Mediator of RNA polymerase II transcription subunit 33A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23590 |
| fragaria_vesca | FvH4_4g14380 FvH4_4g14390 |
| malus_domestica | MD13G1182100.v1.1 MD13G1182200.v1.1 MD16G1182600.v1.1 |
| prunus_persica | Prupe.1G150000_v2.0.a1 Prupe.1G150000_v2.0.a1 Prupe.1G150100_v2.0.a1 |
| pyrus_communis | pycom13g15720 pycom16g15330 |
| rosa_chinensis | RchiOBHm_Chr4g0418521 RchiOBHm_Chr4g0418541 |
| rosa_laevigata | RLG00000007855 RLG00000007856 |
| rosa_multiflora | Rmu_sc0000363.1_g000040 Rmu_sc0001879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00361790 Rroxscaffold_5G00361800 |
| rosa_rugosa | Rorug04G0154000 Rorug04G0154100.1 |
| rosa_samantha | Rh4AG215600 Rh4AG215700 Rh4BG215000 Rh4BG215100 Rh4CG227200 Rh4CG227300 Rh4DG213900 Rh4DG214000 |
| rosa_wichuraiana | Rw4G018240 Rw4G018250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2487 |
| AccB1I | GGYRCC | 1 cut(s) | 1315 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 262, 1838 |
| AccI | GTMKAC | 2 cut(s) | 407, 1149 |
| AccII | CGCG | 2 cut(s) | 850, 2281 |
| AccIII | TCCGGA | 1 cut(s) | 3107 |
| AciI | CCGC | 6 cut(s) | 1319, 1434, 2219, 2279, 2281, 3227 |
| AclWI | GGATC | 8 cut(s) | 215, 1128, 1417, 1836, 1849, 2861, 3285, 3298 |
| AcoI | YGGCCR | 2 cut(s) | 1229, 2845 |
| AcsI | RAATTY | 3 cut(s) | 454, 2428, 3329 |
| AcuI | CTGAAG | 3 cut(s) | 1200, 2382, 2487 |
| AcyI | GRCGYC | 1 cut(s) | 2484 |
| AfaI | GTAC | 9 cut(s) | 651, 961, 1275, 1479, 1701, 2006, 2377, 3345, 3459 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 262, 1838, 2793 |
| AflII | CTTAAG | 1 cut(s) | 2188 |
| AflIII | ACRYGT | 4 cut(s) | 19, 402, 2510, 3460 |
| AhlI | ACTAGT | 1 cut(s) | 1097 |
| AjiI | CACGTC | 1 cut(s) | 3463 |
| AjnI | CCWGG | 5 cut(s) | 1231, 2000, 2369, 2535, 3179 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2650, 2682 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2049, 2050, 2081, 2082 |
| Alw21I | GWGCWC | 2 cut(s) | 9, 2839 |
| Alw26I | GTCTC | 6 cut(s) | 10, 105, 672, 975, 1912, 2491 |
| AlwI | GGATC | 8 cut(s) | 215, 1128, 1417, 1836, 1849, 2861, 3285, 3298 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1733, 3133 |
| Ama87I | CYCGRG | 1 cut(s) | 2897 |
| Aor13HI | TCCGGA | 1 cut(s) | 3107 |
| AoxI | GGCC | 5 cut(s) | 1229, 2411, 2619, 2645, 2845 |
| ApoI | RAATTY | 3 cut(s) | 454, 2428, 3329 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1064, 1096 |
