Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0002955

Physical Location & Seq

Genomic Coordinates Forward (+)

16078297 .. 16092028

Gene Structure 13732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g18860.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5985 bp

ATGCATGGATATGACTCAGGATCTGCTCTCCTAGTAAATGCAGAGGTGGATTCCATGGGTGGAGTGGTTGACGGCGGAGTTGGTGTTGGTTTGAAAACATCTCCGCGCCGAGCAGCAATTGAGAAGGCTCAAGCAGAGCTTAGACAGGAATATGATGTGCGGGAGGAAAGAAGAAGGGAGCTAGAGTTTCTTGAGAAAGGTGGCAATCCTTTGGACTTCAAATTTGGAAATGCAGCTTCTGTTAGTGTCCAGTCTACTTCACTAACTGATCAGCATCCAGAACAGTTTGTGACCAGTGAAGCAAAAGGTAGTTTTGCATTGACTGCATCACCTCGTGGGGACTCTGTCGAAAGTAGTGGTCGACCAGAGGTTCCTACACTTTGTGAACCCAACAGTGCTGATAATCTATTACTATTTGATGGGGACAATGATACACCGGAAGGGGAAAGGAATTCTATGCATATTAGTAGAAGAAATAACATTGCTGCATCAGAACAATCTTCTCAGATGGATGGGACTCAAAATGCCAAGGAATCAGAAGACTCTGCAATTTTCCGTCCTTATGCTCGAAGGAACAGGTCCAGACCAAATCGTGATGGTACTCGTTCAAGTTCTACTGATATTCAGGGCCGTGGTGGTCAAGGGTCTTCATTACCTTCACGTGGGTCGTTAAAGAATCCCAAGGGACAGATATCTGAAACAATCAACCAAAAGGACCATAATCTACCTTTAGTCACTAATCTAAAGTCTGTGAAGTCTAATGGTGATTTTTCTCCTAAGCTTGCGACTTTTGACAGTCAGTTGGGTATGGAGTTTGATGGGGTACAGGCTCCTGAAATATATACTGGTCCGGCAAAAGGTAGCCCTGAAAGCAAATTGGATGTTACAGCTCCTGAAAGTTTGAAAGAGAGTCAACACACTCAACCATCTCAGACCGCTACTCAGGATATTCCAATTGCTGCGGTTTCTGGGAGATCTGATGAGAGGGAGCCATTAGCTTCATCTATTCATGAATATCTTCCTTGTGATGCTACTACAAAGACCGAAAACGATATTAGTTCTGTCCAGGTGAATGGATTTAGTAATCTAAATAGAGAGAGTAAAAGTGTACCAAATGAAGGTCATATTAGCAGTGCAGCGGGCACAAAGGGGTTAGATTCAGAATCTTCTTGTACCCAAACTAGTTTAGGATTAGATGTAAATAATGATACTGACATATGTACTACAAGGAATGATGATAATGCAAATATCATGGAAACATCAGATGTTGAAGGGTCACAAAATCCAGCTGGTGATGAAATGATGCTAGAAAAGAACGAAAGGAGAGCTGTTGACAGTAGTACCATGATTAATGATCCTCAAGCTTCTGCTTTTCATAGCAACCACTCTGGCAATTCTGAAGCCAAAGTTGAGGACGATATGAATGAAAGTAGATCAGAAGTGCGTAATGAAATAAAGCTTCATCCAAACACTGAGGGTGAGCAACAAAATGGTTGTATTGTATCAGAAGCTGAAAAGAAGCTTGATGAAGTGGTTGATAATGGTACCATCATCAAAAAAGAGAACTCTTCCGGCAGATCCCTGACTCAGGATTTATCTATGTGTGAGCTTCCTGAGACTGTTATGTCAGGGATAGACTCCACTAAGGGTTCAGACTGTCAGGCTTCTGATGATCACTTGAAAGTGGTAGACAAGGCACATGAAGACTCAATTTTGGAAGAGGCTCGGATGATAGAGGCTAAGCGTAAGAGGATTGCAGAATTATCCATTCGTTCTTTACCCTCGGAGATTCCCCGAAAGTCTCAGTGGGATTTTGTGCTTGAGGAAATGTCGTGGTTGGCCAACGATTTTGCGCAGGAGCGTCTATGGAAGCTAACTGCTGCTGCTCAGATTTGTCACCGTGTTGCTTTTACATCACGGTTGAGAATTGAAGAGAAACAACAACAATGGGGGTTAAAGAAAGTGGCTCATACCCTGGCAAATGCTGTCAACCAATTTTGGCATTCTGCTGAGACCCTCTTGAATAGTGATGATTCCAGTGATTGTATCATCAATGACAATTTGATATGGAGTAAAGAATCTAACAAAGAGTTGGAGCTACAATGGAGCAAAAACTTTTCAATTCCTATGCAGCGATATGCAGCGAGATTTTTGAAGTATAACGACTCTCTTGGTCCTCAACTTCAAGCACCGGCTCCTGCCACTCCTGAGAGATTGTCTGATTTAGGCATTACAGAAATGTCATGGGAGGACCATCTTACAGAAGAAAACCTCTTTTATGCAGTTTCCTCTGGTGCAATGGAAACATACAGAAGATCAATTGAATTTCATTTTATCCAGTGTGAGATGCAAGAGGAGGTTGAGACATCTAAGTATGATGCTGGAGCCGTCTCAGAGTTAAGTCAAGAGGCTCTATATGATGAGGATGAAGGAGAAACAAGCACCTATTATTTTCCTGGGGCCTTTGAAGGTAGCAAGTCATTGACATATAATCAGAAGAAGCGGAAGGGTTTTAAGTCTTCTAGGACATATGAAGCAGGAGCCGATTTGCCATATGGACCCTGTACGACAGCAAGTCAACAGTCCATGTTGATGGGGAAAAGGCCTGCTAGTCTTAATGTTGGTTCAATCCCAACAAAACGCACGCGCACTGCTTCCAGGCAGAGGGTTGTTAGTCCATTTGGTGCTGGAGCTACTGGGAATGTTCAGGCTCAAATTAAGACAGATGCTTCAAGTGGAGATACTAATTCTTATCAGGATGATCAGAGTACCTTGCACGGCGGATCCCAGTTCCAGAAAAGTATGGAGGTTGAATCTGTTGGTGAATTTGAAAGGCATCTACCATATGACCATGCAGAAACATCAATGAAGCCTAAAAAAAAGAAGAAGCAAAAACATCTGGGTTATGACCAAGGGTGGCAGTTGGATTCACCTACTCTTAATGAGCAGAGGGATTATTCAAAAAAGAGATCAGAAAGTCATCATTTTGAGTCCAATGGAACAATTGGTTTATACGGGCAACATAATGCGAAAAAGCCGAAGATATCAAAACAGTCTCTAGACAATACTTATGACGGGATGACTCCAATTACTGGGTCCCTTCCTTCTCCAGTGGCATCCCAAATGAGTAATATGACCAATCCGAGTAAATTAATTAAGTTGATCGGTGGTCGGGACAGGGGACGGAAAGCCAAATCACTGAAGATGCCTGTTGGGCAGCCAGGTTCTGGAAGTCCATGGTCACTATTTGAAGATCAGGCACTTGTTGTTCTTGTACATGATATGGGTCCAAATTGGGAACTCATAAGTGATGCTATCAACAGTACCCTGCACCTGAAGTGCATTTTCCGCAAGCCTAAGGAATGCAAGGAGCGTCACAAAATTCTAATGGATTTGAATACTGGTGATGGGGCTGACAGTGCTGAAGATTCAGGGTCATCTCAGCCTTATCCATCTACTATCCCTGGCATTCCGAAGGGAAGTGCCAGACAGTTATTTCAACGGTTGCAAGAGCCAATGGAAGAGGACACACTCAAGTCACATTTCGAAAGAATAATTAAGATTGGGCAGAAGCATCACTATAGGAGGAGTCAGAATGATAACCAGGATCCAAAACAAGTAACAACAGTCCACAATTCTCATGTTATCGCTCTTTCTCAAGTATGTCCAAATAACTTGAATGGAGGTAGTCTAACGCCTCTTGATCTATGTGATGCCACTTCAAGCCCAGATGTTCTTTCCTCTGCATATCAAGGTTCTCATGCTGGTGGCTTACCAATGGCAAATCAGGGTGCTATGGCGTCATTACTGCCCTCTGGGCCAAATGCCTCGTTACAGGGAACTTCTGGTATGGTTCTTGGCAGCAACTTGTCATCACCATCTGGCCCGCTTAGTGCGACAGTCAGGGACGGTAGGTACAGTGGTCCAAGGGCATCTGCTTTACCAGTTGAAGAGCAGCAAAGAATGCAACAGTATAATCAAATGTTATCTGGTAGAAACATTCAGCAGCCCAGCTTGTCTGTACCTGGGACTCTTCCAGGAACTGATCGTGGAGTTCGAATGGTACCAGGAGCAAATGGTATGGGCATGATGTGTGGAATGAATAGAAGCACAATGTCAAGGCCAGGGTTTCAGGGAATGGCTTCTTCCTCCATGCTGAATAGTGGGAGTATGCTTTCATCCAGTATGGTGGGGATACCAAGCCCTGTAAATATGCACTCTGGAGCTGGTTCTGGTCCAGGAAACTTAATGTTAAGACCTCGTGAGGGTCACATGATGCGGCCTGCCCATAATCCGGAGCATCAAAGGCAACTTATGGCTCCAGAGCTTCAGATGCAGGTAACACAAGGGAATGGCCAAGGTATTGCTCCATTCAATGGGTTGAGTTCTGGCTTTCCTAGCCAGACAACTTCATCAGGTGGACAAATGTATCCAGGCCATCCCCAGCAGCAACATCAGTTATCCCCACAACAATCCCATGCACTTGGTAGCCCTCATCACCCTCATCTTCAAGGCCCCAATCATGTGACAGGGGCGCAGCAAGCCTATGCCATGCGCATGGCTAAAGAAAGGCAGCTGCAACAACGGTTTTTGCAGCAGCAGCAACAGTTTGCAACATCCAATTCTTTGGTGCCGCATGTCCAACCACAGGCCCAACTCCCCATTTCTTCAAGTTTGCAAAATAGTTCCCAGATTCAGTCACAAAGTTCACCTCACCCAGCATCTATGTCCCCTAGTACACCGTCTTCCCCATTGACTCCCGTATCATCCCAGCACCAGCAGAAACATCATCTGCCACCTCATGGGATGAGTCGGAATCCTGGTGCAAGTGGATTGACTAATCAAACAGGGAAGCAACGACAAAGGCCTCAACAACACCATCTTCAGCAATCTGGGAGGCACCACCCTCAGCAGCGGCCATTTGGACAGTCTCAGCAGCAGGCTAAACTTTCTAAGGGAATGGGAAGAGGTAATTCAATGGTGCATCAGAACCTCTCCATCGATCCTCTAAACATCTCCATTGATCCATCTCATCTGAATGGGCTTTCGATGCCACCGGGAAGTCAAGCTCTGGAGAAAGGAGAACAGATCATGCAATTGATGCAAGGTCAAACTGCATATTCTGGGTCCGGCATTAACCCAGCAACATCAAAACCATTGGTTCCTCAATCATCAAACAATTCTCAGTTGCAGCAAAAGTTGCATTCAACCCCAGCTACCTCTTCATCGAAGCAACTCCAGCAAAAGCCATCTCATTCTGATAATAGCACTCAAGGTCAGGCACCAGCTGTACCTTCTGGTCATGCAATTTCAGCTTCACATCAATCTATGTCTCCAGCAACTGTGTCTTCCAATCACCTGCAGCTGCAGCCTCAGCAACAGAAGCAAGCTAATCAGACTCAGCCATATGTGCAGAGAGTCCAGCAGAATCGTCAAGTGAATTCGGAAGTTCCAATCAAGCCTCAAAGTGATCTAGCTCTGGCTGAAGAGCAGCCTGTGAATAGTACTTCTCAGGTGGGTTCGAGCATGGCAATTCCTCAGTCCTGTATTGATTCATCTAATATAGTACCGGTTTCTTCTGCCATTTCACAATGGAAATCATCAGAAGCAGTATATGATTCTAATCTGCCAAATTCAACAGCTCAAGAGGGTTCACTTGGGAGCCCATCACTAACAAATTCATCTGGGAATGAACCGATGCCACCTTTTAGTCAAGGGTTAGGCCCTAGGCAGTTATCTGGTAACTTCGCCTCTCATGGACATATTGGAGCGCAATGGCAGCAGAAGCAGCTACTCCAAAAGTCACCTTCGCTACCACCCCCGTCCCAACAACTCTACGATCAACAAGAGCAACAGCAGCAGCAGGAACAAGAATCAACCCAACATCAACTGCCTTTGCCACAGCAGTCTCAGCAACAAATGCCGCATCTGGCAGCAGGGCAAGGCGGTTTGTATATGATGCCTAGTAATTCGAAATCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032991 GO:0035267 GO:0036211 GO:0043170 GO:0043189 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043968 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0051276 GO:0070013 GO:0070603 GO:0071704 GO:0071840 GO:0097346 GO:1901564 GO:1902493 GO:1902494 GO:1902562 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSA Myb_DNA-bind_6

Protein Analysis

1995

Amino Acids

217.06

Weight (kDa)

6.2

Isoelectric Point (pI)

62.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_6	PF13921	1080 - 1128	3.3e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002955)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24870 AT3G24870 AT3G24870 AT3G24870 AT3G24880 AT3G24880 AT3G24880
fragaria_vesca	FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860 FvH4_2g18860
malus_domestica	MD05G1174400.v1.1 MD10G1163500.v1.1
