Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002955

Physical Location & Seq

Genomic Coordinates Reverse (-)

9074665 .. 9085419

Gene Structure 10755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G24870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5724 bp

ATGCATGGAAGCGTTTCAGGATATCTTCTAGTAAATGCTGAGGTTGATTCCATGGGAGGAGTTATCGATAGTGGAGGTGGTATTGGTGTTAAAACATCTCCGCGCCGAACAGCTATTGAGAAGGCTCAAGCGGAGCTAAGGCAAGAGTATGATGTTCGTGAGGAAAGGAGGAGAGAATTGGAGTTTCTAGAGAAAGGCGGTAATCCCTTGGATTTCAAGTTTGGTATTGCAACTTCACATAGCGTCCAATCTACATCACTCACAGATCAGCAAGCAGAGCATTTTGTAAACAGTGAAGTCAAAGATAGTTTTGCCCTGACTGCCTCACCACATGGTGACTCGGTGGAGAGTAGCGGTAGACCTGGAGTTCCTACAATTTCTGAACCCAATACAGCAGATAATCTTTTACTGTTTGATTCTGAAAACAAGTCAGTTGAAGGGGAAAGAAATTTGAGACATCCTAATAGGCAAAACAGAACTTCTGAGTCAGAACGATCTTCCAAAGCACACACCAACCAGAATACCAAAGAAACAGAAGATTCTGCCATCTTTCGCCCGTATGCTCGGAGGAACAGATCGAAGATAAGTCGGGATCCAGCACGGTCAAGCTCTACGGATTTAGTTCAGAATCGTGGTGGTCTTGCAACGTCTATATCTATTCGCAGAGGATCAGTGGAAGGAAAGGGTTGCATTCCCGAAGCAGCCAATCAAAAGGATATGCATACAACTTCTGTATCTTGTCCAGTATTTGCAAATTCAAATGGTAATATCGTTCCGAAAAATAGAGTTTCCAGCAATTCGCTGAATACTAAGGTGGATGGTGAACCTGTTGTACGAGAGAGTACTGCTGGATCCAAGACTAGTCTATTGAAAGATGAAGCCGACATTTCGTATAGTAAAAGCTCTGCATATTTGCCAGTTGGAGAGTCTGGCCTTGCTGGGGAGAAGGCACAACTAGTTTCGACTGGTGGTTCTCCCAAAGCTGCAACAATAGCTGGCCAGAAAAATAGTTCTACCCAACTGAATGGCCTAAGAGATTCCACGGTAGAGGAAGAAAGCTTAACAAATAGAGGAGCTACAGGGACTAATGGGTTAGAGTCAGAGTCTTCTCATGCGAACAACGTAGAAGTAAATGTAGATAATGAAAGAGATCTTTATAAAGTGGACAAACTTGACTCTGATGAAATCTCTATGCAGAAGACTTTGAGAGTAGAGGGGTTACTAGATCAAACAGTTGGTGAAATGACCAAAACTAAGATTGAAGATGAGACAGGTCAATCTACCACCATTATCAGTGAGTGCATTCCTGAATGTGAAATGCAGATGAAATCGGTTAAAATTGAAAATCAAAGTCACAGAAGTACAGCTGAGATGCAAACTAAGGAGAAAAGTTCCGAGACTGAGAAAAGGCTTCAAGATGGGTTGGTTGTACTCGAAAATGACAGTAAAGTTGGTAGTATTTTATCTGAAAATCCTAGCAGCACGTTGTGCTCTGGAATTCCTCAGGCATCTGTAGACACAAGTTCTTGCACAGTTGGCAATAGTTTATTGTCAGGAACTGACATTGAAGCATTAAAACATCAGCCGAGCTCAGATGCAGTTATGTTAGATACTGTCAAGGAGGACGCTATTCTTGAGGAGGCCCGGATTATACAGGCAAAGAAAAAAAGAATTGCCGAATTATCTTGTGGTACTGCACCAGTGGAGGTCCGTGAGAAATCTCAATGGGATTTTGTCCTCGAAGAAATGGCATGGCTGGCAAATGATTTTGCGCAGGAGCGCCTTTGGAAAATGACTGCTGCCACACAAATTTGCCATCGAGTTGCTTTGACTTGTCAGTTGAGATTTGAGGAACGAAATCAGCACAGAAAGCTGAAAAAAATAGCTTCAGTCCTATCTTATGCTATTTTACAATTCTGGAGTTCTGTGGAGGCCGAGGTTCCTGGGGAGCTGGAGGAGACGAGCTTGGGAATTGTTAAGGAGACCTGCCAAGAATCTAATTGTTTGAATGGCATAAGATGTTTAGCTGCGGGTGTCAAGGAATATGCAAGTAGATTTTTGAAGTACAACAACTCTTCCATCTCCTATCATTCAGCTGCACTGTCAACACCTGACAATATGTGCGACCCAGAAATATTGGATATATCTATGGTTGATCAGCTTACAGAAGCAAGCCTCTTTTATTCAGTTCCATCTGGTGCAATGGAGGTGTACCTTAAGTCCATTGAGTCGCATCTTACACGTTGTGAGAAGTCTGGAAGTAGCATGCAGGAGGAGGTTGATACATCAGCCTATGATACTGCTGGAGATATAGGATATAATGTTACTGCGTTCGATGAGGATGAAGGAGAAACAAGTACCTATTATCTTCCGGGAGCTTTCGAGTCTAGCAGATCATTTAATATAAGCCACAAAAAAAGGAAGAATCTGATGAAGTCTCATTCTGCCCGGTCATATGATCTTGGGGACGATTTACCATACGTCAACAACACAGGTGGCTCTAACTCATCAAGTTTGATAGTAAAAAGGCCTGACAGTAATATTAATGCCGGCTCAGTTCCGACAAGGCGAGTGCGCACTGCTTCCAGGCATAGGGTTGTGAGTCCTTTTGGGTGTGCTACTACTGGGAATTTACCAGTGCCCTCGAAGACAGATGCGTCTAGTGGGGATACTAGTTCTTTCCAGGATGAGTATAGTAGTTTGCATGGTGGATCGGCAGTCCAAAAAGGCACAGAGGTTGAGTCAAGTGTTAATTTTGAAAAGCTGTTACCTTATGACATGGCTGAAACCTCAGGAAAACCTAAAAAGAAAAAGAAGACTCATCAGGGCTCCGCATATGACCAAACTTGGCATCTCAATCCGTCAGTCCATGTTGAACAGAAGGACCACTGGAAGAAGCGACCAGAGAATAATTTCGATATGAATGGTCTGTATGGTCCTCATAGTGCAAAGAAGCAAAAGACCACCAAGCAATTGGTAGAGAATAATTTTGATATGGCTATTCCTCACACTGGATCGATTCCTTCTCCGGCTGCTTCCCAGATGAGCAATATGTCCAACCCCAACAAATCTATCAAATTTATTGGAGGTCGTGATAGGGGCAGAAAAATAAAAGGCCTGAAGATTTCTCCTGGTCAGCATGGTTCTGGAAATCCATGGTCACTATTTGAGGATCAGGCGCTTGTTGTCCTGGTGCATGATATGGGGCCTAACTGGGAGCTCATTAGTGATGCAATGAACAGCACTCTTAAAATTAAGTATATATATCGCAATCCGACTGAGTGCAAGGACCGGCATAAGATTCTGATGGATAAAACTGCTGGTGATGGGGCTGATAGTGCAGAAGATTCAGGGAATTCTCAGTCTTATCCATCCACTTTGCCTGGCATACCAAAGGGAAGTGCGAGACAGTTGTTTCAACGACTGCAAGGGCCAATGGAGGAAGATACCCTGAAGTCTCATTTTGAGAAGATTTGTTTGATTGGGAAGAAATTACATTATAGAAAGACACAGAACGATGGTCGGGATCCCAAGCAAATAGTACCAGTTCACAATTCACAAGTCATGGCTCTCTCTCAAGTATTCCCGAATAATCTGAATGGAGGTGTTCTTACGCCCCTTGATGTCTGTGACGCATCAACTTCAGGTCAAGATGTATTTTCACTTGAAAATCCAGGTCTTCCAATGTTGAATCAGGGAACGCCAGTGCTCCCTACTTCTGGAGCACATCCATCCACTCCTGGATCATCTGGTGTTGTTCTGAGCAACAATTTGCCAACCACATCTGGCCTACAGAGTGCTTCTGTCAGGGATGGTAGATTCAATGTTCCTAGAGGGTCTTTGCCACTTGATGAACAACACCGACTACAACAATTTAATCAAACGTTATCTGGTAGAAACCTGCAGCAGCCCTCCTTATCAACTCCTGCAGCTGTCTCAGGATCTGATCGTGGACATCGCATGGTTCCTGGTGGAAATGCTATGGGTGTAAGTGGAATGAACAGGAACACACCCATGTCAAGGCCTGGTTTTCAAGGGATGGCCTCAGCAGCAATGCCAAATACTGGTAATATGCATACCTCTGGCATGGTAGGAATTCCAAACACTGGAAATATTCATTCCGGAGGAGGAGCTTCTCAAGGAAACTCCATGATCAGGCCTCGTGAAGCTGTGCAGCATATGATGCGGATGCAGGCTGCTCAAGGGAACAGTCCGGGGATCCCAGCTTTCAGTAATTTGAGTTCTGGATTTACCAACCAGACAACTCCTGTTCAGGCGTACCCAGGCCATCTTTCCCAGCAGCATCAGATGTCACCGCAGTCACATGTGCTTGGCAACTCGCATCATCCTCATCTCCAGAGCCCAAGTCAAGCCACTGGGGCACAGCAGGAAGCATTTGCTATCCGTCAAAGACAAATTCACCAGAGGTATTTGCAGCAACAGCAACAGCAGTTTCCAGCATCTGGTTCTATGATGCCACATGTACAACAACCTCAGGGCTCTTCTGTTTCTTCTTCTTCACAAAACAGTCCTCAGACTCAACCACCTGTTTCGCCCCAGCCATTATCCATGCCCCCGGTGTCGCCCTCTCCTAATATTAATGCTATGGCACAACAGAAACCTCAAAAATCTCAGTTGGCGCTTCATGGTTTGGGTAGGAGTCCTCAGTCTGGTACTTCTGGAGTGAACAATCAAGCTGGAAAACAAAGGCAGCGACAACTTCAGCAGTCTGCAAGACAGCATCCACACCAGCGGCAGCCAACACAAGGTCAACAGCTGAATAAACAACTGAAGGGGATGGGTAGAGGCAACATGATCCATCAGAACATCACTGTCGATCAGTCACACCTGAATGGCCTTACCATGCCCCAAGGAAATCAAGCTACCGAAAAAGGAGAGATAGCGGTTTCAGTTAGGCCTGATCAGCAGTCTAGTGTGGGGACTACCACGAGCACGGATCTGCAGTCTAAACCATTTGTTTCTCCCTTGTCTTCAAATCATTCACAGCAACTGCCAAAATCATTCCCTGGTGCTTTGTCTCCATCCCCTCAACAACAGATGCAATTACATTCAGACAATAGCATCCAAGGCCAGAGCTCACCTGCGACCCCATGTAATATTTTATCCACCTCTAGCCTGTCAATTGCACCAGCGGTTGCACCTTCTAACCATCAGCATTTGTTGATACACCAAAAGCAGCGCAATCAAGTGCAATCAACAGCTCAGAGAGTTGTTCAACATAATCATCTAGGGAACTCTGAGTTATCAAAGAAGTCCCAAGCTGAATGTATGCCACGTGTTCCACAGTCTGTAACCAATACCACCCAAACTGCTAGTATGGGTACGACCAAGGGTATGCCTCAAGCGAGTAATGATTTGAAAAACATAAAAGCAGTTGGTTCTACTGCGGTGCCTGCTTTGGAACCTCCATCTTGTGTTGCTTCTGTGCAAAGCACTGCTTCGAAAGTAGTAAACAATTCCAATACAGATTCAGCAGGAAATGATCCAGTATCAACACCGAACCAAGGACTAGCTCAAAAGCACGGGATCAAGGGCGTTACACAGAGACAACAACAGTCTCTACCTTCAGAAGAAAAGAGACCGAAATTGCCAGAGAAGCCGACTGTACAAAATCAGAAACACCTTGCTTCTGAGGAGCAGCCTCATTTAGAAGAAGCACAAGAATTATCATCTTCCAAGCCTCCTGATACAAAAGTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009909 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032991 GO:0035267 GO:0036211 GO:0040034 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048046 GO:0048506 GO:0048509 GO:0048510 GO:0048580 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0051239 GO:0051276 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1990234 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSA Myb_DNA-bind_6

Protein Analysis

1907

Amino Acids

206.41

Weight (kDa)

7.5

Isoelectric Point (pI)

54.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSA	PF07529	570 - 609	1.6e-07	HSA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24870 AT3G24870 AT3G24870 AT3G24870 AT3G24880 AT3G24880 AT3G24880
fragaria_vesca	FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860
malus_domestica	MD05G1174400.v1.1 MD10G1163500.v1.1
prunus_persica	Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1
pyrus_communis	pycom05g16120 pycom10g14100
rosa_chinensis	RchiOBHm_Chr6g0284671
rosa_laevigata	RLG00000012732
rosa_multiflora	Rmu_co8337863.1_g000001 Rmu_sc0007474.1_g000006
rosa_roxburghii	Rroxscaffold_7G00184490
rosa_rugosa	Rorug06G0165200 Rorug06G0165200 Rorug06G0165300 Rorug06G0165400
rosa_samantha	Rh6AG278300 Rh6BG278300 Rh6CG280600 Rh6DG273300
