AT3G26590

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
9761672 .. 9765570
3899 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G26590.1

Sequence Viewer

Length: 1503 bp
ATGGCAAAAGACAAAGATATAACGGAGACGCTTCTCACTGCGGCGGAAGAACGTTCTGATCTTCCTTTCTTATCCGTCGACGATATTCCTCCGATCACCACCGTCGGTGGCTTCGTTAGGGAATTCAACGTGGAAACCAAAAAGCTATGGTACTTGGCCGGTCCCGCCATTTTCACATCCGTGAACCAATATTCTCTCGGCGCTATTACTCAGGTCTTCGCCGGTCACATCAGCACCATCGCTCTTGCCGCTGTCTCCGTCGAAAACTCCGTCGTTGCCGGCTTCTCATTCGGCATCATGCTTGGAATGGGAAGTGCGTTAGAAACGCTATGTGGACAAGCGTTTGGAGCAGGAAAATTGTCAATGCTTGGCGTTTACTTGCAACGATCATGGGTGATACTAAACGTGACTGCTCTTATCCTCTCTCTCCTTTACATTTTCGCCGCCCCTATCCTCGCGTCCATTGGTCAAACGGCGGCAATCTCTAGCGCGGCCGGAATATTTTCCATCTACATGATCCCTCAAATCTTTGCCTACGCCATCAATTTTCCAACCGCTAAATTTTTGCAATCGCAAAGCAAGATAATGGTCATGGCCGTGATATCGGCTGTTGCACTTGTTATACACGTGCCTCTCACGTGGTTTGTCATTGTGAAGCTCCAGTGGGGTATGCCAGGTCTAGCCGTAGTGCTTAACGCGTCGTGGTGCTTCATTGACATGGCTCAGCTTGTGTACATATTTAGTGGTACGTGTGGTGAGGCTTGGTCTGGTTTCTCGTGGGAGGCTTTTCATAATTTGTGGAGTTTCGTTAGATTATCTTTGGCTTCTGCTGTTATGCTCTGTTTGGAGGTTTGGTATTTTATGGCAATCATATTATTTGCTGGATATTTGAAGAATGCTGAAATCTCTGTAGCTGCCCTCTCCATCTGCATGAATATTTTGGGATGGACTGCTATGATTGCTATTGGGATGAACACAGCCGTAAGTGTGAGAGTGTCTAATGAATTAGGAGCTAACCATCCAAGAACCGCGAAATTCTCACTACTTGTGGCAGTGATAACATCGACGCTAATCGGATTCATTGTATCAATGATTCTACTCATCTTTAGAGATCAATATCCATCACTTTTTGTGAAAGACGAAAAAGTCATCATTCTTGTTAAAGAACTCACACCAATACTTGCACTTTCCATTGTCATCAACAATGTCCAACCTGTCTTATCAGGTGTGGCTGTGGGAGCTGGATGGCAAGCAGTGGTGGCCTACGTTAACATCGCCTGCTATTACGTGTTTGGAATCCCATTTGGTCTATTATTGGGGTACAAGCTTAACTATGGTGTAATGGGAATCTGGTGTGGAATGTTGACGGGGACCGTGGTTCAGACAATAGTTTTAACATGGATGATCTGCAAAACAAATTGGGACACAGAGGCTTCAATGGCTGAGGATAGGATAAGAGAATGGGGAGGAGAAGTATCAGAAATAAAGCAACTCATAAACTAA

Protein Analysis

500

Amino Acids

54.32

Weight (kDa)

5.66

Isoelectric Point (pI)

