Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26590 AT3G26590 AT5G38030 |
| fragaria_vesca | FvH4_4g25500 FvH4_4g25500 FvH4_4g25510 |
| malus_domestica | MD13G1102100.v1.1 MD16G1102700.v1.1 |
| prunus_persica | Prupe.1G243700_v2.0.a1 |
| pyrus_communis | pycom13g08920 pycom13g08930 pycom16g08710 pycom16g08730 |
| rosa_chinensis | RchiOBHm_Chr4g0432851 RchiOBHm_Chr4g0432861 |
| rosa_laevigata | RLG00000006804 RLG00000006805 RLG00000030674 |
| rosa_multiflora | Rmu_co8449711.1_g000001 Rmu_sc0005234.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00374290 Rroxscaffold_5G00374300 |
| rosa_rugosa | Rorug04G0263200 Rorug04G0263300 Rorug04G0263400 Rorug04G0263500 Rorug04G0263600 |
| rosa_samantha | Rh4AG317500 Rh4AG317700 Rh4BG325800 Rh4CG340800 Rh4CG340900 Rh4CG341000 Rh4DG320900 Rh4DG321000 |
| rosa_wichuraiana | Rw4G027610 Rw4G027620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1145 |
| AccI | GTMKAC | 1 cut(s) | 78 |
| AccII | CGCG | 4 cut(s) | 458, 491, 698, 1031 |
| AciI | CCGC | 9 cut(s) | 41, 44, 165, 249, 444, 476, 491, 555, 1029 |
| AclI | AACGTT | 1 cut(s) | 52 |
| AclWI | GGATC | 1 cut(s) | 511 |
| AcoI | YGGCCR | 3 cut(s) | 156, 492, 594 |
| AcsI | RAATTY | 3 cut(s) | 122, 560, 1034 |
| AcvI | CACGTG | 2 cut(s) | 628, 639 |
| AfaI | GTAC | 4 cut(s) | 152, 734, 748, 1322 |
| AflIII | ACRYGT | 4 cut(s) | 625, 696, 749, 1287 |
| AgsI | TTSAA | 3 cut(s) | 127, 892, 1437 |
| AjnI | CCWGG | 1 cut(s) | 673 |
| AleI | CACNNNNGTG | 1 cut(s) | 179 |
| AluBI | AGCT | 7 cut(s) | 145, 658, 727, 914, 1013, 1241, 1327 |
| AluI | AGCT | 7 cut(s) | 145, 658, 727, 914, 1013, 1241, 1327 |
| Alw26I | GTCTC | 2 cut(s) | 20, 259 |
| AlwI | GGATC | 1 cut(s) | 511 |
| AoxI | GGCC | 4 cut(s) | 156, 492, 594, 1260 |
| ApeKI | GCWGC | 1 cut(s) | 914 |
| ApoI | RAATTY | 3 cut(s) | 122, 560, 1034 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 255, 287 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 502 |
| AspLEI | GCGC | 2 cut(s) | 203, 491 |
| AspS9I | GGNCC | 2 cut(s) | 161, 1371 |
| AsuHPI | GGTGA | 3 cut(s) | 88, 406, 767 |
| AvaII | GGWCC | 2 cut(s) | 161, 1371 |
| BauI | CACGAG | 1 cut(s) | 775 |
| BbrPI | CACGTG | 2 cut(s) | 628, 639 |
| BbsI | GAAGAC | 1 cut(s) | 208 |
| BbvCI | CCTCAGC | 1 cut(s) | 1443 |
| BbvI | GCAGC | 1 cut(s) | 901 |
| BccI | CCATC | 8 cut(s) | 245, 515, 548, 932, 939, 1026, 1129, 1239 |
| BceAI | ACGGC | 4 cut(s) | 489, 581, 668, 965 |
| BciT130I | CCWGG | 1 cut(s) | 675 |
| BcoDI | GTCTC | 2 cut(s) | 20, 259 |
| BfaI | CTAG | 2 cut(s) | 486, 680 |
| BfmI | CTRYAG | 1 cut(s) | 909 |
| BfoI | RGCGCY | 1 cut(s) | 204 |
| BisI | GCNGC | 6 cut(s) | 42, 249, 444, 477, 492, 915 |
| BlpI | GCTNAGC | 1 cut(s) | 723 |
| BlsI | GCNGC | 6 cut(s) | 43, 250, 445, 478, 493, 916 |
