 cut(s) | 1012, 1601, 1823, 1900, 2149, 3847 |
| BseJI | GATNNNNATC | 2 cut(s) | 1011, 3214 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 201, 304, 1160, 1631, 2959, 2974, 3051, 3103, 3651 |
| BseMI | GCAATG | 7 cut(s) | 1330, 1431, 1686, 3184, 3411, 3444, 3603 |
| BseMII | CTCAG | 8 cut(s) | 153, 374, 1758, 2199, 2968, 3854, 3866, 3942 |
| BseNI | ACTGG | 8 cut(s) | 302, 940, 1356, 1560, 1606, 1701, 2476, 2772 |
| BseRI | GAGGAG | 7 cut(s) | 631, 1253, 1256, 2145, 2293, 2625, 3871 |
| BseSI | GKGCMC | 4 cut(s) | 61, 195, 243, 3733 |
| BseX3I | CGGCCG | 1 cut(s) | 3945 |
| BseYI | CCCAGC | 3 cut(s) | 177, 297, 3913 |
| Bsh1236I | CGCG | 1 cut(s) | 3270 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3948 |
| BshNI | GGYRCC | 1 cut(s) | 1799 |
| BshTI | ACCGGT | 2 cut(s) | 1049, 2831 |
| BshVI | ATCGAT | 2 cut(s) | 398, 3281 |
| BsiEI | CGRYCG | 1 cut(s) | 3948 |
| BsiHKAI | GWGCWC | 6 cut(s) | 150, 2260, 2620, 3733, 3834, 3957 |
| BsiHKCI | CYCGRG | 7 cut(s) | 867, 1727, 2727, 3444, 3467, 3787, 3833 |
| BsiSI | CCGG | 5 cut(s) | 1050, 1871, 2681, 2777, 2832 |
| BslFI | GGGAC | 5 cut(s) | 44, 1849, 2532, 2828, 3675 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 201, 304, 1160, 1631, 2959, 2974, 3051, 3103, 3651 |
| BsmFI | GGGAC | 5 cut(s) | 44, 1849, 2532, 2828, 3675 |
| BsmI | GAATGC | 3 cut(s) | 2116, 3163, 3331 |
| Bso31I | GGTCTC | 2 cut(s) | 13, 169 |
| BsoBI | CYCGRG | 7 cut(s) | 867, 1727, 2727, 3444, 3467, 3787, 3833 |
| Bsp119I | TTCGAA | 2 cut(s) | 806, 2108 |
| Bsp1407I | TGTACA | 2 cut(s) | 739, 1135 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1717, 3951 |
| Bsp19I | CCATGG | 3 cut(s) | 120, 1002, 3205 |
| BspACI | CCGC | 9 cut(s) | 1321, 1382, 1398, 1566, 1797, 3606, 3775, 3944, 3948 |
| BspCNI | CTCAG | 8 cut(s) | 152, 373, 1759, 2200, 2967, 3855, 3867, 3943 |
| BspDI | ATCGAT | 2 cut(s) | 398, 3281 |
| BspFNI | CGCG | 1 cut(s) | 3270 |
| BspHI | TCATGA | 3 cut(s) | 390, 574, 3300 |
| BspMAI | CTGCAG | 2 cut(s) | 823, 2860 |
| BspMI | ACCTGC | 1 cut(s) | 2849 |
| BspQI | GCTCTTC | 2 cut(s) | 1131, 3888 |
| BspT104I | TTCGAA | 2 cut(s) | 806, 2108 |
| BspT107I | GGYRCC | 1 cut(s) | 1799 |
| BspTI | CTTAAG | 2 cut(s) | 332, 2657 |
| BspTNI | GGTCTC | 2 cut(s) | 13, 169 |
| BsrBI | CCGCTC | 1 cut(s) | 3944 |
| BsrDI | GCAATG | 7 cut(s) | 1330, 1431, 1686, 3184, 3411, 3444, 3603 |
