Mediator of RNA polymerase II transcription subunit 33A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23590 |
| fragaria_vesca | FvH4_4g14380 FvH4_4g14390 |
| malus_domestica | MD13G1182100.v1.1 MD13G1182200.v1.1 MD16G1182600.v1.1 |
| prunus_persica | Prupe.1G150000_v2.0.a1 Prupe.1G150000_v2.0.a1 Prupe.1G150100_v2.0.a1 |
| pyrus_communis | pycom13g15720 pycom16g15330 |
| rosa_chinensis | RchiOBHm_Chr4g0418521 RchiOBHm_Chr4g0418541 |
| rosa_laevigata | RLG00000007855 RLG00000007856 |
| rosa_multiflora | Rmu_sc0000363.1_g000040 Rmu_sc0001879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00361790 Rroxscaffold_5G00361800 |
| rosa_rugosa | Rorug04G0154000 Rorug04G0154100.1 |
| rosa_samantha | Rh4AG215600 Rh4AG215700 Rh4BG215000 Rh4BG215100 Rh4CG227200 Rh4CG227300 Rh4DG213900 Rh4DG214000 |
| rosa_wichuraiana | Rw4G018240 Rw4G018250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 683, 2174 |
| AatII | GACGTC | 2 cut(s) | 2565, 3042 |
| Acc36I | ACCTGC | 1 cut(s) | 2729 |
| AccB1I | GGYRCC | 1 cut(s) | 238 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 201, 583, 1913 |
| AccI | GTMKAC | 3 cut(s) | 228, 289, 1179 |
| AccII | CGCG | 1 cut(s) | 1105 |
| AccIII | TCCGGA | 1 cut(s) | 3224 |
| AciI | CCGC | 3 cut(s) | 2359, 3105, 3366 |
| AcoI | YGGCCR | 1 cut(s) | 2950 |
| AcsI | RAATTY | 2 cut(s) | 2506, 3443 |
| AcuI | CTGAAG | 3 cut(s) | 1632, 2460, 2562 |
| AcyI | GRCGYC | 2 cut(s) | 2562, 3039 |
| AdeI | CACNNNGTG | 1 cut(s) | 2311 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 201, 583, 1913, 2365 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 432 |
| AhlI | ACTAGT | 3 cut(s) | 443, 740, 1364 |
| AjnI | CCWGG | 6 cut(s) | 272, 2075, 2447, 2640, 2747, 2998 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2755, 2787 |
| AleI | CACNNNNGTG | 2 cut(s) | 2928, 2979 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 1278, 1310, 2124, 2125, 2156, 2157 |
| Alw21I | GWGCWC | 5 cut(s) | 119, 150, 330, 1455, 1891 |
| Alw26I | GTCTC | 9 cut(s) | 106, 169, 331, 1258, 1596, 1805, 2569, 2737, 3611 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 27, 1316 |
| Ama87I | CYCGRG | 1 cut(s) | 1454 |
| Aor13HI | TCCGGA | 1 cut(s) | 3224 |
| AoxI | GGCC | 7 cut(s) | 219, 371, 2489, 2724, 2750, 2899, 2950 |
| ApoI | RAATTY | 2 cut(s) | 2506, 3443 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1181, 1213, 2582, 2586, 2614, 2618 |
| AseI | ATTAAT | 2 cut(s) | 939, 1742 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1938 |