rosa_wichuraiana	Rw6G023920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1158
AarI	CACCTGC	1 cut(s)	5110
AasI	GACNNNNNNGTC	1 cut(s)	2656
Acc16I	TGCGCA	2 cut(s)	1773, 2576
Acc36I	ACCTGC	3 cut(s)	1994, 3909, 5110
AccB1I	GGYRCC	1 cut(s)	5410
AccB7I	CCANNNNNTGG	3 cut(s)	4064, 4106, 4463
AccI	GTMKAC	2 cut(s)	358, 1515
AccII	CGCG	1 cut(s)	103
AccIII	TCCGGA	1 cut(s)	4121
AclI	AACGTT	1 cut(s)	3884
AcoI	YGGCCR	1 cut(s)	997
AcsI	RAATTY	9 cut(s)	448, 754, 1497, 1809, 2629, 3077, 3355, 4095, 4416
AcuI	CTGAAG	7 cut(s)	1872, 3140, 3473, 3627, 4706, 4811, 5571
AcvI	CACGTG	1 cut(s)	5297
AdeI	CACNNNGTG	3 cut(s)	335, 1488, 2246
AflII	CTTAAG	1 cut(s)	2216
AflIII	ACRYGT	4 cut(s)	2240, 4324, 4480, 5296
AhlI	ACTAGT	3 cut(s)	860, 955, 2672
Alw21I	GWGCWC	7 cut(s)	1493, 1592, 3222, 3711, 3727, 4955, 5099
AlwNI	CAGNNNCTG	4 cut(s)	1559, 3944, 4463, 5011
Aor13HI	TCCGGA	1 cut(s)	4121
ApoI	RAATTY	9 cut(s)	448, 754, 1497, 1809, 2629, 3077, 3355, 4095, 4416
AseI	ATTAAT	2 cut(s)	2544, 4599
Asp700I	GAANNNNTTC	2 cut(s)	13, 2912
AspLEI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4642, 5202
AspS9I	GGNCC	7 cut(s)	1642, 1708, 2884, 2936, 3206, 3289, 3431
AsuC2I	CCSGG	5 cut(s)	1645, 2373, 2449, 4215, 4577
AsuHPI	GGTGA	8 cut(s)	318, 347, 833, 1250, 3335, 4305, 4412, 5091
AsuII	TTCGAA	1 cut(s)	5462
AvaII	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
AxyI	CCTNAGG	3 cut(s)	1503, 2791, 4494
BaeGI	GKGCMC	2 cut(s)	2643, 4384
BaeI	ACNNNNGTAYC	3 cut(s)	717, 750, 5700
BalI	TGGCCA	1 cut(s)	999
BamHI	GGATCC	4 cut(s)	592, 851, 3526, 4218
BanI	GGYRCC	1 cut(s)	5410
BanII	GRGCYC	6 cut(s)	1592, 2831, 3222, 4364, 4502, 5099
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
BauI	CACGAG	2 cut(s)	4161, 4948
BbrPI	CACGTG	1 cut(s)	5297
BbsI	GAAGAC	6 cut(s)	1098, 1205, 2654, 2822, 3671, 4983
Bbv12I	GWGCWC	7 cut(s)	1493, 1592, 3222, 3711, 3727, 4955, 5099
BbvCI	CCTCAGC	2 cut(s)	39, 4045
BciVI	GTATCC	1 cut(s)	2662
BclI	TGATCA	3 cut(s)	2155, 4152, 4921
BcnI	CCSGG	5 cut(s)	1645, 2373, 2449, 4215, 4577
BcuI	ACTAGT	3 cut(s)	860, 955, 2672
BfmI	CTRYAG	6 cut(s)	1077, 1512, 3791, 3902, 3927, 4961
BfoI	RGCGCY	3 cut(s)	1783, 3182, 4643
BfrI	CTTAAG	1 cut(s)	2216
BfuAI	ACCTGC	3 cut(s)	1994, 3909, 5110
BfuI	GTATCC	1 cut(s)	2662
BglI	GCCNNNNNGGC	1 cut(s)	4379
BglII	AGATCT	1 cut(s)	1150
BmcAI	AGTACT	1 cut(s)	844
Bme18I	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
BmgT120I	GGNCC	7 cut(s)	1642, 1708, 2884, 2936, 3206, 3289, 3431
