Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0003189

Physical Location & Seq

Genomic Coordinates Forward (+)

60032399 .. 60038459

Gene Structure 6061 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG340800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCGGACAATAGGCAGCCACTTCTGTCCTCGAGAGACGAGGCGGTGCCACCTCCTCAACATCAGGTGCATGACCACCTAGAGTCCCTCCCACCCGCAAACCCTTCTTTCATTTCTAGCAGCACCTTCAATCCCGACTCCGATGACATCCCTCCCATCAATGGCGTCCGCGACTTCTTCCGAGAGTTCAAGCGGGAATCCAAGAAGCTCTGGTTTCTTGCCGGCCCCGCCATCTTCACTTCCCTATGCCAGTACTCTCTCGGCGCCGTCACCCAAATCTTCGCCGGGCACGTCGGCACTCTAGACCTGGCCGCCGTCTCCATCGAAAACTCCGTCATCGCCGGATTCTCCTTCGGCGTTTTGCTTGGAATGGGGAGTGCGCTCGAGACGCTATGCGGGCAAGCGTTCGGGGCCGGACAGTTGGACATGTTAGGAATCTACATGCAGCGTTCGTGGGTGATCCTCAACATAACCGCCGTAGCGTTGTGCTTTCTCTACATATTTGCTCAGCAGATTCTGTACGGAATAGGGCAGACGGCGGAGATATCAAAGGCGGCGGGGGTGTTCGCTCTCTATATGATTCCACAGCTGTTCGCGTACGCGTTTAACTTTCCGATAACCAAGTTTCTGCAGTCGCAGAGCAAGATCATGGTGATGGCGGTGATCGCGGCGGTGGTGCTGGTCATACACACAGTGTTCAGCTGGCTGCTGATGTTGAAGCTCGGGTGGGGGCTGGTTGGCGCGGCGGTGGTGCTCAACGTGTCGTGGTGGCTCGTAGTGCTGTCGCAGCTGGGTTATATTATGGCCGGAACTTGTGGTCGGGCGTGGACGGGCTTCTCTTGGAAGGCCTTCCATAATCTTTGGGAGTTTGTTAAGTTGTCTCTTGCTTCAGCAGTCATGCTCTGTTTGGAAGTGTGGTATTTTATGGCCTTGATTCTCTTTGCTGGGTACCTACCCAATGCAGAAGTTTCTGTGGATGGCCTATCCATATGCATGAACATCTTGGGATGGACAGTCATGGTGTCTCTAGGCATGAATGCAGCAATAAGTGTAAGAGTGTCGAATGAACTAGGAGGAGGACACCCAAGAACAGCAAAGTTCTCACTAGTAGTGGCTGTGATATCATCCTTTTTCGTCGGTGTTCTCATTTCCGTCATCCTCATCATCTTCAGAAACCAATATCCCGCCTTGTTTTCAAGCGATTCGGAAGTGCAGGCTCTCGTGAAGCAGCTTACGCCTTTGCTGGCAACCTGCATTGTCATCAACAACATTCAGCCTGTATTATCTGGTGTTGCAATTGGAGCAGGATGGCAAGCTGTTGTGGCCTATGTGAACATAGCATGTTACTATGTAGTTGGGGTACCTTTGGGTTTACTCTTTGGGTACTACTTTGACTGGGGTGTTGAGGGTATCTGGAGTGGAATGCTGATAGGGACATGCATCCAAACTATTGTCCTTTTCATCATGATTTATAGGACCAACTGGAGCAAAGAGGTAAAGGGATCGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0015238 GO:0015893 GO:0016020 GO:0016049 GO:0021700 GO:0022622 GO:0022857 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0040007 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0060560 GO:0071695 GO:0080147 GO:0090558 GO:0090627 GO:0098588 GO:0098805 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

503

Amino Acids

54.88

Weight (kDa)

6.38

Isoelectric Point (pI)