| AspLEI | GCGC | 1 cut(s) | 1107 |
| AspS9I | GGNCC | 1 cut(s) | 2490 |
| AsuHPI | GGTGA | 4 cut(s) | 1074, 2138, 3303, 3547 |
| AsuII | TTCGAA | 1 cut(s) | 3255 |
| AvaI | CYCGRG | 1 cut(s) | 1454 |
| AxyI | CCTNAGG | 2 cut(s) | 747, 1986 |
| BaeGI | GKGCMC | 2 cut(s) | 195, 243 |
| BalI | TGGCCA | 1 cut(s) | 2952 |
| BamHI | GGATCC | 3 cut(s) | 1916, 3404, 3431 |
| BanI | GGYRCC | 1 cut(s) | 238 |
| BanII | GRGCYC | 7 cut(s) | 119, 150, 330, 1455, 1891, 2379, 2944 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3249, 3281 |
| BauI | CACGAG | 1 cut(s) | 1136 |
| BbsI | GAAGAC | 5 cut(s) | 428, 2203, 2353, 2830, 3034 |
| Bbv12I | GWGCWC | 5 cut(s) | 119, 150, 330, 1455, 1891 |
| BciT130I | CCWGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| BciVI | GTATCC | 1 cut(s) | 3135 |
| BclI | TGATCA | 2 cut(s) | 975, 3286 |
| BcoDI | GTCTC | 9 cut(s) | 106, 169, 331, 1258, 1596, 1805, 2569, 2737, 3611 |
| BcuI | ACTAGT | 3 cut(s) | 443, 740, 1364 |
| BfaI | CTAG | 6 cut(s) | 444, 558, 741, 908, 1365, 1730 |
| BfmI | CTRYAG | 7 cut(s) | 303, 758, 1192, 1308, 1317, 2664, 3675 |
| BfuAI | ACCTGC | 1 cut(s) | 2729 |
| BfuI | GTATCC | 1 cut(s) | 3135 |
| BglII | AGATCT | 1 cut(s) | 356 |
| Bme1390I | CCNGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 432 |
| BmeT110I | CYCGRG | 1 cut(s) | 1454 |
| BmgT120I | GGNCC | 1 cut(s) | 2490 |
| BmrFI | CCNGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| BmrI | ACTGGG | 2 cut(s) | 679, 1773 |
| BmuI | ACTGGG | 2 cut(s) | 679, 1773 |
| BoxI | GACNNNNGTC | 1 cut(s) | 461 |
| BpiI | GAAGAC | 5 cut(s) | 428, 2203, 2353, 2830, 3034 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1518, 1550 |
| BpmI | CTGGAG | 4 cut(s) | 1240, 1995, 2139, 3280 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1786, 3232 |
| Bpu14I | TTCGAA | 1 cut(s) | 3255 |
| BpuEI | CTTGAG | 3 cut(s) | 45, 1524, 2551 |
| Bsa29I | ATCGAT | 1 cut(s) | 1077 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1475, 2011 |
| BsaHI | GRCGYC | 2 cut(s) | 2562, 3039 |
| BsaI | GGTCTC | 1 cut(s) | 169 |
| BsaWI | WCCGGW | 1 cut(s) | 3224 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3360, 3390 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 201, 583, 1913, 2365 |
| Bse1I | ACTGG | 6 cut(s) | 674, 874, 1146, 1779, 3165, 3297 |
| Bse21I | CCTNAGG | 2 cut(s) | 747, 1986 |
| Bse3DI | GCAATG | 2 cut(s) | 1350, 2633 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1475, 2011 |
| BseAI | TCCGGA | 1 cut(s) | 3224 |
