Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0003189

Physical Location & Seq

Genomic Coordinates Forward (+)

55368501 .. 55382484

Gene Structure 13984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00374300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGCCAGTACTCTCTCGGCGCCGTCACTCAAGTCTTCGCCGGCCAGGTCAGCACCTCGACCTCGCCGCCTTCTCCGTCGAGAATTCGGTCATCGCTGGGTTCTGCTTCGGCGCTTTGCTCGGCATGGGGAGTGCGCTTGAAACGCTGTGCGGCCAAGCGGTAGGAGCCGGACAGCTGGACATGTTAGGAATCTACATGCAAAGGTCGTGGGTGATCCTCAACGCCACCAGCGTAGTGTTGTGCTTTCTGTACATTTTTGCTCAGCAGATTCTGTACGGAATAGGACAGACGGCGGAGATATCCAAGGCGGCGGGGGTGTTCGCCATATACATGATACCGCAACTGTTTGCGTACGCTATGGTTTTTCCGTTGGCCAAGTTTCTGCAGTCGCAGAGCAAGATGATGGTGATGGCGGTGATCGCGGCGGTGACGCTGATATTGCACACGGTGTTCAGCTGGCTACTGATGTTGAAGCTCGGGTGGGGCCTGGTGGGAGCGGCGGTGGTGCTAAACGCGTCGTGGTGGATCATAGTGGTTTCTCAGATGGTGTACATTTTTTCCGGGACTTGTGGTCGGGCGTGGACTGGTTTCTCATGGAAGGCCTTCCATGGTCTGTGGGCGTTTGTTAAGTTGTCTCTTGCGTCGGCAGTCATGCTCTGTTTGGAAGTTTGGTATTTTATGGCGTTGATTCTCTTTGCTGGATATCTAAAGAATGCAGAAGTTTCTGTGGACGGCCTATCCATATGCATGAACATATTGGGATGGACAATCATGATGTCTTTTGGCATGAATGCAGCAATAAGTGTGAGGGTATCGAATGAACTAGGAGCAGGACATCCAAGAACAGCAAAGTTCTCACTAGTTGTGGCTGTAATAACATCATTTTTCATTGGTGTTCTCCTCTCACTCGTCCTCATACTCAGCAGAAACGAATATCCAGCCTTGTTTTCAAGTGATTCAGATGTTCAAGCGCTCGTGGTGCAGCTCACTCCCTTGCTGGCAACCTGCATTGTCATCAATAACATTCAACCTGTACTCTCTGGTGTTGCAATTGGAGCAGGATGGCAAGCTTTTGTGGCTTATGTCAACATAGGCTGTTACTATTTACTTGGGGTACCATTGGGTTTACTCTTTGGGTACAAATTTGACTGGGGTGTTATGGGGATTTGGATCGGAATGCTGTTAGGGACAGTTCTTCAGACCTGTGTCCTTTTCTATTTGGTTTATAAGACCAACTGGAACAAAGAGGCTTCTATAGCTGAAGACAGGATAAGGAAATGGGGAGGCCAATCAGACAATCCCAAAGACACGGAGAATAATGGCGCAAAAGTTTTGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0015238 GO:0015893 GO:0016020 GO:0016049 GO:0021700 GO:0022622 GO:0022857 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0040007 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0060560 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098588 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

446

Amino Acids

48.72

Weight (kDa)

8.89

Isoelectric Point (pI)