33.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	76 - 236	9.9e-35	MatE
MatE	PF01554	297 - 458	1.1e-33	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003189)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26590 AT3G26590 AT5G38030
fragaria_vesca	FvH4_4g25500 FvH4_4g25500 FvH4_4g25510
malus_domestica	MD13G1102100.v1.1 MD16G1102700.v1.1
prunus_persica	Prupe.1G243700_v2.0.a1
pyrus_communis	pycom13g08920 pycom13g08930 pycom16g08710 pycom16g08730
rosa_chinensis	RchiOBHm_Chr4g0432851 RchiOBHm_Chr4g0432861
rosa_laevigata	RLG00000006804 RLG00000006805 RLG00000030674
rosa_multiflora	Rmu_co8449711.1_g000001 Rmu_sc0005234.1_g000013
rosa_roxburghii	Rroxscaffold_5G00374290 Rroxscaffold_5G00374300
rosa_rugosa	Rorug04G0263200 Rorug04G0263300 Rorug04G0263400 Rorug04G0263500 Rorug04G0263600
rosa_samantha	Rh4AG317500 Rh4AG317700 Rh4BG325800 Rh4CG340800 Rh4CG340900 Rh4CG341000 Rh4DG320900 Rh4DG321000
rosa_wichuraiana	Rw4G027610 Rw4G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1259
Acc65I	GGTACC	2 cut(s)	948, 1360
AccB1I	GGYRCC	4 cut(s)	46, 263, 948, 1360
AccII	CGCG	5 cut(s)	171, 596, 602, 668, 743
AclWI	GGATC	2 cut(s)	454, 1510
AcoI	YGGCCR	2 cut(s)	309, 804
AcuI	CTGAAG	2 cut(s)	873, 1153
AcyI	GRCGYC	2 cut(s)	165, 264
AdeI	CACNNNGTG	1 cut(s)	694
AfaI	GTAC	6 cut(s)	254, 521, 599, 950, 1362, 1385
AfiI	CCNNNNNNNGG	1 cut(s)	161
AflIII	ACRYGT	3 cut(s)	426, 600, 759
AgsI	TTSAA	4 cut(s)	130, 190, 718, 1197
AhlI	ACTAGT	1 cut(s)	1105
AjiI	CACGTC	1 cut(s)	292
AjnI	CCWGG	1 cut(s)	306
AluBI	AGCT	7 cut(s)	208, 589, 702, 721, 790, 1231, 1316
AluI	AGCT	7 cut(s)	208, 589, 702, 721, 790, 1231, 1316
Alw21I	GWGCWC	1 cut(s)	756
Alw26I	GTCTC	5 cut(s)	30, 322, 380, 885, 1029
AlwI	GGATC	2 cut(s)	454, 1510
AlwNI	CAGNNNCTG	1 cut(s)	517
Ama87I	CYCGRG	3 cut(s)	31, 383, 722
AoxI	GGCC	8 cut(s)	223, 309, 411, 804, 846, 927, 979, 1323
ApeKI	GCWGC	7 cut(s)	16, 120, 445, 706, 787, 1040, 1228
ArsI	GACNNNNNNTTYG	2 cut(s)	318, 350
Asp700I	GAANNNNTTC	1 cut(s)	848
Asp718I	GGTACC	2 cut(s)	948, 1360
AspLEI	GCGC	3 cut(s)	266, 382, 743
AspS9I	GGNCC	3 cut(s)	224, 411, 1476
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	4 cut(s)	262, 469, 664, 673
AvaI	CYCGRG	3 cut(s)	31, 383, 722
AvaII	GGWCC	1 cut(s)	1476
BaeGI	GKGCMC	1 cut(s)	291
BanI	GGYRCC	4 cut(s)	46, 263, 948, 1360
BauI	CACGAG	1 cut(s)	1220
Bbv12I	GWGCWC	1 cut(s)	756
BbvI	GCAGC	7 cut(s)	28, 132, 457, 693, 799, 1052, 1240
BccI	CCATC	7 cut(s)	164, 239, 329, 649, 971, 1002, 1302
BceAI	ACGGC	4 cut(s)	251, 299, 461, 552
BciT130I	CCWGG	1 cut(s)	308
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	5 cut(s)	30, 322, 380, 885, 1029
