Mediator of RNA polymerase II transcription subunit 33A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23590 |
| fragaria_vesca | FvH4_4g14380 FvH4_4g14390 |
| malus_domestica | MD13G1182100.v1.1 MD13G1182200.v1.1 MD16G1182600.v1.1 |
| prunus_persica | Prupe.1G150000_v2.0.a1 Prupe.1G150000_v2.0.a1 Prupe.1G150100_v2.0.a1 |
| pyrus_communis | pycom13g15720 pycom16g15330 |
| rosa_chinensis | RchiOBHm_Chr4g0418521 RchiOBHm_Chr4g0418541 |
| rosa_laevigata | RLG00000007855 RLG00000007856 |
| rosa_multiflora | Rmu_sc0000363.1_g000040 Rmu_sc0001879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00361790 Rroxscaffold_5G00361800 |
| rosa_rugosa | Rorug04G0154000 Rorug04G0154100.1 |
| rosa_samantha | Rh4AG215600 Rh4AG215700 Rh4BG215000 Rh4BG215100 Rh4CG227200 Rh4CG227300 Rh4DG213900 Rh4DG214000 |
| rosa_wichuraiana | Rw4G018240 Rw4G018250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3068 |
| Acc65I | GGTACC | 1 cut(s) | 3707 |
| AccB1I | GGYRCC | 2 cut(s) | 238, 3707 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 201, 304, 3054 |
| AccII | CGCG | 1 cut(s) | 2643 |
| AciI | CCGC | 4 cut(s) | 1324, 1800, 2781, 3947 |
| AclWI | GGATC | 5 cut(s) | 71, 928, 1768, 3213, 3226 |
| AcoI | YGGCCR | 3 cut(s) | 660, 1580, 3205 |
| AcsI | RAATTY | 4 cut(s) | 708, 802, 810, 3719 |
| AcuI | CTGAAG | 3 cut(s) | 374, 828, 2742 |
| AcyI | GRCGYC | 3 cut(s) | 1805, 3476, 3691 |
| AfaI | GTAC | 9 cut(s) | 15, 538, 1140, 2184, 3278, 3358, 3709, 3849, 3937 |
| AflII | CTTAAG | 1 cut(s) | 332 |
| AflIII | ACRYGT | 2 cut(s) | 3786, 3850 |
| AgeI | ACCGGT | 1 cut(s) | 3279 |
| AhlI | ACTAGT | 1 cut(s) | 1681 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2497, 2529 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 946, 978 |
| Alw21I | GWGCWC | 4 cut(s) | 2263, 2623, 3199, 3736 |
| Alw26I | GTCTC | 8 cut(s) | 169, 331, 363, 1342, 1872, 2278, 3450, 3856 |
| Alw44I | GTGCAC | 1 cut(s) | 3732 |
| AlwI | GGATC | 5 cut(s) | 71, 928, 1768, 3213, 3226 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 27, 1354, 2321 |
| Ama87I | CYCGRG | 5 cut(s) | 867, 1730, 2730, 3175, 3447 |
| ApaI | GGGCCC | 1 cut(s) | 1169 |
| ApaLI | GTGCAC | 1 cut(s) | 3732 |
| ApoI | RAATTY | 4 cut(s) | 708, 802, 810, 3719 |
| AsiGI | ACCGGT | 1 cut(s) | 3279 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1739, 2583, 3315 |
| Asp718I | GGTACC | 1 cut(s) | 3707 |
| AspLEI | GCGC | 2 cut(s) | 294, 1323 |
| AsuC2I | CCSGG | 2 cut(s) | 1314, 3255 |
| AsuHPI | GGTGA | 5 cut(s) | 1370, 1910, 2255, 3119, 3463 |