| Bme1390I | CCNGG | 1 cut(s) | 675 |
| Bme18I | GGWCC | 2 cut(s) | 161, 1371 |
| BmgT120I | GGNCC | 2 cut(s) | 161, 1371 |
| BmiI | GGNNCC | 2 cut(s) | 163, 1372 |
| BmrFI | CCNGG | 1 cut(s) | 675 |
| BmsI | GCATC | 1 cut(s) | 303 |
| BpiI | GAAGAC | 1 cut(s) | 208 |
| BpmI | CTGGAG | 1 cut(s) | 644 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1443 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 723 |
| BsaAI | YACGTR | 4 cut(s) | 628, 639, 750, 1288 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1116 |
| BsaJI | CCNNGG | 1 cut(s) | 1374 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 839, 869, 1458, 1488 |
| Bse118I | RCCGGY | 3 cut(s) | 158, 221, 278 |
| Bse1I | ACTGG | 1 cut(s) | 661 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1116 |
| BseBI | CCWGG | 1 cut(s) | 675 |
| BseDI | CCNNGG | 1 cut(s) | 1374 |
| BseGI | GGATG | 6 cut(s) | 176, 950, 975, 1018, 1250, 1407 |
| BseJI | GATNNNNATC | 1 cut(s) | 1116 |
| BseMII | CTCAG | 3 cut(s) | 224, 737, 1434 |
| BseNI | ACTGG | 1 cut(s) | 661 |
| BseRI | GAGGAG | 1 cut(s) | 1482 |
| BseX3I | CGGCCG | 1 cut(s) | 492 |
| BseXI | GCAGC | 1 cut(s) | 901 |
| Bsh1236I | CGCG | 4 cut(s) | 458, 491, 698, 1031 |
| Bsh1285I | CGRYCG | 1 cut(s) | 495 |
| BshFI | GGCC | 4 cut(s) | 158, 494, 596, 1262 |
| BsiEI | CGRYCG | 1 cut(s) | 495 |
| BsiSI | CCGG | 4 cut(s) | 159, 222, 279, 495 |
| BslFI | GGGAC | 3 cut(s) | 147, 1384, 1436 |
| BsmAI | GTCTC | 2 cut(s) | 20, 259 |
| BsmBI | CGTCTC | 1 cut(s) | 20 |
| BsmFI | GGGAC | 3 cut(s) | 147, 1384, 1436 |
| BsmI | GAATGC | 1 cut(s) | 901 |
| BsnI | GGCC | 4 cut(s) | 158, 494, 596, 1262 |
| Bsp1407I | TGTACA | 1 cut(s) | 732 |
| Bsp143I | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 723 |
| BspACI | CCGC | 9 cut(s) | 41, 44, 165, 249, 444, 476, 491, 555, 1029 |
| BspANI | GGCC | 4 cut(s) | 158, 494, 596, 1262 |
| BspCNI | CTCAG | 3 cut(s) | 223, 736, 1435 |
| BspFNI | CGCG | 4 cut(s) | 458, 491, 698, 1031 |
| BspLI | GGNNCC | 2 cut(s) | 163, 1372 |
| BspPI | GGATC | 1 cut(s) | 511 |
| BsrFI | RCCGGY | 3 cut(s) | 158, 221, 278 |
| BsrGI | TGTACA | 1 cut(s) | 732 |
| BsrI | ACTGG | 1 cut(s) | 661 |
| BssAI | RCCGGY | 3 cut(s) | 158, 221, 278 |
| BssECI | CCNNGG | 1 cut(s) | 1374 |
| BssMI | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| BssSI | CACGAG | 1 cut(s) | 775 |
| Bst2BI | CACGAG | 1 cut(s) | 775 |
| Bst2UI | CCWGG | 1 cut(s) | 675 |
| Bst4CI | ACNGT | 2 cut(s) | 103, 1375 |
| BstAUI | TGTACA | 1 cut(s) | 732 |
| BstBAI | YACGTR | 4 cut(s) | 628, 639, 750, 1288 |
| BstC8I | GCNNGC | 3 cut(s) | 280, 1251, 1279 |
| BstDEI | CTNAG | 3 cut(s) | 210, 723, 1443 |
| BstDSI | CCRYGG | 1 cut(s) | 1374 |
| BstF5I | GGATG | 6 cut(s) | 176, 950, 975, 1018, 1250, 1407 |
| BstFNI | CGCG | 4 cut(s) | 458, 491, 698, 1031 |
