Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003189

Physical Location & Seq

Genomic Coordinates Reverse (-)

7180041 .. 7185152

Gene Structure 5112 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1102700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGCCGACAACATCCCGGATGGCAATTGTCCAAGAGGATGATCCGGTGGTGGTGCATGCCGGCGACATCCCTCCCATCGTCAGCTTCCGCGGCTTCTCCCGCCAGTTCTACAAAGAAACCAAAAAGCTATGGTACCTTGCTGGCCCAGCCATCTTCACTTCCCTTAGCCAATATTCCATAGGCGCCATCACACAGATCTTCGCCGGCCATGTGGGCACCTTAGAGCTTGCCACCGTATCTGTCGAAAACTCTGTCATAGCCGGTTTCTCTTTCGGTTTTATGTATGGCATGGGGAGTGCGCTTGAAACGTTGTGCGGGCAAGCGTTCGGAGCAGGGCAGCTGGACATGTTAGGAATCTACATGCAGAGGTCGTGGGTGATCCTCAACGCCACCGCCGTACTGCTCTCCTTTCTTTACATTTTTGCAGAGCAACTACTCAAAATGATAGGGCAGCCCGATGACATATCGAAGGCGGCGGGACAGTTCGCGATATGGATGATACCACAACTGTTCGCCTACGCCATGAACTTCCCGCTAGCCAAGTTCTTGCAGTCGCAGAGCAAGATCATGGTCATGGCAGCGATATCCGCAGTGGCTTTGGTCTTGCACACGTTGTTCAGCTGGCTTTTGACGCTCAAACTCGGGTGGGGACTGGTGGGCGCCGCCGTCGTGCTCAACACGTCCTGGTGGTTCATAGTTTTGGCTCAGTTGGTTTATATATTTTCTGGGACATGTGGTCGAGCTTGGGCTGGGTTCTCGTGGAAGGCCTTTCATAATCTTTGGGATTTTGTTAAGTTGTCTATGGCTTCTGGAATCATGCTCTGTTTGGAATGTTGGTACTTTATGGCACTAGTTCTTTTTGCTGGGTATCTGAAGAATGCGAGGGTTTCTGTGGATGGCATGTCCATATGTTTGAACATATTCGGATGGACGTTCATGGCAGCTCTTGGCATGACCACAGCTATAAGTGTGAGAGTGTCTAATGAACTAGGCGCAGCTCACCCAAGAACGGCAAAGTTCTCGTTAGTAGTGGCCCACTCATCATCACCCGGGACATATATCCGGTCTTTGTTTTCAAGCGATCTGGCGGTGAAAGCTCTCGTGAAGCATCTCACCCCATTGCTGGCGACCTGCATTGTTATAAACAGCATTCAACCAGTTCTCTCCGGGGTTGCCATTGGAGCAGGATGGCAAGCTGTAGTGGGTTATGTGAACATAGTATGCTACTATGTATTTGGGGTTCCCTTGGGCCTAATCATGGGTTACAAGCTTCACGGGGGTGTTAAGGGTATTTGGACTGGAATGCTGTTGGGGACAGTCCTTCAAACTTGTATCCTTTTTTCGATGATTTGTAAAACCAGCTGGAACAAAGAGGCATCCATAGCTGAAGACAGGATAAGGAAATGGGGAGGGCAAATAGAATCGAAAGAGAACAGAGGAGGCTATACAGATTCACAAAACAACAACGGTGGTCATAAAGATTTGGAAAAGAACGGAGACCATACAGATTCGAAAGGAAACGGCATAGAAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0015238 GO:0015893 GO:0016020 GO:0016049 GO:0021700 GO:0022622 GO:0022857 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0040007 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0060560 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098588 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