| AseI | ATTAAT | 4 cut(s) | 684, 741, 1304, 1667 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1388, 1863 |
| AspLEI | GCGC | 1 cut(s) | 852 |
| AspS9I | GGNCC | 1 cut(s) | 2412 |
| AsuC2I | CCSGG | 4 cut(s) | 1704, 2063, 2898, 2899 |
| AsuHPI | GGTGA | 2 cut(s) | 2063, 3503 |
| AsuII | TTCGAA | 1 cut(s) | 3138 |
| AsuNHI | GCTAGC | 2 cut(s) | 1436, 1933 |
| AvaI | CYCGRG | 1 cut(s) | 2897 |
| AxyI | CCTNAGG | 1 cut(s) | 492 |
| BaeGI | GKGCMC | 1 cut(s) | 1318 |
| BalI | TGGCCA | 2 cut(s) | 1231, 2847 |
| BamHI | GGATCC | 2 cut(s) | 1841, 3290 |
| BanI | GGYRCC | 1 cut(s) | 1315 |
| BanII | GRGCYC | 3 cut(s) | 9, 2301, 2839 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3132, 3164 |
| BbsI | GAAGAC | 5 cut(s) | 107, 2128, 2275, 2725, 3011 |
| Bbv12I | GWGCWC | 2 cut(s) | 9, 2839 |
| BccI | CCATC | 9 cut(s) | 234, 277, 322, 1531, 1976, 2633, 3160, 3412, 3499 |
| BciT130I | CCWGG | 5 cut(s) | 1233, 2002, 2371, 2537, 3181 |
| BciVI | GTATCC | 2 cut(s) | 3018, 3175 |
| BclI | TGATCA | 3 cut(s) | 342, 720, 3570 |
| BcnI | CCSGG | 4 cut(s) | 1704, 2063, 2898, 2899 |
| BcoDI | GTCTC | 6 cut(s) | 10, 105, 672, 975, 1912, 2491 |
| BcuI | ACTAGT | 1 cut(s) | 1097 |
| BfaI | CTAG | 9 cut(s) | 237, 1098, 1208, 1290, 1437, 1815, 1934, 2216, 3071 |
| BfmI | CTRYAG | 6 cut(s) | 503, 1146, 2145, 2155, 2559, 3561 |
| BfrI | CTTAAG | 1 cut(s) | 2188 |
| BfuI | GTATCC | 2 cut(s) | 3018, 3175 |
| BglII | AGATCT | 2 cut(s) | 35, 1599 |
| Bme1390I | CCNGG | 9 cut(s) | 1233, 1704, 2002, 2063, 2371, 2537, 2898, 2899, 3181 |
| BmeT110I | CYCGRG | 1 cut(s) | 2897 |
| BmgBI | CACGTC | 1 cut(s) | 3463 |
| BmgT120I | GGNCC | 1 cut(s) | 2412 |
| BmrFI | CCNGG | 9 cut(s) | 1233, 1704, 2002, 2063, 2371, 2537, 2898, 2899, 3181 |
| BmrI | ACTGGG | 1 cut(s) | 424 |
| BmtI | GCTAGC | 2 cut(s) | 1440, 1937 |
| BmuI | ACTGGG | 1 cut(s) | 424 |
| BpiI | GAAGAC | 5 cut(s) | 107, 2128, 2275, 2725, 3011 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1443, 1475 |
| BpmI | CTGGAG | 2 cut(s) | 2064, 3163 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1711, 2868, 3115 |
| Bpu14I | TTCGAA | 1 cut(s) | 3138 |
| BpuEI | CTTGAG | 3 cut(s) | 1400, 2473, 3186 |
| BpuMI | CCSGG | 4 cut(s) | 1704, 2063, 2898, 2899 |
| Bsa29I | ATCGAT | 1 cut(s) | 822 |
| BsaAI | YACGTR | 1 cut(s) | 557 |
| BsaHI | GRCGYC | 1 cut(s) | 2484 |