| BseBI | CCWGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| BseCI | ATCGAT | 1 cut(s) | 1077 |
| BseGI | GGATG | 5 cut(s) | 269, 1515, 3221, 3356, 3574 |
| BseJI | GATNNNNATC | 2 cut(s) | 1475, 2011 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 201, 583, 1913, 2365 |
| BseMI | GCAATG | 2 cut(s) | 1350, 2633 |
| BseMII | CTCAG | 6 cut(s) | 367, 374, 738, 1800, 1977, 2748 |
| BseNI | ACTGG | 6 cut(s) | 674, 874, 1146, 1779, 3165, 3297 |
| BseRI | GAGGAG | 1 cut(s) | 1584 |
| BseSI | GKGCMC | 2 cut(s) | 195, 243 |
| BseYI | CCCAGC | 3 cut(s) | 452, 1270, 3640 |
| BsgI | GTGCAG | 4 cut(s) | 2019, 2697, 3263, 3690 |
| Bsh1236I | CGCG | 1 cut(s) | 1105 |
| BshFI | GGCC | 7 cut(s) | 221, 373, 2491, 2726, 2752, 2901, 2952 |
| BshNI | GGYRCC | 1 cut(s) | 238 |
| BshVI | ATCGAT | 1 cut(s) | 1077 |
| BsiHKAI | GWGCWC | 5 cut(s) | 119, 150, 330, 1455, 1891 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1454 |
| BsiSI | CCGG | 1 cut(s) | 3225 |
| BslFI | GGGAC | 6 cut(s) | 115, 406, 469, 1222, 1375, 3162 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 201, 583, 1913, 2365 |
| BsmAI | GTCTC | 9 cut(s) | 106, 169, 331, 1258, 1596, 1805, 2569, 2737, 3611 |
| BsmBI | CGTCTC | 3 cut(s) | 2569, 2737, 3611 |
| BsmFI | GGGAC | 6 cut(s) | 115, 406, 469, 1222, 1375, 3162 |
| BsmI | GAATGC | 4 cut(s) | 2807, 2905, 3128, 3698 |
| BsnI | GGCC | 7 cut(s) | 221, 373, 2491, 2726, 2752, 2901, 2952 |
| Bso31I | GGTCTC | 1 cut(s) | 169 |
| BsoBI | CYCGRG | 1 cut(s) | 1454 |
| Bsp119I | TTCGAA | 1 cut(s) | 3255 |
| Bsp1286I | GDGCHC | 9 cut(s) | 119, 150, 195, 243, 330, 1455, 1891, 2379, 2944 |
| Bsp13I | TCCGGA | 1 cut(s) | 3224 |
| Bsp1407I | TGTACA | 1 cut(s) | 1552 |
| Bsp19I | CCATGG | 3 cut(s) | 222, 862, 2953 |
| BspACI | CCGC | 3 cut(s) | 2359, 3105, 3366 |
| BspANI | GGCC | 7 cut(s) | 221, 373, 2491, 2726, 2752, 2901, 2952 |
| BspCNI | CTCAG | 6 cut(s) | 366, 373, 739, 1799, 1978, 2747 |
| BspDI | ATCGAT | 1 cut(s) | 1077 |
| BspEI | TCCGGA | 1 cut(s) | 3224 |
| BspFNI | CGCG | 1 cut(s) | 1105 |
| BspHI | TCATGA | 1 cut(s) | 1096 |
| BspMAI | CTGCAG | 4 cut(s) | 307, 762, 1312, 1321 |
| BspMI | ACCTGC | 1 cut(s) | 2729 |
| BspQI | GCTCTTC | 1 cut(s) | 2307 |
| BspT104I | TTCGAA | 1 cut(s) | 3255 |
| BspT107I | GGYRCC | 1 cut(s) | 238 |
| BspTNI | GGTCTC | 1 cut(s) | 169 |
| BsrDI | GCAATG | 2 cut(s) | 1350, 2633 |
| BsrGI | TGTACA | 1 cut(s) | 1552 |
| BsrI | ACTGG | 6 cut(s) | 674, 874, 1146, 1779, 3165, 3297 |
| BssNAI | GTATAC | 1 cut(s) | 229 |
| BssNI | GRCGYC | 2 cut(s) | 2562, 3039 |