512

Amino Acids

55.7

Weight (kDa)

8.82

Isoelectric Point (pI)

30.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	49 - 209	1.1e-35	MatE
MatE	PF01554	271 - 344	8.2e-14	MatE
MatE	PF01554	353 - 418	3.8e-09	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26590 AT3G26590 AT5G38030
fragaria_vesca	FvH4_4g25500 FvH4_4g25500 FvH4_4g25510
malus_domestica	MD13G1102100.v1.1 MD16G1102700.v1.1
prunus_persica	Prupe.1G243700_v2.0.a1
pyrus_communis	pycom13g08920 pycom13g08930 pycom16g08710 pycom16g08730
rosa_chinensis	RchiOBHm_Chr4g0432851 RchiOBHm_Chr4g0432861
rosa_laevigata	RLG00000006804 RLG00000006805 RLG00000030674
rosa_multiflora	Rmu_co8449711.1_g000001 Rmu_sc0005234.1_g000013
rosa_roxburghii	Rroxscaffold_5G00374290 Rroxscaffold_5G00374300
rosa_rugosa	Rorug04G0263200 Rorug04G0263300 Rorug04G0263400 Rorug04G0263500 Rorug04G0263600
rosa_samantha	Rh4AG317500 Rh4AG317700 Rh4BG325800 Rh4CG340800 Rh4CG340900 Rh4CG341000 Rh4DG320900 Rh4DG321000
rosa_wichuraiana	Rw4G027610 Rw4G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1142
Acc36I	ACCTGC	1 cut(s)	1139
Acc65I	GGTACC	1 cut(s)	132
AccB1I	GGYRCC	4 cut(s)	132, 182, 215, 659
AccII	CGCG	2 cut(s)	90, 488
AclI	AACGTT	1 cut(s)	308
AclWI	GGATC	2 cut(s)	35, 373
AcoI	YGGCCR	1 cut(s)	205
AcuI	CTGAAG	2 cut(s)	893, 1407
AcyI	GRCGYC	2 cut(s)	183, 660
AfaI	GTAC	3 cut(s)	134, 399, 839
AfiI	CCNNNNNNNGG	3 cut(s)	1009, 1123, 1258
AflIII	ACRYGT	4 cut(s)	345, 609, 678, 731
AgsI	TTSAA	5 cut(s)	305, 916, 1077, 1154, 1325
AhdI	GACNNNNNGTC	1 cut(s)	735
AhlI	ACTAGT	1 cut(s)	850
AjiI	CACGTC	1 cut(s)	681
AjnI	CCWGG	1 cut(s)	683
AleI	CACNNNNGTG	1 cut(s)	1278
Alw21I	GWGCWC	1 cut(s)	675
Alw26I	GTCTC	1 cut(s)	1491
AlwI	GGATC	2 cut(s)	35, 373
Ama87I	CYCGRG	2 cut(s)	641, 1049
AoxI	GGCC	5 cut(s)	142, 205, 765, 1032, 1249
ApeKI	GCWGC	5 cut(s)	337, 451, 578, 941, 995
ArsI	GACNNNNNNTTYG	2 cut(s)	237, 269
Asp700I	GAANNNNTTC	1 cut(s)	920
Asp718I	GGTACC	1 cut(s)	132
AspLEI	GCGC	4 cut(s)	185, 301, 662, 995
AspS9I	GGNCC	3 cut(s)	143, 1033, 1249
AsuC2I	CCSGG	4 cut(s)	16, 1050, 1051, 1168
AsuHPI	GGTGA	5 cut(s)	388, 992, 1038, 1102, 1105