| AvaI | CYCGRG | 5 cut(s) | 867, 1730, 2730, 3175, 3447 |
| AvaII | GGWCC | 4 cut(s) | 371, 1153, 1996, 2522 |
| AxyI | CCTNAGG | 1 cut(s) | 573 |
| BaeGI | GKGCMC | 4 cut(s) | 195, 243, 1169, 3736 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2198, 2231, 3260, 3293 |
| BalI | TGGCCA | 3 cut(s) | 662, 1582, 3207 |
| BamHI | GGATCC | 1 cut(s) | 3218 |
| BanI | GGYRCC | 2 cut(s) | 238, 3707 |
| BanII | GRGCYC | 1 cut(s) | 1169 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2500, 2532, 3831, 3863 |
| BbsI | GAAGAC | 2 cut(s) | 2541, 3292 |
| Bbv12I | GWGCWC | 4 cut(s) | 2263, 2623, 3199, 3736 |
| BccI | CCATC | 5 cut(s) | 1004, 1815, 2429, 3048, 3734 |
| BceAI | ACGGC | 1 cut(s) | 3704 |
| BclI | TGATCA | 1 cut(s) | 3522 |
| BcnI | CCSGG | 2 cut(s) | 1314, 3255 |
| BcoDI | GTCTC | 8 cut(s) | 169, 331, 363, 1342, 1872, 2278, 3450, 3856 |
| BcuI | ACTAGT | 1 cut(s) | 1681 |
| BfmI | CTRYAG | 4 cut(s) | 833, 1346, 2652, 3098 |
| BfoI | RGCGCY | 2 cut(s) | 295, 1324 |
| BfrI | CTTAAG | 1 cut(s) | 332 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1412 |
| BlpI | GCTNAGC | 1 cut(s) | 1720 |
| Bme18I | GGWCC | 4 cut(s) | 371, 1153, 1996, 2522 |
| BmeT110I | CYCGRG | 5 cut(s) | 867, 1730, 2730, 3175, 3447 |
| BmrI | ACTGGG | 2 cut(s) | 1163, 2769 |
| BmuI | ACTGGG | 2 cut(s) | 1163, 2769 |
| BpiI | GAAGAC | 2 cut(s) | 2541, 3292 |
| BpmI | CTGGAG | 4 cut(s) | 1324, 2298, 2844, 2859 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1720 |
| BpuEI | CTTGAG | 2 cut(s) | 1617, 2183 |
| BpuMI | CCSGG | 2 cut(s) | 1314, 3255 |
| Bsa29I | ATCGAT | 1 cut(s) | 398 |
| BsaAI | YACGTR | 2 cut(s) | 3272, 3787 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1014, 3217 |
| BsaHI | GRCGYC | 3 cut(s) | 1805, 3476, 3691 |
| BsaI | GGTCTC | 1 cut(s) | 169 |
| BsaWI | WCCGGW | 2 cut(s) | 1873, 3279 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1660, 1690 |
| Bse118I | RCCGGY | 3 cut(s) | 301, 2560, 3279 |
| Bse1I | ACTGG | 9 cut(s) | 1057, 1169, 1224, 1563, 1609, 2479, 2747, 2775, 2839 |
| Bse21I | CCTNAGG | 1 cut(s) | 573 |
| Bse3DI | GCAATG | 5 cut(s) | 1434, 2888, 3187, 3447, 3877 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1014, 3217 |
| BseCI | ATCGAT | 1 cut(s) | 398 |
| BseGI | GGATG | 6 cut(s) | 1015, 1826, 2152, 2195, 3026, 3850 |
| BseJI | GATNNNNATC | 2 cut(s) | 1014, 3217 |
| BseMI | GCAATG | 5 cut(s) | 1434, 2888, 3187, 3447, 3877 |
| BseMII | CTCAG | 7 cut(s) | 153, 374, 587, 1400, 2202, 2971, 3558 |
| BseNI | ACTGG | 9 cut(s) | 1057, 1169, 1224, 1563, 1609, 2479, 2747, 2775, 2839 |
| BseRI | GAGGAG | 9 cut(s) | 20, 1256, 1259, 1860, 2148, 2296, 2628, 3908, 3911 |
| BseSI | GKGCMC | 4 cut(s) | 195, 243, 1169, 3736 |
| BseYI | CCCAGC | 2 cut(s) | 297, 1354 |
| BsgI | GTGCAG | 1 cut(s) | 723 |
| Bsh1236I | CGCG | 1 cut(s) | 2643 |
| BshNI | GGYRCC | 2 cut(s) | 238, 3707 |
| BshTI | ACCGGT | 1 cut(s) | 3279 |
| BshVI | ATCGAT | 1 cut(s) | 398 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2263, 2623, 3199, 3736 |
| BsiHKCI | CYCGRG | 5 cut(s) | 867, 1730, 2730, 3175, 3447 |
| BsiSI | CCGG | 6 cut(s) | 302, 1313, 1874, 2561, 3254, 3280 |
| BslFI | GGGAC | 7 cut(s) | 44, 194, 1166, 1982, 2045, 2763, 2831 |
| BsmAI | GTCTC | 8 cut(s) | 169, 331, 363, 1342, 1872, 2278, 3450, 3856 |
| BsmFI | GGGAC | 7 cut(s) | 44, 194, 1166, 1982, 2045, 2763, 2831 |
| BsmI | GAATGC | 3 cut(s) | 878, 3166, 3334 |
| Bso31I | GGTCTC | 1 cut(s) | 169 |
| BsoBI | CYCGRG | 5 cut(s) | 867, 1730, 2730, 3175, 3447 |
| Bsp120I | GGGCCC | 1 cut(s) | 1165 |
| Bsp1286I | GDGCHC | 7 cut(s) | 195, 243, 1169, 2263, 2623, 3199, 3736 |
| Bsp1407I | TGTACA | 2 cut(s) | 1138, 3847 |
| Bsp143I | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1720 |
| Bsp19I | CCATGG | 4 cut(s) | 949, 1005, 3002, 3208 |
| Bsp68I | TCGCGA | 1 cut(s) | 2643 |
| BspACI | CCGC | 4 cut(s) | 1324, 1800, 2781, 3947 |
| BspCNI | CTCAG | 7 cut(s) | 152, 373, 586, 1399, 2203, 2970, 3559 |
| BspDI | ATCGAT | 1 cut(s) | 398 |
| BspFNI | CGCG | 1 cut(s) | 2643 |
| BspHI | TCATGA | 1 cut(s) | 3303 |
| BspPI | GGATC | 5 cut(s) | 71, 928, 1768, 3213, 3226 |
| BspQI | GCTCTTC | 2 cut(s) | 834, 1134 |
| BspT107I | GGYRCC | 2 cut(s) | 238, 3707 |
| BspTI | CTTAAG | 1 cut(s) | 332 |
| BspTNI | GGTCTC | 1 cut(s) | 169 |
| BsrDI | GCAATG | 5 cut(s) | 1434, 2888, 3187, 3447, 3877 |
| BsrFI | RCCGGY | 3 cut(s) | 301, 2560, 3279 |
| BsrGI | TGTACA | 2 cut(s) | 1138, 3847 |
| BsrI | ACTGG | 9 cut(s) | 1057, 1169, 1224, 1563, 1609, 2479, 2747, 2775, 2839 |
| BssAI | RCCGGY | 3 cut(s) | 301, 2560, 3279 |
| BssMI | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| BssNI | GRCGYC | 3 cut(s) | 1805, 3476, 3691 |
| BssT1I | CCWWGG | 6 cut(s) | 949, 1005, 2976, 3002, 3208, 3469 |
| Bst4CI | ACNGT | 9 cut(s) | 35, 99, 536, 655, 771, 837, 2191, 2296, 3091 |
| Bst6I | CTCTTC | 5 cut(s) | 608, 834, 1134, 3306, 3854 |
| BstACI | GRCGYC | 3 cut(s) | 1805, 3476, 3691 |
| BstAFI | CTTAAG | 1 cut(s) | 332 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3359, 3629 |
| BstAUI | TGTACA | 2 cut(s) | 1138, 3847 |
| BstBAI | YACGTR | 2 cut(s) | 3272, 3787 |
