Mediator of RNA polymerase II transcription subunit 33A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23590 |
| fragaria_vesca | FvH4_4g14380 FvH4_4g14390 |
| malus_domestica | MD13G1182100.v1.1 MD13G1182200.v1.1 MD16G1182600.v1.1 |
| prunus_persica | Prupe.1G150000_v2.0.a1 Prupe.1G150000_v2.0.a1 Prupe.1G150100_v2.0.a1 |
| pyrus_communis | pycom13g15720 pycom16g15330 |
| rosa_chinensis | RchiOBHm_Chr4g0418521 RchiOBHm_Chr4g0418541 |
| rosa_laevigata | RLG00000007855 RLG00000007856 |
| rosa_multiflora | Rmu_sc0000363.1_g000040 Rmu_sc0001879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00361790 Rroxscaffold_5G00361800 |
| rosa_rugosa | Rorug04G0154000 Rorug04G0154100.1 |
| rosa_samantha | Rh4AG215600 Rh4AG215700 Rh4BG215000 Rh4BG215100 Rh4CG227200 Rh4CG227300 Rh4DG213900 Rh4DG214000 |
| rosa_wichuraiana | Rw4G018240 Rw4G018250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 382 |
| AccB1I | GGYRCC | 1 cut(s) | 382 |
| AccIII | TCCGGA | 1 cut(s) | 308 |
| AclWI | GGATC | 3 cut(s) | 300, 383, 601 |
| AfaI | GTAC | 4 cut(s) | 138, 283, 384, 396 |
| AjiI | CACGTC | 2 cut(s) | 38, 80 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 636, 668 |
| AluBI | AGCT | 1 cut(s) | 542 |
| AluI | AGCT | 1 cut(s) | 542 |
| Alw26I | GTCTC | 2 cut(s) | 22, 308 |
| AlwI | GGATC | 3 cut(s) | 300, 383, 601 |
| Aor13HI | TCCGGA | 1 cut(s) | 308 |
| AoxI | GGCC | 2 cut(s) | 166, 635 |
| ApeKI | GCWGC | 1 cut(s) | 542 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 69, 101, 146, 178 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 183 |
| Asp718I | GGTACC | 1 cut(s) | 382 |
| AsuHPI | GGTGA | 1 cut(s) | 530 |
| BaeGI | GKGCMC | 1 cut(s) | 451 |
| BanI | GGYRCC | 1 cut(s) | 382 |
| BauI | CACGAG | 1 cut(s) | 552 |
| BbsI | GAAGAC | 1 cut(s) | 40 |
| BbvI | GCAGC | 1 cut(s) | 529 |
| BccI | CCATC | 4 cut(s) | 188, 206, 414, 449 |
| BcoDI | GTCTC | 2 cut(s) | 22, 308 |
| BfaI | CTAG | 4 cut(s) | 452, 581, 609, 633 |
| BisI | GCNGC | 1 cut(s) | 543 |
| BlsI | GCNGC | 1 cut(s) | 544 |
| BmcAI | AGTACT | 1 cut(s) | 396 |
| BmgBI | CACGTC | 2 cut(s) | 38, 80 |
| BmiI | GGNNCC | 1 cut(s) | 384 |
| BmsI | GCATC | 2 cut(s) | 608, 613 |
| BpiI | GAAGAC | 1 cut(s) | 40 |
| BsaBI | GATNNNNATC | 1 cut(s) | 598 |
| BsaWI | WCCGGW | 1 cut(s) | 308 |
| Bse1I | ACTGG | 1 cut(s) | 392 |
| Bse8I | GATNNNNATC | 1 cut(s) | 598 |
| BseAI | TCCGGA | 1 cut(s) | 308 |
| BseJI | GATNNNNATC | 1 cut(s) | 598 |
| BseNI | ACTGG | 1 cut(s) | 392 |
| BseSI | GKGCMC | 1 cut(s) | 451 |
| BseXI | GCAGC | 1 cut(s) | 529 |
| BsgI | GTGCAG | 1 cut(s) | 490 |
| BshFI | GGCC | 2 cut(s) | 168, 637 |
| BshNI | GGYRCC | 1 cut(s) | 382 |
| BsiSI | CCGG | 1 cut(s) | 309 |
| BsmAI | GTCTC | 2 cut(s) | 22, 308 |