| BssSI | CACGAG | 1 cut(s) | 1136 |
| BssT1I | CCWWGG | 5 cut(s) | 51, 222, 862, 2953, 3427 |
| Bst1107I | GTATAC | 1 cut(s) | 229 |
| Bst2BI | CACGAG | 1 cut(s) | 1136 |
| Bst2UI | CCWGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| Bst6I | CTCTTC | 3 cut(s) | 2307, 3131, 3252 |
| BstACI | GRCGYC | 2 cut(s) | 2562, 3039 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1316, 3353 |
| BstAUI | TGTACA | 1 cut(s) | 1552 |
| BstBI | TTCGAA | 1 cut(s) | 3255 |
| BstDEI | CTNAG | 9 cut(s) | 353, 360, 747, 1786, 1986, 2266, 2734, 2873, 3232 |
| BstDSI | CCRYGG | 4 cut(s) | 222, 862, 2128, 2953 |
| BstF5I | GGATG | 5 cut(s) | 269, 1515, 3221, 3356, 3574 |
| BstFNI | CGCG | 1 cut(s) | 1105 |
| BstHHI | GCGC | 1 cut(s) | 1107 |
| BstMAI | GTCTC | 9 cut(s) | 106, 169, 331, 1258, 1596, 1805, 2569, 2737, 3611 |
| BstNI | CCWGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 461 |
| BstSCI | CCNGG | 6 cut(s) | 272, 2075, 2447, 2640, 2747, 2998 |
| BstSFI | CTRYAG | 7 cut(s) | 303, 758, 1192, 1308, 1317, 2664, 3675 |
| BstSLI | GKGCMC | 2 cut(s) | 195, 243 |
| BstUI | CGCG | 1 cut(s) | 1105 |
| BstV2I | GAAGAC | 5 cut(s) | 428, 2203, 2353, 2830, 3034 |
| BstX2I | RGATCY | 6 cut(s) | 356, 1674, 1916, 3404, 3423, 3431 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 160, 431, 869 |
| BstYI | RGATCY | 6 cut(s) | 356, 1674, 1916, 3404, 3423, 3431 |
| BstZ17I | GTATAC | 1 cut(s) | 229 |
| Bsu15I | ATCGAT | 1 cut(s) | 1077 |
| Bsu36I | CCTNAGG | 2 cut(s) | 747, 1986 |
| BsuI | GTATCC | 1 cut(s) | 3135 |
| BsuRI | GGCC | 7 cut(s) | 221, 373, 2491, 2726, 2752, 2901, 2952 |
| BsuTUI | ATCGAT | 1 cut(s) | 1077 |
| BtgI | CCRYGG | 4 cut(s) | 222, 862, 2128, 2953 |
| BtsCI | GGATG | 5 cut(s) | 269, 1515, 3221, 3356, 3574 |
| BtsI | GCAGTG | 5 cut(s) | 260, 1563, 2550, 2627, 2886 |
| BveI | ACCTGC | 1 cut(s) | 2729 |
| CaiI | CAGNNNCTG | 2 cut(s) | 27, 1316 |
| CciI | TCATGA | 1 cut(s) | 1096 |
| CfoI | GCGC | 1 cut(s) | 1107 |
| Cfr13I | GGNCC | 1 cut(s) | 2490 |
| ClaI | ATCGAT | 1 cut(s) | 1077 |
| CseI | GACGC | 1 cut(s) | 3401 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2539, 2574 |
| DdeI | CTNAG | 9 cut(s) | 353, 360, 747, 1786, 1986, 2266, 2734, 2873, 3232 |
| DraIII | CACNNNGTG | 1 cut(s) | 2311 |
| DriI | GACNNNNNGTC | 1 cut(s) | 432 |
| EaeI | YGGCCR | 1 cut(s) | 2950 |
| Eam1104I | CTCTTC | 3 cut(s) | 2307, 3131, 3252 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 432 |
| EarI | CTCTTC | 3 cut(s) | 2307, 3131, 3252 |
