HSA
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24870 AT3G24870 AT3G24870 AT3G24870 AT3G24880 AT3G24880 AT3G24880 |
| fragaria_vesca | FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 |
| malus_domestica | MD05G1174400.v1.1 MD10G1163500.v1.1 |
| prunus_persica | Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 |
| pyrus_communis | pycom05g16120 pycom10g14100 |
| rosa_chinensis | RchiOBHm_Chr6g0284671 |
| rosa_laevigata | RLG00000012732 |
| rosa_multiflora | Rmu_co8337863.1_g000001 Rmu_sc0007474.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00184490 |
| rosa_rugosa | Rorug06G0165200 Rorug06G0165200 Rorug06G0165300 Rorug06G0165400 |
| rosa_samantha | Rh6AG278300 Rh6BG278300 Rh6CG280600 Rh6DG273300 |
| rosa_wichuraiana | Rw6G023920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2233 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1585, 4822 |
| Acc16I | TGCGCA | 1 cut(s) | 2690 |
| Acc36I | ACCTGC | 2 cut(s) | 1598, 2233 |
| AccB1I | GGYRCC | 3 cut(s) | 3836, 4690, 4962 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 3140, 3275, 4427, 4862 |
| AccI | GTMKAC | 3 cut(s) | 200, 307, 1650 |
| AccII | CGCG | 3 cut(s) | 1863, 4311, 4611 |
| AccIII | TCCGGA | 1 cut(s) | 4345 |
| AclI | AACGTT | 1 cut(s) | 1425 |
| AcoI | YGGCCR | 2 cut(s) | 4336, 4405 |
| AcsI | RAATTY | 6 cut(s) | 131, 397, 2241, 3197, 5518, 5670 |
| AcuI | CTGAAG | 5 cut(s) | 801, 2555, 3492, 4739, 4931 |
| AcyI | GRCGYC | 1 cut(s) | 3845 |
| AdeI | CACNNNGTG | 3 cut(s) | 329, 3938, 4780 |
| AfaI | GTAC | 4 cut(s) | 1177, 1263, 2812, 3324 |
| AflIII | ACRYGT | 1 cut(s) | 1170 |
| AhlI | ACTAGT | 1 cut(s) | 1136 |
| Alw21I | GWGCWC | 4 cut(s) | 4078, 4266, 5275, 5606 |
| Alw26I | GTCTC | 8 cut(s) | 1767, 1967, 2399, 2660, 3216, 4998, 5133, 5544 |
| Alw44I | GTGCAC | 2 cut(s) | 4262, 5271 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1466, 1613, 3275, 4088, 5425 |
| Aor13HI | TCCGGA | 1 cut(s) | 4345 |
| ApaI | GGGCCC | 1 cut(s) | 3338 |
| ApaLI | GTGCAC | 2 cut(s) | 4262, 5271 |
| ApoI | RAATTY | 6 cut(s) | 131, 397, 2241, 3197, 5518, 5670 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 4189 |
| AspLEI | GCGC | 2 cut(s) | 1865, 2691 |
| AsuC2I | CCSGG | 2 cut(s) | 3513, 4778 |
| BaeGI | GKGCMC | 4 cut(s) | 3338, 3535, 4266, 5275 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3952, 3985 |
| BalI | TGGCCA | 2 cut(s) | 4338, 4407 |
| BamHI | GGATCC | 3 cut(s) | 622, 3143, 3655 |