28.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 55 - 214 4.8e-33 MatE
MatE PF01554 276 - 437 2.8e-38 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1145
AccI GTMKAC 1 cut(s) 78
AccII CGCG 4 cut(s) 458, 491, 698, 1031
AciI CCGC 9 cut(s) 41, 44, 165, 249, 444, 476, 491, 555, 1029
AclI AACGTT 1 cut(s) 52
AclWI GGATC 1 cut(s) 511
AcoI YGGCCR 3 cut(s) 156, 492, 594
AcsI RAATTY 3 cut(s) 122, 560, 1034
AcvI CACGTG 2 cut(s) 628, 639
AfaI GTAC 4 cut(s) 152, 734, 748, 1322
AflIII ACRYGT 4 cut(s) 625, 696, 749, 1287
AgsI TTSAA 3 cut(s) 127, 892, 1437
AjnI CCWGG 1 cut(s) 673
AleI CACNNNNGTG 1 cut(s) 179
AluBI AGCT 7 cut(s) 145, 658, 727, 914, 1013, 1241, 1327
AluI AGCT 7 cut(s) 145, 658, 727, 914, 1013, 1241, 1327
Alw26I GTCTC 2 cut(s) 20, 259
AlwI GGATC 1 cut(s) 511
AoxI GGCC 4 cut(s) 156, 492, 594, 1260
ApeKI GCWGC 1 cut(s) 914
ApoI RAATTY 3 cut(s) 122, 560, 1034
ArsI GACNNNNNNTTYG 2 cut(s) 255, 287
Asp700I GAANNNNTTC 1 cut(s) 502
AspLEI GCGC 2 cut(s) 203, 491
AspS9I GGNCC 2 cut(s) 161, 1371
AsuHPI GGTGA 3 cut(s) 88, 406, 767
AvaII GGWCC 2 cut(s) 161, 1371
BauI CACGAG 1 cut(s) 775
BbrPI CACGTG 2 cut(s) 628, 639
BbsI GAAGAC 1 cut(s) 208
BbvCI CCTCAGC 1 cut(s) 1443
BbvI GCAGC 1 cut(s) 901
BccI CCATC 8 cut(s) 245, 515, 548, 932, 939, 1026, 1129, 1239
BceAI ACGGC 4 cut(s) 489, 581, 668, 965
BciT130I CCWGG 1 cut(s) 675
BcoDI GTCTC 2 cut(s) 20, 259
BfaI CTAG 2 cut(s) 486, 680
BfmI CTRYAG 1 cut(s) 909
BfoI RGCGCY 1 cut(s) 204
BisI GCNGC 6 cut(s) 42, 249, 444, 477, 492, 915
BlpI GCTNAGC 1 cut(s) 723
BlsI GCNGC 6 cut(s) 43, 250, 445, 478, 493, 916
Bme1390I CCNGG 1 cut(s) 675
Bme18I GGWCC 2 cut(s) 161, 1371
BmgT120I GGNCC 2 cut(s) 161, 1371
BmiI GGNNCC 2 cut(s) 163, 1372
BmrFI CCNGG 1 cut(s) 675
BmsI GCATC 1 cut(s) 303
BpiI GAAGAC 1 cut(s) 208
BpmI CTGGAG 1 cut(s) 644
Bpu10I CCTNAGC 1 cut(s) 1443
Bpu1102I GCTNAGC 1 cut(s) 723
BsaAI YACGTR 4 cut(s) 628, 639, 750, 1288
BsaBI GATNNNNATC 1 cut(s) 1116
BsaJI CCNNGG 1 cut(s) 1374
BsaXI ACNNNNNCTCC 4 cut(s) 839, 869, 1458, 1488
Bse118I RCCGGY 3 cut(s) 158, 221, 278
Bse1I ACTGG 1 cut(s) 661
Bse8I GATNNNNATC 1 cut(s) 1116
BseBI CCWGG 1 cut(s) 675
BseDI CCNNGG 1 cut(s) 1374
BseGI GGATG 6 cut(s) 176, 950, 975, 1018, 1250, 1407
BseJI GATNNNNATC 1 cut(s) 1116
BseMII CTCAG 3 cut(s) 224, 737, 1434
BseNI ACTGG 1 cut(s) 661
BseRI GAGGAG 1 cut(s) 1482
BseX3I CGGCCG 1 cut(s) 492
BseXI GCAGC 1 cut(s) 901
Bsh1236I CGCG 4 cut(s) 458, 491, 698, 1031
Bsh1285I CGRYCG 1 cut(s) 495
BshFI GGCC 4 cut(s) 158, 494, 596, 1262
BsiEI CGRYCG 1 cut(s) 495
BsiSI CCGG 4 cut(s) 159, 222, 279, 495
BslFI GGGAC 3 cut(s) 147, 1384, 1436
BsmAI GTCTC 2 cut(s) 20, 259
BsmBI CGTCTC 1 cut(s) 20
BsmFI GGGAC 3 cut(s) 147, 1384, 1436
BsmI GAATGC 1 cut(s) 901
BsnI GGCC 4 cut(s) 158, 494, 596, 1262
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
Bsp1720I GCTNAGC 1 cut(s) 723
BspACI CCGC 9 cut(s) 41, 44, 165, 249, 444, 476, 491, 555, 1029
BspANI GGCC 4 cut(s) 158, 494, 596, 1262
BspCNI CTCAG 3 cut(s) 223, 736, 1435
BspFNI CGCG 4 cut(s) 458, 491, 698, 1031
BspLI GGNNCC 2 cut(s) 163, 1372
BspPI GGATC 1 cut(s) 511
BsrFI RCCGGY 3 cut(s) 158, 221, 278
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 1 cut(s) 661
BssAI RCCGGY 3 cut(s) 158, 221, 278
BssECI CCNNGG 1 cut(s) 1374
BssMI GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
BssSI CACGAG 1 cut(s) 775
Bst2BI CACGAG 1 cut(s) 775
Bst2UI CCWGG 1 cut(s) 675
Bst4CI ACNGT 2 cut(s) 103, 1375
BstAUI TGTACA 1 cut(s) 732
BstBAI YACGTR 4 cut(s) 628, 639, 750, 1288
BstC8I GCNNGC 3 cut(s) 280, 1251, 1279
BstDEI CTNAG 3 cut(s) 210, 723, 1443
BstDSI CCRYGG 1 cut(s) 1374
BstF5I GGATG 6 cut(s) 176, 950, 975, 1018, 1250, 1407
BstFNI CGCG 4 cut(s) 458, 491, 698, 1031
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 2 cut(s) 203, 491
BstKTI GATC 6 cut(s) 61, 96, 389, 519, 1114, 1407
BstMAI GTCTC 2 cut(s) 20, 259
BstMBI GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
BstMCI CGRYCG 1 cut(s) 495
BstMWI GCNNNNNNNGC 7 cut(s) 164, 248, 347, 959, 1238, 1259, 1439
BstNI CCWGG 1 cut(s) 675
BstSCI CCNGG 1 cut(s) 673
BstSFI CTRYAG 1 cut(s) 909
BstUI CGCG 4 cut(s) 458, 491, 698, 1031
BstV1I GCAGC 1 cut(s) 901
BstV2I GAAGAC 1 cut(s) 208
BstZI CGGCCG 1 cut(s) 492
BsuRI GGCC 4 cut(s) 158, 494, 596, 1262
BtgI CCRYGG 1 cut(s) 1374
BtgZI GCGATG 2 cut(s) 223, 1258
BtsCI GGATG 6 cut(s) 176, 950, 975, 1018, 1250, 1407
BtsI GCAGTG 3 cut(s) 36, 1059, 1260
BtsIMutI CAGTG 4 cut(s) 36, 668, 1059, 1260
Cac8I GCNNGC 3 cut(s) 280, 1251, 1279
CfoI GCGC 2 cut(s) 203, 491
Cfr10I RCCGGY 3 cut(s) 158, 221, 278
Cfr13I GGNCC 2 cut(s) 161, 1371
CseI GACGC 4 cut(s) 37, 447, 687, 1075
Csp6I GTAC 4 cut(s) 151, 733, 747, 1321
CviAII CATG 7 cut(s) 298, 390, 514, 592, 718, 931, 1398
CviQI GTAC 4 cut(s) 151, 733, 747, 1321
DdeI CTNAG 3 cut(s) 210, 723, 1443
DpnI GATC 6 cut(s) 60, 95, 388, 518, 1113, 1406
DpnII GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
DrdI GACNNNNNNGTC 1 cut(s) 1145
DseDI GACNNNNNNGTC 1 cut(s) 1145
EaeI YGGCCR 3 cut(s) 156, 492, 594
EagI CGGCCG 1 cut(s) 492
EciI GGCGGA 1 cut(s) 59
EclXI CGGCCG 1 cut(s) 492
Eco32I GATATC 1 cut(s) 603
Eco47I GGWCC 2 cut(s) 161, 1371
Eco52I CGGCCG 1 cut(s) 492
Eco72I CACGTG 2 cut(s) 628, 639