| BsaWI | WCCGGW | 1 cut(s) | 3107 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3246, 3276 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 262, 1838, 2793 |
| Bse1I | ACTGG | 6 cut(s) | 123, 419, 615, 657, 1659, 2292 |
| Bse21I | CCTNAGG | 1 cut(s) | 492 |
| Bse3DI | GCAATG | 3 cut(s) | 1083, 1343, 2528 |
| BseAI | TCCGGA | 1 cut(s) | 3107 |
| BseBI | CCWGG | 5 cut(s) | 1233, 2002, 2371, 2537, 3181 |
| BseCI | ATCGAT | 1 cut(s) | 822 |
| BseGI | GGATG | 6 cut(s) | 986, 1253, 1440, 2642, 3104, 3460 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 262, 1838, 2793 |
| BseMI | GCAATG | 3 cut(s) | 1083, 1343, 2528 |
| BseMII | CTCAG | 9 cut(s) | 46, 53, 116, 483, 1170, 1474, 1608, 1725, 2882 |
| BseNI | ACTGG | 6 cut(s) | 123, 419, 615, 657, 1659, 2292 |
| BseSI | GKGCMC | 1 cut(s) | 1318 |
| BseYI | CCCAGC | 4 cut(s) | 131, 2760, 3487, 3526 |
| BsgI | GTGCAG | 2 cut(s) | 1944, 3146 |
| Bsh1236I | CGCG | 2 cut(s) | 850, 2281 |
| BshFI | GGCC | 5 cut(s) | 1231, 2413, 2621, 2647, 2847 |
| BshNI | GGYRCC | 1 cut(s) | 1315 |
| BshVI | ATCGAT | 1 cut(s) | 822 |
| BsiHKAI | GWGCWC | 2 cut(s) | 9, 2839 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2897 |
| BsiSI | CCGG | 4 cut(s) | 1704, 2063, 2898, 3108 |
| BslFI | GGGAC | 2 cut(s) | 148, 1108 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 262, 1838, 2793 |
| BsmAI | GTCTC | 6 cut(s) | 10, 105, 672, 975, 1912, 2491 |
| BsmBI | CGTCTC | 1 cut(s) | 2491 |
| BsmFI | GGGAC | 2 cut(s) | 148, 1108 |
| BsmI | GAATGC | 2 cut(s) | 2800, 3584 |
| BsnI | GGCC | 5 cut(s) | 1231, 2413, 2621, 2647, 2847 |
| BsoBI | CYCGRG | 1 cut(s) | 2897 |
| Bsp119I | TTCGAA | 1 cut(s) | 3138 |
| Bsp1286I | GDGCHC | 4 cut(s) | 9, 1318, 2301, 2839 |
| Bsp13I | TCCGGA | 1 cut(s) | 3107 |
| Bsp1407I | TGTACA | 2 cut(s) | 1477, 3457 |
| Bsp19I | CCATGG | 3 cut(s) | 607, 2053, 2848 |
| BspACI | CCGC | 6 cut(s) | 1319, 1434, 2219, 2279, 2281, 3227 |
| BspANI | GGCC | 5 cut(s) | 1231, 2413, 2621, 2647, 2847 |
| BspCNI | CTCAG | 9 cut(s) | 45, 52, 115, 484, 1169, 1473, 1607, 1724, 2881 |
| BspDI | ATCGAT | 1 cut(s) | 822 |
| BspEI | TCCGGA | 1 cut(s) | 3107 |
| BspFNI | CGCG | 2 cut(s) | 850, 2281 |
| BspMAI | CTGCAG | 1 cut(s) | 507 |
| BspOI | GCTAGC | 2 cut(s) | 1440, 1937 |
| BspPI | GGATC | 8 cut(s) | 215, 1128, 1417, 1836, 1849, 2861, 3285, 3298 |
| BspQI | GCTCTTC | 1 cut(s) | 2844 |
| BspT104I | TTCGAA | 1 cut(s) | 3138 |
| BspT107I | GGYRCC | 1 cut(s) | 1315 |