BmrI	ACTGGG	3 cut(s)	2634, 3223, 4386
BmuI	ACTGGG	3 cut(s)	2634, 3223, 4386
BpiI	GAAGAC	6 cut(s)	1098, 1205, 2654, 2822, 3671, 4983
BpmI	CTGGAG	7 cut(s)	384, 1939, 1973, 2325, 3741, 4340, 4701
Bpu10I	CCTNAGC	3 cut(s)	39, 137, 4045
Bpu14I	TTCGAA	1 cut(s)	5462
BpuEI	CTTGAG	6 cut(s)	111, 1655, 3561, 4122, 4185, 5346
BpuMI	CCSGG	5 cut(s)	1645, 2373, 2449, 4215, 4577
Bsa29I	ATCGAT	2 cut(s)	66, 3017
BsaAI	YACGTR	1 cut(s)	5297
BsaI	GGTCTC	2 cut(s)	1976, 5593
BsaWI	WCCGGW	1 cut(s)	4121
Bse118I	RCCGGY	2 cut(s)	2549, 3291
Bse21I	CCTNAGG	3 cut(s)	1503, 2791, 4494
Bse3DI	GCAATG	3 cut(s)	2208, 3240, 4059
BseAI	TCCGGA	1 cut(s)	4121
BseCI	ATCGAT	2 cut(s)	66, 3017
BseMI	GCAATG	3 cut(s)	2208, 3240, 4059
BseRI	GAGGAG	9 cut(s)	72, 184, 1086, 1652, 1970, 2288, 4140, 4143, 5669
BseSI	GKGCMC	2 cut(s)	2643, 4384
BseYI	CCCAGC	4 cut(s)	938, 4222, 4296, 4557
BsgI	GTGCAG	4 cut(s)	1680, 2082, 3360, 4193
Bsh1236I	CGCG	1 cut(s)	103
BshNI	GGYRCC	1 cut(s)	5410
BshVI	ATCGAT	2 cut(s)	66, 3017
BsiHKAI	GWGCWC	7 cut(s)	1493, 1592, 3222, 3711, 3727, 4955, 5099
BsiSI	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4122, 4214, 4577
BslFI	GGGAC	4 cut(s)	1096, 2480, 4954, 5260
BsmBI	CGTCTC	1 cut(s)	1952
BsmFI	GGGAC	4 cut(s)	1096, 2480, 4954, 5260
BsmI	GAATGC	2 cut(s)	690, 1302
Bso31I	GGTCTC	2 cut(s)	1976, 5593
Bsp119I	TTCGAA	1 cut(s)	5462
Bsp13I	TCCGGA	1 cut(s)	4121
Bsp1407I	TGTACA	2 cut(s)	4483, 5626
Bsp19I	CCATGG	2 cut(s)	51, 3155
BspDI	ATCGAT	2 cut(s)	66, 3017
BspEI	TCCGGA	1 cut(s)	4121
BspFNI	CGCG	1 cut(s)	103
BspMAI	CTGCAG	3 cut(s)	3906, 3931, 4965
BspMI	ACCTGC	3 cut(s)	1994, 3909, 5110
BspQI	GCTCTTC	1 cut(s)	4507
BspT104I	TTCGAA	1 cut(s)	5462
BspT107I	GGYRCC	1 cut(s)	5410
BspTI	CTTAAG	1 cut(s)	2216
BspTNI	GGTCTC	2 cut(s)	1976, 5593
BsrDI	GCAATG	3 cut(s)	2208, 3240, 4059
BsrFI	RCCGGY	2 cut(s)	2549, 3291
BsrGI	TGTACA	2 cut(s)	4483, 5626
BssAI	RCCGGY	2 cut(s)	2549, 3291
BssSI	CACGAG	2 cut(s)	4161, 4948
BssT1I	CCWWGG	7 cut(s)	51, 207, 3155, 4870, 5086, 5349, 5524
Bst2BI	CACGAG	2 cut(s)	4161, 4948
Bst6I	CTCTTC	2 cut(s)	2080, 4507
BstAFI	CTTAAG	1 cut(s)	2216
BstAPI	GCANNNNNTGC	2 cut(s)	1488, 4183
BstAUI	TGTACA	2 cut(s)	4483, 5626
BstBAI	YACGTR	1 cut(s)	5297
BstBI	TTCGAA	1 cut(s)	5462
BstC8I	GCNNGC	8 cut(s)	273, 997, 1758, 2173, 2267, 2551, 4194, 5415
BstDSI	CCRYGG	3 cut(s)	51, 1041, 3155
BstFNI	CGCG	1 cut(s)	103
BstH2I	RGCGCY	3 cut(s)	1783, 3182, 4643
BstHHI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4642, 5202