| BstDSI | CCRYGG | 4 cut(s) | 949, 1005, 3002, 3208 |
| BstF5I | GGATG | 6 cut(s) | 1015, 1826, 2152, 2195, 3026, 3850 |
| BstFNI | CGCG | 1 cut(s) | 2643 |
| BstH2I | RGCGCY | 2 cut(s) | 295, 1324 |
| BstHHI | GCGC | 2 cut(s) | 294, 1323 |
| BstKTI | GATC | 9 cut(s) | 79, 923, 988, 1234, 1763, 2272, 2814, 3221, 3525 |
| BstMAI | GTCTC | 8 cut(s) | 169, 331, 363, 1342, 1872, 2278, 3450, 3856 |
| BstMBI | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| BstNSI | RCATGY | 6 cut(s) | 1201, 1495, 2013, 2379, 3357, 3854 |
| BstSFI | CTRYAG | 4 cut(s) | 833, 1346, 2652, 3098 |
| BstSLI | GKGCMC | 4 cut(s) | 195, 243, 1169, 3736 |
| BstSNI | TACGTA | 1 cut(s) | 3272 |
| BstUI | CGCG | 1 cut(s) | 2643 |
| BstV2I | GAAGAC | 2 cut(s) | 2541, 3292 |
| BstX2I | RGATCY | 2 cut(s) | 920, 3218 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 160, 3215, 3230 |
| BstYI | RGATCY | 2 cut(s) | 920, 3218 |
| Bsu15I | ATCGAT | 1 cut(s) | 398 |
| Bsu36I | CCTNAGG | 1 cut(s) | 573 |
| BsuTUI | ATCGAT | 1 cut(s) | 398 |
| BtgI | CCRYGG | 4 cut(s) | 949, 1005, 3002, 3208 |
| BtgZI | GCGATG | 1 cut(s) | 3067 |
| BtsCI | GGATG | 6 cut(s) | 1015, 1826, 2152, 2195, 3026, 3850 |
| BtsI | GCAGTG | 1 cut(s) | 3890 |
| BtsIMutI | CAGTG | 5 cut(s) | 40, 1176, 1217, 2292, 3890 |
| BtuMI | TCGCGA | 1 cut(s) | 2643 |
| CaiI | CAGNNNCTG | 3 cut(s) | 27, 1354, 2321 |
| CciI | TCATGA | 1 cut(s) | 3303 |
| CfoI | GCGC | 2 cut(s) | 294, 1323 |
| Cfr10I | RCCGGY | 3 cut(s) | 301, 2560, 3279 |
| ClaI | ATCGAT | 1 cut(s) | 398 |
| CseI | GACGC | 5 cut(s) | 1034, 1508, 1794, 3465, 3680 |
| Csp6I | GTAC | 9 cut(s) | 14, 537, 1139, 2183, 3277, 3357, 3708, 3848, 3936 |
| CspAI | ACCGGT | 1 cut(s) | 3279 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1203, 1238 |
| CviQI | GTAC | 9 cut(s) | 14, 537, 1139, 2183, 3277, 3357, 3708, 3848, 3936 |
| DpnI | GATC | 9 cut(s) | 78, 922, 987, 1233, 1762, 2271, 2813, 3220, 3524 |
| DpnII | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3068 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3068 |
| EaeI | YGGCCR | 3 cut(s) | 660, 1580, 3205 |
| Eam1104I | CTCTTC | 5 cut(s) | 608, 834, 1134, 3306, 3854 |
| EarI | CTCTTC | 5 cut(s) | 608, 834, 1134, 3306, 3854 |
| Eco105I | TACGTA | 1 cut(s) | 3272 |
| Eco130I | CCWWGG | 6 cut(s) | 949, 1005, 2976, 3002, 3208, 3469 |
| Eco147I | AGGCCT | 2 cut(s) | 1538, 3156 |
| Eco24I | GRGCYC | 1 cut(s) | 1169 |
| Eco31I | GGTCTC | 1 cut(s) | 169 |
| Eco32I | GATATC | 4 cut(s) | 1016, 1779, 2572, 3750 |
| Eco47I | GGWCC | 4 cut(s) | 371, 1153, 1996, 2522 |