| BstH2I | RGCGCY | 1 cut(s) | 204 |
| BstHHI | GCGC | 2 cut(s) | 203, 491 |
| BstKTI | GATC | 6 cut(s) | 61, 96, 389, 519, 1114, 1407 |
| BstMAI | GTCTC | 2 cut(s) | 20, 259 |
| BstMBI | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| BstMCI | CGRYCG | 1 cut(s) | 495 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 164, 248, 347, 959, 1238, 1259, 1439 |
| BstNI | CCWGG | 1 cut(s) | 675 |
| BstSCI | CCNGG | 1 cut(s) | 673 |
| BstSFI | CTRYAG | 1 cut(s) | 909 |
| BstUI | CGCG | 4 cut(s) | 458, 491, 698, 1031 |
| BstV1I | GCAGC | 1 cut(s) | 901 |
| BstV2I | GAAGAC | 1 cut(s) | 208 |
| BstZI | CGGCCG | 1 cut(s) | 492 |
| BsuRI | GGCC | 4 cut(s) | 158, 494, 596, 1262 |
| BtgI | CCRYGG | 1 cut(s) | 1374 |
| BtgZI | GCGATG | 2 cut(s) | 223, 1258 |
| BtsCI | GGATG | 6 cut(s) | 176, 950, 975, 1018, 1250, 1407 |
| BtsI | GCAGTG | 3 cut(s) | 36, 1059, 1260 |
| BtsIMutI | CAGTG | 4 cut(s) | 36, 668, 1059, 1260 |
| Cac8I | GCNNGC | 3 cut(s) | 280, 1251, 1279 |
| CfoI | GCGC | 2 cut(s) | 203, 491 |
| Cfr10I | RCCGGY | 3 cut(s) | 158, 221, 278 |
| Cfr13I | GGNCC | 2 cut(s) | 161, 1371 |
| CseI | GACGC | 4 cut(s) | 37, 447, 687, 1075 |
| Csp6I | GTAC | 4 cut(s) | 151, 733, 747, 1321 |
| CviAII | CATG | 7 cut(s) | 298, 390, 514, 592, 718, 931, 1398 |
| CviQI | GTAC | 4 cut(s) | 151, 733, 747, 1321 |
| DdeI | CTNAG | 3 cut(s) | 210, 723, 1443 |
| DpnI | GATC | 6 cut(s) | 60, 95, 388, 518, 1113, 1406 |
| DpnII | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1145 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1145 |
| EaeI | YGGCCR | 3 cut(s) | 156, 492, 594 |
| EagI | CGGCCG | 1 cut(s) | 492 |
| EciI | GGCGGA | 1 cut(s) | 59 |
| EclXI | CGGCCG | 1 cut(s) | 492 |
| Eco32I | GATATC | 1 cut(s) | 603 |
| Eco47I | GGWCC | 2 cut(s) | 161, 1371 |
| Eco52I | CGGCCG | 1 cut(s) | 492 |
| Eco72I | CACGTG | 2 cut(s) | 628, 639 |
| EcoRI | GAATTC | 1 cut(s) | 122 |
| EcoRII | CCWGG | 1 cut(s) | 673 |
| EcoRV | GATATC | 1 cut(s) | 603 |
| Esp3I | CGTCTC | 1 cut(s) | 20 |
| FaeI | CATG | 7 cut(s) | 301, 393, 517, 595, 721, 934, 1401 |
| FaqI | GGGAC | 3 cut(s) | 147, 1384, 1436 |
| FatI | CATG | 7 cut(s) | 297, 389, 513, 591, 717, 930, 1397 |
| FauI | CCCGC | 1 cut(s) | 172 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 6 cut(s) | 42, 249, 444, 477, 492, 915 |
| FokI | GGATG | 6 cut(s) | 163, 957, 982, 1005, 1257, 1414 |
| Fsp4HI | GCNGC | 6 cut(s) | 42, 249, 444, 477, 492, 915 |
| FspBI | CTAG | 2 cut(s) | 486, 680 |
| GlaI | GCGC | 2 cut(s) | 202, 490 |
| GluI | GCNGC | 6 cut(s) | 42, 249, 444, 477, 492, 915 |
| GsuI | CTGGAG | 1 cut(s) | 644 |
| HaeII | RGCGCY | 1 cut(s) | 204 |
| HaeIII | GGCC | 4 cut(s) | 158, 494, 596, 1262 |
| HapII | CCGG | 4 cut(s) | 159, 222, 279, 495 |