| BanI | GGYRCC | 3 cut(s) | 3836, 4690, 4962 |
| BanII | GRGCYC | 3 cut(s) | 3338, 4078, 5704 |
| BauI | CACGAG | 1 cut(s) | 606 |
| BbsI | GAAGAC | 4 cut(s) | 438, 492, 1113, 1377 |
| Bbv12I | GWGCWC | 4 cut(s) | 4078, 4266, 5275, 5606 |
| BceAI | ACGGC | 3 cut(s) | 34, 2628, 5622 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 2668, 2702, 3611, 3645, 5489, 5523 |
| BciVI | GTATCC | 2 cut(s) | 2156, 4236 |
| BclI | TGATCA | 3 cut(s) | 214, 2803, 2956 |
| BcnI | CCSGG | 2 cut(s) | 3513, 4778 |
| BcoDI | GTCTC | 8 cut(s) | 1767, 1967, 2399, 2660, 3216, 4998, 5133, 5544 |
| BcuI | ACTAGT | 1 cut(s) | 1136 |
| BfmI | CTRYAG | 4 cut(s) | 1605, 2335, 5426, 5498 |
| BfuAI | ACCTGC | 2 cut(s) | 1598, 2233 |
| BfuI | GTATCC | 2 cut(s) | 2156, 4236 |
| BglII | AGATCT | 3 cut(s) | 917, 1388, 2140 |
| BmcAI | AGTACT | 1 cut(s) | 2812 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1377 |
| BpiI | GAAGAC | 4 cut(s) | 438, 492, 1113, 1377 |
| BpmI | CTGGAG | 8 cut(s) | 2120, 2751, 3141, 3297, 4092, 4290, 5100, 5282 |
| Bpu10I | CCTNAGC | 2 cut(s) | 86, 888 |
| BpuEI | CTTGAG | 8 cut(s) | 158, 983, 1533, 1802, 2052, 5153, 5541, 5666 |
| BpuMI | CCSGG | 2 cut(s) | 3513, 4778 |
| BsaBI | GATNNNNATC | 1 cut(s) | 810 |
| BsaHI | GRCGYC | 1 cut(s) | 3845 |
| BsaI | GGTCTC | 1 cut(s) | 1967 |
| BsaWI | WCCGGW | 1 cut(s) | 4345 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 171, 201, 5377, 5407 |
| Bse118I | RCCGGY | 1 cut(s) | 5590 |
| Bse3DI | GCAATG | 2 cut(s) | 2331, 3828 |
| Bse8I | GATNNNNATC | 1 cut(s) | 810 |
| BseAI | TCCGGA | 1 cut(s) | 4345 |
| BseJI | GATNNNNATC | 1 cut(s) | 810 |
| BseMI | GCAATG | 2 cut(s) | 2331, 3828 |
| BseRI | GAGGAG | 2 cut(s) | 2411, 3649 |
| BseSI | GKGCMC | 4 cut(s) | 3338, 3535, 4266, 5275 |
| BseYI | CCCAGC | 2 cut(s) | 3260, 4830 |
| BsgI | GTGCAG | 4 cut(s) | 1037, 1107, 2590, 3362 |
| Bsh1236I | CGCG | 3 cut(s) | 1863, 4311, 4611 |
| Bsh1285I | CGRYCG | 1 cut(s) | 307 |
| BshNI | GGYRCC | 3 cut(s) | 3836, 4690, 4962 |
| BsiEI | CGRYCG | 1 cut(s) | 307 |
| BsiHKAI | GWGCWC | 4 cut(s) | 4078, 4266, 5275, 5606 |
| BsiSI | CCGG | 5 cut(s) | 3512, 4346, 4778, 4873, 5591 |
| BsmAI | GTCTC | 8 cut(s) | 1767, 1967, 2399, 2660, 3216, 4998, 5133, 5544 |
| BsmI | GAATGC | 3 cut(s) | 1417, 3516, 4014 |
| Bso31I | GGTCTC | 1 cut(s) | 1967 |
| Bsp120I | GGGCCC | 1 cut(s) | 3334 |
| Bsp1286I | GDGCHC | 7 cut(s) | 3338, 3535, 4078, 4266, 5275, 5606, 5704 |