| Eco57I | CTGAAG | 3 cut(s) | 374, 828, 2742 |
| Eco81I | CCTNAGG | 1 cut(s) | 573 |
| Eco88I | CYCGRG | 5 cut(s) | 867, 1730, 2730, 3175, 3447 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1153, 1165 |
| EcoRI | GAATTC | 1 cut(s) | 708 |
| EcoRV | GATATC | 4 cut(s) | 1016, 1779, 2572, 3750 |
| EcoT14I | CCWWGG | 6 cut(s) | 949, 1005, 2976, 3002, 3208, 3469 |
| EcoT22I | ATGCAT | 5 cut(s) | 508, 1199, 2119, 3336, 3561 |
| EcoT38I | GRGCYC | 1 cut(s) | 1169 |
| ErhI | CCWWGG | 6 cut(s) | 949, 1005, 2976, 3002, 3208, 3469 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1696, 1728, 2221, 2253, 2467, 2499, 3303, 3335 |
| FaqI | GGGAC | 7 cut(s) | 44, 194, 1166, 1982, 2045, 2763, 2831 |
| FauI | CCCGC | 2 cut(s) | 1793, 2788 |
| FbaI | TGATCA | 1 cut(s) | 3522 |
| FokI | GGATG | 6 cut(s) | 1022, 1833, 2139, 2182, 3013, 3857 |
| FriOI | GRGCYC | 1 cut(s) | 1169 |
| GlaI | GCGC | 2 cut(s) | 293, 1322 |
| GsaI | CCCAGC | 2 cut(s) | 301, 1358 |
| GsuI | CTGGAG | 4 cut(s) | 1324, 2298, 2844, 2859 |
| HaeII | RGCGCY | 2 cut(s) | 295, 1324 |
| HapII | CCGG | 6 cut(s) | 302, 1313, 1874, 2561, 3254, 3280 |
| HgaI | GACGC | 5 cut(s) | 1034, 1508, 1794, 3465, 3680 |
| HhaI | GCGC | 2 cut(s) | 294, 1323 |
| Hin1I | GRCGYC | 3 cut(s) | 1805, 3476, 3691 |
| Hin6I | GCGC | 2 cut(s) | 292, 1321 |
| HinP1I | GCGC | 2 cut(s) | 292, 1321 |
| HincII | GTYRAC | 6 cut(s) | 840, 1024, 1963, 2935, 3492, 3664 |
| HindII | GTYRAC | 6 cut(s) | 840, 1024, 1963, 2935, 3492, 3664 |
| HindIII | AAGCTT | 1 cut(s) | 1717 |
| HpaI | GTTAAC | 1 cut(s) | 3492 |
| HpaII | CCGG | 6 cut(s) | 302, 1313, 1874, 2561, 3254, 3280 |
| HphI | GGTGA | 5 cut(s) | 1370, 1910, 2255, 3119, 3463 |
| Hpy99I | CGWCG | 1 cut(s) | 2080 |
| HpyAV | CCTTC | 5 cut(s) | 211, 515, 3549, 3572, 3581 |
| HpyCH4III | ACNGT | 9 cut(s) | 35, 99, 536, 655, 771, 837, 2191, 2296, 3091 |
| HpyCH4IV | ACGT | 5 cut(s) | 189, 1600, 1935, 3271, 3786 |
| HpySE526I | ACGT | 5 cut(s) | 189, 1600, 1935, 3271, 3786 |
| Hsp92I | GRCGYC | 3 cut(s) | 1805, 3476, 3691 |
| HspAI | GCGC | 2 cut(s) | 292, 1321 |
| KflI | GGGWCCC | 1 cut(s) | 1153 |
| KpnI | GGTACC | 1 cut(s) | 3711 |
| Ksp22I | TGATCA | 1 cut(s) | 3522 |
| KspAI | GTTAAC | 1 cut(s) | 3492 |
| Kzo9I | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| LguI | GCTCTTC | 2 cut(s) | 834, 1134 |
| LmnI | GCTCC | 7 cut(s) | 43, 299, 2863, 3057, 3194, 3644, 3898 |
| MaeII | ACGT | 5 cut(s) | 189, 1600, 1935, 3271, 3786 |
| MaeIII | GTNAC | 8 cut(s) | 446, 697, 851, 1611, 1806, 1898, 2725, 3799 |