AsuII	TTCGAA	1 cut(s)	1511
AsuNHI	GCTAGC	1 cut(s)	535
AvaI	CYCGRG	2 cut(s)	641, 1049
BaeGI	GKGCMC	1 cut(s)	218
BanI	GGYRCC	4 cut(s)	132, 182, 215, 659
BauI	CACGAG	2 cut(s)	757, 1100
BbsI	GAAGAC	1 cut(s)	1395
Bbv12I	GWGCWC	1 cut(s)	675
BbvI	GCAGC	5 cut(s)	349, 463, 590, 953, 1007
BccI	CCATC	7 cut(s)	13, 83, 158, 194, 890, 921, 1182
BceAI	ACGGC	3 cut(s)	380, 650, 1026
BcgI	CGANNNNNNTGC	2 cut(s)	1002, 1036
BciT130I	CCWGG	1 cut(s)	685
BciVI	GTATCC	1 cut(s)	1343
BcnI	CCSGG	4 cut(s)	16, 1050, 1051, 1168
BcoDI	GTCTC	1 cut(s)	1491
BcuI	ACTAGT	1 cut(s)	850
BfaI	CTAG	3 cut(s)	536, 851, 989
BfmI	CTRYAG	1 cut(s)	1197
BfoI	RGCGCY	2 cut(s)	186, 663
BfuAI	ACCTGC	1 cut(s)	1139
BfuI	GTATCC	1 cut(s)	1343
BglI	GCCNNNNNGGC	1 cut(s)	213
BglII	AGATCT	1 cut(s)	195
BisI	GCNGC	8 cut(s)	91, 338, 452, 474, 579, 663, 942, 996
BlsI	GCNGC	8 cut(s)	92, 339, 453, 475, 580, 664, 943, 997
Bme1390I	CCNGG	5 cut(s)	16, 685, 1050, 1051, 1168
BmeRI	GACNNNNNGTC	1 cut(s)	735
BmeT110I	CYCGRG	2 cut(s)	641, 1049
BmgBI	CACGTC	1 cut(s)	681
BmgT120I	GGNCC	3 cut(s)	143, 1033, 1249
BmiI	GGNNCC	5 cut(s)	134, 184, 217, 661, 1242
BmrFI	CCNGG	5 cut(s)	16, 685, 1050, 1051, 1168
BmsI	GCATC	2 cut(s)	1117, 1385
BmtI	GCTAGC	1 cut(s)	539
BpiI	GAAGAC	1 cut(s)	1395
Bpu10I	CCTNAGC	1 cut(s)	164
Bpu14I	TTCGAA	1 cut(s)	1511
BpuMI	CCSGG	4 cut(s)	16, 1050, 1051, 1168
BsaHI	GRCGYC	2 cut(s)	183, 660
BsaI	GGTCTC	1 cut(s)	1491
BsaJI	CCNNGG	4 cut(s)	88, 1049, 1167, 1245
BsaWI	WCCGGW	2 cut(s)	43, 1062
Bsc4I	CCNNNNNNNGG	3 cut(s)	1009, 1123, 1258
Bse118I	RCCGGY	3 cut(s)	59, 203, 260
Bse1I	ACTGG	4 cut(s)	103, 657, 1157, 1303
Bse3DI	GCAATG	1 cut(s)	1118
BseBI	CCWGG	1 cut(s)	685
BseDI	CCNNGG	4 cut(s)	88, 1049, 1167, 1245
BseGI	GGATG	9 cut(s)	11, 24, 43, 66, 501, 901, 932, 1193, 1376
BseLI	CCNNNNNNNGG	3 cut(s)	1009, 1123, 1258
BseMI	GCAATG	1 cut(s)	1118
BseMII	CTCAG	1 cut(s)	719
BseNI	ACTGG	4 cut(s)	103, 657, 1157, 1303
BseRI	GAGGAG	1 cut(s)	1452
BseSI	GKGCMC	1 cut(s)	218
BseXI	GCAGC	5 cut(s)	349, 463, 590, 953, 1007
BseYI	CCCAGC	3 cut(s)	145, 749, 863
Bsh1236I	CGCG	2 cut(s)	90, 488
BshFI	GGCC	5 cut(s)	144, 207, 767, 1034, 1251
BshNI	GGYRCC	4 cut(s)	132, 182, 215, 659