| Ecl136II | GAGCTC | 5 cut(s) | 117, 148, 328, 1453, 1889 |
| Eco130I | CCWWGG | 5 cut(s) | 51, 222, 862, 2953, 3427 |
| Eco24I | GRGCYC | 7 cut(s) | 119, 150, 330, 1455, 1891, 2379, 2944 |
| Eco31I | GGTCTC | 1 cut(s) | 169 |
| Eco32I | GATATC | 2 cut(s) | 409, 1503 |
| Eco53kI | GAGCTC | 5 cut(s) | 117, 148, 328, 1453, 1889 |
| Eco57I | CTGAAG | 3 cut(s) | 1632, 2460, 2562 |
| Eco81I | CCTNAGG | 2 cut(s) | 747, 1986 |
| Eco88I | CYCGRG | 1 cut(s) | 1454 |
| EcoICRI | GAGCTC | 5 cut(s) | 117, 148, 328, 1453, 1889 |
| EcoRII | CCWGG | 6 cut(s) | 272, 2075, 2447, 2640, 2747, 2998 |
| EcoRV | GATATC | 2 cut(s) | 409, 1503 |
| EcoT14I | CCWWGG | 5 cut(s) | 51, 222, 862, 2953, 3427 |
| EcoT22I | ATGCAT | 3 cut(s) | 508, 2102, 3018 |
| EcoT38I | GRGCYC | 7 cut(s) | 119, 150, 330, 1455, 1891, 2379, 2944 |
| ErhI | CCWWGG | 5 cut(s) | 51, 222, 862, 2953, 3427 |
| Esp3I | CGTCTC | 3 cut(s) | 2569, 2737, 3611 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2188, 2220, 2560, 2592 |
| FaqI | GGGAC | 6 cut(s) | 115, 406, 469, 1222, 1375, 3162 |
| FauI | CCCGC | 2 cut(s) | 2366, 3098 |
| FauNDI | CATATG | 1 cut(s) | 884 |
| FbaI | TGATCA | 2 cut(s) | 975, 3286 |
| FblI | GTMKAC | 3 cut(s) | 228, 289, 1179 |
| FokI | GGATG | 5 cut(s) | 256, 1502, 3208, 3343, 3581 |
| FriOI | GRGCYC | 7 cut(s) | 119, 150, 330, 1455, 1891, 2379, 2944 |
| FspBI | CTAG | 6 cut(s) | 444, 558, 741, 908, 1365, 1730 |
| GlaI | GCGC | 1 cut(s) | 1106 |
| GsaI | CCCAGC | 3 cut(s) | 456, 1274, 3644 |
| GsuI | CTGGAG | 4 cut(s) | 1240, 1995, 2139, 3280 |
| HaeIII | GGCC | 7 cut(s) | 221, 373, 2491, 2726, 2752, 2901, 2952 |
| HapII | CCGG | 1 cut(s) | 3225 |
| HgaI | GACGC | 1 cut(s) | 3401 |
| HhaI | GCGC | 1 cut(s) | 1107 |
| Hin1I | GRCGYC | 2 cut(s) | 2562, 3039 |
| Hin6I | GCGC | 1 cut(s) | 1105 |
| HinP1I | GCGC | 1 cut(s) | 1105 |
| HincII | GTYRAC | 3 cut(s) | 290, 2560, 3388 |
| HindII | GTYRAC | 3 cut(s) | 290, 2560, 3388 |
| HindIII | AAGCTT | 3 cut(s) | 1441, 3185, 3526 |
| HpaII | CCGG | 1 cut(s) | 3225 |
| HphI | GGTGA | 4 cut(s) | 1074, 2138, 3303, 3547 |
| Hpy166II | GTNNAC | 9 cut(s) | 229, 290, 809, 1180, 1417, 1775, 2273, 2560, 3388 |
| Hpy8I | GTNNAC | 9 cut(s) | 229, 290, 809, 1180, 1417, 1775, 2273, 2560, 3388 |
| Hpy99I | CGWCG | 5 cut(s) | 109, 294, 2522, 3417, 3420 |
| HpyAV | CCTTC | 5 cut(s) | 598, 1949, 2179, 2588, 2954 |
| HpyCH4IV | ACGT | 5 cut(s) | 805, 811, 2517, 2562, 3039 |
| HpyF3I | CTNAG | 9 cut(s) | 353, 360, 747, 1786, 1986, 2266, 2734, 2873, 3232 |