| MalI | GATC | 9 cut(s) | 78, 922, 987, 1233, 1762, 2271, 2813, 3220, 3524 |
| MboI | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| MfeI | CAATTG | 5 cut(s) | 483, 494, 564, 1288, 3018 |
| MflI | RGATCY | 2 cut(s) | 920, 3218 |
| MhlI | GDGCHC | 7 cut(s) | 195, 243, 1169, 2263, 2623, 3199, 3736 |
| MlsI | TGGCCA | 3 cut(s) | 662, 1582, 3207 |
| MluNI | TGGCCA | 3 cut(s) | 662, 1582, 3207 |
| MlyI | GAGTC | 7 cut(s) | 17, 1372, 2062, 2280, 2327, 3031, 3659 |
| MmeI | TCCRAC | 2 cut(s) | 1927, 3172 |
| Mox20I | TGGCCA | 3 cut(s) | 662, 1582, 3207 |
| Mph1103I | ATGCAT | 5 cut(s) | 508, 1199, 2119, 3336, 3561 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1739, 2583, 3315 |
| MscI | TGGCCA | 3 cut(s) | 662, 1582, 3207 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1481, 3228, 3826 |
| Msp20I | TGGCCA | 3 cut(s) | 662, 1582, 3207 |
| MspA1I | CMGCKG | 2 cut(s) | 2783, 2993 |
| MspCI | CTTAAG | 1 cut(s) | 332 |
| MspI | CCGG | 6 cut(s) | 302, 1313, 1874, 2561, 3254, 3280 |
| MunI | CAATTG | 5 cut(s) | 483, 494, 564, 1288, 3018 |
| Mva1269I | GAATGC | 3 cut(s) | 878, 3166, 3334 |
| MvnI | CGCG | 1 cut(s) | 2643 |
| NciI | CCSGG | 2 cut(s) | 1314, 3255 |
| NcoI | CCATGG | 4 cut(s) | 949, 1005, 3002, 3208 |
| NdeII | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| NmuCI | GTSAC | 4 cut(s) | 446, 851, 1806, 1898 |
| NruI | TCGCGA | 1 cut(s) | 2643 |
| NsiI | ATGCAT | 5 cut(s) | 508, 1199, 2119, 3336, 3561 |
| NspI | RCATGY | 6 cut(s) | 1201, 1495, 2013, 2379, 3357, 3854 |
| PaeI | GCATGC | 1 cut(s) | 1201 |
| PaeR7I | CTCGAG | 3 cut(s) | 867, 1730, 3175 |
| PagI | TCATGA | 1 cut(s) | 3303 |
| PasI | CCCWGGG | 1 cut(s) | 452 |
| PceI | AGGCCT | 2 cut(s) | 1538, 3156 |
| PciI | ACATGT | 1 cut(s) | 3850 |
| PciSI | GCTCTTC | 2 cut(s) | 834, 1134 |
| PctI | GAATGC | 3 cut(s) | 878, 3166, 3334 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1739, 2583, 3315 |
| PfeI | GAWTC | 8 cut(s) | 404, 457, 644, 1435, 2788, 3110, 3316, 3764 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 201, 304, 3054 |
| PfoI | TCCNGGA | 2 cut(s) | 422, 1312 |
| PinAI | ACCGGT | 1 cut(s) | 3279 |
| PleI | GAGTC | 7 cut(s) | 16, 1372, 2062, 2280, 2327, 3031, 3659 |
| PpsI | GAGTC | 7 cut(s) | 16, 1372, 2062, 2280, 2327, 3031, 3659 |
| Ppu21I | YACGTR | 2 cut(s) | 3272, 3787 |
| PpuMI | RGGWCCY | 1 cut(s) | 1153 |
| PscI | ACATGT | 1 cut(s) | 3850 |
| Psp5II | RGGWCCY | 1 cut(s) | 1153 |
| PspFI | CCCAGC | 2 cut(s) | 297, 1354 |
| PspOMI | GGGCCC | 1 cut(s) | 1165 |
| PspPPI | RGGWCCY | 1 cut(s) | 1153 |
| PstNI | CAGNNNCTG | 3 cut(s) | 27, 1354, 2321 |