35.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	20 - 154	1.1e-25	MatE
MatE	PF01554	215 - 376	4.1e-32	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26590 AT3G26590 AT5G38030
fragaria_vesca	FvH4_4g25500 FvH4_4g25500 FvH4_4g25510
malus_domestica	MD13G1102100.v1.1 MD16G1102700.v1.1
prunus_persica	Prupe.1G243700_v2.0.a1
pyrus_communis	pycom13g08920 pycom13g08930 pycom16g08710 pycom16g08730
rosa_chinensis	RchiOBHm_Chr4g0432851 RchiOBHm_Chr4g0432861
rosa_laevigata	RLG00000006804 RLG00000006805 RLG00000030674
rosa_multiflora	Rmu_co8449711.1_g000001 Rmu_sc0005234.1_g000013
rosa_roxburghii	Rroxscaffold_5G00374290 Rroxscaffold_5G00374300
rosa_rugosa	Rorug04G0263200 Rorug04G0263300 Rorug04G0263400 Rorug04G0263500 Rorug04G0263600
rosa_samantha	Rh4AG317500 Rh4AG317700 Rh4BG325800 Rh4CG340800 Rh4CG340900 Rh4CG341000 Rh4DG320900 Rh4DG321000
rosa_wichuraiana	Rw4G027610 Rw4G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1227
Acc36I	ACCTGC	1 cut(s)	1013
Acc65I	GGTACC	1 cut(s)	1114
AccB1I	GGYRCC	2 cut(s)	18, 1114
AccBSI	CCGCTC	1 cut(s)	497
AccII	CGCG	2 cut(s)	422, 515
AclWI	GGATC	3 cut(s)	208, 533, 1178
AcoI	YGGCCR	3 cut(s)	41, 151, 372
AcsI	RAATTY	2 cut(s)	82, 1142
AcuI	CTGAAG	2 cut(s)	1181, 1281
AcyI	GRCGYC	1 cut(s)	19
AdeI	CACNNNGTG	1 cut(s)	448
AfaI	GTAC	8 cut(s)	9, 251, 275, 353, 551, 1035, 1116, 1139
AfeI	AGCGCT	1 cut(s)	972
AflIII	ACRYGT	2 cut(s)	180, 513
AgsI	TTSAA	5 cut(s)	140, 472, 951, 968, 1028
AhdI	GACNNNNNGTC	1 cut(s)	570
AhlI	ACTAGT	1 cut(s)	859
AjnI	CCWGG	2 cut(s)	43, 486
AluBI	AGCT	6 cut(s)	175, 456, 475, 985, 1070, 1259
AluI	AGCT	6 cut(s)	175, 456, 475, 985, 1070, 1259
Alw26I	GTCTC	1 cut(s)	639
AlwI	GGATC	3 cut(s)	208, 533, 1178
AlwNI	CAGNNNCTG	1 cut(s)	271
Ama87I	CYCGRG	1 cut(s)	476
Aor51HI	AGCGCT	1 cut(s)	972
AoxI	GGCC	7 cut(s)	41, 151, 372, 484, 600, 733, 1285
ApeKI	GCWGC	2 cut(s)	794, 982
ApoI	RAATTY	2 cut(s)	82, 1142
Asp700I	GAANNNNTTC	1 cut(s)	602
Asp718I	GGTACC	1 cut(s)	1114
AspLEI	GCGC	5 cut(s)	21, 113, 136, 973, 1325
AspS9I	GGNCC	1 cut(s)	484
AsuC2I	CCSGG	1 cut(s)	562
AsuHPI	GGTGA	4 cut(s)	223, 418, 427, 439
AvaI	CYCGRG	1 cut(s)	476
BalI	TGGCCA	1 cut(s)	374
BanI	GGYRCC	2 cut(s)	18, 1114
BauI	CACGAG	1 cut(s)	974
BbsI	GAAGAC	2 cut(s)	26, 1269
BbvI	GCAGC	2 cut(s)	806, 994
BccI	CCATC	5 cut(s)	397, 403, 538, 756, 1056
BceAI	ACGGC	3 cut(s)	6, 306, 748
BciT130I	CCWGG	2 cut(s)	45, 488
BcnI	CCSGG	1 cut(s)	562
BcoDI	GTCTC	1 cut(s)	639