| HpySE526I | ACGT | 5 cut(s) | 805, 811, 2517, 2562, 3039 |
| Hsp92I | GRCGYC | 2 cut(s) | 2562, 3039 |
| HspAI | GCGC | 1 cut(s) | 1105 |
| Kpn2I | TCCGGA | 1 cut(s) | 3224 |
| Ksp22I | TGATCA | 2 cut(s) | 975, 3286 |
| LguI | GCTCTTC | 1 cut(s) | 2307 |
| MaeI | CTAG | 6 cut(s) | 444, 558, 741, 908, 1365, 1730 |
| MaeII | ACGT | 5 cut(s) | 805, 811, 2517, 2562, 3039 |
| MaeIII | GTNAC | 4 cut(s) | 596, 736, 2443, 3451 |
| MfeI | CAATTG | 2 cut(s) | 2538, 2763 |
| MflI | RGATCY | 6 cut(s) | 356, 1674, 1916, 3404, 3423, 3431 |
| MhlI | GDGCHC | 9 cut(s) | 119, 150, 195, 243, 330, 1455, 1891, 2379, 2944 |
| MlsI | TGGCCA | 1 cut(s) | 2952 |
| MluNI | TGGCCA | 1 cut(s) | 2952 |
| MlyI | GAGTC | 4 cut(s) | 295, 916, 2343, 3383 |
| MmeI | TCCRAC | 7 cut(s) | 832, 1526, 1894, 1944, 2780, 3398, 3540 |
| Mox20I | TGGCCA | 1 cut(s) | 2952 |
| Mph1103I | ATGCAT | 3 cut(s) | 508, 2102, 3018 |
| MroI | TCCGGA | 1 cut(s) | 3224 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1938 |
| MscI | TGGCCA | 1 cut(s) | 2952 |
| MseI | TTAA | 6 cut(s) | 570, 939, 1445, 1742, 2327, 3111 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1112, 1397, 2154, 2928, 2979, 3361, 3397 |
| Msp20I | TGGCCA | 1 cut(s) | 2952 |
| MspA1I | CMGCKG | 4 cut(s) | 697, 763, 2438, 3674 |
| MspI | CCGG | 1 cut(s) | 3225 |
| MspR9I | CCNGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| MunI | CAATTG | 2 cut(s) | 2538, 2763 |
| Mva1269I | GAATGC | 4 cut(s) | 2807, 2905, 3128, 3698 |
| MvaI | CCWGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| MvnI | CGCG | 1 cut(s) | 1105 |
| NcoI | CCATGG | 3 cut(s) | 222, 862, 2953 |
| NdeI | CATATG | 1 cut(s) | 884 |
| NmeAIII | GCCGAG | 1 cut(s) | 98 |
| NsiI | ATGCAT | 3 cut(s) | 508, 2102, 3018 |
| NspV | TTCGAA | 1 cut(s) | 3255 |
| OliI | CACNNNNGTG | 2 cut(s) | 2928, 2979 |
| PaeI | GCATGC | 3 cut(s) | 2100, 2761, 3547 |
| PaeR7I | CTCGAG | 1 cut(s) | 1454 |
| PagI | TCATGA | 1 cut(s) | 1096 |
| PasI | CCCWGGG | 1 cut(s) | 2999 |
| PciSI | GCTCTTC | 1 cut(s) | 2307 |
| PctI | GAATGC | 4 cut(s) | 2807, 2905, 3128, 3698 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1938 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 201, 583, 1913 |
| PleI | GAGTC | 4 cut(s) | 294, 916, 2343, 3383 |
| PpsI | GAGTC | 4 cut(s) | 294, 916, 2343, 3383 |
| PshAI | GACNNNNGTC | 1 cut(s) | 461 |
| PshBI | ATTAAT | 2 cut(s) | 939, 1742 |
| PsiI | TTATAA | 2 cut(s) | 683, 2174 |
| Psp124BI | GAGCTC | 5 cut(s) | 119, 150, 330, 1455, 1891 |
| Psp6I | CCWGG | 6 cut(s) | 272, 2075, 2447, 2640, 2747, 2998 |