EcoRI GAATTC 1 cut(s) 122
EcoRII CCWGG 1 cut(s) 673
EcoRV GATATC 1 cut(s) 603
Esp3I CGTCTC 1 cut(s) 20
FaeI CATG 7 cut(s) 301, 393, 517, 595, 721, 934, 1401
FaqI GGGAC 3 cut(s) 147, 1384, 1436
FatI CATG 7 cut(s) 297, 389, 513, 591, 717, 930, 1397
FauI CCCGC 1 cut(s) 172
FblI GTMKAC 1 cut(s) 78
Fnu4HI GCNGC 6 cut(s) 42, 249, 444, 477, 492, 915
FokI GGATG 6 cut(s) 163, 957, 982, 1005, 1257, 1414
Fsp4HI GCNGC 6 cut(s) 42, 249, 444, 477, 492, 915
FspBI CTAG 2 cut(s) 486, 680
GlaI GCGC 2 cut(s) 202, 490
GluI GCNGC 6 cut(s) 42, 249, 444, 477, 492, 915
GsuI CTGGAG 1 cut(s) 644
HaeII RGCGCY 1 cut(s) 204
HaeIII GGCC 4 cut(s) 158, 494, 596, 1262
HapII CCGG 4 cut(s) 159, 222, 279, 495
HgaI GACGC 4 cut(s) 37, 447, 687, 1075
HhaI GCGC 2 cut(s) 203, 491
Hin1II CATG 7 cut(s) 301, 393, 517, 595, 721, 934, 1401
Hin6I GCGC 2 cut(s) 201, 489
HinP1I GCGC 2 cut(s) 201, 489
HincII GTYRAC 3 cut(s) 79, 1270, 1365
HindII GTYRAC 3 cut(s) 79, 1270, 1365
HindIII AAGCTT 1 cut(s) 1325
HinfI GANTC 4 cut(s) 1077, 1093, 1296, 1347
HpaI GTTAAC 1 cut(s) 1270
HpaII CCGG 4 cut(s) 159, 222, 279, 495
HphI GGTGA 3 cut(s) 88, 406, 767
Hpy166II GTNNAC 7 cut(s) 79, 184, 335, 376, 733, 1270, 1365
Hpy188I TCNGA 5 cut(s) 58, 93, 1076, 1383, 1480
Hpy8I GTNNAC 7 cut(s) 79, 184, 335, 376, 733, 1270, 1365
Hpy99I CGWCG 7 cut(s) 80, 83, 107, 263, 275, 703, 1069
HpyCH4III ACNGT 2 cut(s) 103, 1375
HpyCH4IV ACGT 8 cut(s) 52, 129, 405, 627, 638, 749, 1266, 1287
HpyCH4V TGCA 6 cut(s) 382, 568, 614, 930, 1184, 1410
HpyF10VI GCNNNNNNNGC 7 cut(s) 164, 248, 347, 959, 1238, 1259, 1439
HpyF3I CTNAG 3 cut(s) 210, 723, 1443
HpySE526I ACGT 8 cut(s) 52, 129, 405, 627, 638, 749, 1266, 1287
Hsp92II CATG 7 cut(s) 301, 393, 517, 595, 721, 934, 1401
HspAI GCGC 2 cut(s) 201, 489
KroI GCCGGC 1 cut(s) 278
KroNI GCCGGC 1 cut(s) 280
KspAI GTTAAC 1 cut(s) 1270
Kzo9I GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
LmnI GCTCC 4 cut(s) 347, 663, 1010, 1238
Lsp1109I GCAGC 1 cut(s) 901
LweI GCATC 1 cut(s) 303
MaeI CTAG 2 cut(s) 486, 680
MaeII ACGT 8 cut(s) 52, 129, 405, 627, 638, 749, 1266, 1287
MaeIII GTNAC 2 cut(s) 224, 406
MalI GATC 6 cut(s) 60, 95, 388, 518, 1113, 1406
MboI GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
MboII GAAGA 4 cut(s) 53, 59, 208, 904
MluCI AATT 8 cut(s) 122, 356, 544, 560, 793, 1004, 1034, 1417
MluI ACGCGT 1 cut(s) 696
MmeI TCCRAC 2 cut(s) 575, 1234
MroNI GCCGGC 1 cut(s) 278
MroXI GAANNNNTTC 1 cut(s) 502
MseI TTAA 5 cut(s) 693, 1161, 1269, 1329, 1394
MslI CAYNNNNRTG 5 cut(s) 179, 512, 596, 716, 929
MspA1I CMGCKG 1 cut(s) 251
MspI CCGG 4 cut(s) 159, 222, 279, 495