| Bsp13I | TCCGGA | 1 cut(s) | 4345 |
| Bsp1407I | TGTACA | 1 cut(s) | 3322 |
| Bsp19I | CCATGG | 3 cut(s) | 3284, 3840, 4861 |
| Bsp68I | TCGCGA | 1 cut(s) | 4311 |
| BspEI | TCCGGA | 1 cut(s) | 4345 |
| BspFNI | CGCG | 3 cut(s) | 1863, 4311, 4611 |
| BspHI | TCATGA | 1 cut(s) | 1930 |
| BspMAI | CTGCAG | 3 cut(s) | 1609, 5430, 5502 |
| BspMI | ACCTGC | 2 cut(s) | 1598, 2233 |
| BspQI | GCTCTTC | 2 cut(s) | 4083, 5023 |
| BspT107I | GGYRCC | 3 cut(s) | 3836, 4690, 4962 |
| BspTNI | GGTCTC | 1 cut(s) | 1967 |
| BsrDI | GCAATG | 2 cut(s) | 2331, 3828 |
| BsrFI | RCCGGY | 1 cut(s) | 5590 |
| BsrGI | TGTACA | 1 cut(s) | 3322 |
| BssAI | RCCGGY | 1 cut(s) | 5590 |
| BssNI | GRCGYC | 1 cut(s) | 3845 |
| BssSI | CACGAG | 1 cut(s) | 606 |
| BssT1I | CCWWGG | 7 cut(s) | 474, 3284, 3787, 3840, 4408, 4811, 4861 |
| Bst2BI | CACGAG | 1 cut(s) | 606 |
| Bst6I | CTCTTC | 5 cut(s) | 1674, 2306, 3564, 4083, 5023 |
| BstACI | GRCGYC | 1 cut(s) | 3845 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 269, 4009, 4137, 4327, 4462, 5161 |
| BstAUI | TGTACA | 1 cut(s) | 3322 |
| BstDSI | CCRYGG | 3 cut(s) | 3284, 3840, 4861 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1940, 1982 |
| BstFNI | CGCG | 3 cut(s) | 1863, 4311, 4611 |
| BstHHI | GCGC | 2 cut(s) | 1865, 2691 |
| BstMAI | GTCTC | 8 cut(s) | 1767, 1967, 2399, 2660, 3216, 4998, 5133, 5544 |
| BstMCI | CGRYCG | 1 cut(s) | 307 |
| BstNSI | RCATGY | 5 cut(s) | 1174, 2392, 2689, 4159, 5667 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1377 |
| BstSFI | CTRYAG | 4 cut(s) | 1605, 2335, 5426, 5498 |
| BstSLI | GKGCMC | 4 cut(s) | 3338, 3535, 4266, 5275 |
| BstUI | CGCG | 3 cut(s) | 1863, 4311, 4611 |
| BstV2I | GAAGAC | 4 cut(s) | 438, 492, 1113, 1377 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 458, 2635, 2941, 4237, 5041 |
| BsuI | GTATCC | 2 cut(s) | 2156, 4236 |
| BtgI | CCRYGG | 3 cut(s) | 3284, 3840, 4861 |
| BtgZI | GCGATG | 1 cut(s) | 4326 |
| BtsI | GCAGTG | 4 cut(s) | 1090, 2175, 2691, 3535 |
| BtuMI | TCGCGA | 1 cut(s) | 4311 |
| BveI | ACCTGC | 2 cut(s) | 1598, 2233 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1466, 1613, 3275, 4088, 5425 |
| CciI | TCATGA | 1 cut(s) | 1930 |
| CfoI | GCGC | 2 cut(s) | 1865, 2691 |
| Cfr10I | RCCGGY | 1 cut(s) | 5590 |
| CseI | GACGC | 3 cut(s) | 1811, 3410, 3834 |
| Csp6I | GTAC | 4 cut(s) | 1176, 1262, 2811, 3323 |
| CviQI | GTAC | 4 cut(s) | 1176, 1262, 2811, 3323 |