BsiHKAI	GWGCWC	1 cut(s)	675
BsiHKCI	CYCGRG	2 cut(s)	641, 1049
BsiSI	CCGG	8 cut(s)	16, 44, 60, 204, 261, 1050, 1063, 1167
BslFI	GGGAC	5 cut(s)	492, 663, 742, 1066, 1327
BslI	CCNNNNNNNGG	3 cut(s)	1009, 1123, 1258
BsmAI	GTCTC	1 cut(s)	1491
BsmFI	GGGAC	5 cut(s)	492, 663, 742, 1066, 1327
BsmI	GAATGC	3 cut(s)	883, 1149, 1308
BsnI	GGCC	5 cut(s)	144, 207, 767, 1034, 1251
Bso31I	GGTCTC	1 cut(s)	1491
BsoBI	CYCGRG	2 cut(s)	641, 1049
Bsp119I	TTCGAA	1 cut(s)	1511
Bsp1286I	GDGCHC	2 cut(s)	218, 675
Bsp143I	GATC	5 cut(s)	40, 195, 378, 564, 1081
Bsp68I	TCGCGA	1 cut(s)	488
BspANI	GGCC	5 cut(s)	144, 207, 767, 1034, 1251
BspCNI	CTCAG	1 cut(s)	718
BspFNI	CGCG	2 cut(s)	90, 488
BspLI	GGNNCC	5 cut(s)	134, 184, 217, 661, 1242
BspMI	ACCTGC	1 cut(s)	1139
BspOI	GCTAGC	1 cut(s)	539
BspPI	GGATC	2 cut(s)	35, 373
BspT104I	TTCGAA	1 cut(s)	1511
BspT107I	GGYRCC	4 cut(s)	132, 182, 215, 659
BspTNI	GGTCTC	1 cut(s)	1491
BsrDI	GCAATG	1 cut(s)	1118
BsrFI	RCCGGY	3 cut(s)	59, 203, 260
BsrI	ACTGG	4 cut(s)	103, 657, 1157, 1303
BssAI	RCCGGY	3 cut(s)	59, 203, 260
BssECI	CCNNGG	4 cut(s)	88, 1049, 1167, 1245
BssMI	GATC	5 cut(s)	40, 195, 378, 564, 1081
BssNI	GRCGYC	2 cut(s)	183, 660
BssSI	CACGAG	2 cut(s)	757, 1100
BssT1I	CCWWGG	1 cut(s)	1245
Bst2BI	CACGAG	2 cut(s)	757, 1100
Bst2UI	CCWGG	1 cut(s)	685
Bst4CI	ACNGT	5 cut(s)	235, 483, 510, 1318, 1469
BstACI	GRCGYC	2 cut(s)	183, 660
BstBI	TTCGAA	1 cut(s)	1511
BstDEI	CTNAG	3 cut(s)	164, 220, 705
BstDSI	CCRYGG	1 cut(s)	88
BstF5I	GGATG	9 cut(s)	11, 24, 43, 66, 501, 901, 932, 1193, 1376
BstFNI	CGCG	2 cut(s)	90, 488
BstH2I	RGCGCY	2 cut(s)	186, 663
BstHHI	GCGC	4 cut(s)	185, 301, 662, 995
BstKTI	GATC	5 cut(s)	43, 198, 381, 567, 1084
BstMAI	GTCTC	1 cut(s)	1491
BstMBI	GATC	5 cut(s)	40, 195, 378, 564, 1081
BstNI	CCWGG	1 cut(s)	685
BstNSI	RCATGY	5 cut(s)	59, 349, 364, 735, 904
BstSCI	CCNGG	5 cut(s)	14, 683, 1048, 1049, 1166
BstSFI	CTRYAG	1 cut(s)	1197
BstSLI	GKGCMC	1 cut(s)	218
BstUI	CGCG	2 cut(s)	90, 488
BstV1I	GCAGC	5 cut(s)	349, 463, 590, 953, 1007
BstV2I	GAAGAC	1 cut(s)	1395
BstX2I	RGATCY	1 cut(s)	195
BstYI	RGATCY	1 cut(s)	195
BsuI	GTATCC	1 cut(s)	1343
BsuRI	GGCC	5 cut(s)	144, 207, 767, 1034, 1251