prunus_persica	Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1 Prupe.8G201800_v2.0.a1
pyrus_communis	pycom05g16120 pycom10g14100
rosa_chinensis	RchiOBHm_Chr6g0284671
rosa_laevigata	RLG00000012732
rosa_multiflora	Rmu_co8337863.1_g000001 Rmu_sc0007474.1_g000006
rosa_roxburghii	Rroxscaffold_7G00184490
rosa_rugosa	Rorug06G0165200 Rorug06G0165200 Rorug06G0165300 Rorug06G0165400
rosa_samantha	Rh6AG278300 Rh6BG278300 Rh6CG280600 Rh6DG273300
rosa_wichuraiana	Rw6G023920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	5367
AasI	GACNNNNNNGTC	1 cut(s)	1624
Acc16I	TGCGCA	2 cut(s)	1854, 4556
Acc36I	ACCTGC	2 cut(s)	4327, 5367
Acc65I	GGTACC	2 cut(s)	1544, 4063
AccB1I	GGYRCC	5 cut(s)	1544, 4063, 4630, 4899, 5281
AccB7I	CCANNNNNTGG	4 cut(s)	3092, 3227, 4376, 4802
AccI	GTMKAC	3 cut(s)	254, 361, 1689
AccII	CGCG	2 cut(s)	106, 2647
AccIII	TCCGGA	1 cut(s)	4294
AclWI	GGATC	9 cut(s)	28, 1349, 1572, 2778, 2791, 3602, 3615, 4997, 5018
AcoI	YGGCCR	3 cut(s)	1839, 4354, 4916
AcsI	RAATTY	8 cut(s)	221, 451, 2324, 2825, 3381, 5440, 5632, 5677
AcuI	CTGAAG	7 cut(s)	1419, 3221, 3356, 3444, 4313, 4868, 5505
AcvI	CACGTG	1 cut(s)	662
AcyI	GRCGYC	1 cut(s)	3800
AdeI	CACNNNGTG	2 cut(s)	335, 383
AgeI	ACCGGT	1 cut(s)	5569
AhdI	GACNNNNNGTC	1 cut(s)	2574
AhlI	ACTAGT	1 cut(s)	1181
Alw26I	GTCTC	9 cut(s)	1610, 1806, 2006, 2357, 2395, 3060, 4935, 5337, 5913
AlwI	GGATC	9 cut(s)	28, 1349, 1572, 2778, 2791, 3602, 3615, 4997, 5018
AlwNI	CAGNNNCTG	7 cut(s)	23, 239, 893, 1511, 3227, 4043, 5342
Aor13HI	TCCGGA	1 cut(s)	4294
ApoI	RAATTY	8 cut(s)	221, 451, 2324, 2825, 3381, 5440, 5632, 5677
ArsI	GACNNNNNNTTYG	2 cut(s)	206, 238
AseI	ATTAAT	2 cut(s)	1350, 3152
AsiGI	ACCGGT	1 cut(s)	5569
Asp700I	GAANNNNTTC	2 cut(s)	1017, 4141
Asp718I	GGTACC	2 cut(s)	1544, 4063
AspA2I	CCTAGG	1 cut(s)	5726
AspLEI	GCGC	6 cut(s)	108, 1855, 2649, 4537, 4557, 5773
AsuC2I	CCSGG	1 cut(s)	5058
AsuII	TTCGAA	3 cut(s)	3546, 4057, 5972
AvrII	CCTAGG	1 cut(s)	5726
AxyI	CCTNAGG	1 cut(s)	3357
BaeGI	GKGCMC	1 cut(s)	1145
BaeI	ACNNNNGTAYC	8 cut(s)	1324, 1357, 3907, 3940, 4412, 4445, 4746, 4779
BalI	TGGCCA	2 cut(s)	1841, 4356
BamHI	GGATCC	2 cut(s)	2783, 3607
BanI	GGYRCC	5 cut(s)	1544, 4063, 4630, 4899, 5281
BanII	GRGCYC	1 cut(s)	5666
BarI	GAAGNNNNNNTAC	2 cut(s)	4729, 4761
BauI	CACGAG	2 cut(s)	333, 4260
BbrPI	CACGTG	1 cut(s)	662
BbsI	GAAGAC	6 cut(s)	546, 639, 1710, 2511, 4737, 5340
BbvCI	CCTCAGC	2 cut(s)	4908, 5373
BceAI	ACGGC	4 cut(s)	88, 615, 2372, 2794
BciVI	GTATCC	2 cut(s)	4188, 4440
