Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0002955

Physical Location & Seq

Genomic Coordinates Forward (+)

46710942 .. 46723676

Gene Structure 12735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G023920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3201 bp

ATGGAGGTGGAGTCTGTTCGTGATTTTGAAAAGCATCCACAATGTGACCATGCAGAAACATCAAAGCATAAAAAGAAGAAGAAGGCAAAACATCTGGGTTCTGCTTATGACCAAGTATGGCAGGTGGATTCACCTACTCATAATGAGCAGAGGGATCATTCAAAAAAGAGATTAGAAAGTCATCATTTTGAGTCCAATGGAACATTTGGTTTATATGGGCAACATAATGCAAAGAGGCTGAAGATATCAAAACAGTCTCTAGACAATACTTATGATGGTATAACTCCAATGACTGGGTCCATTCCTTCTCCAGTGGCGTCCCAAATGAGTAATATGACCAATCCGAGTAAATTGATGAAGTTGATCGGTGGTCGGGACAAGGGACGGAAAGCTAAATCAATGAAGATGCCTGTTGGCCAGCCAGGTTCTGGAAGTCCATGGTCACTATTCGAAGATCAGGCACTTGTTGTTCTTGTACATGATATGGGTCCAAATTGGGAACTCATAAGTGATGCTATCAACAGTACTCTGCACCTAAAGTGTATCTTCCGCAAGCCTAAGGAATGCAAGGAGCGTCACAAAATTTTAATGGATTTGAATACTGGTGATGGGGCTGACAGTGCTGAAGATTCAGGGTCATCACAGCCTTATCCATCTACAATCCCTGGCATTCCAAAGGGAAGTGCCAGACAGTTATTTCAACGCTTGCAAGAGCCAATGGAAGAGGACACTCTCAAGTCTCATTTTGAAAGAATAATTAAGATTGGGCAGAAGCATCATTATAGGAGGAGTCAGAGTGATAACCAGGATCCAAAACAAGGAACGACAGTCCACAATTCTCATGTTATCGCTCTTTCCCAAGTATGTCCGAATAACCTGAATGGTGTTATTCTAACGCCTCTTGATCTCTGTGATGCCACATCATCAAGCCCAGATGTTCTTCCGACTGCATATCAAGGTTCTCACACTAGTGGCTTACCAATGGCAAATCAGGGCGCTATGGCGTCATTACTGCCCTCTGGGCCAAATGCCTCATTACAGGGAACTTCTGGTATGGTTCTTGGTAGCAACTTGTCATCACCATCTGGCCCGCTTAGTGCGACAGTCAGGGATGGTAGGTACAGTGGTCCAAGGGCATCTACTTTACCAGTTGAAGAGCAGCAAAGAATGCAACACTACAATCAAATGTTATCTGGTAGAAACATTCAGCAGTCCAGCCTGTCCGTACCTGGGGCTCTTCCAGGAGGTACTGATCGTGGTGTTCGAATGGTACCTGGTGCAAATGGTATGGGCATGATGTGTGGGATGAATAGAAGCACAATGTCAAGGCCAGGGTTTCAGGGAATGGCTTCTTCCTCGATGCTGAATACTGGGAGTATGCTTTCATCCAGTATGGTTGGAATACCAAGTCCTGTAAATATGCACTCTGGAGCTGGTTCCGGTCCAGGAAATTTGATGTTAAGACCTCGCGAGGGTCACATGATGCGGCCTGCCCATAATCCGGATCACCAAAGGCAACTTATGGCTCCAGAGCTTCAGATGCAGGTCACGCAAGGGAATGGCCAAGGTATTGCTCCGTTCAATGGGTTGAGTTCTGGCTTTCCTAGTCAGACAACTCCATCAGGTGCACAAATGTATCCAGGCCATCCCCAGCAGCAACATCAGTTATCCCCACAACAATCTCATGCAGTCGGCAGCCCTCATCACCCTCATCTTCAAGGCCCCAATCATGTGACAGGGTCGCCGCAGCAAGCCTATGCCATGCGCATGGCTAAAGTGCATCAACAGCGGTTTTTGCAGCAGCAGCAGCAGCAGTTTGCATCATCCAATTCTTTGGTGCCGCATGTCCAACCACAGGCCCAACTCCCCATTTCTTCAACTTTGCAAAATAGTTCCCAGATTCAGTCACAAAGTTCACCTCACCCAGCATCTATGTCCCCTAGTACACCTTCTTCCCCAATGACTCCGGTATCATCCCAACACCAGCAGAAACATCACCTGCCACCTCATGGGATGAGTCGGAATCCTGGTGCAAGCGGGTTGACTAATCAAATAGGGAAGCAACGACAAAGGCCACAACAACACCATTTTCAGCAATCTGGGAGGCACCACCCTCAGCAGCGGCCATTTGGGCAATCTCAGCAGCAGGCTAAACTTTCGAAGGGAATGGGAAGAGGGAATCCAATGGTGCATCAAAACCTTGCCATCGATCCTATAAACATCTCCATTGATCCATCTCATCTGAATGGGCTTTCGATGCCTCCGGGAAGTCAAGCTCTGGATAAAGGAGAACAGATCATGCAGTTAATGCAAGGTCAAGCTGCATATTCGGGGTCTGGCGTCAACCCAGTAACATCAAAACCATTGGTTCCTCAATCATCAAACAACTCTCCGATGCAGCAAAAGTTGCATTCTAGCTCAGCTACCTCTTCGACGAAGCAACTCCAGCAAAAGCCATCTCATTCTGATAACAGCACTCAAGGCCAGGCACCAGCTGTTCCTTCTGGTCATGCAATATCAGCTTCACATCAATCTGTGTCTCCAGCAATTGTGTCTTCCAATCACCAGCAGGTGCAGCCACAGCAACAGCAACAGAAGCAAGCTAATCAGACTCAGCCATATGTTCAGAGAGTCCAGCAGAATCGTCAAGTGAATTCGGAGCTTCCAAGCAAGCCTCCAAATGATTTAGCTTCAGCCGAAGAGCAGCCTGTGAATAGTACTTCTCTGATCGGTTCGAGCATGGCAATTCCTCAGTCCTCTATTGATTCGTCTAATGTAGTACCGGTTTCTTCTGGCATTACTCAATGGAAATCATCAGAAGCAGTATATGATTCTAATCTGCCAAATTCAACAGCTCAAGAGGGTTCACTTGGGAGCCCATCACCAACAAATTCATCTGGGAATGAGCCAGTGCCCCCTTTTAGTCAAGGTTTAGGCCCAAGGCAGTTATCTGGTAACTTTGCCTCTCATGGACATATTGCTGGTGCGCAATGGCAGCAGAAGCAGCTACTGCAAAAGCCTCCTTCGCTACCACCCCTGTCCCAACAACTCTACGAGCAACAAGAGCAACAGCAGCAGCAGGAACAAGAATCACCCCAACATCAACTGCCTTTGCCACAGCAGTCTCAGCAACAAATGCAGCATCTGCCAGCAGGGCAAGGTGGTTTGTATATGATGCCTAGTAATTCAAAATCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032991 GO:0035267 GO:0036211 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043968 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071704 GO:0071840 GO:0097346 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSA Myb_DNA-bind_6

Protein Analysis

1066

Amino Acids

115.21

Weight (kDa)

9.46

Isoelectric Point (pI)

65.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_6	PF13921	147 - 195	1.6e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24870 AT3G24870 AT3G24870 AT3G24870 AT3G24880 AT3G24880 AT3G24880
fragaria_vesca	FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860
malus_domestica	MD05G1174400.v1.1 MD10G1163500.v1.1
prunus_persica	Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1
pyrus_communis	pycom05g16120 pycom10g14100