| BsrFI | RCCGGY | 2 cut(s) | 1049, 2831 |
| BsrGI | TGTACA | 2 cut(s) | 739, 1135 |
| BsrI | ACTGG | 8 cut(s) | 302, 940, 1356, 1560, 1606, 1701, 2476, 2772 |
| BssAI | RCCGGY | 2 cut(s) | 1049, 2831 |
| BssECI | CCNNGG | 9 cut(s) | 120, 451, 452, 1002, 2562, 2973, 2999, 3205, 3251 |
| BssNI | GRCGYC | 3 cut(s) | 1800, 3688, 3927 |
| BssSI | CACGAG | 1 cut(s) | 2637 |
| BssT1I | CCWWGG | 4 cut(s) | 120, 1002, 2973, 3205 |
| Bst2BI | CACGAG | 1 cut(s) | 2637 |
| Bst6I | CTCTTC | 4 cut(s) | 608, 1131, 3303, 3888 |
| BstACI | GRCGYC | 3 cut(s) | 1800, 3688, 3927 |
| BstAFI | CTTAAG | 2 cut(s) | 332, 2657 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1031, 3626 |
| BstAUI | TGTACA | 2 cut(s) | 739, 1135 |
| BstBAI | YACGTR | 1 cut(s) | 3704 |
| BstBI | TTCGAA | 2 cut(s) | 806, 2108 |
| BstDSI | CCRYGG | 3 cut(s) | 120, 1002, 3205 |
| BstF5I | GGATG | 6 cut(s) | 1012, 1601, 1823, 1900, 2149, 3847 |
| BstFNI | CGCG | 1 cut(s) | 3270 |
| BstH2I | RGCGCY | 2 cut(s) | 1321, 1803 |
| BstHHI | GCGC | 2 cut(s) | 1320, 1802 |
| BstMCI | CGRYCG | 1 cut(s) | 3948 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 247, 1031, 1409, 1421, 2378, 2609, 2690, 3010, 3626 |
| BstNSI | RCATGY | 7 cut(s) | 1198, 1492, 1516, 1624, 2010, 2376, 3354 |
| BstSFI | CTRYAG | 4 cut(s) | 819, 1343, 2649, 2856 |
| BstSLI | GKGCMC | 4 cut(s) | 61, 195, 243, 3733 |
| BstSNI | TACGTA | 1 cut(s) | 3704 |
| BstUI | CGCG | 1 cut(s) | 3270 |
| BstV2I | GAAGAC | 3 cut(s) | 2538, 3289, 3395 |
| BstX2I | RGATCY | 5 cut(s) | 920, 1757, 1952, 3215, 3255 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 160, 3212, 3227 |
| BstYI | RGATCY | 5 cut(s) | 920, 1757, 1952, 3215, 3255 |
| BstZI | CGGCCG | 1 cut(s) | 3945 |
| Bsu15I | ATCGAT | 2 cut(s) | 398, 3281 |
| BsuI | GTATCC | 2 cut(s) | 1161, 3716 |
| BsuTUI | ATCGAT | 2 cut(s) | 398, 3281 |
| BtgI | CCRYGG | 3 cut(s) | 120, 1002, 3205 |
| BtgZI | GCGATG | 2 cut(s) | 3009, 3064 |
| BtrI | CACGTC | 1 cut(s) | 3850 |
| BtsCI | GGATG | 6 cut(s) | 1012, 1601, 1823, 1900, 2149, 3847 |
| BtsI | GCAGTG | 6 cut(s) | 79, 912, 1391, 2885, 3636, 3887 |
| BveI | ACCTGC | 1 cut(s) | 2849 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1351 |
| CciI | TCATGA | 3 cut(s) | 390, 574, 3300 |
| CciNI | GCGGCCGC | 1 cut(s) | 3945 |
| CfoI | GCGC | 2 cut(s) | 1320, 1802 |