| DraIII | CACNNNGTG | 3 cut(s) | 329, 3938, 4780 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1585, 4822 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1585, 4822 |
| EaeI | YGGCCR | 2 cut(s) | 4336, 4405 |
| Eam1104I | CTCTTC | 5 cut(s) | 1674, 2306, 3564, 4083, 5023 |
| EarI | CTCTTC | 5 cut(s) | 1674, 2306, 3564, 4083, 5023 |
| EciI | GGCGGA | 1 cut(s) | 36 |
| Ecl136II | GAGCTC | 1 cut(s) | 4076 |
| Eco130I | CCWWGG | 7 cut(s) | 474, 3284, 3787, 3840, 4408, 4811, 4861 |
| Eco147I | AGGCCT | 1 cut(s) | 2647 |
| Eco24I | GRGCYC | 3 cut(s) | 3338, 4078, 5704 |
| Eco31I | GGTCTC | 1 cut(s) | 1967 |
| Eco32I | GATATC | 4 cut(s) | 639, 812, 4512, 5370 |
| Eco53kI | GAGCTC | 1 cut(s) | 4076 |
| Eco57I | CTGAAG | 5 cut(s) | 801, 2555, 3492, 4739, 4931 |
| EcoICRI | GAGCTC | 1 cut(s) | 4076 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1940, 1982 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1544, 2201 |
| EcoRI | GAATTC | 2 cut(s) | 397, 5670 |
| EcoRV | GATATC | 4 cut(s) | 639, 812, 4512, 5370 |
| EcoT14I | CCWWGG | 7 cut(s) | 474, 3284, 3787, 3840, 4408, 4811, 4861 |
| EcoT22I | ATGCAT | 2 cut(s) | 408, 1566 |
| EcoT38I | GRGCYC | 3 cut(s) | 3338, 4078, 5704 |
| ErhI | CCWWGG | 7 cut(s) | 474, 3284, 3787, 3840, 4408, 4811, 4861 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 69, 101 |
| FauI | CCCGC | 3 cut(s) | 2151, 2631, 4133 |
| FauNDI | CATATG | 5 cut(s) | 508, 2455, 2575, 2887, 4323 |
| FbaI | TGATCA | 3 cut(s) | 214, 2803, 2956 |
| FblI | GTMKAC | 3 cut(s) | 200, 307, 1650 |
| FriOI | GRGCYC | 3 cut(s) | 3338, 4078, 5704 |
| FspAI | RTGCGCAY | 1 cut(s) | 2690 |
| FspI | TGCGCA | 1 cut(s) | 2690 |
| GlaI | GCGC | 2 cut(s) | 1864, 2690 |
| GsaI | CCCAGC | 2 cut(s) | 3264, 4834 |
| GsuI | CTGGAG | 8 cut(s) | 2120, 2751, 3141, 3297, 4092, 4290, 5100, 5282 |
| HapII | CCGG | 5 cut(s) | 3512, 4346, 4778, 4873, 5591 |
| HgaI | GACGC | 3 cut(s) | 1811, 3410, 3834 |
| HhaI | GCGC | 2 cut(s) | 1865, 2691 |
| Hin1I | GRCGYC | 1 cut(s) | 3845 |
| Hin6I | GCGC | 2 cut(s) | 1863, 2689 |
| HinP1I | GCGC | 2 cut(s) | 1863, 2689 |
| HincII | GTYRAC | 6 cut(s) | 16, 308, 869, 1291, 1471, 1951 |
| HindII | GTYRAC | 6 cut(s) | 16, 308, 869, 1291, 1471, 1951 |
| HindIII | AAGCTT | 2 cut(s) | 1485, 1832 |
| HpaI | GTTAAC | 1 cut(s) | 1471 |
| HpaII | CCGG | 5 cut(s) | 3512, 4346, 4778, 4873, 5591 |
| Hpy99I | CGWCG | 1 cut(s) | 2614 |
| HpyCH4IV | ACGT | 2 cut(s) | 1425, 3945 |
| HpySE526I | ACGT | 2 cut(s) | 1425, 3945 |