rosa_chinensis	RchiOBHm_Chr6g0284671
rosa_laevigata	RLG00000012732
rosa_multiflora	Rmu_co8337863.1_g000001 Rmu_sc0007474.1_g000006
rosa_roxburghii	Rroxscaffold_7G00184490
rosa_rugosa	Rorug06G0165200 Rorug06G0165200 Rorug06G0165300 Rorug06G0165400
rosa_samantha	Rh6AG278300 Rh6BG278300 Rh6CG280600 Rh6DG273300
rosa_wichuraiana	Rw6G023920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	112, 2007, 2560
Acc16I	TGCGCA	2 cut(s)	1766, 2988
Acc36I	ACCTGC	4 cut(s)	112, 1534, 2007, 2560
Acc65I	GGTACC	1 cut(s)	1270
AccB1I	GGYRCC	4 cut(s)	1270, 1837, 2106, 2488
AccB7I	CCANNNNNTGG	3 cut(s)	293, 428, 2009
AccII	CGCG	1 cut(s)	1470
AccIII	TCCGGA	1 cut(s)	1501
AciI	CCGC	8 cut(s)	550, 1091, 1486, 1745, 1789, 1841, 2037, 2122
AclWI	GGATC	6 cut(s)	162, 803, 816, 1512, 2204, 2225
AcoI	YGGCCR	3 cut(s)	415, 1561, 2123
AcsI	RAATTY	5 cut(s)	582, 1450, 2653, 2845, 2890
AcuI	CTGAAG	4 cut(s)	260, 645, 1520, 2676
AcyI	GRCGYC	3 cut(s)	317, 1004, 2340
AdeI	CACNNNGTG	1 cut(s)	44
AfaI	GTAC	9 cut(s)	477, 526, 1121, 1227, 1249, 1272, 1945, 2719, 2781
AfiI	CCNNNNNNNGG	9 cut(s)	293, 428, 818, 1230, 1472, 1501, 1583, 1855, 2009
AgeI	ACCGGT	1 cut(s)	2782
AhlI	ACTAGT	1 cut(s)	968
AleI	CACNNNNGTG	1 cut(s)	969
Alw21I	GWGCWC	1 cut(s)	1630
Alw26I	GTCTC	4 cut(s)	261, 744, 2544, 3129
Alw44I	GTGCAC	1 cut(s)	1626
AlwI	GGATC	6 cut(s)	162, 803, 816, 1512, 2204, 2225
AlwNI	CAGNNNCTG	3 cut(s)	428, 3010, 3145
Aor13HI	TCCGGA	1 cut(s)	1501
ApaLI	GTGCAC	1 cut(s)	1626
ApoI	RAATTY	5 cut(s)	582, 1450, 2653, 2845, 2890
AsiGI	ACCGGT	1 cut(s)	2782
Asp700I	GAANNNNTTC	1 cut(s)	1348
Asp718I	GGTACC	1 cut(s)	1270
AspLEI	GCGC	3 cut(s)	998, 1767, 2989
AspS9I	GGNCC	9 cut(s)	297, 488, 1022, 1088, 1127, 1442, 1721, 1858, 2936
AsuC2I	CCSGG	1 cut(s)	2265
AsuII	TTCGAA	3 cut(s)	450, 1264, 2159
AvaII	GGWCC	4 cut(s)	297, 488, 1127, 1442
AxyI	CCTNAGG	1 cut(s)	558
BaeGI	GKGCMC	2 cut(s)	1630, 2916
BaeI	ACNNNNGTAYC	6 cut(s)	1111, 1144, 1619, 1652, 1953, 1986
BalI	TGGCCA	2 cut(s)	417, 1563
BamHI	GGATCC	1 cut(s)	808
BanI	GGYRCC	4 cut(s)	1270, 1837, 2106, 2488
BanII	GRGCYC	2 cut(s)	1237, 2879
BarI	GAAGNNNNNNTAC	2 cut(s)	1936, 1968
BbsI	GAAGAC	1 cut(s)	2547
Bbv12I	GWGCWC	1 cut(s)	1630
BbvCI	CCTCAGC	1 cut(s)	2115