BcuI	ACTAGT	1 cut(s)	859
BfaI	CTAG	2 cut(s)	824, 860
BfmI	CTRYAG	2 cut(s)	383, 1254
BfoI	RGCGCY	3 cut(s)	22, 114, 974
BfuAI	ACCTGC	1 cut(s)	1013
BisI	GCNGC	7 cut(s)	66, 151, 309, 423, 498, 795, 983
BlpI	GCTNAGC	1 cut(s)	261
BlsI	GCNGC	7 cut(s)	67, 152, 310, 424, 499, 796, 984
BmcAI	AGTACT	1 cut(s)	9
Bme1390I	CCNGG	3 cut(s)	45, 488, 562
BmeRI	GACNNNNNGTC	1 cut(s)	570
BmeT110I	CYCGRG	1 cut(s)	476
BmgT120I	GGNCC	1 cut(s)	484
BmiI	GGNNCC	4 cut(s)	20, 166, 485, 1116
BmrFI	CCNGG	3 cut(s)	45, 488, 562
BmrI	ACTGGG	1 cut(s)	1159
BmuI	ACTGGG	1 cut(s)	1159
BoxI	GACNNNNGTC	1 cut(s)	1205
BpiI	GAAGAC	2 cut(s)	26, 1269
Bpu1102I	GCTNAGC	1 cut(s)	261
BpuEI	CTTGAG	1 cut(s)	13
BpuMI	CCSGG	1 cut(s)	562
BsaBI	GATNNNNATC	1 cut(s)	1169
BsaHI	GRCGYC	1 cut(s)	19
BsaJI	CCNNGG	2 cut(s)	303, 607
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bse118I	RCCGGY	1 cut(s)	39
Bse1I	ACTGG	4 cut(s)	5, 589, 1154, 1241
Bse8I	GATNNNNATC	1 cut(s)	1169
BseBI	CCWGG	2 cut(s)	45, 488
BseDI	CCNNGG	2 cut(s)	303, 607
BseGI	GGATG	3 cut(s)	767, 835, 1067
BseJI	GATNNNNATC	1 cut(s)	1169
BseMII	CTCAG	3 cut(s)	275, 554, 934
BseNI	ACTGG	4 cut(s)	5, 589, 1154, 1241
BseRI	GAGGAG	1 cut(s)	890
BseXI	GCAGC	2 cut(s)	806, 994
BseYI	CCCAGC	1 cut(s)	95
BsgI	GTGCAG	1 cut(s)	1001
Bsh1236I	CGCG	2 cut(s)	422, 515
BshFI	GGCC	7 cut(s)	43, 153, 374, 486, 602, 735, 1287
BshNI	GGYRCC	2 cut(s)	18, 1114
BsiHKCI	CYCGRG	1 cut(s)	476
BsiSI	CCGG	3 cut(s)	40, 168, 561
BsiWI	CGTACG	1 cut(s)	351
BslFI	GGGAC	2 cut(s)	577, 1201
BsmAI	GTCTC	1 cut(s)	639
BsmFI	GGGAC	2 cut(s)	577, 1201
BsmI	GAATGC	3 cut(s)	718, 796, 1182
BsnI	GGCC	7 cut(s)	43, 153, 374, 486, 602, 735, 1287
BsoBI	CYCGRG	1 cut(s)	476
Bsp1407I	TGTACA	2 cut(s)	249, 549
Bsp143I	GATC	4 cut(s)	213, 417, 525, 1170
Bsp1720I	GCTNAGC	1 cut(s)	261
Bsp19I	CCATGG	1 cut(s)	607
BspANI	GGCC	7 cut(s)	43, 153, 374, 486, 602, 735, 1287
BspCNI	CTCAG	3 cut(s)	274, 553, 933
BspFNI	CGCG	2 cut(s)	422, 515
BspHI	TCATGA	1 cut(s)	771
BspLI	GGNNCC	4 cut(s)	20, 166, 485, 1116
BspMAI	CTGCAG	1 cut(s)	387
BspMI	ACCTGC	1 cut(s)	1013
BspPI	GGATC	3 cut(s)	208, 533, 1178
BspT107I	GGYRCC	2 cut(s)	18, 1114
BsrBI	CCGCTC	1 cut(s)	497
BsrFI	RCCGGY	1 cut(s)	39
BsrGI	TGTACA	2 cut(s)	249, 549
BsrI	ACTGG	4 cut(s)	5, 589, 1154, 1241
BssAI	RCCGGY	1 cut(s)	39
BssECI	CCNNGG	2 cut(s)	303, 607
BssMI	GATC	4 cut(s)	213, 417, 525, 1170
BssNI	GRCGYC	1 cut(s)	19
BssSI	CACGAG	1 cut(s)	974
BssT1I	CCWWGG	2 cut(s)	303, 607