| BspTI | CTTAAG | 1 cut(s) | 2188 |
| BsrDI | GCAATG | 3 cut(s) | 1083, 1343, 2528 |
| BsrGI | TGTACA | 2 cut(s) | 1477, 3457 |
| BsrI | ACTGG | 6 cut(s) | 123, 419, 615, 657, 1659, 2292 |
| BssNI | GRCGYC | 1 cut(s) | 2484 |
| BssT1I | CCWWGG | 5 cut(s) | 607, 1338, 1911, 2053, 2848 |
| Bst2UI | CCWGG | 5 cut(s) | 1233, 2002, 2371, 2537, 3181 |
| Bst6I | CTCTTC | 2 cut(s) | 2844, 3135 |
| BstACI | GRCGYC | 1 cut(s) | 2484 |
| BstAFI | CTTAAG | 1 cut(s) | 2188 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1943, 2864, 3361 |
| BstAUI | TGTACA | 2 cut(s) | 1477, 3457 |
| BstBAI | YACGTR | 1 cut(s) | 557 |
| BstBI | TTCGAA | 1 cut(s) | 3138 |
| BstDSI | CCRYGG | 5 cut(s) | 607, 2053, 2279, 2642, 2848 |
| BstF5I | GGATG | 6 cut(s) | 986, 1253, 1440, 2642, 3104, 3460 |
| BstFNI | CGCG | 2 cut(s) | 850, 2281 |
| BstHHI | GCGC | 1 cut(s) | 852 |
| BstMAI | GTCTC | 6 cut(s) | 10, 105, 672, 975, 1912, 2491 |
| BstNI | CCWGG | 5 cut(s) | 1233, 2002, 2371, 2537, 3181 |
| BstSCI | CCNGG | 9 cut(s) | 1231, 1702, 2000, 2061, 2369, 2535, 2896, 2897, 3179 |
| BstSFI | CTRYAG | 6 cut(s) | 503, 1146, 2145, 2155, 2559, 3561 |
| BstSLI | GKGCMC | 1 cut(s) | 1318 |
| BstUI | CGCG | 2 cut(s) | 850, 2281 |
| BstV2I | GAAGAC | 5 cut(s) | 107, 2128, 2275, 2725, 3011 |
| BstX2I | RGATCY | 4 cut(s) | 35, 1599, 1841, 3290 |
| BstYI | RGATCY | 4 cut(s) | 35, 1599, 1841, 3290 |
| Bsu15I | ATCGAT | 1 cut(s) | 822 |
| Bsu36I | CCTNAGG | 1 cut(s) | 492 |
| BsuI | GTATCC | 2 cut(s) | 3018, 3175 |
| BsuRI | GGCC | 5 cut(s) | 1231, 2413, 2621, 2647, 2847 |
| BsuTUI | ATCGAT | 1 cut(s) | 822 |
| BtgI | CCRYGG | 5 cut(s) | 607, 2053, 2279, 2642, 2848 |
| BtgZI | GCGATG | 1 cut(s) | 2611 |
| BtrI | CACGTC | 1 cut(s) | 3463 |
| BtsCI | GGATG | 6 cut(s) | 986, 1253, 1440, 2642, 3104, 3460 |
| BtsI | GCAGTG | 4 cut(s) | 1488, 1574, 2522, 2781 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1733, 3133 |
| CfoI | GCGC | 1 cut(s) | 852 |
| Cfr13I | GGNCC | 1 cut(s) | 2412 |
| Cfr42I | CCGCGG | 1 cut(s) | 2282 |
| Cfr9I | CCCGGG | 1 cut(s) | 2897 |
| ClaI | ATCGAT | 1 cut(s) | 822 |
| CseI | GACGC | 2 cut(s) | 1157, 3287 |
| Csp6I | GTAC | 9 cut(s) | 650, 960, 1274, 1478, 1700, 2005, 2376, 3344, 3458 |
| CviQI | GTAC | 9 cut(s) | 650, 960, 1274, 1478, 1700, 2005, 2376, 3344, 3458 |
| EaeI | YGGCCR | 2 cut(s) | 1229, 2845 |
| Eam1104I | CTCTTC | 2 cut(s) | 2844, 3135 |
| EarI | CTCTTC | 2 cut(s) | 2844, 3135 |