| BsmBI | CGTCTC | 1 cut(s) | 22 |
| BsnI | GGCC | 2 cut(s) | 168, 637 |
| Bsp1286I | GDGCHC | 1 cut(s) | 451 |
| Bsp13I | TCCGGA | 1 cut(s) | 308 |
| Bsp1407I | TGTACA | 1 cut(s) | 136 |
| Bsp143I | GATC | 4 cut(s) | 305, 388, 412, 593 |
| BspANI | GGCC | 2 cut(s) | 168, 637 |
| BspEI | TCCGGA | 1 cut(s) | 308 |
| BspLI | GGNNCC | 1 cut(s) | 384 |
| BspPI | GGATC | 3 cut(s) | 300, 383, 601 |
| BspQI | GCTCTTC | 1 cut(s) | 225 |
| BspT107I | GGYRCC | 1 cut(s) | 382 |
| BsrGI | TGTACA | 1 cut(s) | 136 |
| BsrI | ACTGG | 1 cut(s) | 392 |
| BssMI | GATC | 4 cut(s) | 305, 388, 412, 593 |
| BssSI | CACGAG | 1 cut(s) | 552 |
| Bst2BI | CACGAG | 1 cut(s) | 552 |
| Bst6I | CTCTTC | 1 cut(s) | 225 |
| BstAUI | TGTACA | 1 cut(s) | 136 |
| BstC8I | GCNNGC | 1 cut(s) | 483 |
| BstKTI | GATC | 4 cut(s) | 308, 391, 415, 596 |
| BstMAI | GTCTC | 2 cut(s) | 22, 308 |
| BstMBI | GATC | 4 cut(s) | 305, 388, 412, 593 |
| BstNSI | RCATGY | 1 cut(s) | 53 |
| BstSLI | GKGCMC | 1 cut(s) | 451 |
| BstV1I | GCAGC | 1 cut(s) | 529 |
| BstV2I | GAAGAC | 1 cut(s) | 40 |
| BsuRI | GGCC | 2 cut(s) | 168, 637 |
| BtrI | CACGTC | 2 cut(s) | 38, 80 |
| BtsI | GCAGTG | 1 cut(s) | 633 |
| BtsIMutI | CAGTG | 1 cut(s) | 633 |
| Cac8I | GCNNGC | 1 cut(s) | 483 |
| Csp6I | GTAC | 4 cut(s) | 137, 282, 383, 395 |
| CviAII | CATG | 2 cut(s) | 50, 269 |
| CviJI | RGCY | 5 cut(s) | 168, 496, 542, 637, 668 |
| CviKI_1 | RGCY | 5 cut(s) | 168, 496, 542, 637, 668 |
| CviQI | GTAC | 4 cut(s) | 137, 282, 383, 395 |
| DpnI | GATC | 4 cut(s) | 307, 390, 414, 595 |
| DpnII | GATC | 4 cut(s) | 305, 388, 412, 593 |
| Eam1104I | CTCTTC | 1 cut(s) | 225 |
| EarI | CTCTTC | 1 cut(s) | 225 |
| Esp3I | CGTCTC | 1 cut(s) | 22 |
| FaeI | CATG | 2 cut(s) | 53, 272 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 425, 457 |
| FatI | CATG | 2 cut(s) | 49, 268 |
| Fnu4HI | GCNGC | 1 cut(s) | 543 |
| Fsp4HI | GCNGC | 1 cut(s) | 543 |
| FspBI | CTAG | 4 cut(s) | 452, 581, 609, 633 |
| GluI | GCNGC | 1 cut(s) | 543 |
| HaeIII | GGCC | 2 cut(s) | 168, 637 |
| HapII | CCGG | 1 cut(s) | 309 |
| Hin1II | CATG | 2 cut(s) | 53, 272 |
| HinfI | GANTC | 2 cut(s) | 85, 605 |
| HpaII | CCGG | 1 cut(s) | 309 |
| HphI | GGTGA | 1 cut(s) | 530 |
| Hpy166II | GTNNAC | 3 cut(s) | 137, 139, 179 |
| Hpy188I | TCNGA | 1 cut(s) | 604 |
| Hpy188III | TCNNGA | 5 cut(s) | 101, 309, 554, 609, 620 |
| Hpy8I | GTNNAC | 3 cut(s) | 137, 139, 179 |
| HpyCH4IV | ACGT | 2 cut(s) | 37, 79 |
| HpyCH4V | TGCA | 5 cut(s) | 364, 485, 507, 562, 626 |
| HpySE526I | ACGT | 2 cut(s) | 37, 79 |
| Hsp92II | CATG | 2 cut(s) | 53, 272 |
| Kpn2I | TCCGGA | 1 cut(s) | 308 |
| KpnI | GGTACC | 1 cut(s) | 386 |
| Kzo9I | GATC | 4 cut(s) | 305, 388, 412, 593 |
| LguI | GCTCTTC | 1 cut(s) | 225 |