| HgaI | GACGC | 4 cut(s) | 37, 447, 687, 1075 |
| HhaI | GCGC | 2 cut(s) | 203, 491 |
| Hin1II | CATG | 7 cut(s) | 301, 393, 517, 595, 721, 934, 1401 |
| Hin6I | GCGC | 2 cut(s) | 201, 489 |
| HinP1I | GCGC | 2 cut(s) | 201, 489 |
| HincII | GTYRAC | 3 cut(s) | 79, 1270, 1365 |
| HindII | GTYRAC | 3 cut(s) | 79, 1270, 1365 |
| HindIII | AAGCTT | 1 cut(s) | 1325 |
| HinfI | GANTC | 4 cut(s) | 1077, 1093, 1296, 1347 |
| HpaI | GTTAAC | 1 cut(s) | 1270 |
| HpaII | CCGG | 4 cut(s) | 159, 222, 279, 495 |
| HphI | GGTGA | 3 cut(s) | 88, 406, 767 |
| Hpy166II | GTNNAC | 7 cut(s) | 79, 184, 335, 376, 733, 1270, 1365 |
| Hpy188I | TCNGA | 5 cut(s) | 58, 93, 1076, 1383, 1480 |
| Hpy8I | GTNNAC | 7 cut(s) | 79, 184, 335, 376, 733, 1270, 1365 |
| Hpy99I | CGWCG | 7 cut(s) | 80, 83, 107, 263, 275, 703, 1069 |
| HpyCH4III | ACNGT | 2 cut(s) | 103, 1375 |
| HpyCH4IV | ACGT | 8 cut(s) | 52, 129, 405, 627, 638, 749, 1266, 1287 |
| HpyCH4V | TGCA | 6 cut(s) | 382, 568, 614, 930, 1184, 1410 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 164, 248, 347, 959, 1238, 1259, 1439 |
| HpyF3I | CTNAG | 3 cut(s) | 210, 723, 1443 |
| HpySE526I | ACGT | 8 cut(s) | 52, 129, 405, 627, 638, 749, 1266, 1287 |
| Hsp92II | CATG | 7 cut(s) | 301, 393, 517, 595, 721, 934, 1401 |
| HspAI | GCGC | 2 cut(s) | 201, 489 |
| KroI | GCCGGC | 1 cut(s) | 278 |
| KroNI | GCCGGC | 1 cut(s) | 280 |
| KspAI | GTTAAC | 1 cut(s) | 1270 |
| Kzo9I | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| LmnI | GCTCC | 4 cut(s) | 347, 663, 1010, 1238 |
| Lsp1109I | GCAGC | 1 cut(s) | 901 |
| LweI | GCATC | 1 cut(s) | 303 |
| MaeI | CTAG | 2 cut(s) | 486, 680 |
| MaeII | ACGT | 8 cut(s) | 52, 129, 405, 627, 638, 749, 1266, 1287 |
| MaeIII | GTNAC | 2 cut(s) | 224, 406 |
| MalI | GATC | 6 cut(s) | 60, 95, 388, 518, 1113, 1406 |
| MboI | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| MboII | GAAGA | 4 cut(s) | 53, 59, 208, 904 |
| MluCI | AATT | 8 cut(s) | 122, 356, 544, 560, 793, 1004, 1034, 1417 |
| MluI | ACGCGT | 1 cut(s) | 696 |
| MmeI | TCCRAC | 2 cut(s) | 575, 1234 |
| MroNI | GCCGGC | 1 cut(s) | 278 |
| MroXI | GAANNNNTTC | 1 cut(s) | 502 |
| MseI | TTAA | 5 cut(s) | 693, 1161, 1269, 1329, 1394 |
| MslI | CAYNNNNRTG | 5 cut(s) | 179, 512, 596, 716, 929 |
| MspA1I | CMGCKG | 1 cut(s) | 251 |
| MspI | CCGG | 4 cut(s) | 159, 222, 279, 495 |
| MspR9I | CCNGG | 1 cut(s) | 675 |
| Mva1269I | GAATGC | 1 cut(s) | 901 |
| MvaI | CCWGG | 1 cut(s) | 675 |
| MvnI | CGCG | 4 cut(s) | 458, 491, 698, 1031 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 164, 248, 347, 959, 1238, 1259, 1439 |
| NaeI | GCCGGC | 1 cut(s) | 280 |
| NdeII | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| NgoMIV | GCCGGC | 1 cut(s) | 278 |
| NlaIII | CATG | 7 cut(s) | 301, 393, 517, 595, 721, 934, 1401 |