BciVI	GTATCC	1 cut(s)	1647
BcnI	CCSGG	1 cut(s)	2265
BcoDI	GTCTC	4 cut(s)	261, 744, 2544, 3129
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	6 cut(s)	260, 969, 1605, 1941, 2415, 3180
BfoI	RGCGCY	1 cut(s)	999
BfuAI	ACCTGC	4 cut(s)	112, 1534, 2007, 2560
BfuI	GTATCC	1 cut(s)	1647
BglI	GCCNNNNNGGC	3 cut(s)	1021, 2131, 3154
BlpI	GCTNAGC	1 cut(s)	2419
BmcAI	AGTACT	2 cut(s)	526, 2719
Bme18I	GGWCC	4 cut(s)	297, 488, 1127, 1442
BmgT120I	GGNCC	9 cut(s)	297, 488, 1022, 1088, 1127, 1442, 1721, 1858, 2936
BmrI	ACTGGG	3 cut(s)	303, 1380, 2342
BmuI	ACTGGG	3 cut(s)	303, 1380, 2342
BpiI	GAAGAC	1 cut(s)	2547
BpmI	CTGGAG	5 cut(s)	294, 1449, 1512, 2429, 2526
Bpu10I	CCTNAGC	1 cut(s)	2115
Bpu1102I	GCTNAGC	1 cut(s)	2419
Bpu14I	TTCGAA	3 cut(s)	450, 1264, 2159
BpuEI	CTTGAG	3 cut(s)	719, 2463, 2841
BpuMI	CCSGG	1 cut(s)	2265
Bsa29I	ATCGAT	1 cut(s)	2208
BsaBI	GATNNNNATC	1 cut(s)	2835
BsaHI	GRCGYC	3 cut(s)	317, 1004, 2340
BsaJI	CCNNGG	7 cut(s)	437, 664, 1130, 1229, 1331, 1564, 2939
BsaWI	WCCGGW	4 cut(s)	1439, 1501, 1966, 2782
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 781, 811
Bsc4I	CCNNNNNNNGG	9 cut(s)	293, 428, 818, 1230, 1472, 1501, 1583, 1855, 2009
Bse118I	RCCGGY	1 cut(s)	2782
Bse1I	ACTGG	8 cut(s)	298, 311, 607, 1148, 1375, 1389, 2348, 2909
Bse21I	CCTNAGG	1 cut(s)	558
Bse3DI	GCAATG	1 cut(s)	2996
Bse8I	GATNNNNATC	1 cut(s)	2835
BseAI	TCCGGA	1 cut(s)	1501
BseCI	ATCGAT	1 cut(s)	2208
BseDI	CCNNGG	7 cut(s)	437, 664, 1130, 1229, 1331, 1564, 2939
BseGI	GGATG	8 cut(s)	34, 1117, 1311, 1385, 1645, 1823, 1973, 2019
BseJI	GATNNNNATC	1 cut(s)	2835
BseLI	CCNNNNNNNGG	9 cut(s)	293, 428, 818, 1230, 1472, 1501, 1583, 1855, 2009
BseMI	GCAATG	1 cut(s)	2996
BseMII	CTCAG	6 cut(s)	2129, 2153, 2433, 2627, 2765, 3140
BseNI	ACTGG	8 cut(s)	298, 311, 607, 1148, 1375, 1389, 2348, 2909
BseRI	GAGGAG	1 cut(s)	802
BseSI	GKGCMC	2 cut(s)	1630, 2916
BseYI	CCCAGC	2 cut(s)	1650, 1924
BsgI	GTGCAG	2 cut(s)	515, 2594
Bsh1236I	CGCG	1 cut(s)	1470
BshNI	GGYRCC	4 cut(s)	1270, 1837, 2106, 2488
BshTI	ACCGGT	1 cut(s)	2782
BshVI	ATCGAT	1 cut(s)	2208
BsiHKAI	GWGCWC	1 cut(s)	1630
BsiSI	CCGG	5 cut(s)	1440, 1502, 1967, 2264, 2783
BslFI	GGGAC	5 cut(s)	304, 389, 396, 1921, 3025
