Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002955

Physical Location & Seq

Genomic Coordinates Reverse (-)

9085720 .. 9096689

Gene Structure 10970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G24880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5874 bp

ATGCATGGAAGCGTTTCAGGATATCTTCTAGTAAATGCTGAGGTTGATTCCATGGGAGGAGTTATCGATAGTGGAGGTGGTATTGGTGTTAAAACATCTCCGCGCCGAACAGCTATTGAGAAGGCTCAAGCGGAGCTAAGGCAAGAGTATGATGTTCGTGAGGAAAGGAGGAGAGAATTGGAGTTTCTAGAGAAAGGCGGTAATCCCTTGGATTTCAAGTTTGGTATTGCAACTTCACATAGCGTCCAATCTACATCACTCACAGATCAGCAAGCAGAGCATTTTGTAAACAGTGAAGTCAAAGATAGTTTTGCCCTGACTGCCTCACCACATGGTGACTCGGTGGAGAGTAGCGGTAGACCTGGAGTTCCTACAATTTCTGAACCCAATACAGCAGATAATCTTTTACTGTTTGATTCTGAAAACAAGTCAGTTGAAGGGGAAAGAAATTTGAGACATCCTAATAGGCAAAACAGAACTTCTGAGTCAGAACGATCTTCCAAAGCACACACCAACCAGAATACCAAAGAAACAGAAGATTCTGCCATCTTTCGCCCGTATGCTCGGAGGAACAGATCGAAGATAAGTCGGGATCCAGCACGGTCAAGCTCTACGGATTTAGTTCAGAATCGTGGTGGTCTTGCAACGTCTATATCTATTCGCAGAGGATCAGTGGAAGGAAAGGGTTGCATTCCCGAAGCAGCCAATCAAAAGGATATGCATACAACTTCTGTATCTTGTCCAGTATTTGCAAATTCAAATGGTAATATCGTTCCGAAAAATAGAGTTTCCAGCAATTCGCTGAATACTAAGGTGGATGGTGAACCTGTTGTACGAGAGAGTACTGCTGGATCCAAGACTAGTCTATTGAAAGATGAAGCCGACATTTCGTATAGTAAAAGCTCTGCATATTTGCCAGTTGGAGAGTCTGGCCTTGCTGGGGAGAAGGCACAACTAGTTTCGACTGGTGGTTCTCCCAAAGCTGCAACAATAGCTGGCCAGAAAAATAGTTCTACCCAACTGAATGGCCTAAGAGATTCCACGGTAGAGGAAGAAAGCTTAACAAATAGAGGAGCTACAGGGACTAATGGGTTAGAGTCAGAGTCTTCTCATGCGAACAACGTAGAAGTAAATGTAGATAATGAAAGAGATCTTTATAAAGTGGACAAACTTGACTCTGATGAAATCTCTATGCAGAAGACTTTGAGAGTAGAGGGGTTACTAGATCAAACAGTTGGTGAAATGACCAAAACTAAGATTGAAGATGAGACAGGTCAATCTACCACCATTATCAGTGAGTGCATTCCTGAATGTGAAATGCAGATGAAATCGGTTAAAATTGAAAATCAAAGTCACAGAAGTACAGCTGAGATGCAAACTAAGGAGAAAAGTTCCGAGACTGAGAAAAGGCTTCAAGATGGGTTGGTTGTACTCGAAAATGACAGTAAAGTTGGTAGTATTTTATCTGAAAATCCTAGCAGCACGTTGTGCTCTGGAATTCCTCAGGCATCTGTAGACACAAGTTCTTGCACAGTTGGCAATAGTTTATTGTCAGGAACTGACATTGAAGCATTAAAACATCAGCCGAGCTCAGATGCAGTTATGTTAGATACTGTCAAGGAGGACGCTATTCTTGAGGAGGCCCGGATTATACAGGCAAAGAAAAAAAGAATTGCCGAATTATCTTGTGGTACTGCACCAGTGGAGGTCCGTGAGAAATCTCAATGGGATTTTGTCCTCGAAGAAATGGCATGGCTGGCAAATGATTTTGCGCAGGAGCGCCTTTGGAAAATGACTGCTGCCGCACAAATTTGCCATCGAGTTGCTTTGACTTGTCAGTTGAGATTTGAGGAACGAAATCAGCACAGAAAGCTGAAAAAAATAGCTTCAGTCCTATCTAATGCTATCTTACAATTCTGGAGTTCTGTGGAGGCCGAGGTTCCTGGGGAGCTGGAGGAGACGAGCTTGGGAATTGTTAAGGAGACTTGCCAAGAATCTAATTGTTTGAATGGCAGAAGATGTTTAGCTGCGGGTGTCAAGGAATATGCAAGTAGATTTTTGAAGTACAACAACTCTTCCATCTCCTATCATTCAGCTGCACCGTCAACACCTGACAATATGTGCGACCCAGAAATATTGGATATATCTATGGTTGATCAGCTTACAGAAGCAAGCCTCTTTTATTCAGTTCCATCTGGTGCAATGGAGGTGTACCTTAAGTCCATTGAGTCGCATCTTACACGTTGTGAGAAGTCTGGAAGTAGCATGCAGGAGGAGGTTGATACATCAGCCTATGATACTGCTGGAGATATAGGATATAATGTTACTGCGTTCGATGAGGATGAAGGAGAAACAAGTACCTATTATCTTCCGGGAGCTTTCGAGTCTAGCAGATCATTTAATATAAGCCACAAAAAAAGGAAGAATCTGATGAAGTCTCATTCTGCCCGGTCATATGATCTTGGGGACGATTTACCATACGTCAACAACACAGGTGGCTCTAACTCATCAAGTTTGATGGCAAAAAGGCCTGACAGTAATATTAATGCCGGCTCAGTTCCAACAAGGCGAGTGCGCACTGCTTCCAGGCAGAGGGTTGTGAGTCCTTTTGGGTGTGCTACTACTGGGAATTTACCAGTGCCCTCGAAGACAGATGCGTCTAGTGGGGATACTAGTTCTTTCCAGGATGAGTATAGTAGTTTGCATGGTGGATCGGCAGTCCAAAAAGGCACAGAGGTTGAGTCAAGTGTTAACTTTGAAAAGCTGTTACCTTATGACATGGCTGAAACCTCAGGAAGACCTAAAAAGAAAAAGAAGACTCATCAGGGCTCCGCATATGACCAAACTTGGCATCTCGATCCGTCAGTCCATGTTGAACAGAAGGACCACTGGAAGAAGCGACCAGAGAATAATTTCGATATGAATGGTCTGTATGGTCCTCATAGTGCAAAGAAGCAAAAGACCACCAAGCAATTGGTAGAGAATAATTTTGATATGGCTATTCCTCACACTGGATCGATTCCTTCTCCGGCTGCTTCCCAGATGAGCAATATGTCCAACCCCAACAAATCTATCAAATTTATTGGAGGTCGTGATAGGGGCAGAAAAATAAAAGGCCTGAAGATTTCTCCTGGTCAGCATGGTTCTGGAAATCCATGGTCACTATTTGAGGATCAGGCGCTTGTTGTCCTGGTGCATGATATGGGCCCTAACTGGGAGCTCATTAGTGATGCAATGAACAGCACTCTTAAAATTAAGTGTATATATCGCAATCCGACTGAGTGCAAGGACCGGCATAAGATTCTGATGGATAAAACTGCTGGTGATGGGGCTGATAGTGCAGAAGATTCAGGGAATTCTCAGTCTTATCCATCCACTTTGCCTGGCATCCCAAAGGGAAGTGCGAGACAGTTGTTTCAACGACTGCAAGGGCCAATGGAGGAAGATACCCTGAAGTCTCATTTTGAGAAGATTTGTTTGATTGGGAAGAAATTACATTATAGAAAGACACAGAGTGTTATCGGGGTTTCTGTGGTTTCTTTTGTTCACGGAATTCAGTTTTCAAGTTGCACTGGAGCTGGCATATCTCAATCACTCGACATACCAGGTCTGCATGTTTCTAAGTATAGCTGCAAATCTTGGCTAGGATTTCCTGAAAATGATGGTCGGGATTCCAAGCAAATAGTACCAGTTCACAATTCACAAGTCATGGCTCTCTCTCAAGTATTCCCGAATAATCTGAATGGAGGTGTTCTTACGCCCCTTGATGTCTGTGACGCATCAACTTCAGGTCAAGATGTATTTTCACTTGAAAATCCAGGTCTTCCAATGTTGAATCAGGGAACGCCAGTGCTCCCTACTTCTGGAGCACATCCATCCACTCCTGGATCATCTGGTGTTGTTCTGAGCAACAATTTGCCAACCACATCTGGCCTACAGAGTGCTTCTGTCAGGGATGGTAGATTCAATGTTCCTAGAGGGTCTTTGCCACTTGATGAACAACACCGACTACAACAATTTAATCAAACGTTATCTGGTAGAAACCTGCAGCAGCCCTCCTTATCAACTCCTGCAGCTGTCTCAGGATCTGATCGTGGACATCGCATGGTTCCTGGTGGAAATGCTATGGGTGTAAGTGGAATGAACAGGAACACACCCATGTCAAGGCCTGGTTTTCAAGGGATGGCCTCATCAGCAATGCCAAATACTGGTAGTATGCTTTCCTCTGGCATGGTAGAAATTCCAAACACTGGAAATATTCATTCCGGAGGAGGAGCTTCTCAAGGAAACTCCATGATCAGGCCTCGTGAAGCTGTGCAGCATATGATGCGGATGCAGGCTGCTCAAGGGAACAGTCCGGGGATCCCAGCTTTCAGTAATTTGAGTTCTGGATTTACCAACCAGACAACTCCTGTTCAGGCGTACCCAGGCCATCTTTCCCAGCAGCATCAGATGTCACCGCAGTCACATGTGCTTGGCAACTCGCATCATCCTCATCTCCAGAGCCCAAGTCAAGCCACTGGGGCACAGCAAGAAGCATTTGCTATCCGTCAAAGACAAATTCACCAGAGGTATTTGCAGCAACAGCAACAGCAACAGCAGTTTCCAGCATCTGGTTCTATGATGCCACATGTACAACAACCTCAGGGCTCTTCTGTTTCTTCTTCTCCACAAAACAGTCCTCAGACTCAACCACCTGTTTCGCCCCAGCCATTATCCATGCCCCCGGTGTCGCCCTCTCCTAATATTAATGCTATGGCACAACAGAAACCTCAAAAATCTCAGTTGGCGCTTCATGGTTTGGGTAGGAGTCCTCAGTCTGGTACTTCTGGAGTGAACAATCAAGCTGGAAAACAAAGGCAGCGACAACTTCAGCAGTCTGCAAGACAGCATCCACACCAGCGGCAGCCAACACAAGGTCAACAGCTGAATAAACAACTGAAGGGGATGGGTAGAGGCAACATGATCCATCAGAACATCACTGTTGATCAGTCACACCTGAATGGCCTTACCATGCCCCAAGGAAACCAGGCTACTGAAAAAGGAGAGATAGCGGTTCCAGTTAGGCCTGATCAGCAGTCTAGTGTGGGGACTACCACGAGCACGAATCTGCAGTCTAAACCATTTGTTTCTCCCTTGTCTTCAAATCATTCACAGCAACTGCCAAAATCATTCCCTGGTGCTTTGCCTCCATCCCCTCAACAACAGATGCAATTACATTCAGACAATAGCATCCAAGGCCAGAGCTCACCTGCGACCCCATGTAATATTTTATCCACCTCTAGCCCGTCAATTGCACCAGCGGTTGCACCTTCTAACCATCAGCATTTGTTGATACACCAAAAGCAGCGCAATCAAGTGCAATCAACAGCTCAGCGAGTTGTTCAACATAATCATCTAGGGAACTCTGAGTTATCAAAGAAGTCCCAAGCTGAACGCATGCCACGTGTTCCACAGTCTGTAACCAATACTACCCAAACTGTTAGTATGGGTACGACCAAGGGTATGCCTCAAGCGAGTAATGATTTGAAAAACATAAAAGCAGTTGGTTCTACTGCGGTGCCTGCTTTGGAACCTCCATCTTGTGTTGCTTCTGTGCAAATCACTGCTTCGAAAGTAGTAAACAGTTCCAATACAGATTCAGCAGGAAATGATCCAGTATCAACACCGAACCAAGGACTAGCTCAAAAGCACGGGATCAAGGGCGTTACACAGAGACAACAACAGTCTCTACCTTCAGAAGAAAAGAGACCGAAATTGCCAGAGAAGCCGACTGTACAAAATCAGAAACACCTTGCTTCTGAGGAGCAGCCTCATTTAGAAGAAGCACAAGAATTATCATCTTCCAAGCCTCCTGATACAAAAGTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009909 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032991 GO:0035267 GO:0036211 GO:0040034 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048046 GO:0048506 GO:0048509 GO:0048510 GO:0048580 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0051239 GO:0051276 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1990234 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSA Myb_DNA-bind_6

Protein Analysis

1957

Amino Acids

211.66

Weight (kDa)

7.64

Isoelectric Point (pI)

56.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSA	PF07529	570 - 609	2.1e-07	HSA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24870 AT3G24870 AT3G24870 AT3G24870 AT3G24880 AT3G24880 AT3G24880
fragaria_vesca	FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860
malus_domestica	MD05G1174400.v1.1 MD10G1163500.v1.1
prunus_persica	Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1
pyrus_communis	pycom05g16120 pycom10g14100
rosa_chinensis	RchiOBHm_Chr6g0284671
rosa_laevigata	RLG00000012732
rosa_multiflora	Rmu_co8337863.1_g000001 Rmu_sc0007474.1_g000006
rosa_roxburghii	Rroxscaffold_7G00184490
rosa_rugosa	Rorug06G0165200 Rorug06G0165200 Rorug06G0165300 Rorug06G0165400