| Cfr10I | RCCGGY | 2 cut(s) | 1049, 2831 |
| Cfr13I | GGNCC | 8 cut(s) | 371, 1163, 1634, 2519, 2769, 2966, 3115, 3777 |
| ClaI | ATCGAT | 2 cut(s) | 398, 3281 |
| CseI | GACGC | 4 cut(s) | 1031, 1462, 1505, 3916 |
| Csp6I | GTAC | 7 cut(s) | 537, 740, 1136, 2180, 2212, 3338, 3933 |
| CspAI | ACCGGT | 2 cut(s) | 1049, 2831 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1200, 1235 |
| CviQI | GTAC | 7 cut(s) | 537, 740, 1136, 2180, 2212, 3338, 3933 |
| DinI | GGCGCC | 1 cut(s) | 1801 |
| DraIII | CACNNNGTG | 1 cut(s) | 1355 |
| EaeI | YGGCCR | 4 cut(s) | 660, 1577, 3202, 3945 |
| EagI | CGGCCG | 1 cut(s) | 3945 |
| Eam1104I | CTCTTC | 4 cut(s) | 608, 1131, 3303, 3888 |
| EarI | CTCTTC | 4 cut(s) | 608, 1131, 3303, 3888 |
| Ecl136II | GAGCTC | 2 cut(s) | 148, 3955 |
| EclXI | CGGCCG | 1 cut(s) | 3945 |
| Eco105I | TACGTA | 1 cut(s) | 3704 |
| Eco130I | CCWWGG | 4 cut(s) | 120, 1002, 2973, 3205 |
| Eco147I | AGGCCT | 1 cut(s) | 1110 |
| Eco24I | GRGCYC | 3 cut(s) | 150, 3196, 3957 |
| Eco31I | GGTCTC | 2 cut(s) | 13, 169 |
| Eco32I | GATATC | 3 cut(s) | 1013, 2569, 3747 |
| Eco47I | GGWCC | 3 cut(s) | 1163, 2519, 3115 |
| Eco52I | CGGCCG | 1 cut(s) | 3945 |
| Eco53kI | GAGCTC | 2 cut(s) | 148, 3955 |
| Eco57I | CTGAAG | 3 cut(s) | 251, 828, 2739 |
| Eco88I | CYCGRG | 7 cut(s) | 867, 1727, 2727, 3444, 3467, 3787, 3833 |
| EcoICRI | GAGCTC | 2 cut(s) | 148, 3955 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1163, 1634, 2519 |
| EcoRI | GAATTC | 1 cut(s) | 708 |
| EcoRV | GATATC | 3 cut(s) | 1013, 2569, 3747 |
| EcoT14I | CCWWGG | 4 cut(s) | 120, 1002, 2973, 3205 |
| EcoT22I | ATGCAT | 6 cut(s) | 508, 1196, 1601, 2116, 3333, 3558 |
| EcoT38I | GRGCYC | 3 cut(s) | 150, 3196, 3957 |
| EgeI | GGCGCC | 1 cut(s) | 1801 |
| EheI | GGCGCC | 1 cut(s) | 1801 |
| ErhI | CCWWGG | 4 cut(s) | 120, 1002, 2973, 3205 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2464, 2496 |
| FaqI | GGGAC | 5 cut(s) | 44, 1849, 2532, 2828, 3675 |
| FauI | CCCGC | 1 cut(s) | 3768 |
| FbaI | TGATCA | 1 cut(s) | 3519 |
| FblI | GTMKAC | 2 cut(s) | 289, 3846 |
| FokI | GGATG | 6 cut(s) | 1019, 1608, 1830, 1907, 2136, 3854 |
| FriOI | GRGCYC | 3 cut(s) | 150, 3196, 3957 |
| GlaI | GCGC | 2 cut(s) | 1319, 1801 |
| GsaI | CCCAGC | 3 cut(s) | 181, 301, 3917 |
| GsuI | CTGGAG | 6 cut(s) | 233, 1321, 1659, 2295, 2856, 3080 |