BslI	CCNNNNNNNGG	9 cut(s)	293, 428, 818, 1230, 1472, 1501, 1583, 1855, 2009
BsmAI	GTCTC	4 cut(s)	261, 744, 2544, 3129
BsmFI	GGGAC	5 cut(s)	304, 389, 396, 1921, 3025
BsmI	GAATGC	4 cut(s)	569, 669, 1173, 2410
Bsp119I	TTCGAA	3 cut(s)	450, 1264, 2159
Bsp1286I	GDGCHC	4 cut(s)	1237, 1630, 2879, 2916
Bsp13I	TCCGGA	1 cut(s)	1501
Bsp1407I	TGTACA	1 cut(s)	475
Bsp1720I	GCTNAGC	1 cut(s)	2419
Bsp19I	CCATGG	1 cut(s)	437
Bsp68I	TCGCGA	1 cut(s)	1470
BspACI	CCGC	8 cut(s)	550, 1091, 1486, 1745, 1789, 1841, 2037, 2122
BspCNI	CTCAG	6 cut(s)	2128, 2152, 2432, 2626, 2764, 3139
BspDI	ATCGAT	1 cut(s)	2208
BspEI	TCCGGA	1 cut(s)	1501
BspFNI	CGCG	1 cut(s)	1470
BspMI	ACCTGC	4 cut(s)	112, 1534, 2007, 2560
BspPI	GGATC	6 cut(s)	162, 803, 816, 1512, 2204, 2225
BspQI	GCTCTTC	3 cut(s)	1149, 1242, 2694
BspT104I	TTCGAA	3 cut(s)	450, 1264, 2159
BspT107I	GGYRCC	4 cut(s)	1270, 1837, 2106, 2488
BsrDI	GCAATG	1 cut(s)	2996
BsrFI	RCCGGY	1 cut(s)	2782
BsrGI	TGTACA	1 cut(s)	475
BsrI	ACTGG	8 cut(s)	298, 311, 607, 1148, 1375, 1389, 2348, 2909
BssAI	RCCGGY	1 cut(s)	2782
BssECI	CCNNGG	7 cut(s)	437, 664, 1130, 1229, 1331, 1564, 2939
BssNI	GRCGYC	3 cut(s)	317, 1004, 2340
BssT1I	CCWWGG	4 cut(s)	437, 1130, 1564, 2939
Bst4CI	ACNGT	7 cut(s)	255, 524, 620, 693, 829, 1105, 1124
Bst6I	CTCTTC	6 cut(s)	717, 1149, 1242, 2167, 2434, 2694
BstACI	GRCGYC	3 cut(s)	317, 1004, 2340
BstAPI	GCANNNNNTGC	6 cut(s)	1168, 2308, 2407, 3010, 3136, 3145
BstAUI	TGTACA	1 cut(s)	475
BstBI	TTCGAA	3 cut(s)	450, 1264, 2159
BstDEI	CTNAG	8 cut(s)	558, 1094, 2115, 2139, 2419, 2613, 2751, 3126
BstDSI	CCRYGG	1 cut(s)	437
BstF5I	GGATG	8 cut(s)	34, 1117, 1311, 1385, 1645, 1823, 1973, 2019
BstFNI	CGCG	1 cut(s)	1470
BstH2I	RGCGCY	1 cut(s)	999
BstHHI	GCGC	3 cut(s)	998, 1767, 2989
BstMAI	GTCTC	4 cut(s)	261, 744, 2544, 3129
BstNSI	RCATGY	1 cut(s)	1847
BstSLI	GKGCMC	2 cut(s)	1630, 2916
BstUI	CGCG	1 cut(s)	1470
BstV2I	GAAGAC	1 cut(s)	2547
BstX2I	RGATCY	1 cut(s)	808
BstXI	CCANNNNNNTGG	2 cut(s)	1768, 1834
BstYI	RGATCY	1 cut(s)	808
Bsu15I	ATCGAT	1 cut(s)	2208
Bsu36I	CCTNAGG	1 cut(s)	558
BsuI	GTATCC	1 cut(s)	1647
BsuTUI	ATCGAT	1 cut(s)	2208
BtgI	CCRYGG	1 cut(s)	437
BtsCI	GGATG	8 cut(s)	34, 1117, 1311, 1385, 1645, 1823, 1973, 2019