rosa_samantha	Rh6AG278300 Rh6BG278300 Rh6CG280600 Rh6DG273300
rosa_wichuraiana	Rw6G023920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1158
AarI	CACCTGC	1 cut(s)	5260
AasI	GACNNNNNNGTC	1 cut(s)	2656
Acc16I	TGCGCA	2 cut(s)	1773, 2576
Acc36I	ACCTGC	2 cut(s)	4053, 5260
AccB1I	GGYRCC	1 cut(s)	5560
AccB7I	CCANNNNNTGG	3 cut(s)	4208, 4250, 4613
AccI	GTMKAC	2 cut(s)	358, 1515
AccII	CGCG	1 cut(s)	103
AccIII	TCCGGA	1 cut(s)	4265
AclI	AACGTT	1 cut(s)	4028
AcoI	YGGCCR	1 cut(s)	997
AcuI	CTGAAG	7 cut(s)	1872, 3140, 3473, 3771, 4856, 4961, 5721
AcvI	CACGTG	1 cut(s)	5447
AdeI	CACNNNGTG	4 cut(s)	335, 1488, 2246, 3515
AflII	CTTAAG	1 cut(s)	2216
AflIII	ACRYGT	4 cut(s)	2240, 4468, 4630, 5446
AhlI	ACTAGT	3 cut(s)	860, 955, 2672
Alw21I	GWGCWC	7 cut(s)	1493, 1592, 3222, 3855, 3871, 5105, 5249
AlwNI	CAGNNNCTG	4 cut(s)	1559, 4088, 4613, 5161
Aor13HI	TCCGGA	1 cut(s)	4265
ApaI	GGGCCC	1 cut(s)	3209
ArsI	GACNNNNNNTTYG	2 cut(s)	5099, 5131
AseI	ATTAAT	2 cut(s)	2544, 4749
Asp700I	GAANNNNTTC	2 cut(s)	13, 2912
AspLEI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4792, 5352
AspS9I	GGNCC	8 cut(s)	1642, 1708, 2884, 2936, 3205, 3206, 3289, 3431
AsuC2I	CCSGG	5 cut(s)	1645, 2373, 2449, 4359, 4727
AsuHPI	GGTGA	8 cut(s)	318, 347, 833, 1250, 3335, 4449, 4556, 5241
AsuII	TTCGAA	1 cut(s)	5612
AvaII	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
AxyI	CCTNAGG	3 cut(s)	1503, 2791, 4644
BaeGI	GKGCMC	3 cut(s)	2643, 3209, 4528
BaeI	ACNNNNGTAYC	3 cut(s)	717, 750, 5850
BalI	TGGCCA	1 cut(s)	999
BamHI	GGATCC	3 cut(s)	592, 851, 4362
BanI	GGYRCC	1 cut(s)	5560
BanII	GRGCYC	7 cut(s)	1592, 2831, 3209, 3222, 4508, 4652, 5249
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
BauI	CACGAG	2 cut(s)	4305, 5098
BbrPI	CACGTG	1 cut(s)	5447
BbsI	GAAGAC	7 cut(s)	1098, 1205, 2654, 2803, 2822, 3815, 5133
Bbv12I	GWGCWC	7 cut(s)	1493, 1592, 3222, 3855, 3871, 5105, 5249
BbvCI	CCTCAGC	1 cut(s)	39
BciVI	GTATCC	1 cut(s)	2662
BclI	TGATCA	4 cut(s)	2155, 4296, 4987, 5071
BcnI	CCSGG	5 cut(s)	1645, 2373, 2449, 4359, 4727
BcuI	ACTAGT	3 cut(s)	860, 955, 2672
BfmI	CTRYAG	6 cut(s)	1077, 1512, 3935, 4046, 4071, 5111
BfoI	RGCGCY	3 cut(s)	1783, 3182, 4793
BfrI	CTTAAG	1 cut(s)	2216
BfuAI	ACCTGC	2 cut(s)	4053, 5260
BfuI	GTATCC	1 cut(s)	2662
BglI	GCCNNNNNGGC	1 cut(s)	4523
BglII	AGATCT	1 cut(s)	1150
BlpI	GCTNAGC	1 cut(s)	5373
BmcAI	AGTACT	1 cut(s)	844
Bme18I	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
BmgT120I	GGNCC	8 cut(s)	1642, 1708, 2884, 2936, 3205, 3206, 3289, 3431