| NlaIV | GGNNCC | 2 cut(s) | 163, 1372 |
| NmeAIII | GCCGAG | 1 cut(s) | 177 |
| NmuCI | GTSAC | 2 cut(s) | 224, 406 |
| OliI | CACNNNNGTG | 1 cut(s) | 179 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 111, 267 |
| PctI | GAATGC | 1 cut(s) | 901 |
| PdiI | GCCGGC | 1 cut(s) | 280 |
| PdmI | GAANNNNTTC | 1 cut(s) | 502 |
| PfeI | GAWTC | 4 cut(s) | 1077, 1093, 1296, 1347 |
| PkrI | GCNGC | 6 cut(s) | 43, 250, 445, 478, 493, 916 |
| PmaCI | CACGTG | 2 cut(s) | 628, 639 |
| PmlI | CACGTG | 2 cut(s) | 628, 639 |
| Ppu21I | YACGTR | 4 cut(s) | 628, 639, 750, 1288 |
| Psp1406I | AACGTT | 1 cut(s) | 52 |
| Psp6I | CCWGG | 1 cut(s) | 673 |
| PspCI | CACGTG | 2 cut(s) | 628, 639 |
| PspGI | CCWGG | 1 cut(s) | 673 |
| PspN4I | GGNNCC | 2 cut(s) | 163, 1372 |
| PspPI | GGNCC | 2 cut(s) | 161, 1371 |
| RsaI | GTAC | 4 cut(s) | 152, 734, 748, 1322 |
| RsaNI | GTAC | 4 cut(s) | 151, 733, 747, 1321 |
| RseI | CAYNNNNRTG | 5 cut(s) | 179, 512, 596, 716, 929 |
| SalI | GTCGAC | 1 cut(s) | 77 |
| SaqAI | TTAA | 5 cut(s) | 693, 1161, 1269, 1329, 1394 |
| SatI | GCNGC | 6 cut(s) | 42, 249, 444, 477, 492, 915 |
| Sau3AI | GATC | 6 cut(s) | 58, 93, 386, 516, 1111, 1404 |
| Sau96I | GGNCC | 2 cut(s) | 161, 1371 |
| ScrFI | CCNGG | 1 cut(s) | 675 |
| SfaNI | GCATC | 1 cut(s) | 303 |
| SfcI | CTRYAG | 1 cut(s) | 909 |
| SgrDI | CGTCGACG | 1 cut(s) | 77 |
| SinI | GGWCC | 2 cut(s) | 161, 1371 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 179, 512, 596, 716, 929 |
| Sse9I | AATT | 8 cut(s) | 122, 356, 544, 560, 793, 1004, 1034, 1417 |
| SsiI | CCGC | 9 cut(s) | 41, 44, 165, 249, 444, 476, 491, 555, 1029 |
| SspI | AATATT | 3 cut(s) | 191, 501, 937 |
| SspMI | CTAG | 2 cut(s) | 486, 680 |
| StyD4I | CCNGG | 1 cut(s) | 673 |
| TaaI | ACNGT | 2 cut(s) | 103, 1375 |
| TaiI | ACGT | 8 cut(s) | 55, 132, 408, 630, 641, 752, 1269, 1290 |
| TaqI | TCGA | 3 cut(s) | 78, 261, 1064 |
| TasI | AATT | 8 cut(s) | 122, 356, 544, 560, 793, 1004, 1034, 1417 |
| TatI | WGTACW | 1 cut(s) | 732 |
| TauI | GCSGC | 5 cut(s) | 44, 251, 446, 479, 494 |
| TfiI | GAWTC | 4 cut(s) | 1077, 1093, 1296, 1347 |
| Tru1I | TTAA | 5 cut(s) | 693, 1161, 1269, 1329, 1394 |
| Tru9I | TTAA | 5 cut(s) | 693, 1161, 1269, 1329, 1394 |
| TscAI | CASTG | 4 cut(s) | 43, 668, 1059, 1260 |
| TseFI | GTSAC | 2 cut(s) | 224, 406 |
| TseI | GCWGC | 1 cut(s) | 914 |
| Tsp45I | GTSAC | 2 cut(s) | 224, 406 |
| TspDTI | ATGAA | 6 cut(s) | 700, 779, 947, 986, 1017, 1069 |
| TspGWI | ACGGA | 5 cut(s) | 38, 64, 169, 247, 259 |
| TspRI | CASTG | 4 cut(s) | 43, 668, 1059, 1260 |
| VpaK11BI | GGWCC | 2 cut(s) | 161, 1371 |
| XapI | RAATTY | 3 cut(s) | 122, 560, 1034 |
| XmiI | GTMKAC | 1 cut(s) | 78 |
| XmnI | GAANNNNTTC | 1 cut(s) | 502 |
| XspI | CTAG | 2 cut(s) | 486, 680 |