BtsIMutI	CAGTG	4 cut(s)	318, 625, 1129, 2916
BtuMI	TCGCGA	1 cut(s)	1470
BveI	ACCTGC	4 cut(s)	112, 1534, 2007, 2560
CaiI	CAGNNNCTG	3 cut(s)	428, 3010, 3145
CfoI	GCGC	3 cut(s)	998, 1767, 2989
Cfr10I	RCCGGY	1 cut(s)	2782
Cfr13I	GGNCC	9 cut(s)	297, 488, 1022, 1088, 1127, 1442, 1721, 1858, 2936
ClaI	ATCGAT	1 cut(s)	2208
CseI	GACGC	4 cut(s)	306, 563, 993, 2329
CsiI	ACCWGGT	1 cut(s)	1273
Csp6I	GTAC	9 cut(s)	476, 525, 1120, 1226, 1248, 1271, 1944, 2718, 2780
CspAI	ACCGGT	1 cut(s)	2782
CviQI	GTAC	9 cut(s)	476, 525, 1120, 1226, 1248, 1271, 1944, 2718, 2780
DdeI	CTNAG	8 cut(s)	558, 1094, 2115, 2139, 2419, 2613, 2751, 3126
DraIII	CACNNNGTG	1 cut(s)	44
EaeI	YGGCCR	3 cut(s)	415, 1561, 2123
Eam1104I	CTCTTC	6 cut(s)	717, 1149, 1242, 2167, 2434, 2694
EarI	CTCTTC	6 cut(s)	717, 1149, 1242, 2167, 2434, 2694
Eco130I	CCWWGG	4 cut(s)	437, 1130, 1564, 2939
Eco24I	GRGCYC	2 cut(s)	1237, 2879
Eco32I	GATATC	1 cut(s)	246
Eco47I	GGWCC	4 cut(s)	297, 488, 1127, 1442
Eco57I	CTGAAG	4 cut(s)	260, 645, 1520, 2676
Eco81I	CCTNAGG	1 cut(s)	558
EcoO109I	RGGNCCY	1 cut(s)	1721
EcoRI	GAATTC	1 cut(s)	2653
EcoRV	GATATC	1 cut(s)	246
EcoT14I	CCWWGG	4 cut(s)	437, 1130, 1564, 2939
EcoT38I	GRGCYC	2 cut(s)	1237, 2879
ErhI	CCWWGG	4 cut(s)	437, 1130, 1564, 2939
FalI	AAGNNNNNCTT	2 cut(s)	530, 562
FaqI	GGGAC	5 cut(s)	304, 389, 396, 1921, 3025
FauI	CCCGC	2 cut(s)	1098, 2030
FauNDI	CATATG	1 cut(s)	2620
FokI	GGATG	8 cut(s)	21, 1124, 1318, 1372, 1632, 1810, 1960, 2026
FriOI	GRGCYC	2 cut(s)	1237, 2879
FspAI	RTGCGCAY	1 cut(s)	1766
FspBI	CTAG	6 cut(s)	260, 969, 1605, 1941, 2415, 3180
FspI	TGCGCA	2 cut(s)	1766, 2988
GlaI	GCGC	3 cut(s)	997, 1766, 2988
GsaI	CCCAGC	2 cut(s)	1654, 1928
GsuI	CTGGAG	5 cut(s)	294, 1449, 1512, 2429, 2526
HaeII	RGCGCY	1 cut(s)	999
HapII	CCGG	5 cut(s)	1440, 1502, 1967, 2264, 2783
HgaI	GACGC	4 cut(s)	306, 563, 993, 2329
HhaI	GCGC	3 cut(s)	998, 1767, 2989
Hin1I	GRCGYC	3 cut(s)	317, 1004, 2340
Hin6I	GCGC	3 cut(s)	996, 1765, 2987
HinP1I	GCGC	3 cut(s)	996, 1765, 2987
HincII	GTYRAC	2 cut(s)	2043, 2344
HindII	GTYRAC	2 cut(s)	2043, 2344
HpaII	CCGG	5 cut(s)	1440, 1502, 1967, 2264, 2783
Hpy166II	GTNNAC	7 cut(s)	832, 1628, 1916, 1946, 2043, 2344, 2867