Bst2BI	CACGAG	1 cut(s)	974
Bst2UI	CCWGG	2 cut(s)	45, 488
Bst4CI	ACNGT	3 cut(s)	345, 448, 1192
BstACI	GRCGYC	1 cut(s)	19
BstAUI	TGTACA	2 cut(s)	249, 549
BstC8I	GCNNGC	4 cut(s)	41, 458, 999, 1068
BstDEI	CTNAG	3 cut(s)	261, 540, 920
BstDSI	CCRYGG	1 cut(s)	607
BstF5I	GGATG	3 cut(s)	767, 835, 1067
BstFNI	CGCG	2 cut(s)	422, 515
BstH2I	RGCGCY	3 cut(s)	22, 114, 974
BstHHI	GCGC	5 cut(s)	21, 113, 136, 973, 1325
BstKTI	GATC	4 cut(s)	216, 420, 528, 1173
BstMAI	GTCTC	1 cut(s)	639
BstMBI	GATC	4 cut(s)	213, 417, 525, 1170
BstMWI	GCNNNNNNNGC	9 cut(s)	49, 142, 164, 419, 439, 979, 1055, 1076, 1256
BstNI	CCWGG	2 cut(s)	45, 488
BstNSI	RCATGY	2 cut(s)	184, 199
BstPAI	GACNNNNGTC	1 cut(s)	1205
BstSCI	CCNGG	3 cut(s)	43, 486, 560
BstSFI	CTRYAG	2 cut(s)	383, 1254
BstUI	CGCG	2 cut(s)	422, 515
BstV1I	GCAGC	2 cut(s)	806, 994
BstV2I	GAAGAC	2 cut(s)	26, 1269
BsuRI	GGCC	7 cut(s)	43, 153, 374, 486, 602, 735, 1287
BtgI	CCRYGG	1 cut(s)	607
BtgZI	GCGATG	1 cut(s)	76
BtsCI	GGATG	3 cut(s)	767, 835, 1067
BveI	ACCTGC	1 cut(s)	1013
Cac8I	GCNNGC	4 cut(s)	41, 458, 999, 1068
CaiI	CAGNNNCTG	1 cut(s)	271
CciI	TCATGA	1 cut(s)	771
CfoI	GCGC	5 cut(s)	21, 113, 136, 973, 1325
Cfr10I	RCCGGY	1 cut(s)	39
Cfr13I	GGNCC	1 cut(s)	484
CseI	GACGC	3 cut(s)	439, 504, 630
Csp6I	GTAC	8 cut(s)	8, 250, 274, 352, 550, 1034, 1115, 1138
CspCI	CAANNNNNGTGG	2 cut(s)	188, 223
CviQI	GTAC	8 cut(s)	8, 250, 274, 352, 550, 1034, 1115, 1138
DdeI	CTNAG	3 cut(s)	261, 540, 920
DinI	GGCGCC	1 cut(s)	20
DpnI	GATC	4 cut(s)	215, 419, 527, 1172
DpnII	GATC	4 cut(s)	213, 417, 525, 1170
DraIII	CACNNNGTG	1 cut(s)	448
DriI	GACNNNNNGTC	1 cut(s)	570
EaeI	YGGCCR	3 cut(s)	41, 151, 372
Eam1105I	GACNNNNNGTC	1 cut(s)	570
EciI	GGCGGA	1 cut(s)	308
Eco130I	CCWWGG	2 cut(s)	303, 607
Eco147I	AGGCCT	1 cut(s)	602
Eco32I	GATATC	2 cut(s)	300, 704
Eco47III	AGCGCT	1 cut(s)	972
Eco57I	CTGAAG	2 cut(s)	1181, 1281
Eco88I	CYCGRG	1 cut(s)	476
EcoO109I	RGGNCCY	1 cut(s)	484
EcoRI	GAATTC	1 cut(s)	82
EcoRII	CCWGG	2 cut(s)	43, 486
EcoRV	GATATC	2 cut(s)	300, 704
EcoT14I	CCWWGG	2 cut(s)	303, 607
EcoT22I	ATGCAT	1 cut(s)	749
EgeI	GGCGCC	1 cut(s)	20
EheI	GGCGCC	1 cut(s)	20
ErhI	CCWWGG	2 cut(s)	303, 607
FaqI	GGGAC	2 cut(s)	577, 1201
FauI	CCCGC	1 cut(s)	304
FauNDI	CATATG	1 cut(s)	743
Fnu4HI	GCNGC	7 cut(s)	66, 151, 309, 423, 498, 795, 983
FokI	GGATG	3 cut(s)	774, 822, 1074
Fsp4HI	GCNGC	7 cut(s)	66, 151, 309, 423, 498, 795, 983
FspBI	CTAG	2 cut(s)	824, 860