| HaeII | RGCGCY | 2 cut(s) | 1321, 1803 |
| HapII | CCGG | 5 cut(s) | 1050, 1871, 2681, 2777, 2832 |
| HgaI | GACGC | 4 cut(s) | 1031, 1462, 1505, 3916 |
| HhaI | GCGC | 2 cut(s) | 1320, 1802 |
| Hin1I | GRCGYC | 3 cut(s) | 1800, 3688, 3927 |
| Hin6I | GCGC | 2 cut(s) | 1318, 1800 |
| HinP1I | GCGC | 2 cut(s) | 1318, 1800 |
| HincII | GTYRAC | 5 cut(s) | 290, 1021, 1960, 3489, 3661 |
| HindII | GTYRAC | 5 cut(s) | 290, 1021, 1960, 3489, 3661 |
| HindIII | AAGCTT | 1 cut(s) | 1714 |
| HpaII | CCGG | 5 cut(s) | 1050, 1871, 2681, 2777, 2832 |
| HphI | GGTGA | 5 cut(s) | 1367, 2252, 3460, 3820, 3899 |
| Hpy99I | CGWCG | 3 cut(s) | 294, 3690, 3932 |
| HpyAV | CCTTC | 7 cut(s) | 211, 515, 1076, 2911, 3206, 3546, 3578 |
| HpyCH4IV | ACGT | 5 cut(s) | 189, 292, 3688, 3703, 3849 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 247, 1031, 1409, 1421, 2378, 2609, 2690, 3010, 3626 |
| HpySE526I | ACGT | 5 cut(s) | 189, 292, 3688, 3703, 3849 |
| Hsp92I | GRCGYC | 3 cut(s) | 1800, 3688, 3927 |
| HspAI | GCGC | 2 cut(s) | 1318, 1800 |
| KasI | GGCGCC | 1 cut(s) | 1799 |
| Ksp22I | TGATCA | 1 cut(s) | 3519 |
| LguI | GCTCTTC | 2 cut(s) | 1131, 3888 |
| LmnI | GCTCC | 7 cut(s) | 145, 618, 3054, 3191, 3566, 3641, 3941 |
| MaeII | ACGT | 5 cut(s) | 189, 292, 3688, 3703, 3849 |
| MaeIII | GTNAC | 8 cut(s) | 446, 944, 1444, 1608, 2722, 3316, 3796, 3866 |
| MbiI | CCGCTC | 1 cut(s) | 3944 |
| MfeI | CAATTG | 3 cut(s) | 494, 564, 3015 |
| MflI | RGATCY | 5 cut(s) | 920, 1757, 1952, 3215, 3255 |
| MlsI | TGGCCA | 3 cut(s) | 662, 1579, 3204 |
| MluI | ACGCGT | 1 cut(s) | 3268 |
| MluNI | TGGCCA | 3 cut(s) | 662, 1579, 3204 |
| Mly113I | GGCGCC | 1 cut(s) | 1800 |
| MlyI | GAGTC | 8 cut(s) | 1369, 1541, 2059, 2277, 2324, 2917, 3028, 3656 |
| MmeI | TCCRAC | 3 cut(s) | 132, 1924, 3169 |
| Mox20I | TGGCCA | 3 cut(s) | 662, 1579, 3204 |
| Mph1103I | ATGCAT | 6 cut(s) | 508, 1196, 1601, 2116, 3333, 3558 |
| MroXI | GAANNNNTTC | 3 cut(s) | 408, 2580, 2629 |
| MscI | TGGCCA | 3 cut(s) | 662, 1579, 3204 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1384, 3225 |
| Msp20I | TGGCCA | 3 cut(s) | 662, 1579, 3204 |
| MspA1I | CMGCKG | 3 cut(s) | 1400, 2990, 3950 |
| MspCI | CTTAAG | 2 cut(s) | 332, 2657 |
| MspI | CCGG | 5 cut(s) | 1050, 1871, 2681, 2777, 2832 |