BstNSI	RCATGY	3 cut(s)	2269, 4328, 4484
BstSFI	CTRYAG	6 cut(s)	1077, 1512, 3791, 3902, 3927, 4961
BstSLI	GKGCMC	2 cut(s)	2643, 4384
BstUI	CGCG	1 cut(s)	103
BstV2I	GAAGAC	6 cut(s)	1098, 1205, 2654, 2822, 3671, 4983
BstX2I	RGATCY	7 cut(s)	592, 851, 1150, 3526, 3941, 4218, 4957
BstXI	CCANNNNNNTGG	2 cut(s)	1025, 2974
BstYI	RGATCY	7 cut(s)	592, 851, 1150, 3526, 3941, 4218, 4957
Bsu15I	ATCGAT	2 cut(s)	66, 3017
Bsu36I	CCTNAGG	3 cut(s)	1503, 2791, 4494
BsuI	GTATCC	1 cut(s)	2662
BsuTUI	ATCGAT	2 cut(s)	66, 3017
BtgI	CCRYGG	3 cut(s)	51, 1041, 3155
BtgZI	GCGATG	1 cut(s)	3941
BtsI	GCAGTG	2 cut(s)	2577, 5454
BveI	ACCTGC	3 cut(s)	1994, 3909, 5110
Cac8I	GCNNGC	8 cut(s)	273, 997, 1758, 2173, 2267, 2551, 4194, 5415
CaiI	CAGNNNCTG	4 cut(s)	1559, 3944, 4463, 5011
CfoI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4642, 5202
Cfr10I	RCCGGY	2 cut(s)	2549, 3291
Cfr13I	GGNCC	7 cut(s)	1642, 1708, 2884, 2936, 3206, 3289, 3431
ClaI	ATCGAT	2 cut(s)	66, 3017
CseI	GACGC	4 cut(s)	232, 1634, 2646, 3641
CspCI	CAANNNNNGTGG	2 cut(s)	2476, 2511
DraIII	CACNNNGTG	3 cut(s)	335, 1488, 2246
DrdI	GACNNNNNNGTC	1 cut(s)	2656
DseDI	GACNNNNNNGTC	1 cut(s)	2656
EaeI	YGGCCR	1 cut(s)	997
Eam1104I	CTCTTC	2 cut(s)	2080, 4507
EarI	CTCTTC	2 cut(s)	2080, 4507
Ecl136II	GAGCTC	3 cut(s)	1590, 3220, 5097
Eco130I	CCWWGG	7 cut(s)	51, 207, 3155, 4870, 5086, 5349, 5524
Eco147I	AGGCCT	5 cut(s)	2530, 3117, 4024, 4159, 4918
Eco24I	GRGCYC	6 cut(s)	1592, 2831, 3222, 4364, 4502, 5099
Eco31I	GGTCTC	2 cut(s)	1976, 5593
Eco32I	GATATC	1 cut(s)	23
Eco47I	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
Eco53kI	GAGCTC	3 cut(s)	1590, 3220, 5097
Eco57I	CTGAAG	7 cut(s)	1872, 3140, 3473, 3627, 4706, 4811, 5571
Eco72I	CACGTG	1 cut(s)	5297
Eco81I	CCTNAGG	3 cut(s)	1503, 2791, 4494
EcoICRI	GAGCTC	3 cut(s)	1590, 3220, 5097
EcoO109I	RGGNCCY	1 cut(s)	3206
EcoRI	GAATTC	3 cut(s)	1497, 3355, 4095
EcoRV	GATATC	1 cut(s)	23
EcoT14I	CCWWGG	7 cut(s)	51, 207, 3155, 4870, 5086, 5349, 5524
EcoT22I	ATGCAT	3 cut(s)	6, 723, 4077
EcoT38I	GRGCYC	6 cut(s)	1592, 2831, 3222, 4364, 4502, 5099
ErhI	CCWWGG	7 cut(s)	51, 207, 3155, 4870, 5086, 5349, 5524
Esp3I	CGTCTC	1 cut(s)	1952
FalI	AAGNNNNNCTT	2 cut(s)	5443, 5475
FaqI	GGGAC	4 cut(s)	1096, 2480, 4954, 5260
FauI	CCCGC	1 cut(s)	2023
FauNDI	CATATG	3 cut(s)	2455, 2836, 4179
FbaI	TGATCA	3 cut(s)	2155, 4152, 4921
FblI	GTMKAC	2 cut(s)	358, 1515
FriOI	GRGCYC	6 cut(s)	1592, 2831, 3222, 4364, 4502, 5099
FspAI	RTGCGCAY	1 cut(s)	2576
FspI	TGCGCA	2 cut(s)	1773, 2576