| Hsp92I | GRCGYC | 1 cut(s) | 3845 |
| HspAI | GCGC | 2 cut(s) | 1863, 2689 |
| Kpn2I | TCCGGA | 1 cut(s) | 4345 |
| Ksp22I | TGATCA | 3 cut(s) | 214, 2803, 2956 |
| KspAI | GTTAAC | 1 cut(s) | 1471 |
| LguI | GCTCTTC | 2 cut(s) | 4083, 5023 |
| MaeII | ACGT | 2 cut(s) | 1425, 3945 |
| MfeI | CAATTG | 2 cut(s) | 3051, 5156 |
| MhlI | GDGCHC | 7 cut(s) | 3338, 3535, 4078, 4266, 5275, 5606, 5704 |
| MlsI | TGGCCA | 2 cut(s) | 4338, 4407 |
| MluNI | TGGCCA | 2 cut(s) | 4338, 4407 |
| MlyI | GAGTC | 9 cut(s) | 281, 457, 482, 488, 1127, 1387, 1618, 3646, 4810 |
| MmeI | TCCRAC | 4 cut(s) | 1527, 2014, 2699, 5436 |
| Mox20I | TGGCCA | 2 cut(s) | 4338, 4407 |
| Mph1103I | ATGCAT | 2 cut(s) | 408, 1566 |
| MroI | TCCGGA | 1 cut(s) | 4345 |
| MroXI | GAANNNNTTC | 1 cut(s) | 4189 |
| MscI | TGGCCA | 2 cut(s) | 4338, 4407 |
| MslI | CAYNNNNRTG | 5 cut(s) | 576, 2633, 3033, 3810, 4160 |
| Msp20I | TGGCCA | 2 cut(s) | 4338, 4407 |
| MspA1I | CMGCKG | 4 cut(s) | 1970, 2971, 4978, 5425 |
| MspI | CCGG | 5 cut(s) | 3512, 4346, 4778, 4873, 5591 |
| MunI | CAATTG | 2 cut(s) | 3051, 5156 |
| Mva1269I | GAATGC | 3 cut(s) | 1417, 3516, 4014 |
| MvnI | CGCG | 3 cut(s) | 1863, 4311, 4611 |
| NciI | CCSGG | 2 cut(s) | 3513, 4778 |
| NcoI | CCATGG | 3 cut(s) | 3284, 3840, 4861 |
| NdeI | CATATG | 5 cut(s) | 508, 2455, 2575, 2887, 4323 |
| NmeAIII | GCCGAG | 2 cut(s) | 80, 470 |
| NmuCI | GTSAC | 5 cut(s) | 235, 1166, 1445, 3422, 3846 |
| NruI | TCGCGA | 1 cut(s) | 4311 |
| NsbI | TGCGCA | 1 cut(s) | 2690 |
| NsiI | ATGCAT | 2 cut(s) | 408, 1566 |
| NspI | RCATGY | 5 cut(s) | 1174, 2392, 2689, 4159, 5667 |
| PaeI | GCATGC | 3 cut(s) | 2392, 2689, 4159 |
| PagI | TCATGA | 1 cut(s) | 1930 |
| PaqCI | CACCTGC | 1 cut(s) | 2233 |
| PasI | CCCWGGG | 1 cut(s) | 1540 |
| PceI | AGGCCT | 1 cut(s) | 2647 |
| PciI | ACATGT | 1 cut(s) | 1170 |
| PciSI | GCTCTTC | 2 cut(s) | 4083, 5023 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4099 |
| PctI | GAATGC | 3 cut(s) | 1417, 3516, 4014 |
| PdmI | GAANNNNTTC | 1 cut(s) | 4189 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 3140, 3275, 4427, 4862 |
| PfoI | TCCNGGA | 2 cut(s) | 4081, 5116 |
| PleI | GAGTC | 9 cut(s) | 281, 457, 482, 487, 1126, 1386, 1618, 3645, 4810 |
| PpsI | GAGTC | 9 cut(s) | 281, 457, 482, 487, 1126, 1386, 1618, 3645, 4810 |
| PpuMI | RGGWCCY | 2 cut(s) | 1544, 2201 |
| PscI | ACATGT | 1 cut(s) | 1170 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1377 |