BmrI	ACTGGG	3 cut(s)	2634, 3223, 4530
BmuI	ACTGGG	3 cut(s)	2634, 3223, 4530
BpiI	GAAGAC	7 cut(s)	1098, 1205, 2654, 2803, 2822, 3815, 5133
BpmI	CTGGAG	8 cut(s)	384, 1939, 1973, 2325, 3594, 3885, 4484, 4851
Bpu10I	CCTNAGC	2 cut(s)	39, 137
Bpu1102I	GCTNAGC	1 cut(s)	5373
Bpu14I	TTCGAA	1 cut(s)	5612
BpuEI	CTTGAG	6 cut(s)	111, 1655, 3705, 4266, 4329, 5496
BpuMI	CCSGG	5 cut(s)	1645, 2373, 2449, 4359, 4727
Bsa29I	ATCGAT	2 cut(s)	66, 3017
BsaAI	YACGTR	1 cut(s)	5447
BsaI	GGTCTC	1 cut(s)	5743
BsaWI	WCCGGW	1 cut(s)	4265
Bse118I	RCCGGY	2 cut(s)	2549, 3291
Bse21I	CCTNAGG	3 cut(s)	1503, 2791, 4644
Bse3DI	GCAATG	3 cut(s)	2208, 3240, 4203
BseAI	TCCGGA	1 cut(s)	4265
BseCI	ATCGAT	2 cut(s)	66, 3017
BseMI	GCAATG	3 cut(s)	2208, 3240, 4203
BseRI	GAGGAG	9 cut(s)	72, 184, 1086, 1652, 1970, 2288, 4284, 4287, 5819
BseSI	GKGCMC	3 cut(s)	2643, 3209, 4528
BseYI	CCCAGC	4 cut(s)	938, 4366, 4440, 4707
BsgI	GTGCAG	4 cut(s)	1680, 2082, 3360, 4337
Bsh1236I	CGCG	1 cut(s)	103
BshNI	GGYRCC	1 cut(s)	5560
BshVI	ATCGAT	2 cut(s)	66, 3017
BsiHKAI	GWGCWC	7 cut(s)	1493, 1592, 3222, 3855, 3871, 5105, 5249
BsiSI	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4266, 4358, 4727
BslFI	GGGAC	4 cut(s)	1096, 2480, 5104, 5410
BsmBI	CGTCTC	1 cut(s)	1952
BsmFI	GGGAC	4 cut(s)	1096, 2480, 5104, 5410
BsmI	GAATGC	2 cut(s)	690, 1302
Bso31I	GGTCTC	1 cut(s)	5743
Bsp119I	TTCGAA	1 cut(s)	5612
Bsp120I	GGGCCC	1 cut(s)	3205
Bsp13I	TCCGGA	1 cut(s)	4265
Bsp1407I	TGTACA	2 cut(s)	4633, 5776
Bsp1720I	GCTNAGC	1 cut(s)	5373
Bsp19I	CCATGG	2 cut(s)	51, 3155
BspDI	ATCGAT	2 cut(s)	66, 3017
BspEI	TCCGGA	1 cut(s)	4265
BspFNI	CGCG	1 cut(s)	103
BspMAI	CTGCAG	3 cut(s)	4050, 4075, 5115
BspMI	ACCTGC	2 cut(s)	4053, 5260
BspQI	GCTCTTC	1 cut(s)	4657
BspT104I	TTCGAA	1 cut(s)	5612
BspT107I	GGYRCC	1 cut(s)	5560
BspTI	CTTAAG	1 cut(s)	2216
BspTNI	GGTCTC	1 cut(s)	5743
BsrDI	GCAATG	3 cut(s)	2208, 3240, 4203
BsrFI	RCCGGY	2 cut(s)	2549, 3291
BsrGI	TGTACA	2 cut(s)	4633, 5776
BssAI	RCCGGY	2 cut(s)	2549, 3291
BssSI	CACGAG	2 cut(s)	4305, 5098
BssT1I	CCWWGG	7 cut(s)	51, 207, 3155, 5020, 5236, 5499, 5674
Bst2BI	CACGAG	2 cut(s)	4305, 5098
Bst6I	CTCTTC	2 cut(s)	2080, 4657
BstAFI	CTTAAG	1 cut(s)	2216
BstAPI	GCANNNNNTGC	2 cut(s)	1488, 4327
BstAUI	TGTACA	2 cut(s)	4633, 5776
BstBAI	YACGTR	1 cut(s)	5447
BstBI	TTCGAA	1 cut(s)	5612
BstDSI	CCRYGG	3 cut(s)	51, 1041, 3155
BstFNI	CGCG	1 cut(s)	103
BstH2I	RGCGCY	3 cut(s)	1783, 3182, 4793
BstHHI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4792, 5352