Hpy8I	GTNNAC	7 cut(s)	832, 1628, 1916, 1946, 2043, 2344, 2867
Hpy99I	CGWCG	1 cut(s)	2437
HpyAV	CCTTC	6 cut(s)	76, 315, 1959, 2155, 2511, 3033
HpyCH4III	ACNGT	7 cut(s)	255, 524, 620, 693, 829, 1105, 1124
HpyF3I	CTNAG	8 cut(s)	558, 1094, 2115, 2139, 2419, 2613, 2751, 3126
Hsp92I	GRCGYC	3 cut(s)	317, 1004, 2340
HspAI	GCGC	3 cut(s)	996, 1765, 2987
Kpn2I	TCCGGA	1 cut(s)	1501
KpnI	GGTACC	1 cut(s)	1274
LguI	GCTCTTC	3 cut(s)	1149, 1242, 2694
LmnI	GCTCC	6 cut(s)	571, 1430, 1531, 1579, 2659, 2874
MabI	ACCWGGT	1 cut(s)	1273
MaeI	CTAG	6 cut(s)	260, 969, 1605, 1941, 2415, 3180
MaeIII	GTNAC	9 cut(s)	44, 441, 575, 1475, 1546, 1732, 1905, 2350, 2954
MfeI	CAATTG	1 cut(s)	2547
MflI	RGATCY	1 cut(s)	808
MhlI	GDGCHC	4 cut(s)	1237, 1630, 2879, 2916
MlsI	TGGCCA	2 cut(s)	417, 1563
MluNI	TGGCCA	2 cut(s)	417, 1563
MlyI	GAGTC	7 cut(s)	20, 200, 799, 1957, 2026, 2605, 2640
MmeI	TCCRAC	4 cut(s)	968, 1378, 1873, 2000
Mox20I	TGGCCA	2 cut(s)	417, 1563
MroI	TCCGGA	1 cut(s)	1501
MroXI	GAANNNNTTC	1 cut(s)	1348
MscI	TGGCCA	2 cut(s)	417, 1563
MseI	TTAA	4 cut(s)	587, 759, 1460, 2306
MslI	CAYNNNNRTG	3 cut(s)	969, 1766, 2244
Msp20I	TGGCCA	2 cut(s)	417, 1563
MspA1I	CMGCKG	3 cut(s)	1789, 2122, 2495
MspI	CCGG	5 cut(s)	1440, 1502, 1967, 2264, 2783
MunI	CAATTG	1 cut(s)	2547
Mva1269I	GAATGC	4 cut(s)	569, 669, 1173, 2410
MvnI	CGCG	1 cut(s)	1470
NciI	CCSGG	1 cut(s)	2265
NcoI	CCATGG	1 cut(s)	437
NdeI	CATATG	1 cut(s)	2620
NmuCI	GTSAC	7 cut(s)	44, 441, 575, 1475, 1546, 1732, 1905
NruI	TCGCGA	1 cut(s)	1470
NsbI	TGCGCA	2 cut(s)	1766, 2988
NspI	RCATGY	1 cut(s)	1847
NspV	TTCGAA	3 cut(s)	450, 1264, 2159
OliI	CACNNNNGTG	1 cut(s)	969
PaqCI	CACCTGC	3 cut(s)	112, 2007, 2560
PciSI	GCTCTTC	3 cut(s)	1149, 1242, 2694
PcsI	WCGNNNNNNNCGW	1 cut(s)	1261
PctI	GAATGC	4 cut(s)	569, 669, 1173, 2410
PdmI	GAANNNNTTC	1 cut(s)	1348
PfeI	GAWTC	9 cut(s)	128, 629, 1900, 2023, 2179, 2641, 2765, 2831, 3089
PflFI	GACNNNGTC	2 cut(s)	295, 1738
PflMI	CCANNNNNTGG	3 cut(s)	293, 428, 2009
PfoI	TCCNGGA	3 cut(s)	1240, 1444, 2263
PinAI	ACCGGT	1 cut(s)	2782
PleI	GAGTC	7 cut(s)	19, 199, 798, 1957, 2025, 2605, 2639
PpsI	GAGTC	7 cut(s)	19, 199, 798, 1957, 2025, 2605, 2639
PspFI	CCCAGC	2 cut(s)	1650, 1924
PspPI	GGNCC	9 cut(s)	297, 488, 1022, 1088, 1127, 1442, 1721, 1858, 2936