| Psp124BI | GAGCTC | 1 cut(s) | 4078 |
| Psp1406I | AACGTT | 1 cut(s) | 1425 |
| Psp5II | RGGWCCY | 2 cut(s) | 1544, 2201 |
| PspFI | CCCAGC | 2 cut(s) | 3260, 4830 |
| PspOMI | GGGCCC | 1 cut(s) | 3334 |
| PspPPI | RGGWCCY | 2 cut(s) | 1544, 2201 |
| PstI | CTGCAG | 3 cut(s) | 1609, 5430, 5502 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1466, 1613, 3275, 4088, 5425 |
| PvuII | CAGCTG | 3 cut(s) | 1970, 2971, 5425 |
| RruI | TCGCGA | 1 cut(s) | 4311 |
| RsaI | GTAC | 4 cut(s) | 1177, 1263, 2812, 3324 |
| RsaNI | GTAC | 4 cut(s) | 1176, 1262, 2811, 3323 |
| RseI | CAYNNNNRTG | 5 cut(s) | 576, 2633, 3033, 3810, 4160 |
| SacI | GAGCTC | 1 cut(s) | 4078 |
| SalI | GTCGAC | 1 cut(s) | 306 |
| SapI | GCTCTTC | 2 cut(s) | 4083, 5023 |
| ScaI | AGTACT | 1 cut(s) | 2812 |
| SchI | GAGTC | 9 cut(s) | 281, 457, 482, 488, 1127, 1387, 1618, 3646, 4810 |
| SduI | GDGCHC | 7 cut(s) | 3338, 3535, 4078, 4266, 5275, 5606, 5704 |
| SfcI | CTRYAG | 4 cut(s) | 1605, 2335, 5426, 5498 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 576, 2633, 3033, 3810, 4160 |
| SmlI | CTYRAG | 8 cut(s) | 137, 962, 1548, 1781, 2067, 5132, 5556, 5681 |
| SmoI | CTYRAG | 8 cut(s) | 137, 962, 1548, 1781, 2067, 5132, 5556, 5681 |
| SpeI | ACTAGT | 1 cut(s) | 1136 |
| SphI | GCATGC | 3 cut(s) | 2392, 2689, 4159 |
| SseBI | AGGCCT | 1 cut(s) | 2647 |
| SspI | AATATT | 2 cut(s) | 1207, 3432 |
| SstI | GAGCTC | 1 cut(s) | 4078 |
| StuI | AGGCCT | 1 cut(s) | 2647 |
| StyI | CCWWGG | 7 cut(s) | 474, 3284, 3787, 3840, 4408, 4811, 4861 |
| TaiI | ACGT | 2 cut(s) | 1428, 3948 |
| TatI | WGTACW | 3 cut(s) | 1175, 2810, 3322 |
| TauI | GCSGC | 5 cut(s) | 1254, 4333, 4708, 4981, 5434 |
| TseFI | GTSAC | 5 cut(s) | 235, 1166, 1445, 3422, 3846 |
| Tsp45I | GTSAC | 5 cut(s) | 235, 1166, 1445, 3422, 3846 |
| TspGWI | ACGGA | 4 cut(s) | 491, 946, 3247, 5154 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 3140, 3275, 4427, 4862 |
| VneI | GTGCAC | 2 cut(s) | 4262, 5271 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1940, 1982 |
| XapI | RAATTY | 6 cut(s) | 131, 397, 2241, 3197, 5518, 5670 |
| XbaI | TCTAGA | 1 cut(s) | 3106 |
| XceI | RCATGY | 5 cut(s) | 1174, 2392, 2689, 4159, 5667 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2095 |
| XmiI | GTMKAC | 3 cut(s) | 200, 307, 1650 |
| XmnI | GAANNNNTTC | 1 cut(s) | 4189 |
| ZrmI | AGTACT | 1 cut(s) | 2812 |
| Zsp2I | ATGCAT | 2 cut(s) | 408, 1566 |