BstNSI	RCATGY	5 cut(s)	2269, 3617, 4472, 4634, 5443
BstSFI	CTRYAG	6 cut(s)	1077, 1512, 3935, 4046, 4071, 5111
BstSLI	GKGCMC	3 cut(s)	2643, 3209, 4528
BstUI	CGCG	1 cut(s)	103
BstV2I	GAAGAC	7 cut(s)	1098, 1205, 2654, 2803, 2822, 3815, 5133
BstX2I	RGATCY	5 cut(s)	592, 851, 1150, 4085, 4362
BstXI	CCANNNNNNTGG	2 cut(s)	1025, 2974
BstYI	RGATCY	5 cut(s)	592, 851, 1150, 4085, 4362
Bsu15I	ATCGAT	2 cut(s)	66, 3017
Bsu36I	CCTNAGG	3 cut(s)	1503, 2791, 4644
BsuI	GTATCC	1 cut(s)	2662
BsuTUI	ATCGAT	2 cut(s)	66, 3017
BtgI	CCRYGG	3 cut(s)	51, 1041, 3155
BtgZI	GCGATG	1 cut(s)	4085
BtsI	GCAGTG	2 cut(s)	2577, 5604
BveI	ACCTGC	2 cut(s)	4053, 5260
CaiI	CAGNNNCTG	4 cut(s)	1559, 4088, 4613, 5161
CfoI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4792, 5352
Cfr10I	RCCGGY	2 cut(s)	2549, 3291
Cfr13I	GGNCC	8 cut(s)	1642, 1708, 2884, 2936, 3205, 3206, 3289, 3431
ClaI	ATCGAT	2 cut(s)	66, 3017
CseI	GACGC	4 cut(s)	232, 1634, 2646, 3785
CsiI	ACCWGGT	1 cut(s)	3604
CspCI	CAANNNNNGTGG	2 cut(s)	2476, 2511
DraIII	CACNNNGTG	4 cut(s)	335, 1488, 2246, 3515
DrdI	GACNNNNNNGTC	1 cut(s)	2656
DseDI	GACNNNNNNGTC	1 cut(s)	2656
EaeI	YGGCCR	1 cut(s)	997
Eam1104I	CTCTTC	2 cut(s)	2080, 4657
EarI	CTCTTC	2 cut(s)	2080, 4657
Ecl136II	GAGCTC	3 cut(s)	1590, 3220, 5247
Eco130I	CCWWGG	7 cut(s)	51, 207, 3155, 5020, 5236, 5499, 5674
Eco147I	AGGCCT	5 cut(s)	2530, 3117, 4168, 4303, 5068
Eco24I	GRGCYC	7 cut(s)	1592, 2831, 3209, 3222, 4508, 4652, 5249
Eco31I	GGTCTC	1 cut(s)	5743
Eco32I	GATATC	1 cut(s)	23
Eco47I	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
Eco53kI	GAGCTC	3 cut(s)	1590, 3220, 5247
Eco57I	CTGAAG	7 cut(s)	1872, 3140, 3473, 3771, 4856, 4961, 5721
Eco72I	CACGTG	1 cut(s)	5447
Eco81I	CCTNAGG	3 cut(s)	1503, 2791, 4644
EcoICRI	GAGCTC	3 cut(s)	1590, 3220, 5247
EcoO109I	RGGNCCY	1 cut(s)	3206
EcoRI	GAATTC	3 cut(s)	1497, 3355, 3552
EcoRV	GATATC	1 cut(s)	23
EcoT14I	CCWWGG	7 cut(s)	51, 207, 3155, 5020, 5236, 5499, 5674
EcoT22I	ATGCAT	2 cut(s)	6, 723
EcoT38I	GRGCYC	7 cut(s)	1592, 2831, 3209, 3222, 4508, 4652, 5249
ErhI	CCWWGG	7 cut(s)	51, 207, 3155, 5020, 5236, 5499, 5674
Esp3I	CGTCTC	1 cut(s)	1952
FaqI	GGGAC	4 cut(s)	1096, 2480, 5104, 5410
FauI	CCCGC	1 cut(s)	2023
FauNDI	CATATG	3 cut(s)	2455, 2836, 4323
FbaI	TGATCA	4 cut(s)	2155, 4296, 4987, 5071
FblI	GTMKAC	2 cut(s)	358, 1515
FriOI	GRGCYC	7 cut(s)	1592, 2831, 3209, 3222, 4508, 4652, 5249
FspAI	RTGCGCAY	1 cut(s)	2576
FspI	TGCGCA	2 cut(s)	1773, 2576
GlaI	GCGC	7 cut(s)	104, 1773, 1781, 2576, 3180, 4791, 5351