| Ecl136II | GAGCTC | 2 cut(s) | 7, 2837 |
| Eco130I | CCWWGG | 5 cut(s) | 607, 1338, 1911, 2053, 2848 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 2301, 2839 |
| Eco32I | GATATC | 1 cut(s) | 1428 |
| Eco53kI | GAGCTC | 2 cut(s) | 7, 2837 |
| Eco57I | CTGAAG | 3 cut(s) | 1200, 2382, 2487 |
| Eco81I | CCTNAGG | 1 cut(s) | 492 |
| Eco88I | CYCGRG | 1 cut(s) | 2897 |
| EcoICRI | GAGCTC | 2 cut(s) | 7, 2837 |
| EcoRII | CCWGG | 5 cut(s) | 1231, 2000, 2369, 2535, 3179 |
| EcoRV | GATATC | 1 cut(s) | 1428 |
| EcoT14I | CCWWGG | 5 cut(s) | 607, 1338, 1911, 2053, 2848 |
| EcoT22I | ATGCAT | 5 cut(s) | 187, 1253, 2023, 2027, 2916 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 2301, 2839 |
| ErhI | CCWWGG | 5 cut(s) | 607, 1338, 1911, 2053, 2848 |
| Esp3I | CGTCTC | 1 cut(s) | 2491 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2113, 2145 |
| FaqI | GGGAC | 2 cut(s) | 148, 1108 |
| FauNDI | CATATG | 1 cut(s) | 629 |
| FbaI | TGATCA | 3 cut(s) | 342, 720, 3570 |
| FblI | GTMKAC | 2 cut(s) | 407, 1149 |
| FokI | GGATG | 6 cut(s) | 973, 1260, 1427, 2649, 3091, 3467 |
| FriOI | GRGCYC | 3 cut(s) | 9, 2301, 2839 |
| FspBI | CTAG | 9 cut(s) | 237, 1098, 1208, 1290, 1437, 1815, 1934, 2216, 3071 |
| GlaI | GCGC | 1 cut(s) | 851 |
| GsaI | CCCAGC | 4 cut(s) | 135, 2764, 3491, 3530 |
| GsuI | CTGGAG | 2 cut(s) | 2064, 3163 |
| HaeIII | GGCC | 5 cut(s) | 1231, 2413, 2621, 2647, 2847 |
| HapII | CCGG | 4 cut(s) | 1704, 2063, 2898, 3108 |
| HgaI | GACGC | 2 cut(s) | 1157, 3287 |
| HhaI | GCGC | 1 cut(s) | 852 |
| Hin1I | GRCGYC | 1 cut(s) | 2484 |
| Hin6I | GCGC | 1 cut(s) | 850 |
| HinP1I | GCGC | 1 cut(s) | 850 |
| HincII | GTYRAC | 4 cut(s) | 369, 1105, 1405, 2482 |
| HindII | GTYRAC | 4 cut(s) | 369, 1105, 1405, 2482 |
| HindIII | AAGCTT | 3 cut(s) | 1366, 1948, 3412 |
| HpaII | CCGG | 4 cut(s) | 1704, 2063, 2898, 3108 |
| HphI | GGTGA | 2 cut(s) | 2063, 3503 |
| Hpy99I | CGWCG | 2 cut(s) | 3303, 3306 |
| HpyAV | CCTTC | 8 cut(s) | 1275, 1287, 1874, 2104, 2108, 2583, 2616, 3182 |
| HpyCH4IV | ACGT | 5 cut(s) | 556, 1272, 2484, 2937, 3462 |
| HpySE526I | ACGT | 5 cut(s) | 556, 1272, 2484, 2937, 3462 |
| Hsp92I | GRCGYC | 1 cut(s) | 2484 |
| HspAI | GCGC | 1 cut(s) | 850 |
| Kpn2I | TCCGGA | 1 cut(s) | 3107 |
| Ksp22I | TGATCA | 3 cut(s) | 342, 720, 3570 |
| KspI | CCGCGG | 1 cut(s) | 2282 |
| LguI | GCTCTTC | 1 cut(s) | 2844 |
| MaeI | CTAG | 9 cut(s) | 237, 1098, 1208, 1290, 1437, 1815, 1934, 2216, 3071 |