GlaI	GCGC	7 cut(s)	104, 1773, 1781, 2576, 3180, 4641, 5201
GsaI	CCCAGC	4 cut(s)	942, 4226, 4300, 4561
GsuI	CTGGAG	7 cut(s)	384, 1939, 1973, 2325, 3741, 4340, 4701
HaeII	RGCGCY	3 cut(s)	1783, 3182, 4643
HapII	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4122, 4214, 4577
HgaI	GACGC	4 cut(s)	232, 1634, 2646, 3641
HhaI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4642, 5202
Hin6I	GCGC	7 cut(s)	103, 1772, 1780, 2575, 3179, 4640, 5200
HinP1I	GCGC	7 cut(s)	103, 1772, 1780, 2575, 3179, 4640, 5200
HincII	GTYRAC	3 cut(s)	2106, 2485, 4772
HindII	GTYRAC	3 cut(s)	2106, 2485, 4772
HindIII	AAGCTT	1 cut(s)	1057
HpaII	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4122, 4214, 4577
HphI	GGTGA	8 cut(s)	318, 347, 833, 1250, 3335, 4305, 4412, 5091
HpyCH4IV	ACGT	7 cut(s)	647, 1122, 1484, 2242, 2481, 3884, 5296
HpySE526I	ACGT	7 cut(s)	647, 1122, 1484, 2242, 2481, 3884, 5296
HspAI	GCGC	7 cut(s)	103, 1772, 1780, 2575, 3179, 4640, 5200
Kpn2I	TCCGGA	1 cut(s)	4121
KroI	GCCGGC	1 cut(s)	2549
KroNI	GCCGGC	1 cut(s)	2551
Ksp22I	TGATCA	3 cut(s)	2155, 4152, 4921
LguI	GCTCTTC	1 cut(s)	4507
MaeII	ACGT	7 cut(s)	647, 1122, 1484, 2242, 2481, 3884, 5296
MfeI	CAATTG	2 cut(s)	2972, 5142
MflI	RGATCY	7 cut(s)	592, 851, 1150, 3526, 3941, 4218, 4957
MlsI	TGGCCA	1 cut(s)	999
MluNI	TGGCCA	1 cut(s)	999
MmeI	TCCRAC	4 cut(s)	901, 2585, 3081, 3299
Mox20I	TGGCCA	1 cut(s)	999
Mph1103I	ATGCAT	3 cut(s)	6, 723, 4077
MroI	TCCGGA	1 cut(s)	4121
MroNI	GCCGGC	1 cut(s)	2549
MroXI	GAANNNNTTC	2 cut(s)	13, 2912
MscI	TGGCCA	1 cut(s)	999
MslI	CAYNNNNRTG	2 cut(s)	4013, 4851
Msp20I	TGGCCA	1 cut(s)	999
MspA1I	CMGCKG	6 cut(s)	1367, 2096, 3932, 4753, 4777, 5153
MspCI	CTTAAG	1 cut(s)	2216
MspI	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4122, 4214, 4577
MunI	CAATTG	2 cut(s)	2972, 5142
Mva1269I	GAATGC	2 cut(s)	690, 1302
MvnI	CGCG	1 cut(s)	103
NaeI	GCCGGC	1 cut(s)	2551
NciI	CCSGG	5 cut(s)	1645, 2373, 2449, 4215, 4577
NcoI	CCATGG	2 cut(s)	51, 3155
NdeI	CATATG	3 cut(s)	2455, 2836, 4179
NgoMIV	GCCGGC	1 cut(s)	2549
NmeAIII	GCCGAG	2 cut(s)	1611, 1960
NmuCI	GTSAC	7 cut(s)	335, 1352, 3159, 3629, 4311, 4320, 4842
NsbI	TGCGCA	2 cut(s)	1773, 2576
NsiI	ATGCAT	3 cut(s)	6, 723, 4077
NspI	RCATGY	3 cut(s)	2269, 4328, 4484
NspV	TTCGAA	1 cut(s)	5462
PaeI	GCATGC	1 cut(s)	2269
PaqCI	CACCTGC	1 cut(s)	5110
PceI	AGGCCT	5 cut(s)	2530, 3117, 4024, 4159, 4918
PciI	ACATGT	2 cut(s)	4324, 4480
PciSI	GCTCTTC	1 cut(s)	4507
PctI	GAATGC	2 cut(s)	690, 1302