GsaI	CCCAGC	4 cut(s)	942, 4370, 4444, 4711
GsuI	CTGGAG	8 cut(s)	384, 1939, 1973, 2325, 3594, 3885, 4484, 4851
HaeII	RGCGCY	3 cut(s)	1783, 3182, 4793
HapII	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4266, 4358, 4727
HgaI	GACGC	4 cut(s)	232, 1634, 2646, 3785
HhaI	GCGC	7 cut(s)	105, 1774, 1782, 2577, 3181, 4792, 5352
Hin6I	GCGC	7 cut(s)	103, 1772, 1780, 2575, 3179, 4790, 5350
HinP1I	GCGC	7 cut(s)	103, 1772, 1780, 2575, 3179, 4790, 5350
HincII	GTYRAC	4 cut(s)	2106, 2485, 2752, 4922
HindII	GTYRAC	4 cut(s)	2106, 2485, 2752, 4922
HindIII	AAGCTT	1 cut(s)	1057
HpaI	GTTAAC	1 cut(s)	2752
HpaII	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4266, 4358, 4727
HphI	GGTGA	8 cut(s)	318, 347, 833, 1250, 3335, 4449, 4556, 5241
HpyCH4IV	ACGT	7 cut(s)	647, 1122, 1484, 2242, 2481, 4028, 5446
HpySE526I	ACGT	7 cut(s)	647, 1122, 1484, 2242, 2481, 4028, 5446
HspAI	GCGC	7 cut(s)	103, 1772, 1780, 2575, 3179, 4790, 5350
Kpn2I	TCCGGA	1 cut(s)	4265
KroI	GCCGGC	1 cut(s)	2549
KroNI	GCCGGC	1 cut(s)	2551
Ksp22I	TGATCA	4 cut(s)	2155, 4296, 4987, 5071
KspAI	GTTAAC	1 cut(s)	2752
LguI	GCTCTTC	1 cut(s)	4657
MabI	ACCWGGT	1 cut(s)	3604
MaeII	ACGT	7 cut(s)	647, 1122, 1484, 2242, 2481, 4028, 5446
MfeI	CAATTG	2 cut(s)	2972, 5292
MflI	RGATCY	5 cut(s)	592, 851, 1150, 4085, 4362
MlsI	TGGCCA	1 cut(s)	999
MluNI	TGGCCA	1 cut(s)	999
MmeI	TCCRAC	4 cut(s)	901, 2585, 3081, 3299
Mox20I	TGGCCA	1 cut(s)	999
Mph1103I	ATGCAT	2 cut(s)	6, 723
MroI	TCCGGA	1 cut(s)	4265
MroNI	GCCGGC	1 cut(s)	2549
MroXI	GAANNNNTTC	2 cut(s)	13, 2912
MscI	TGGCCA	1 cut(s)	999
MslI	CAYNNNNRTG	2 cut(s)	4157, 5001
Msp20I	TGGCCA	1 cut(s)	999
MspA1I	CMGCKG	6 cut(s)	1367, 2096, 4076, 4903, 4927, 5303
MspCI	CTTAAG	1 cut(s)	2216
MspI	CCGG	9 cut(s)	1645, 2372, 2449, 2550, 3029, 3292, 4266, 4358, 4727
MunI	CAATTG	2 cut(s)	2972, 5292
Mva1269I	GAATGC	2 cut(s)	690, 1302
MvnI	CGCG	1 cut(s)	103
NaeI	GCCGGC	1 cut(s)	2551
NciI	CCSGG	5 cut(s)	1645, 2373, 2449, 4359, 4727
NcoI	CCATGG	2 cut(s)	51, 3155
NdeI	CATATG	3 cut(s)	2455, 2836, 4323
NgoMIV	GCCGGC	1 cut(s)	2549
NmeAIII	GCCGAG	2 cut(s)	1611, 1960
NmuCI	GTSAC	7 cut(s)	335, 1352, 3159, 3773, 4455, 4464, 4992
NsbI	TGCGCA	2 cut(s)	1773, 2576
NsiI	ATGCAT	2 cut(s)	6, 723
NspI	RCATGY	5 cut(s)	2269, 3617, 4472, 4634, 5443
NspV	TTCGAA	1 cut(s)	5612
PaeI	GCATGC	2 cut(s)	2269, 5443
PaqCI	CACCTGC	1 cut(s)	5260
PceI	AGGCCT	5 cut(s)	2530, 3117, 4168, 4303, 5068
PciI	ACATGT	2 cut(s)	4468, 4630
PciSI	GCTCTTC	1 cut(s)	4657
PcsI	WCGNNNNNNNCGW	1 cut(s)	5443