BtgI	CCRYGG	1 cut(s)	88
BtrI	CACGTC	1 cut(s)	681
BtsCI	GGATG	9 cut(s)	11, 24, 43, 66, 501, 901, 932, 1193, 1376
BtsI	GCAGTG	1 cut(s)	597
BtsIMutI	CAGTG	1 cut(s)	597
BtuMI	TCGCGA	1 cut(s)	488
BveI	ACCTGC	1 cut(s)	1139
CfoI	GCGC	4 cut(s)	185, 301, 662, 995
Cfr10I	RCCGGY	3 cut(s)	59, 203, 260
Cfr13I	GGNCC	3 cut(s)	143, 1033, 1249
Cfr42I	CCGCGG	1 cut(s)	91
Cfr9I	CCCGGG	1 cut(s)	1049
CseI	GACGC	1 cut(s)	640
Csp6I	GTAC	3 cut(s)	133, 398, 838
CspCI	CAANNNNNGTGG	2 cut(s)	1450, 1485
CviQI	GTAC	3 cut(s)	133, 398, 838
DdeI	CTNAG	3 cut(s)	164, 220, 705
DinI	GGCGCC	2 cut(s)	184, 661
DpnI	GATC	5 cut(s)	42, 197, 380, 566, 1083
DpnII	GATC	5 cut(s)	40, 195, 378, 564, 1081
DriI	GACNNNNNGTC	1 cut(s)	735
EaeI	YGGCCR	1 cut(s)	205
Eam1105I	GACNNNNNGTC	1 cut(s)	735
Eco130I	CCWWGG	1 cut(s)	1245
Eco147I	AGGCCT	1 cut(s)	767
Eco31I	GGTCTC	1 cut(s)	1491
Eco32I	GATATC	1 cut(s)	585
Eco57I	CTGAAG	2 cut(s)	893, 1407
Eco88I	CYCGRG	2 cut(s)	641, 1049
EcoRII	CCWGG	1 cut(s)	683
EcoRV	GATATC	1 cut(s)	585
EcoT14I	CCWWGG	1 cut(s)	1245
EgeI	GGCGCC	2 cut(s)	184, 661
EheI	GGCGCC	2 cut(s)	184, 661
ErhI	CCWWGG	1 cut(s)	1245
FaqI	GGGAC	5 cut(s)	492, 663, 742, 1066, 1327
FauI	CCCGC	4 cut(s)	107, 308, 469, 540
FauNDI	CATATG	1 cut(s)	908
Fnu4HI	GCNGC	8 cut(s)	91, 338, 452, 474, 579, 663, 942, 996
FokI	GGATG	8 cut(s)	31, 50, 53, 508, 908, 939, 1200, 1363
Fsp4HI	GCNGC	8 cut(s)	91, 338, 452, 474, 579, 663, 942, 996
FspBI	CTAG	3 cut(s)	536, 851, 989
GlaI	GCGC	4 cut(s)	184, 300, 661, 994
GluI	GCNGC	8 cut(s)	91, 338, 452, 474, 579, 663, 942, 996
GsaI	CCCAGC	3 cut(s)	149, 753, 867
HaeII	RGCGCY	2 cut(s)	186, 663
HaeIII	GGCC	5 cut(s)	144, 207, 767, 1034, 1251
HapII	CCGG	8 cut(s)	16, 44, 60, 204, 261, 1050, 1063, 1167
HgaI	GACGC	1 cut(s)	640
HhaI	GCGC	4 cut(s)	185, 301, 662, 995
Hin1I	GRCGYC	2 cut(s)	183, 660
Hin6I	GCGC	4 cut(s)	183, 299, 660, 993
HinP1I	GCGC	4 cut(s)	183, 299, 660, 993
HindIII	AAGCTT	1 cut(s)	1268
HinfI	GANTC	5 cut(s)	354, 813, 1421, 1451, 1508
HpaII	CCGG	8 cut(s)	16, 44, 60, 204, 261, 1050, 1063, 1167
HphI	GGTGA	5 cut(s)	388, 992, 1038, 1102, 1105
Hpy166II	GTNNAC	1 cut(s)	1213
Hpy188I	TCNGA	3 cut(s)	329, 873, 926