GlaI	GCGC	5 cut(s)	20, 112, 135, 972, 1324
GluI	GCNGC	7 cut(s)	66, 151, 309, 423, 498, 795, 983
GsaI	CCCAGC	1 cut(s)	99
HaeII	RGCGCY	3 cut(s)	22, 114, 974
HaeIII	GGCC	7 cut(s)	43, 153, 374, 486, 602, 735, 1287
HapII	CCGG	3 cut(s)	40, 168, 561
HgaI	GACGC	3 cut(s)	439, 504, 630
HhaI	GCGC	5 cut(s)	21, 113, 136, 973, 1325
Hin1I	GRCGYC	1 cut(s)	19
Hin6I	GCGC	5 cut(s)	19, 111, 134, 971, 1323
HinP1I	GCGC	5 cut(s)	19, 111, 134, 971, 1323
HincII	GTYRAC	1 cut(s)	1087
HindII	GTYRAC	1 cut(s)	1087
HindIII	AAGCTT	1 cut(s)	1068
HinfI	GANTC	4 cut(s)	189, 268, 688, 956
HpaII	CCGG	3 cut(s)	40, 168, 561
HphI	GGTGA	4 cut(s)	223, 418, 427, 439
Hpy166II	GTNNAC	5 cut(s)	550, 582, 730, 1087, 1127
Hpy188I	TCNGA	5 cut(s)	543, 961, 1175, 1200, 1294
Hpy188III	TCNNGA	2 cut(s)	79, 772
Hpy8I	GTNNAC	5 cut(s)	550, 582, 730, 1087, 1127
Hpy99I	CGWCG	3 cut(s)	80, 520, 646
HpyAV	CCTTC	3 cut(s)	79, 592, 613
HpyCH4III	ACNGT	3 cut(s)	345, 448, 1192
HpyCH4V	TGCA	9 cut(s)	199, 385, 442, 716, 747, 794, 982, 1008, 1049
HpyF10VI	GCNNNNNNNGC	9 cut(s)	49, 142, 164, 419, 439, 979, 1055, 1076, 1256
HpyF3I	CTNAG	3 cut(s)	261, 540, 920
Hsp92I	GRCGYC	1 cut(s)	19
HspAI	GCGC	5 cut(s)	19, 111, 134, 971, 1323
KasI	GGCGCC	1 cut(s)	18
KpnI	GGTACC	1 cut(s)	1118
KroI	GCCGGC	1 cut(s)	39
KroNI	GCCGGC	1 cut(s)	41
Kzo9I	GATC	4 cut(s)	213, 417, 525, 1170
LmnI	GCTCC	4 cut(s)	164, 494, 827, 1055
Lsp1109I	GCAGC	2 cut(s)	806, 994
MaeI	CTAG	2 cut(s)	824, 860
MaeIII	GTNAC	3 cut(s)	23, 427, 1097
MalI	GATC	4 cut(s)	215, 419, 527, 1172
MbiI	CCGCTC	1 cut(s)	497
MboI	GATC	4 cut(s)	213, 417, 525, 1170
MboII	GAAGA	3 cut(s)	26, 1187, 1274
MfeI	CAATTG	1 cut(s)	1050
MlsI	TGGCCA	1 cut(s)	374
MluCI	AATT	3 cut(s)	82, 1050, 1142
MluI	ACGCGT	1 cut(s)	513
MluNI	TGGCCA	1 cut(s)	374
Mly113I	GGCGCC	1 cut(s)	19
MnlI	CCTC	8 cut(s)	65, 71, 227, 801, 911, 923, 1240, 1277
Mox20I	TGGCCA	1 cut(s)	374
Mph1103I	ATGCAT	1 cut(s)	749
MroNI	GCCGGC	1 cut(s)	39
MroXI	GAANNNNTTC	1 cut(s)	602
MscI	TGGCCA	1 cut(s)	374
MseI	TTAA	2 cut(s)	627, 1339
MslI	CAYNNNNRTG	2 cut(s)	329, 746
Msp20I	TGGCCA	1 cut(s)	374
MspA1I	CMGCKG	2 cut(s)	175, 456
MspI	CCGG	3 cut(s)	40, 168, 561
MspR9I	CCNGG	3 cut(s)	45, 488, 562
MunI	CAATTG	1 cut(s)	1050
Mva1269I	GAATGC	3 cut(s)	718, 796, 1182
MvaI	CCWGG	2 cut(s)	45, 488
MvnI	CGCG	2 cut(s)	422, 515
MwoI	GCNNNNNNNGC	9 cut(s)	49, 142, 164, 419, 439, 979, 1055, 1076, 1256
NaeI	GCCGGC	1 cut(s)	41
NarI	GGCGCC	1 cut(s)	19
NciI	CCSGG	1 cut(s)	562