MspR9I CCNGG 1 cut(s) 675
Mva1269I GAATGC 1 cut(s) 901
MvaI CCWGG 1 cut(s) 675
MvnI CGCG 4 cut(s) 458, 491, 698, 1031
MwoI GCNNNNNNNGC 7 cut(s) 164, 248, 347, 959, 1238, 1259, 1439
NaeI GCCGGC 1 cut(s) 280
NdeII GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
NgoMIV GCCGGC 1 cut(s) 278
NlaIII CATG 7 cut(s) 301, 393, 517, 595, 721, 934, 1401
NlaIV GGNNCC 2 cut(s) 163, 1372
NmeAIII GCCGAG 1 cut(s) 177
NmuCI GTSAC 2 cut(s) 224, 406
OliI CACNNNNGTG 1 cut(s) 179
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 267
PctI GAATGC 1 cut(s) 901
PdiI GCCGGC 1 cut(s) 280
PdmI GAANNNNTTC 1 cut(s) 502
PfeI GAWTC 4 cut(s) 1077, 1093, 1296, 1347
PkrI GCNGC 6 cut(s) 43, 250, 445, 478, 493, 916
PmaCI CACGTG 2 cut(s) 628, 639
PmlI CACGTG 2 cut(s) 628, 639
Ppu21I YACGTR 4 cut(s) 628, 639, 750, 1288
Psp1406I AACGTT 1 cut(s) 52
Psp6I CCWGG 1 cut(s) 673
PspCI CACGTG 2 cut(s) 628, 639
PspGI CCWGG 1 cut(s) 673
PspN4I GGNNCC 2 cut(s) 163, 1372
PspPI GGNCC 2 cut(s) 161, 1371
RsaI GTAC 4 cut(s) 152, 734, 748, 1322
RsaNI GTAC 4 cut(s) 151, 733, 747, 1321
RseI CAYNNNNRTG 5 cut(s) 179, 512, 596, 716, 929
SalI GTCGAC 1 cut(s) 77
SaqAI TTAA 5 cut(s) 693, 1161, 1269, 1329, 1394
SatI GCNGC 6 cut(s) 42, 249, 444, 477, 492, 915
Sau3AI GATC 6 cut(s) 58, 93, 386, 516, 1111, 1404
Sau96I GGNCC 2 cut(s) 161, 1371
ScrFI CCNGG 1 cut(s) 675
SfaNI GCATC 1 cut(s) 303
SfcI CTRYAG 1 cut(s) 909
SgrDI CGTCGACG 1 cut(s) 77
SinI GGWCC 2 cut(s) 161, 1371
SmiMI CAYNNNNRTG 5 cut(s) 179, 512, 596, 716, 929
Sse9I AATT 8 cut(s) 122, 356, 544, 560, 793, 1004, 1034, 1417
SsiI CCGC 9 cut(s) 41, 44, 165, 249, 444, 476, 491, 555, 1029
SspI AATATT 3 cut(s) 191, 501, 937
SspMI CTAG 2 cut(s) 486, 680
StyD4I CCNGG 1 cut(s) 673
TaaI ACNGT 2 cut(s) 103, 1375
TaiI ACGT 8 cut(s) 55, 132, 408, 630, 641, 752, 1269, 1290
TaqI TCGA 3 cut(s) 78, 261, 1064
TasI AATT 8 cut(s) 122, 356, 544, 560, 793, 1004, 1034, 1417
TatI WGTACW 1 cut(s) 732
TauI GCSGC 5 cut(s) 44, 251, 446, 479, 494
TfiI GAWTC 4 cut(s) 1077, 1093, 1296, 1347
Tru1I TTAA 5 cut(s) 693, 1161, 1269, 1329, 1394
Tru9I TTAA 5 cut(s) 693, 1161, 1269, 1329, 1394
TscAI CASTG 4 cut(s) 43, 668, 1059, 1260
TseFI GTSAC 2 cut(s) 224, 406
TseI GCWGC 1 cut(s) 914
Tsp45I GTSAC 2 cut(s) 224, 406
TspDTI ATGAA 6 cut(s) 700, 779, 947, 986, 1017, 1069
TspGWI ACGGA 5 cut(s) 38, 64, 169, 247, 259
TspRI CASTG 4 cut(s) 43, 668, 1059, 1260
VpaK11BI GGWCC 2 cut(s) 161, 1371
XapI RAATTY 3 cut(s) 122, 560, 1034
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 1 cut(s) 502
XspI CTAG 2 cut(s) 486, 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.