Hpy188III	TCNNGA	3 cut(s)	487, 810, 1102
Hpy8I	GTNNAC	1 cut(s)	1213
Hpy99I	CGWCG	1 cut(s)	671
HpyAV	CCTTC	3 cut(s)	463, 757, 1331
HpyCH4III	ACNGT	5 cut(s)	235, 483, 510, 1318, 1469
HpyCH4IV	ACGT	4 cut(s)	308, 611, 680, 932
HpyCH4V	TGCA	6 cut(s)	55, 364, 425, 550, 607, 1134
HpyF3I	CTNAG	3 cut(s)	164, 220, 705
HpySE526I	ACGT	4 cut(s)	308, 611, 680, 932
Hsp92I	GRCGYC	2 cut(s)	183, 660
HspAI	GCGC	4 cut(s)	183, 299, 660, 993
KasI	GGCGCC	2 cut(s)	182, 659
KpnI	GGTACC	1 cut(s)	136
KroI	GCCGGC	2 cut(s)	59, 203
KroNI	GCCGGC	2 cut(s)	61, 205
KspI	CCGCGG	1 cut(s)	91
Kzo9I	GATC	5 cut(s)	40, 195, 378, 564, 1081
LmnI	GCTCC	2 cut(s)	329, 1181
Lsp1109I	GCAGC	5 cut(s)	349, 463, 590, 953, 1007
LweI	GCATC	2 cut(s)	1117, 1385
MaeI	CTAG	3 cut(s)	536, 851, 989
MaeII	ACGT	4 cut(s)	308, 611, 680, 932
MaeIII	GTNAC	1 cut(s)	1262
MalI	GATC	5 cut(s)	42, 197, 380, 566, 1083
MboI	GATC	5 cut(s)	40, 195, 378, 564, 1081
MboII	GAAGA	4 cut(s)	145, 190, 886, 1400
MfeI	CAATTG	1 cut(s)	24
MflI	RGATCY	1 cut(s)	195
MhlI	GDGCHC	2 cut(s)	218, 675
MluCI	AATT	2 cut(s)	24, 1531
Mly113I	GGCGCC	2 cut(s)	183, 660
MnlI	CCTC	9 cut(s)	28, 81, 360, 392, 876, 1366, 1403, 1430, 1433
MroNI	GCCGGC	2 cut(s)	59, 203
MroXI	GAANNNNTTC	1 cut(s)	920
MseI	TTAA	2 cut(s)	792, 1284
MslI	CAYNNNNRTG	2 cut(s)	572, 1278
MspA1I	CMGCKG	4 cut(s)	90, 340, 621, 1362
MspI	CCGG	8 cut(s)	16, 44, 60, 204, 261, 1050, 1063, 1167
MspR9I	CCNGG	5 cut(s)	16, 685, 1050, 1051, 1168
MunI	CAATTG	1 cut(s)	24
Mva1269I	GAATGC	3 cut(s)	883, 1149, 1308
MvaI	CCWGG	1 cut(s)	685
MvnI	CGCG	2 cut(s)	90, 488
NaeI	GCCGGC	2 cut(s)	61, 205
NarI	GGCGCC	2 cut(s)	183, 660
NciI	CCSGG	4 cut(s)	16, 1050, 1051, 1168
NdeI	CATATG	1 cut(s)	908
NdeII	GATC	5 cut(s)	40, 195, 378, 564, 1081
NgoMIV	GCCGGC	2 cut(s)	59, 203
NheI	GCTAGC	1 cut(s)	535
NlaIV	GGNNCC	5 cut(s)	134, 184, 217, 661, 1242
NruI	TCGCGA	1 cut(s)	488
NspI	RCATGY	5 cut(s)	59, 349, 364, 735, 904
NspV	TTCGAA	1 cut(s)	1511
OliI	CACNNNNGTG	1 cut(s)	1278
PaeI	GCATGC	1 cut(s)	59
PceI	AGGCCT	1 cut(s)	767
PciI	ACATGT	2 cut(s)	345, 731
PcsI	WCGNNNNNNNCGW	1 cut(s)	393
PctI	GAATGC	3 cut(s)	883, 1149, 1308
PdiI	GCCGGC	2 cut(s)	61, 205
PdmI	GAANNNNTTC	1 cut(s)	920