| MaeII | ACGT | 5 cut(s) | 556, 1272, 2484, 2937, 3462 |
| MaeIII | GTNAC | 3 cut(s) | 481, 2365, 3129 |
| MfeI | CAATTG | 2 cut(s) | 2460, 2658 |
| MflI | RGATCY | 4 cut(s) | 35, 1599, 1841, 3290 |
| MhlI | GDGCHC | 4 cut(s) | 9, 1318, 2301, 2839 |
| MlsI | TGGCCA | 2 cut(s) | 1231, 2847 |
| MluNI | TGGCCA | 2 cut(s) | 1231, 2847 |
| MlyI | GAGTC | 2 cut(s) | 2265, 3269 |
| MmeI | TCCRAC | 5 cut(s) | 577, 1451, 1819, 2675, 3426 |
| Mox20I | TGGCCA | 2 cut(s) | 1231, 2847 |
| Mph1103I | ATGCAT | 5 cut(s) | 187, 1253, 2023, 2027, 2916 |
| MroI | TCCGGA | 1 cut(s) | 3107 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1388, 1863 |
| MscI | TGGCCA | 2 cut(s) | 1231, 2847 |
| MslI | CAYNNNNRTG | 4 cut(s) | 857, 2079, 3247, 3283 |
| Msp20I | TGGCCA | 2 cut(s) | 1231, 2847 |
| MspA1I | CMGCKG | 4 cut(s) | 442, 508, 2281, 2360 |
| MspCI | CTTAAG | 1 cut(s) | 2188 |
| MspI | CCGG | 4 cut(s) | 1704, 2063, 2898, 3108 |
| MspR9I | CCNGG | 9 cut(s) | 1233, 1704, 2002, 2063, 2371, 2537, 2898, 2899, 3181 |
| MunI | CAATTG | 2 cut(s) | 2460, 2658 |
| Mva1269I | GAATGC | 2 cut(s) | 2800, 3584 |
| MvaI | CCWGG | 5 cut(s) | 1233, 2002, 2371, 2537, 3181 |
| MvnI | CGCG | 2 cut(s) | 850, 2281 |
| NciI | CCSGG | 4 cut(s) | 1704, 2063, 2898, 2899 |
| NcoI | CCATGG | 3 cut(s) | 607, 2053, 2848 |
| NdeI | CATATG | 1 cut(s) | 629 |
| NheI | GCTAGC | 2 cut(s) | 1436, 1933 |
| NmeAIII | GCCGAG | 1 cut(s) | 952 |
| NmuCI | GTSAC | 1 cut(s) | 3129 |
| NsiI | ATGCAT | 5 cut(s) | 187, 1253, 2023, 2027, 2916 |
| NspV | TTCGAA | 1 cut(s) | 3138 |
| PaeI | GCATGC | 4 cut(s) | 1662, 2025, 2259, 3433 |
| PciI | ACATGT | 3 cut(s) | 19, 402, 2510 |
| PciSI | GCTCTTC | 1 cut(s) | 2844 |
| PctI | GAATGC | 2 cut(s) | 2800, 3584 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1388, 1863 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 262, 1838 |
| PleI | GAGTC | 2 cut(s) | 2265, 3269 |
| PpsI | GAGTC | 2 cut(s) | 2265, 3269 |
| Ppu21I | YACGTR | 1 cut(s) | 557 |
| PscI | ACATGT | 3 cut(s) | 19, 402, 2510 |
| PshBI | ATTAAT | 4 cut(s) | 684, 741, 1304, 1667 |
| Psp124BI | GAGCTC | 2 cut(s) | 9, 2839 |
| Psp6I | CCWGG | 5 cut(s) | 1231, 2000, 2369, 2535, 3179 |
| PspFI | CCCAGC | 4 cut(s) | 131, 2760, 3487, 3526 |
| PspGI | CCWGG | 5 cut(s) | 1231, 2000, 2369, 2535, 3179 |
| PspPI | GGNCC | 1 cut(s) | 2412 |
| PstI | CTGCAG | 1 cut(s) | 507 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1733, 3133 |