| PspFI | CCCAGC | 3 cut(s) | 452, 1270, 3640 |
| PspGI | CCWGG | 6 cut(s) | 272, 2075, 2447, 2640, 2747, 2998 |
| PspPI | GGNCC | 1 cut(s) | 2490 |
| PstI | CTGCAG | 4 cut(s) | 307, 762, 1312, 1321 |
| PstNI | CAGNNNCTG | 2 cut(s) | 27, 1316 |
| PsuI | RGATCY | 6 cut(s) | 356, 1674, 1916, 3404, 3423, 3431 |
| PvuII | CAGCTG | 4 cut(s) | 697, 763, 2438, 3674 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1112, 1397, 2154, 2928, 2979, 3361, 3397 |
| SacI | GAGCTC | 5 cut(s) | 119, 150, 330, 1455, 1891 |
| SalI | GTCGAC | 1 cut(s) | 288 |
| SapI | GCTCTTC | 1 cut(s) | 2307 |
| SaqAI | TTAA | 6 cut(s) | 570, 939, 1445, 1742, 2327, 3111 |
| Sau96I | GGNCC | 1 cut(s) | 2490 |
| SchI | GAGTC | 4 cut(s) | 295, 916, 2343, 3383 |
| ScrFI | CCNGG | 6 cut(s) | 274, 2077, 2449, 2642, 2749, 3000 |
| SduI | GDGCHC | 9 cut(s) | 119, 150, 195, 243, 330, 1455, 1891, 2379, 2944 |
| SfcI | CTRYAG | 7 cut(s) | 303, 758, 1192, 1308, 1317, 2664, 3675 |
| Sfr274I | CTCGAG | 1 cut(s) | 1454 |
| SfuI | TTCGAA | 1 cut(s) | 3255 |
| SlaI | CTCGAG | 1 cut(s) | 1454 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1112, 1397, 2154, 2928, 2979, 3361, 3397 |
| SmlI | CTYRAG | 4 cut(s) | 60, 1454, 1539, 2566 |
| SmoI | CTYRAG | 4 cut(s) | 60, 1454, 1539, 2566 |
| SpeI | ACTAGT | 3 cut(s) | 443, 740, 1364 |
| SphI | GCATGC | 3 cut(s) | 2100, 2761, 3547 |
| SsiI | CCGC | 3 cut(s) | 2359, 3105, 3366 |
| SspI | AATATT | 1 cut(s) | 2585 |
| SspMI | CTAG | 6 cut(s) | 444, 558, 741, 908, 1365, 1730 |
| SstI | GAGCTC | 5 cut(s) | 119, 150, 330, 1455, 1891 |
| StyD4I | CCNGG | 6 cut(s) | 272, 2075, 2447, 2640, 2747, 2998 |
| StyI | CCWWGG | 5 cut(s) | 51, 222, 862, 2953, 3427 |
| TaiI | ACGT | 5 cut(s) | 808, 814, 2520, 2565, 3042 |
| TatI | WGTACW | 2 cut(s) | 1552, 3457 |
| Tru1I | TTAA | 6 cut(s) | 570, 939, 1445, 1742, 2327, 3111 |
| Tru9I | TTAA | 6 cut(s) | 570, 939, 1445, 1742, 2327, 3111 |
| TspGWI | ACGGA | 2 cut(s) | 2719, 3635 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 201, 583, 1913 |
| VspI | ATTAAT | 2 cut(s) | 939, 1742 |
| XapI | RAATTY | 2 cut(s) | 2506, 3443 |
| XbaI | TCTAGA | 1 cut(s) | 557 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3321 |
| XhoI | CTCGAG | 1 cut(s) | 1454 |
| XmiI | GTMKAC | 3 cut(s) | 228, 289, 1179 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1938 |
| XspI | CTAG | 6 cut(s) | 444, 558, 741, 908, 1365, 1730 |
| ZraI | GACGTC | 2 cut(s) | 2563, 3040 |
| Zsp2I | ATGCAT | 3 cut(s) | 508, 2102, 3018 |