NcoI	CCATGG	1 cut(s)	607
NdeI	CATATG	1 cut(s)	743
NdeII	GATC	4 cut(s)	213, 417, 525, 1170
NgoMIV	GCCGGC	1 cut(s)	39
NlaIV	GGNNCC	4 cut(s)	20, 166, 485, 1116
NmeAIII	GCCGAG	1 cut(s)	99
NmuCI	GTSAC	2 cut(s)	23, 427
NsiI	ATGCAT	1 cut(s)	749
NspI	RCATGY	2 cut(s)	184, 199
PagI	TCATGA	1 cut(s)	771
PceI	AGGCCT	1 cut(s)	602
PciI	ACATGT	1 cut(s)	180
PcsI	WCGNNNNNNNCGW	1 cut(s)	228
PctI	GAATGC	3 cut(s)	718, 796, 1182
PdiI	GCCGGC	1 cut(s)	41
PdmI	GAANNNNTTC	1 cut(s)	602
PfeI	GAWTC	4 cut(s)	189, 268, 688, 956
Pfl23II	CGTACG	1 cut(s)	351
PfoI	TCCNGGA	1 cut(s)	560
PkrI	GCNGC	7 cut(s)	67, 152, 310, 424, 499, 796, 984
PluTI	GGCGCC	1 cut(s)	22
PscI	ACATGT	1 cut(s)	180
PshAI	GACNNNNGTC	1 cut(s)	1205
PsiI	TTATAA	1 cut(s)	1227
Psp6I	CCWGG	2 cut(s)	43, 486
PspFI	CCCAGC	1 cut(s)	95
PspGI	CCWGG	2 cut(s)	43, 486
PspLI	CGTACG	1 cut(s)	351
PspN4I	GGNNCC	4 cut(s)	20, 166, 485, 1116
PspPI	GGNCC	1 cut(s)	484
PstI	CTGCAG	1 cut(s)	387
PstNI	CAGNNNCTG	1 cut(s)	271
PvuII	CAGCTG	2 cut(s)	175, 456
RsaI	GTAC	8 cut(s)	9, 251, 275, 353, 551, 1035, 1116, 1139
RsaNI	GTAC	8 cut(s)	8, 250, 274, 352, 550, 1034, 1115, 1138
RseI	CAYNNNNRTG	2 cut(s)	329, 746
SaqAI	TTAA	2 cut(s)	627, 1339
SatI	GCNGC	7 cut(s)	66, 151, 309, 423, 498, 795, 983
Sau3AI	GATC	4 cut(s)	213, 417, 525, 1170
Sau96I	GGNCC	1 cut(s)	484
ScaI	AGTACT	1 cut(s)	9
ScrFI	CCNGG	3 cut(s)	45, 488, 562
SfcI	CTRYAG	2 cut(s)	383, 1254
SfoI	GGCGCC	1 cut(s)	20
SmiMI	CAYNNNNRTG	2 cut(s)	329, 746
SmlI	CTYRAG	1 cut(s)	28
SmoI	CTYRAG	1 cut(s)	28
SpeI	ACTAGT	1 cut(s)	859
Sse9I	AATT	3 cut(s)	82, 1050, 1142
SseBI	AGGCCT	1 cut(s)	602
SspDI	GGCGCC	1 cut(s)	18
SspMI	CTAG	2 cut(s)	824, 860
StuI	AGGCCT	1 cut(s)	602
StyD4I	CCNGG	3 cut(s)	43, 486, 560
StyI	CCWWGG	2 cut(s)	303, 607
TaaI	ACNGT	3 cut(s)	345, 448, 1192
TaqI	TCGA	3 cut(s)	57, 78, 815
TaqII	GACCGA	1 cut(s)	76
TasI	AATT	3 cut(s)	82, 1050, 1142
TatI	WGTACW	4 cut(s)	7, 249, 549, 1033
TauI	GCSGC	5 cut(s)	68, 153, 311, 425, 500
TfiI	GAWTC	4 cut(s)	189, 268, 688, 956
Tru1I	TTAA	2 cut(s)	627, 1339
Tru9I	TTAA	2 cut(s)	627, 1339
TseFI	GTSAC	2 cut(s)	23, 427
TseI	GCWGC	2 cut(s)	794, 982
Tsp45I	GTSAC	2 cut(s)	23, 427
TspDTI	ATGAA	4 cut(s)	764, 803, 834, 877
TspGWI	ACGGA	4 cut(s)	64, 291, 357, 1325
XapI	RAATTY	2 cut(s)	82, 1142
XceI	RCATGY	2 cut(s)	184, 199
XmnI	GAANNNNTTC	1 cut(s)	602
XspI	CTAG	2 cut(s)	824, 860
ZrmI	AGTACT	1 cut(s)	9
Zsp2I	ATGCAT	1 cut(s)	749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.