| MunI | CAATTG | 3 cut(s) | 494, 564, 3015 |
| Mva1269I | GAATGC | 3 cut(s) | 2116, 3163, 3331 |
| MvnI | CGCG | 1 cut(s) | 3270 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 247, 1031, 1409, 1421, 2378, 2609, 2690, 3010, 3626 |
| NarI | GGCGCC | 1 cut(s) | 1800 |
| NcoI | CCATGG | 3 cut(s) | 120, 1002, 3205 |
| NmuCI | GTSAC | 3 cut(s) | 446, 944, 1444 |
| NotI | GCGGCCGC | 1 cut(s) | 3945 |
| NsiI | ATGCAT | 6 cut(s) | 508, 1196, 1601, 2116, 3333, 3558 |
| NspI | RCATGY | 7 cut(s) | 1198, 1492, 1516, 1624, 2010, 2376, 3354 |
| NspV | TTCGAA | 2 cut(s) | 806, 2108 |
| OliI | CACNNNNGTG | 1 cut(s) | 1384 |
| PaeI | GCATGC | 3 cut(s) | 1198, 1624, 3354 |
| PaeR7I | CTCGAG | 3 cut(s) | 867, 1727, 3833 |
| PagI | TCATGA | 3 cut(s) | 390, 574, 3300 |
| PaqCI | CACCTGC | 1 cut(s) | 2849 |
| PasI | CCCWGGG | 1 cut(s) | 452 |
| PceI | AGGCCT | 1 cut(s) | 1110 |
| PciSI | GCTCTTC | 2 cut(s) | 1131, 3888 |
| PctI | GAATGC | 3 cut(s) | 2116, 3163, 3331 |
| PdmI | GAANNNNTTC | 3 cut(s) | 408, 2580, 2629 |
| PfeI | GAWTC | 6 cut(s) | 404, 457, 772, 2785, 3107, 3761 |
| PflFI | GACNNNGTC | 1 cut(s) | 1472 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 201, 304, 3051 |
| PfoI | TCCNGGA | 3 cut(s) | 422, 2060, 2571 |
| PinAI | ACCGGT | 2 cut(s) | 1049, 2831 |
| PleI | GAGTC | 8 cut(s) | 1369, 1540, 2059, 2277, 2324, 2916, 3028, 3656 |
| PluTI | GGCGCC | 1 cut(s) | 1803 |
| PpsI | GAGTC | 8 cut(s) | 1369, 1540, 2059, 2277, 2324, 2916, 3028, 3656 |
| Ppu21I | YACGTR | 1 cut(s) | 3704 |
| PpuMI | RGGWCCY | 2 cut(s) | 1163, 2519 |
| PshBI | ATTAAT | 2 cut(s) | 1808, 2463 |
| PsiI | TTATAA | 1 cut(s) | 833 |
| Psp124BI | GAGCTC | 2 cut(s) | 150, 3957 |
| Psp5II | RGGWCCY | 2 cut(s) | 1163, 2519 |
| PspFI | CCCAGC | 3 cut(s) | 177, 297, 3913 |
| PspPI | GGNCC | 8 cut(s) | 371, 1163, 1634, 2519, 2769, 2966, 3115, 3777 |
| PspPPI | RGGWCCY | 2 cut(s) | 1163, 2519 |
| PspXI | VCTCGAGB | 1 cut(s) | 3833 |
| PstI | CTGCAG | 2 cut(s) | 823, 2860 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1351 |
| PsuI | RGATCY | 5 cut(s) | 920, 1757, 1952, 3215, 3255 |
| PsyI | GACNNNGTC | 1 cut(s) | 1472 |
| PvuII | CAGCTG | 1 cut(s) | 2990 |
| RsaI | GTAC | 7 cut(s) | 538, 741, 1137, 2181, 2213, 3339, 3934 |
| RsaNI | GTAC | 7 cut(s) | 537, 740, 1136, 2180, 2212, 3338, 3933 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1384, 3225 |