BclI	TGATCA	3 cut(s)	268, 1672, 2761
BcnI	CCSGG	1 cut(s)	5058
BcoDI	GTCTC	9 cut(s)	1610, 1806, 2006, 2357, 2395, 3060, 4935, 5337, 5913
BcuI	ACTAGT	1 cut(s)	1181
BfmI	CTRYAG	3 cut(s)	3580, 5360, 5366
BfuAI	ACCTGC	2 cut(s)	4327, 5367
BfuI	GTATCC	2 cut(s)	4188, 4440
BglI	GCCNNNNNGGC	2 cut(s)	3214, 3817
BglII	AGATCT	1 cut(s)	974
BlnI	CCTAGG	1 cut(s)	5726
BlpI	GCTNAGC	1 cut(s)	1740
BmcAI	AGTACT	1 cut(s)	5506
BmeRI	GACNNNNNGTC	1 cut(s)	2574
BmrI	ACTGGG	3 cut(s)	2706, 2782, 3102
BmuI	ACTGGG	3 cut(s)	2706, 2782, 3102
BpiI	GAAGAC	6 cut(s)	546, 639, 1710, 2511, 4737, 5340
BpmI	CTGGAG	8 cut(s)	2403, 2709, 3093, 4242, 4305, 5093, 5222, 5319
Bpu10I	CCTNAGC	3 cut(s)	777, 4908, 5373
Bpu1102I	GCTNAGC	1 cut(s)	1740
Bpu14I	TTCGAA	3 cut(s)	3546, 4057, 5972
BpuEI	CTTGAG	8 cut(s)	114, 212, 1344, 1841, 3518, 3642, 5256, 5628
BpuMI	CCSGG	1 cut(s)	5058
Bsa29I	ATCGAT	1 cut(s)	5001
BsaAI	YACGTR	1 cut(s)	662
BsaBI	GATNNNNATC	2 cut(s)	273, 5622
BsaHI	GRCGYC	1 cut(s)	3800
BsaI	GGTCTC	1 cut(s)	2006
BsaWI	WCCGGW	3 cut(s)	436, 4294, 5569
BsaXI	ACNNNNNCTCC	4 cut(s)	69, 99, 170, 200
Bse118I	RCCGGY	2 cut(s)	2191, 5569
Bse21I	CCTNAGG	1 cut(s)	3357
Bse3DI	GCAATG	3 cut(s)	480, 2304, 5780
Bse8I	GATNNNNATC	2 cut(s)	273, 5622
BseAI	TCCGGA	1 cut(s)	4294
BseCI	ATCGAT	1 cut(s)	5001
BseJI	GATNNNNATC	2 cut(s)	273, 5622
BseMI	GCAATG	3 cut(s)	480, 2304, 5780
BseRI	GAGGAG	2 cut(s)	2369, 3601
BseSI	GKGCMC	1 cut(s)	1145
BseYI	CCCAGC	6 cut(s)	4010, 4443, 4717, 4770, 5140, 5212
BsgI	GTGCAG	3 cut(s)	1155, 3314, 5432
Bsh1236I	CGCG	2 cut(s)	106, 2647
BshNI	GGYRCC	5 cut(s)	1544, 4063, 4630, 4899, 5281
BshTI	ACCGGT	1 cut(s)	5569
BshVI	ATCGAT	1 cut(s)	5001
BsiSI	CCGG	8 cut(s)	437, 851, 1572, 2192, 4295, 5057, 5130, 5570
BsmAI	GTCTC	9 cut(s)	1610, 1806, 2006, 2357, 2395, 3060, 4935, 5337, 5913
BsmBI	CGTCTC	1 cut(s)	2395
BsmI	GAATGC	5 cut(s)	2002, 3368, 3468, 3969, 5203
Bso31I	GGTCTC	1 cut(s)	2006
Bsp119I	TTCGAA	3 cut(s)	3546, 4057, 5972
Bsp1286I	GDGCHC	2 cut(s)	1145, 5666
Bsp13I	TCCGGA	1 cut(s)	4294
Bsp1407I	TGTACA	1 cut(s)	3274
Bsp1720I	GCTNAGC	1 cut(s)	1740
Bsp19I	CCATGG	2 cut(s)	54, 3236
BspDI	ATCGAT	1 cut(s)	5001
BspEI	TCCGGA	1 cut(s)	4294
BspFNI	CGCG	2 cut(s)	106, 2647
BspHI	TCATGA	1 cut(s)	1009
BspMAI	CTGCAG	2 cut(s)	5364, 5370
BspMI	ACCTGC	2 cut(s)	4327, 5367
BspPI	GGATC	9 cut(s)	28, 1349, 1572, 2778, 2791, 3602, 3615, 4997, 5018
BspQI	GCTCTTC	2 cut(s)	3945, 5481
BspT104I	TTCGAA	3 cut(s)	3546, 4057, 5972