PstNI	CAGNNNCTG	3 cut(s)	428, 3010, 3145
PsuI	RGATCY	1 cut(s)	808
PsyI	GACNNNGTC	2 cut(s)	295, 1738
PvuII	CAGCTG	1 cut(s)	2495
RruI	TCGCGA	1 cut(s)	1470
RsaI	GTAC	9 cut(s)	477, 526, 1121, 1227, 1249, 1272, 1945, 2719, 2781
RsaNI	GTAC	9 cut(s)	476, 525, 1120, 1226, 1248, 1271, 1944, 2718, 2780
RseI	CAYNNNNRTG	3 cut(s)	969, 1766, 2244
SapI	GCTCTTC	3 cut(s)	1149, 1242, 2694
SaqAI	TTAA	4 cut(s)	587, 759, 1460, 2306
Sau96I	GGNCC	9 cut(s)	297, 488, 1022, 1088, 1127, 1442, 1721, 1858, 2936
ScaI	AGTACT	2 cut(s)	526, 2719
SchI	GAGTC	7 cut(s)	20, 200, 799, 1957, 2026, 2605, 2640
SduI	GDGCHC	4 cut(s)	1237, 1630, 2879, 2916
SexAI	ACCWGGT	1 cut(s)	1273
SfuI	TTCGAA	3 cut(s)	450, 1264, 2159
SinI	GGWCC	4 cut(s)	297, 488, 1127, 1442
SmiMI	CAYNNNNRTG	3 cut(s)	969, 1766, 2244
SmlI	CTYRAG	3 cut(s)	734, 2478, 2856
SmoI	CTYRAG	3 cut(s)	734, 2478, 2856
SpeI	ACTAGT	1 cut(s)	968
SsiI	CCGC	8 cut(s)	550, 1091, 1486, 1745, 1789, 1841, 2037, 2122
SspMI	CTAG	6 cut(s)	260, 969, 1605, 1941, 2415, 3180
StyI	CCWWGG	4 cut(s)	437, 1130, 1564, 2939
TaaI	ACNGT	7 cut(s)	255, 524, 620, 693, 829, 1105, 1124
TaqI	TCGA	8 cut(s)	450, 1264, 1358, 2159, 2208, 2255, 2432, 2735
TatI	WGTACW	4 cut(s)	475, 524, 1943, 2717
TauI	GCSGC	4 cut(s)	1489, 1747, 1843, 2125
TfiI	GAWTC	9 cut(s)	128, 629, 1900, 2023, 2179, 2641, 2765, 2831, 3089
Tru1I	TTAA	4 cut(s)	587, 759, 1460, 2306
Tru9I	TTAA	4 cut(s)	587, 759, 1460, 2306
TscAI	CASTG	4 cut(s)	318, 625, 1129, 2916
TseFI	GTSAC	7 cut(s)	44, 441, 575, 1475, 1546, 1732, 1905
Tsp45I	GTSAC	7 cut(s)	44, 441, 575, 1475, 1546, 1732, 1905
TspDTI	ATGAA	5 cut(s)	371, 416, 1322, 1374, 2883
TspGWI	ACGGA	3 cut(s)	400, 1213, 1566
TspRI	CASTG	4 cut(s)	318, 625, 1129, 2916
Tth111I	GACNNNGTC	2 cut(s)	295, 1738
Van91I	CCANNNNNTGG	3 cut(s)	293, 428, 2009
VneI	GTGCAC	1 cut(s)	1626
VpaK11BI	GGWCC	4 cut(s)	297, 488, 1127, 1442
XapI	RAATTY	5 cut(s)	582, 1450, 2653, 2845, 2890
XbaI	TCTAGA	1 cut(s)	259
XceI	RCATGY	1 cut(s)	1847
XcmI	CCANNNNNNNNNTGG	1 cut(s)	425
XmnI	GAANNNNTTC	1 cut(s)	1348
XspI	CTAG	6 cut(s)	260, 969, 1605, 1941, 2415, 3180
ZrmI	AGTACT	2 cut(s)	526, 2719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.