| PsuI | RGATCY | 4 cut(s) | 35, 1599, 1841, 3290 |
| PvuII | CAGCTG | 3 cut(s) | 442, 508, 2360 |
| RsaI | GTAC | 9 cut(s) | 651, 961, 1275, 1479, 1701, 2006, 2377, 3345, 3459 |
| RsaNI | GTAC | 9 cut(s) | 650, 960, 1274, 1478, 1700, 2005, 2376, 3344, 3458 |
| RseI | CAYNNNNRTG | 4 cut(s) | 857, 2079, 3247, 3283 |
| SacI | GAGCTC | 2 cut(s) | 9, 2839 |
| SacII | CCGCGG | 1 cut(s) | 2282 |
| SapI | GCTCTTC | 1 cut(s) | 2844 |
| Sau96I | GGNCC | 1 cut(s) | 2412 |
| SchI | GAGTC | 2 cut(s) | 2265, 3269 |
| ScrFI | CCNGG | 9 cut(s) | 1233, 1704, 2002, 2063, 2371, 2537, 2898, 2899, 3181 |
| SduI | GDGCHC | 4 cut(s) | 9, 1318, 2301, 2839 |
| SfcI | CTRYAG | 6 cut(s) | 503, 1146, 2145, 2155, 2559, 3561 |
| Sfr303I | CCGCGG | 1 cut(s) | 2282 |
| SfuI | TTCGAA | 1 cut(s) | 3138 |
| SgrBI | CCGCGG | 1 cut(s) | 2282 |
| SmaI | CCCGGG | 1 cut(s) | 2899 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 857, 2079, 3247, 3283 |
| SmlI | CTYRAG | 4 cut(s) | 1379, 2188, 2488, 3201 |
| SmoI | CTYRAG | 4 cut(s) | 1379, 2188, 2488, 3201 |
| SpeI | ACTAGT | 1 cut(s) | 1097 |
| SphI | GCATGC | 4 cut(s) | 1662, 2025, 2259, 3433 |
| SsiI | CCGC | 6 cut(s) | 1319, 1434, 2219, 2279, 2281, 3227 |
| SspMI | CTAG | 9 cut(s) | 237, 1098, 1208, 1290, 1437, 1815, 1934, 2216, 3071 |
| SstI | GAGCTC | 2 cut(s) | 9, 2839 |
| StyD4I | CCNGG | 9 cut(s) | 1231, 1702, 2000, 2061, 2369, 2535, 2896, 2897, 3179 |
| StyI | CCWWGG | 5 cut(s) | 607, 1338, 1911, 2053, 2848 |
| TaiI | ACGT | 5 cut(s) | 559, 1275, 2487, 2940, 3465 |
| TaqI | TCGA | 7 cut(s) | 822, 1392, 2033, 2598, 3138, 3304, 3576 |
| TatI | WGTACW | 3 cut(s) | 1477, 3343, 3457 |
| TauI | GCSGC | 2 cut(s) | 1436, 2222 |
| TseFI | GTSAC | 1 cut(s) | 3129 |
| Tsp45I | GTSAC | 1 cut(s) | 3129 |
| TspGWI | ACGGA | 1 cut(s) | 1422 |
| TspMI | CCCGGG | 1 cut(s) | 2897 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 262, 1838 |
| Vha464I | CTTAAG | 1 cut(s) | 2188 |
| VspI | ATTAAT | 4 cut(s) | 684, 741, 1304, 1667 |
| XapI | RAATTY | 3 cut(s) | 454, 2428, 3329 |
| XbaI | TCTAGA | 1 cut(s) | 236 |
| XmaI | CCCGGG | 1 cut(s) | 2897 |
| XmiI | GTMKAC | 2 cut(s) | 407, 1149 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1388, 1863 |
| XspI | CTAG | 9 cut(s) | 237, 1098, 1208, 1290, 1437, 1815, 1934, 2216, 3071 |
| ZraI | GACGTC | 1 cut(s) | 2485 |
| Zsp2I | ATGCAT | 5 cut(s) | 187, 1253, 2023, 2027, 2916 |