PfeI	GAWTC	5 cut(s)	354, 813, 1421, 1451, 1508
PfoI	TCCNGGA	1 cut(s)	14
PkrI	GCNGC	8 cut(s)	92, 339, 453, 475, 580, 664, 943, 997
PluTI	GGCGCC	2 cut(s)	186, 663
PscI	ACATGT	2 cut(s)	345, 731
PsiI	TTATAA	1 cut(s)	1142
Psp1406I	AACGTT	1 cut(s)	308
Psp6I	CCWGG	1 cut(s)	683
PspFI	CCCAGC	3 cut(s)	145, 749, 863
PspGI	CCWGG	1 cut(s)	683
PspN4I	GGNNCC	5 cut(s)	134, 184, 217, 661, 1242
PspPI	GGNCC	3 cut(s)	143, 1033, 1249
PsrI	GAACNNNNNNTAC	2 cut(s)	1224, 1256
PsuI	RGATCY	1 cut(s)	195
PvuII	CAGCTG	3 cut(s)	340, 621, 1362
RruI	TCGCGA	1 cut(s)	488
RsaI	GTAC	3 cut(s)	134, 399, 839
RsaNI	GTAC	3 cut(s)	133, 398, 838
RseI	CAYNNNNRTG	2 cut(s)	572, 1278
SacII	CCGCGG	1 cut(s)	91
SaqAI	TTAA	2 cut(s)	792, 1284
SatI	GCNGC	8 cut(s)	91, 338, 452, 474, 579, 663, 942, 996
Sau3AI	GATC	5 cut(s)	40, 195, 378, 564, 1081
Sau96I	GGNCC	3 cut(s)	143, 1033, 1249
ScrFI	CCNGG	5 cut(s)	16, 685, 1050, 1051, 1168
SduI	GDGCHC	2 cut(s)	218, 675
SfaNI	GCATC	2 cut(s)	1117, 1385
SfcI	CTRYAG	1 cut(s)	1197
SfoI	GGCGCC	2 cut(s)	184, 661
Sfr303I	CCGCGG	1 cut(s)	91
SfuI	TTCGAA	1 cut(s)	1511
SgrBI	CCGCGG	1 cut(s)	91
SmaI	CCCGGG	1 cut(s)	1051
SmiMI	CAYNNNNRTG	2 cut(s)	572, 1278
SpeI	ACTAGT	1 cut(s)	850
SphI	GCATGC	1 cut(s)	59
Sse9I	AATT	2 cut(s)	24, 1531
SseBI	AGGCCT	1 cut(s)	767
SspDI	GGCGCC	2 cut(s)	182, 659
SspI	AATATT	1 cut(s)	173
SspMI	CTAG	3 cut(s)	536, 851, 989
StuI	AGGCCT	1 cut(s)	767
StyD4I	CCNGG	5 cut(s)	14, 683, 1048, 1049, 1166
StyI	CCWWGG	1 cut(s)	1245
TaaI	ACNGT	5 cut(s)	235, 483, 510, 1318, 1469
TaiI	ACGT	4 cut(s)	311, 614, 683, 935
TaqI	TCGA	6 cut(s)	243, 467, 739, 1343, 1424, 1511
TasI	AATT	2 cut(s)	24, 1531
TauI	GCSGC	3 cut(s)	93, 476, 665
TfiI	GAWTC	5 cut(s)	354, 813, 1421, 1451, 1508
Tru1I	TTAA	2 cut(s)	792, 1284
Tru9I	TTAA	2 cut(s)	792, 1284
TscAI	CASTG	1 cut(s)	597
TseI	GCWGC	5 cut(s)	337, 451, 578, 941, 995
TspDTI	ATGAA	5 cut(s)	539, 682, 761, 925, 999
TspGWI	ACGGA	1 cut(s)	1509
TspMI	CCCGGG	1 cut(s)	1049
TspRI	CASTG	1 cut(s)	597
XceI	RCATGY	5 cut(s)	59, 349, 364, 735, 904
XmaI	CCCGGG	1 cut(s)	1049
XmnI	GAANNNNTTC	1 cut(s)	920
XspI	CTAG	3 cut(s)	536, 851, 989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.