BspT107I	GGYRCC	5 cut(s)	1544, 4063, 4630, 4899, 5281
BspTNI	GGTCTC	1 cut(s)	2006
BsrDI	GCAATG	3 cut(s)	480, 2304, 5780
BsrFI	RCCGGY	2 cut(s)	2191, 5569
BsrGI	TGTACA	1 cut(s)	3274
BssAI	RCCGGY	2 cut(s)	2191, 5569
BssNI	GRCGYC	1 cut(s)	3800
BssSI	CACGAG	2 cut(s)	333, 4260
BssT1I	CCWWGG	8 cut(s)	54, 528, 681, 2911, 3236, 3926, 4357, 5726
Bst2BI	CACGAG	2 cut(s)	333, 4260
Bst6I	CTCTTC	9 cut(s)	1573, 1713, 1926, 3516, 3945, 4038, 4960, 5227, 5481
BstACI	GRCGYC	1 cut(s)	3800
BstAPI	GCANNNNNTGC	5 cut(s)	323, 3964, 5101, 5200, 5920
BstAUI	TGTACA	1 cut(s)	3274
BstBAI	YACGTR	1 cut(s)	662
BstBI	TTCGAA	3 cut(s)	3546, 4057, 5972
BstDSI	CCRYGG	3 cut(s)	54, 631, 3236
BstENI	CCTNNNNNAGG	1 cut(s)	1586
BstFNI	CGCG	2 cut(s)	106, 2647
BstHHI	GCGC	6 cut(s)	108, 1855, 2649, 4537, 4557, 5773
BstMAI	GTCTC	9 cut(s)	1610, 1806, 2006, 2357, 2395, 3060, 4935, 5337, 5913
BstNSI	RCATGY	1 cut(s)	4640
BstSFI	CTRYAG	3 cut(s)	3580, 5360, 5366
BstSLI	GKGCMC	1 cut(s)	1145
BstUI	CGCG	2 cut(s)	106, 2647
BstV2I	GAAGAC	6 cut(s)	546, 639, 1710, 2511, 4737, 5340
BstX2I	RGATCY	5 cut(s)	20, 974, 1577, 2783, 3607
BstXI	CCANNNNNNTGG	6 cut(s)	1073, 2593, 4189, 4484, 4558, 4627
BstYI	RGATCY	5 cut(s)	20, 974, 1577, 2783, 3607
Bsu15I	ATCGAT	1 cut(s)	5001
Bsu36I	CCTNAGG	1 cut(s)	3357
BsuI	GTATCC	2 cut(s)	4188, 4440
BsuTUI	ATCGAT	1 cut(s)	5001
BtgI	CCRYGG	3 cut(s)	54, 631, 3236
BtsI	GCAGTG	2 cut(s)	1138, 2649
BveI	ACCTGC	2 cut(s)	4327, 5367
CaiI	CAGNNNCTG	7 cut(s)	23, 239, 893, 1511, 3227, 4043, 5342
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	6 cut(s)	108, 1855, 2649, 4537, 4557, 5773
Cfr10I	RCCGGY	2 cut(s)	2191, 5569
ClaI	ATCGAT	1 cut(s)	5001
CseI	GACGC	3 cut(s)	1850, 3362, 3789
CspAI	ACCGGT	1 cut(s)	5569
DraIII	CACNNNGTG	2 cut(s)	335, 383
DrdI	GACNNNNNNGTC	1 cut(s)	1624
DriI	GACNNNNNGTC	1 cut(s)	2574
DseDI	GACNNNNNNGTC	1 cut(s)	1624
EaeI	YGGCCR	3 cut(s)	1839, 4354, 4916
Eam1104I	CTCTTC	9 cut(s)	1573, 1713, 1926, 3516, 3945, 4038, 4960, 5227, 5481
Eam1105I	GACNNNNNGTC	1 cut(s)	2574
EarI	CTCTTC	9 cut(s)	1573, 1713, 1926, 3516, 3945, 4038, 4960, 5227, 5481
EciI	GGCGGA	2 cut(s)	90, 2796
Eco130I	CCWWGG	8 cut(s)	54, 528, 681, 2911, 3236, 3926, 4357, 5726
Eco147I	AGGCCT	2 cut(s)	2605, 4867
Eco24I	GRGCYC	1 cut(s)	5666
Eco31I	GGTCTC	1 cut(s)	2006
Eco32I	GATATC	2 cut(s)	693, 3045
Eco57I	CTGAAG	7 cut(s)	1419, 3221, 3356, 3444, 4313, 4868, 5505
Eco72I	CACGTG	1 cut(s)	662
Eco81I	CCTNAGG	1 cut(s)	3357