| PsuI | RGATCY | 2 cut(s) | 920, 3218 |
| PvuII | CAGCTG | 1 cut(s) | 2993 |
| RruI | TCGCGA | 1 cut(s) | 2643 |
| RsaI | GTAC | 9 cut(s) | 15, 538, 1140, 2184, 3278, 3358, 3709, 3849, 3937 |
| RsaNI | GTAC | 9 cut(s) | 14, 537, 1139, 2183, 3277, 3357, 3708, 3848, 3936 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1481, 3228, 3826 |
| SapI | GCTCTTC | 2 cut(s) | 834, 1134 |
| Sau3AI | GATC | 9 cut(s) | 76, 920, 985, 1231, 1760, 2269, 2811, 3218, 3522 |
| SchI | GAGTC | 7 cut(s) | 17, 1372, 2062, 2280, 2327, 3031, 3659 |
| SduI | GDGCHC | 7 cut(s) | 195, 243, 1169, 2263, 2623, 3199, 3736 |
| SfcI | CTRYAG | 4 cut(s) | 833, 1346, 2652, 3098 |
| Sfr274I | CTCGAG | 3 cut(s) | 867, 1730, 3175 |
| SinI | GGWCC | 4 cut(s) | 371, 1153, 1996, 2522 |
| SlaI | CTCGAG | 3 cut(s) | 867, 1730, 3175 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1481, 3228, 3826 |
| SmlI | CTYRAG | 6 cut(s) | 332, 867, 1632, 1730, 2162, 3175 |
| SmoI | CTYRAG | 6 cut(s) | 332, 867, 1632, 1730, 2162, 3175 |
| SnaBI | TACGTA | 1 cut(s) | 3272 |
| SpeI | ACTAGT | 1 cut(s) | 1681 |
| SphI | GCATGC | 1 cut(s) | 1201 |
| SseBI | AGGCCT | 2 cut(s) | 1538, 3156 |
| SsiI | CCGC | 4 cut(s) | 1324, 1800, 2781, 3947 |
| StuI | AGGCCT | 2 cut(s) | 1538, 3156 |
| StyI | CCWWGG | 6 cut(s) | 949, 1005, 2976, 3002, 3208, 3469 |
| TaaI | ACNGT | 9 cut(s) | 35, 99, 536, 655, 771, 837, 2191, 2296, 3091 |
| TaiI | ACGT | 5 cut(s) | 192, 1603, 1938, 3274, 3789 |
| TaqI | TCGA | 6 cut(s) | 398, 868, 1731, 1743, 2272, 3176 |
| TatI | WGTACW | 3 cut(s) | 1138, 3356, 3847 |
| TauI | GCSGC | 2 cut(s) | 1326, 3950 |
| TfiI | GAWTC | 8 cut(s) | 404, 457, 644, 1435, 2788, 3110, 3316, 3764 |
| TscAI | CASTG | 5 cut(s) | 40, 1176, 1224, 2299, 3890 |
| TseFI | GTSAC | 4 cut(s) | 446, 851, 1806, 1898 |
| Tsp45I | GTSAC | 4 cut(s) | 446, 851, 1806, 1898 |
| TspGWI | ACGGA | 2 cut(s) | 1273, 3323 |
| TspRI | CASTG | 5 cut(s) | 40, 1176, 1224, 2299, 3890 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 201, 304, 3054 |
| Vha464I | CTTAAG | 1 cut(s) | 332 |
| VneI | GTGCAC | 1 cut(s) | 3732 |
| VpaK11BI | GGWCC | 4 cut(s) | 371, 1153, 1996, 2522 |
| XapI | RAATTY | 4 cut(s) | 708, 802, 810, 3719 |
| XbaI | TCTAGA | 1 cut(s) | 211 |
| XceI | RCATGY | 6 cut(s) | 1201, 1495, 2013, 2379, 3357, 3854 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1616, 2432, 3230 |
| XhoI | CTCGAG | 3 cut(s) | 867, 1730, 3175 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1739, 2583, 3315 |
| Zsp2I | ATGCAT | 5 cut(s) | 508, 1199, 2119, 3336, 3561 |