PdiI	GCCGGC	1 cut(s)	2551
PdmI	GAANNNNTTC	2 cut(s)	13, 2912
PflMI	CCANNNNNTGG	3 cut(s)	4064, 4106, 4463
PfoI	TCCNGGA	3 cut(s)	2371, 2682, 3739
PmaCI	CACGTG	1 cut(s)	5297
PmlI	CACGTG	1 cut(s)	5297
Ppu21I	YACGTR	1 cut(s)	5297
PscI	ACATGT	2 cut(s)	4324, 4480
PshBI	ATTAAT	2 cut(s)	2544, 4599
PsiI	TTATAA	1 cut(s)	1158
Psp124BI	GAGCTC	3 cut(s)	1592, 3222, 5099
Psp1406I	AACGTT	1 cut(s)	3884
PspCI	CACGTG	1 cut(s)	5297
PspFI	CCCAGC	4 cut(s)	938, 4222, 4296, 4557
PspPI	GGNCC	7 cut(s)	1642, 1708, 2884, 2936, 3206, 3289, 3431
PsrI	GAACNNNNNNTAC	4 cut(s)	816, 848, 4225, 4257
PstI	CTGCAG	3 cut(s)	3906, 3931, 4965
PstNI	CAGNNNCTG	4 cut(s)	1559, 3944, 4463, 5011
PsuI	RGATCY	7 cut(s)	592, 851, 1150, 3526, 3941, 4218, 4957
PvuII	CAGCTG	4 cut(s)	1367, 2096, 3932, 4777
RseI	CAYNNNNRTG	2 cut(s)	4013, 4851
SacI	GAGCTC	3 cut(s)	1592, 3222, 5099
SapI	GCTCTTC	1 cut(s)	4507
Sau96I	GGNCC	7 cut(s)	1642, 1708, 2884, 2936, 3206, 3289, 3431
ScaI	AGTACT	1 cut(s)	844
SfcI	CTRYAG	6 cut(s)	1077, 1512, 3791, 3902, 3927, 4961
SfuI	TTCGAA	1 cut(s)	5462
SinI	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
SmiMI	CAYNNNNRTG	2 cut(s)	4013, 4851
SmlI	CTYRAG	7 cut(s)	126, 1634, 2216, 3576, 4137, 4200, 5361
SmoI	CTYRAG	7 cut(s)	126, 1634, 2216, 3576, 4137, 4200, 5361
SpeI	ACTAGT	3 cut(s)	860, 955, 2672
SphI	GCATGC	1 cut(s)	2269
SseBI	AGGCCT	5 cut(s)	2530, 3117, 4024, 4159, 4918
SspI	AATATT	5 cut(s)	2136, 2542, 4114, 4597, 5119
SstI	GAGCTC	3 cut(s)	1592, 3222, 5099
StuI	AGGCCT	5 cut(s)	2530, 3117, 4024, 4159, 4918
StyI	CCWWGG	7 cut(s)	51, 207, 3155, 4870, 5086, 5349, 5524
TaiI	ACGT	7 cut(s)	650, 1125, 1487, 2245, 2484, 3887, 5299
TaqII	GACCGA	1 cut(s)	5617
TatI	WGTACW	6 cut(s)	842, 1361, 1429, 2064, 4483, 5626
TauI	GCSGC	1 cut(s)	4756
TseFI	GTSAC	7 cut(s)	335, 1352, 3159, 3629, 4311, 4320, 4842
Tsp45I	GTSAC	7 cut(s)	335, 1352, 3159, 3629, 4311, 4320, 4842
TspGWI	ACGGA	5 cut(s)	629, 1700, 2850, 4394, 4970
Van91I	CCANNNNNTGG	3 cut(s)	4064, 4106, 4463
Vha464I	CTTAAG	1 cut(s)	2216
VpaK11BI	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
VspI	ATTAAT	2 cut(s)	2544, 4599
XapI	RAATTY	9 cut(s)	448, 754, 1497, 1809, 2629, 3077, 3355, 4095, 4416
XbaI	TCTAGA	1 cut(s)	187
XceI	RCATGY	3 cut(s)	2269, 4328, 4484
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2971
XmiI	GTMKAC	2 cut(s)	358, 1515
XmnI	GAANNNNTTC	2 cut(s)	13, 2912
ZrmI	AGTACT	1 cut(s)	844
Zsp2I	ATGCAT	3 cut(s)	6, 723, 4077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.