EcoNI	CCTNNNNNAGG	1 cut(s)	1586
EcoO109I	RGGNCCY	4 cut(s)	2460, 3096, 4514, 5723
EcoRI	GAATTC	2 cut(s)	451, 5440
EcoRV	GATATC	2 cut(s)	693, 3045
EcoT14I	CCWWGG	8 cut(s)	54, 528, 681, 2911, 3236, 3926, 4357, 5726
EcoT22I	ATGCAT	2 cut(s)	6, 462
EcoT38I	GRGCYC	1 cut(s)	5666
ErhI	CCWWGG	8 cut(s)	54, 528, 681, 2911, 3236, 3926, 4357, 5726
Esp3I	CGTCTC	1 cut(s)	2395
FalI	AAGNNNNNCTT	2 cut(s)	123, 155
FauI	CCCGC	3 cut(s)	153, 1132, 3894
FauNDI	CATATG	5 cut(s)	1217, 2530, 2554, 2845, 5407
FbaI	TGATCA	3 cut(s)	268, 1672, 2761
FblI	GTMKAC	3 cut(s)	254, 361, 1689
FriOI	GRGCYC	1 cut(s)	5666
FspAI	RTGCGCAY	1 cut(s)	4556
FspI	TGCGCA	2 cut(s)	1854, 4556
GlaI	GCGC	6 cut(s)	107, 1854, 2648, 4536, 4556, 5772
GsaI	CCCAGC	6 cut(s)	4014, 4447, 4721, 4774, 5144, 5216
GsuI	CTGGAG	8 cut(s)	2403, 2709, 3093, 4242, 4305, 5093, 5222, 5319
HapII	CCGG	8 cut(s)	437, 851, 1572, 2192, 4295, 5057, 5130, 5570
HgaI	GACGC	3 cut(s)	1850, 3362, 3789
HhaI	GCGC	6 cut(s)	108, 1855, 2649, 4537, 4557, 5773
Hin1I	GRCGYC	1 cut(s)	3800
Hin6I	GCGC	6 cut(s)	106, 1853, 2647, 4535, 4555, 5771
HinP1I	GCGC	6 cut(s)	106, 1853, 2647, 4535, 4555, 5771
HincII	GTYRAC	6 cut(s)	70, 362, 914, 1333, 1990, 2579
HindII	GTYRAC	6 cut(s)	70, 362, 914, 1333, 1990, 2579
HindIII	AAGCTT	4 cut(s)	779, 1362, 1457, 1520
HpaII	CCGG	8 cut(s)	437, 851, 1572, 2192, 4295, 5057, 5130, 5570
HpyCH4IV	ACGT	1 cut(s)	661
HpySE526I	ACGT	1 cut(s)	661
Hsp92I	GRCGYC	1 cut(s)	3800
HspAI	GCGC	6 cut(s)	106, 1853, 2647, 4535, 4555, 5771
KflI	GGGWCCC	1 cut(s)	3096
Kpn2I	TCCGGA	1 cut(s)	4294
KpnI	GGTACC	2 cut(s)	1548, 4067
Ksp22I	TGATCA	3 cut(s)	268, 1672, 2761
LguI	GCTCTTC	2 cut(s)	3945, 5481
MaeII	ACGT	1 cut(s)	661
MfeI	CAATTG	5 cut(s)	117, 954, 2319, 3003, 5096
MflI	RGATCY	5 cut(s)	20, 974, 1577, 2783, 3607
MhlI	GDGCHC	2 cut(s)	1145, 5666
MlsI	TGGCCA	2 cut(s)	1841, 4356
MluNI	TGGCCA	2 cut(s)	1841, 4356
MmeI	TCCRAC	4 cut(s)	2073, 2904, 4666, 4793
Mox20I	TGGCCA	2 cut(s)	1841, 4356
Mph1103I	ATGCAT	2 cut(s)	6, 462
MroI	TCCGGA	1 cut(s)	4294
MroXI	GAANNNNTTC	2 cut(s)	1017, 4141
MscI	TGGCCA	2 cut(s)	1841, 4356
MslI	CAYNNNNRTG	5 cut(s)	9, 2591, 3765, 4556, 5037
Msp20I	TGGCCA	2 cut(s)	1841, 4356
MspA1I	CMGCKG	6 cut(s)	1139, 1289, 4576, 4915, 5288, 5365
MspI	CCGG	8 cut(s)	437, 851, 1572, 2192, 4295, 5057, 5130, 5570
MunI	CAATTG	5 cut(s)	117, 954, 2319, 3003, 5096
Mva1269I	GAATGC	5 cut(s)	2002, 3368, 3468, 3969, 5203
MvnI	CGCG	2 cut(s)	106, 2647
NciI	CCSGG	1 cut(s)	5058