PctI	GAATGC	2 cut(s)	690, 1302
PdiI	GCCGGC	1 cut(s)	2551
PdmI	GAANNNNTTC	2 cut(s)	13, 2912
PflMI	CCANNNNNTGG	3 cut(s)	4208, 4250, 4613
PfoI	TCCNGGA	3 cut(s)	2371, 2682, 3883
PmaCI	CACGTG	1 cut(s)	5447
PmlI	CACGTG	1 cut(s)	5447
Ppu21I	YACGTR	1 cut(s)	5447
PscI	ACATGT	2 cut(s)	4468, 4630
PshBI	ATTAAT	2 cut(s)	2544, 4749
PsiI	TTATAA	1 cut(s)	1158
Psp124BI	GAGCTC	3 cut(s)	1592, 3222, 5249
Psp1406I	AACGTT	1 cut(s)	4028
PspCI	CACGTG	1 cut(s)	5447
PspFI	CCCAGC	4 cut(s)	938, 4366, 4440, 4707
PspOMI	GGGCCC	1 cut(s)	3205
PspPI	GGNCC	8 cut(s)	1642, 1708, 2884, 2936, 3205, 3206, 3289, 3431
PsrI	GAACNNNNNNTAC	4 cut(s)	816, 848, 4369, 4401
PstI	CTGCAG	3 cut(s)	4050, 4075, 5115
PstNI	CAGNNNCTG	4 cut(s)	1559, 4088, 4613, 5161
PsuI	RGATCY	5 cut(s)	592, 851, 1150, 4085, 4362
PvuII	CAGCTG	4 cut(s)	1367, 2096, 4076, 4927
RseI	CAYNNNNRTG	2 cut(s)	4157, 5001
SacI	GAGCTC	3 cut(s)	1592, 3222, 5249
SapI	GCTCTTC	1 cut(s)	4657
Sau96I	GGNCC	8 cut(s)	1642, 1708, 2884, 2936, 3205, 3206, 3289, 3431
ScaI	AGTACT	1 cut(s)	844
SexAI	ACCWGGT	1 cut(s)	3604
SfcI	CTRYAG	6 cut(s)	1077, 1512, 3935, 4046, 4071, 5111
SfuI	TTCGAA	1 cut(s)	5612
SinI	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
SmiMI	CAYNNNNRTG	2 cut(s)	4157, 5001
SmlI	CTYRAG	7 cut(s)	126, 1634, 2216, 3720, 4281, 4344, 5511
SmoI	CTYRAG	7 cut(s)	126, 1634, 2216, 3720, 4281, 4344, 5511
SpeI	ACTAGT	3 cut(s)	860, 955, 2672
SphI	GCATGC	2 cut(s)	2269, 5443
SseBI	AGGCCT	5 cut(s)	2530, 3117, 4168, 4303, 5068
SspI	AATATT	5 cut(s)	2136, 2542, 4258, 4747, 5269
SstI	GAGCTC	3 cut(s)	1592, 3222, 5249
StuI	AGGCCT	5 cut(s)	2530, 3117, 4168, 4303, 5068
StyI	CCWWGG	7 cut(s)	51, 207, 3155, 5020, 5236, 5499, 5674
TaiI	ACGT	7 cut(s)	650, 1125, 1487, 2245, 2484, 4031, 5449
TaqII	GACCGA	1 cut(s)	5767
TatI	WGTACW	6 cut(s)	842, 1361, 1429, 2064, 4633, 5776
TauI	GCSGC	2 cut(s)	1805, 4906
TseFI	GTSAC	7 cut(s)	335, 1352, 3159, 3773, 4455, 4464, 4992
Tsp45I	GTSAC	7 cut(s)	335, 1352, 3159, 3773, 4455, 4464, 4992
TspGWI	ACGGA	5 cut(s)	629, 1700, 2850, 3564, 4538
Van91I	CCANNNNNTGG	3 cut(s)	4208, 4250, 4613
Vha464I	CTTAAG	1 cut(s)	2216
VpaK11BI	GGWCC	4 cut(s)	1708, 2884, 2936, 3289
VspI	ATTAAT	2 cut(s)	2544, 4749
XbaI	TCTAGA	1 cut(s)	187
XceI	RCATGY	5 cut(s)	2269, 3617, 4472, 4634, 5443
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2971
XmiI	GTMKAC	2 cut(s)	358, 1515
XmnI	GAANNNNTTC	2 cut(s)	13, 2912
ZrmI	AGTACT	1 cut(s)	844
Zsp2I	ATGCAT	2 cut(s)	6, 723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.