| LpnPI | CCDG | 5 cut(s) | 114, 142, 322, 399, 405 |
| Lsp1109I | GCAGC | 1 cut(s) | 529 |
| LweI | GCATC | 2 cut(s) | 608, 613 |
| MaeI | CTAG | 4 cut(s) | 452, 581, 609, 633 |
| MaeII | ACGT | 2 cut(s) | 37, 79 |
| MaeIII | GTNAC | 2 cut(s) | 122, 628 |
| MalI | GATC | 4 cut(s) | 307, 390, 414, 595 |
| MboI | GATC | 4 cut(s) | 305, 388, 412, 593 |
| MboII | GAAGA | 4 cut(s) | 45, 242, 286, 608 |
| MfeI | CAATTG | 1 cut(s) | 486 |
| MhlI | GDGCHC | 1 cut(s) | 451 |
| MluCI | AATT | 5 cut(s) | 22, 143, 277, 436, 486 |
| MlyI | GAGTC | 1 cut(s) | 599 |
| MnlI | CCTC | 3 cut(s) | 284, 372, 583 |
| MroI | TCCGGA | 1 cut(s) | 308 |
| MroXI | GAANNNNTTC | 1 cut(s) | 183 |
| MseI | TTAA | 4 cut(s) | 21, 146, 432, 647 |
| MslI | CAYNNNNRTG | 1 cut(s) | 470 |
| MspI | CCGG | 1 cut(s) | 309 |
| MunI | CAATTG | 1 cut(s) | 486 |
| NdeII | GATC | 4 cut(s) | 305, 388, 412, 593 |
| NlaIII | CATG | 2 cut(s) | 53, 272 |
| NlaIV | GGNNCC | 1 cut(s) | 384 |
| NmuCI | GTSAC | 2 cut(s) | 122, 628 |
| NspI | RCATGY | 1 cut(s) | 53 |
| PciSI | GCTCTTC | 1 cut(s) | 225 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 85 |
| PdmI | GAANNNNTTC | 1 cut(s) | 183 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PkrI | GCNGC | 1 cut(s) | 544 |
| PleI | GAGTC | 1 cut(s) | 599 |
| PpsI | GAGTC | 1 cut(s) | 599 |
| PspN4I | GGNNCC | 1 cut(s) | 384 |
| RsaI | GTAC | 4 cut(s) | 138, 283, 384, 396 |
| RsaNI | GTAC | 4 cut(s) | 137, 282, 383, 395 |
| RseI | CAYNNNNRTG | 1 cut(s) | 470 |
| SapI | GCTCTTC | 1 cut(s) | 225 |
| SaqAI | TTAA | 4 cut(s) | 21, 146, 432, 647 |
| SatI | GCNGC | 1 cut(s) | 543 |
| Sau3AI | GATC | 4 cut(s) | 305, 388, 412, 593 |
| ScaI | AGTACT | 1 cut(s) | 396 |
| SchI | GAGTC | 1 cut(s) | 599 |
| SduI | GDGCHC | 1 cut(s) | 451 |
| SetI | ASST | 9 cut(s) | 40, 82, 295, 329, 352, 370, 388, 544, 586 |
| SfaNI | GCATC | 2 cut(s) | 608, 613 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 470 |
| Sse9I | AATT | 5 cut(s) | 22, 143, 277, 436, 486 |
| SspMI | CTAG | 4 cut(s) | 452, 581, 609, 633 |
| TaiI | ACGT | 2 cut(s) | 40, 82 |
| TaqI | TCGA | 1 cut(s) | 304 |
| TasI | AATT | 5 cut(s) | 22, 143, 277, 436, 486 |
| TatI | WGTACW | 3 cut(s) | 136, 281, 394 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| Tru1I | TTAA | 4 cut(s) | 21, 146, 432, 647 |
| Tru9I | TTAA | 4 cut(s) | 21, 146, 432, 647 |
| TscAI | CASTG | 1 cut(s) | 633 |
| TseFI | GTSAC | 2 cut(s) | 122, 628 |
| TseI | GCWGC | 1 cut(s) | 542 |
| Tsp45I | GTSAC | 2 cut(s) | 122, 628 |
| TspDTI | ATGAA | 2 cut(s) | 57, 556 |
| TspRI | CASTG | 1 cut(s) | 633 |
| XbaI | TCTAGA | 1 cut(s) | 608 |
| XceI | RCATGY | 1 cut(s) | 53 |
| XmnI | GAANNNNTTC | 1 cut(s) | 183 |
| XspI | CTAG | 4 cut(s) | 452, 581, 609, 633 |
| ZrmI | AGTACT | 1 cut(s) | 396 |