NcoI	CCATGG	2 cut(s)	54, 3236
NdeI	CATATG	5 cut(s)	1217, 2530, 2554, 2845, 5407
NmeAIII	GCCGAG	1 cut(s)	134
NsbI	TGCGCA	2 cut(s)	1854, 4556
NsiI	ATGCAT	2 cut(s)	6, 462
NspI	RCATGY	1 cut(s)	4640
NspV	TTCGAA	3 cut(s)	3546, 4057, 5972
PacI	TTAATTAA	1 cut(s)	3156
PagI	TCATGA	1 cut(s)	1009
PaqCI	CACCTGC	1 cut(s)	5367
PceI	AGGCCT	2 cut(s)	2605, 4867
PciSI	GCTCTTC	2 cut(s)	3945, 5481
PcsI	WCGNNNNNNNCGW	1 cut(s)	4054
PctI	GAATGC	5 cut(s)	2002, 3368, 3468, 3969, 5203
PdmI	GAANNNNTTC	2 cut(s)	1017, 4141
PflFI	GACNNNGTC	1 cut(s)	344
PflMI	CCANNNNNTGG	4 cut(s)	3092, 3227, 4376, 4802
PfoI	TCCNGGA	2 cut(s)	4036, 4237
PinAI	ACCGGT	1 cut(s)	5569
PmaCI	CACGTG	1 cut(s)	662
PmlI	CACGTG	1 cut(s)	662
Ppu21I	YACGTR	1 cut(s)	662
PpuMI	RGGWCCY	1 cut(s)	3096
PshBI	ATTAAT	2 cut(s)	1350, 3152
Psp5II	RGGWCCY	1 cut(s)	3096
PspCI	CACGTG	1 cut(s)	662
PspFI	CCCAGC	6 cut(s)	4010, 4443, 4717, 4770, 5140, 5212
PspPPI	RGGWCCY	1 cut(s)	3096
PstI	CTGCAG	2 cut(s)	5364, 5370
PstNI	CAGNNNCTG	7 cut(s)	23, 239, 893, 1511, 3227, 4043, 5342
PsuI	RGATCY	5 cut(s)	20, 974, 1577, 2783, 3607
PsyI	GACNNNGTC	1 cut(s)	344
PvuII	CAGCTG	4 cut(s)	1289, 4576, 5288, 5365
RseI	CAYNNNNRTG	5 cut(s)	9, 2591, 3765, 4556, 5037
SalI	GTCGAC	1 cut(s)	360
SapI	GCTCTTC	2 cut(s)	3945, 5481
ScaI	AGTACT	1 cut(s)	5506
SduI	GDGCHC	2 cut(s)	1145, 5666
SfcI	CTRYAG	3 cut(s)	3580, 5360, 5366
SfuI	TTCGAA	3 cut(s)	3546, 4057, 5972
SmiMI	CAYNNNNRTG	5 cut(s)	9, 2591, 3765, 4556, 5037
SmlI	CTYRAG	8 cut(s)	129, 191, 1359, 1820, 3533, 3657, 5271, 5643
SmoI	CTYRAG	8 cut(s)	129, 191, 1359, 1820, 3533, 3657, 5271, 5643
SpeI	ACTAGT	1 cut(s)	1181
SseBI	AGGCCT	2 cut(s)	2605, 4867
StuI	AGGCCT	2 cut(s)	2605, 4867
StyI	CCWWGG	8 cut(s)	54, 528, 681, 2911, 3236, 3926, 4357, 5726
TaiI	ACGT	1 cut(s)	664
TaqII	GACCGA	1 cut(s)	1058
TatI	WGTACW	4 cut(s)	1220, 3274, 4736, 5504
TauI	GCSGC	4 cut(s)	4282, 4636, 4918, 5926
TspGWI	ACGGA	2 cut(s)	545, 3199
Tth111I	GACNNNGTC	1 cut(s)	344
Van91I	CCANNNNNTGG	4 cut(s)	3092, 3227, 4376, 4802
VspI	ATTAAT	2 cut(s)	1350, 3152
XagI	CCTNNNNNAGG	1 cut(s)	1586
XapI	RAATTY	8 cut(s)	221, 451, 2324, 2825, 3381, 5440, 5632, 5677
XbaI	TCTAGA	1 cut(s)	3058
XceI	RCATGY	1 cut(s)	4640
XcmI	CCANNNNNNNNNTGG	1 cut(s)	61
XmaJI	CCTAGG	1 cut(s)	5726
XmiI	GTMKAC	3 cut(s)	254, 361, 1689
XmnI	GAANNNNTTC	2 cut(s)	1017, 4141
ZrmI	AGTACT	1 cut(s)	5506
Zsp2I	ATGCAT	2 cut(s)	6, 462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.