| SacI | GAGCTC | 2 cut(s) | 150, 3957 |
| SalI | GTCGAC | 1 cut(s) | 288 |
| SapI | GCTCTTC | 2 cut(s) | 1131, 3888 |
| Sau96I | GGNCC | 8 cut(s) | 371, 1163, 1634, 2519, 2769, 2966, 3115, 3777 |
| SchI | GAGTC | 8 cut(s) | 1369, 1541, 2059, 2277, 2324, 2917, 3028, 3656 |
| SfcI | CTRYAG | 4 cut(s) | 819, 1343, 2649, 2856 |
| SfoI | GGCGCC | 1 cut(s) | 1801 |
| Sfr274I | CTCGAG | 3 cut(s) | 867, 1727, 3833 |
| SfuI | TTCGAA | 2 cut(s) | 806, 2108 |
| SinI | GGWCC | 3 cut(s) | 1163, 2519, 3115 |
| SlaI | CTCGAG | 3 cut(s) | 867, 1727, 3833 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1384, 3225 |
| SmlI | CTYRAG | 7 cut(s) | 332, 867, 1727, 2159, 2657, 3172, 3833 |
| SmoI | CTYRAG | 7 cut(s) | 332, 867, 1727, 2159, 2657, 3172, 3833 |
| SnaBI | TACGTA | 1 cut(s) | 3704 |
| SpeI | ACTAGT | 1 cut(s) | 2743 |
| SphI | GCATGC | 3 cut(s) | 1198, 1624, 3354 |
| SseBI | AGGCCT | 1 cut(s) | 1110 |
| SsiI | CCGC | 9 cut(s) | 1321, 1382, 1398, 1566, 1797, 3606, 3775, 3944, 3948 |
| SspDI | GGCGCC | 1 cut(s) | 1799 |
| SstI | GAGCTC | 2 cut(s) | 150, 3957 |
| StuI | AGGCCT | 1 cut(s) | 1110 |
| StyI | CCWWGG | 4 cut(s) | 120, 1002, 2973, 3205 |
| TaiI | ACGT | 5 cut(s) | 192, 295, 3691, 3706, 3852 |
| TaqII | GACCGA | 1 cut(s) | 2949 |
| TatI | WGTACW | 2 cut(s) | 739, 1135 |
| TauI | GCSGC | 5 cut(s) | 1323, 1800, 3609, 3947, 3950 |
| TfiI | GAWTC | 6 cut(s) | 404, 457, 772, 2785, 3107, 3761 |
| TseFI | GTSAC | 3 cut(s) | 446, 944, 1444 |
| Tsp45I | GTSAC | 3 cut(s) | 446, 944, 1444 |
| TspGWI | ACGGA | 1 cut(s) | 1608 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1472 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 201, 304, 3051 |
| Vha464I | CTTAAG | 2 cut(s) | 332, 2657 |
| VneI | GTGCAC | 1 cut(s) | 3729 |
| VpaK11BI | GGWCC | 3 cut(s) | 1163, 2519, 3115 |
| VspI | ATTAAT | 2 cut(s) | 1808, 2463 |
| XapI | RAATTY | 6 cut(s) | 427, 680, 708, 802, 2230, 2817 |
| XbaI | TCTAGA | 1 cut(s) | 917 |
| XceI | RCATGY | 7 cut(s) | 1198, 1492, 1516, 1624, 2010, 2376, 3354 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1613 |
| XhoI | CTCGAG | 3 cut(s) | 867, 1727, 3833 |
| XmiI | GTMKAC | 2 cut(s) | 289, 3846 |
| XmnI | GAANNNNTTC | 3 cut(s) | 408, 2580, 2629 |
| ZraI | GACGTC | 1 cut(s) | 3689 |
| Zsp2I | ATGCAT | 6 cut(s) | 508, 1196, 1601, 2116, 3333, 3558 |