BcuI	ACTAGT	1 cut(s)	1105
BfaI	CTAG	6 cut(s)	80, 117, 302, 1028, 1070, 1106
BfmI	CTRYAG	1 cut(s)	629
BfoI	RGCGCY	1 cut(s)	267
BfuAI	ACCTGC	1 cut(s)	1259
BlpI	GCTNAGC	1 cut(s)	507
BmcAI	AGTACT	1 cut(s)	254
Bme1390I	CCNGG	2 cut(s)	286, 308
Bme18I	GGWCC	1 cut(s)	1476
BmeT110I	CYCGRG	3 cut(s)	31, 383, 722
BmgBI	CACGTC	1 cut(s)	292
BmgT120I	GGNCC	3 cut(s)	224, 411, 1476
BmiI	GGNNCC	6 cut(s)	48, 226, 265, 412, 950, 1362
BmrFI	CCNGG	2 cut(s)	286, 308
BmrI	ACTGGG	1 cut(s)	1405
BmsI	GCATC	1 cut(s)	1449
BmuI	ACTGGG	1 cut(s)	1405
BpmI	CTGGAG	2 cut(s)	1435, 1504
Bpu1102I	GCTNAGC	1 cut(s)	507
BpuMI	CCSGG	1 cut(s)	286
Bsa29I	ATCGAT	1 cut(s)	1505
BsaHI	GRCGYC	2 cut(s)	165, 264
Bsc4I	CCNNNNNNNGG	1 cut(s)	161
Bse118I	RCCGGY	1 cut(s)	221
Bse1I	ACTGG	3 cut(s)	250, 1400, 1487
BseBI	CCWGG	1 cut(s)	308
BseCI	ATCGAT	1 cut(s)	1505
BseGI	GGATG	7 cut(s)	147, 982, 1013, 1124, 1155, 1313, 1440
BseLI	CCNNNNNNNGG	1 cut(s)	161
BseMII	CTCAG	1 cut(s)	521
BseNI	ACTGG	3 cut(s)	250, 1400, 1487
BseRI	GAGGAG	2 cut(s)	45, 1089
BseSI	GKGCMC	1 cut(s)	291
BseXI	GCAGC	7 cut(s)	28, 132, 457, 693, 799, 1052, 1240
BseYI	CCCAGC	2 cut(s)	790, 944
BsgI	GTGCAG	1 cut(s)	1232
Bsh1236I	CGCG	5 cut(s)	171, 596, 602, 668, 743
BshFI	GGCC	8 cut(s)	225, 311, 413, 806, 848, 929, 981, 1325
BshNI	GGYRCC	4 cut(s)	46, 263, 948, 1360
BshVI	ATCGAT	1 cut(s)	1505
BsiHKAI	GWGCWC	1 cut(s)	756
BsiHKCI	CYCGRG	3 cut(s)	31, 383, 722
BsiSI	CCGG	5 cut(s)	222, 285, 342, 414, 807
BsiWI	CGTACG	1 cut(s)	597
BslFI	GGGAC	2 cut(s)	70, 1447
BslI	CCNNNNNNNGG	1 cut(s)	161
BsmAI	GTCTC	5 cut(s)	30, 322, 380, 885, 1029
BsmBI	CGTCTC	3 cut(s)	30, 322, 380
BsmFI	GGGAC	2 cut(s)	70, 1447
BsmI	GAATGC	2 cut(s)	1042, 1428
BsnI	GGCC	8 cut(s)	225, 311, 413, 806, 848, 929, 981, 1325
BsoBI	CYCGRG	3 cut(s)	31, 383, 722
Bsp1286I	GDGCHC	2 cut(s)	291, 756
Bsp143I	GATC	4 cut(s)	459, 645, 663, 1502
Bsp1720I	GCTNAGC	1 cut(s)	507
BspANI	GGCC	8 cut(s)	225, 311, 413, 806, 848, 929, 981, 1325
BspCNI	CTCAG	1 cut(s)	520
BspDI	ATCGAT	1 cut(s)	1505
BspFNI	CGCG	5 cut(s)	171, 596, 602, 668, 743
BspHI	TCATGA	1 cut(s)	1464
BspLI	GGNNCC	6 cut(s)	48, 226, 265, 412, 950, 1362
BspMAI	CTGCAG	1 cut(s)	633
BspMI	ACCTGC	1 cut(s)	1259
BspPI	GGATC	2 cut(s)	454, 1510
BspT107I	GGYRCC	4 cut(s)	46, 263, 948, 1360
BsrFI	RCCGGY	1 cut(s)	221
BsrI	ACTGG	3 cut(s)	250, 1400, 1487
BssAI	RCCGGY	1 cut(s)	221
BssMI	GATC	4 cut(s)	459, 645, 663, 1502
BssNI	GRCGYC	2 cut(s)	165, 264
BssSI	CACGAG	1 cut(s)	1220
Bst2BI	CACGAG	1 cut(s)	1220
Bst2UI	CCWGG	1 cut(s)	308
Bst4CI	ACNGT	3 cut(s)	420, 694, 1015
BstACI	GRCGYC	2 cut(s)	165, 264
BstC8I	GCNNGC	7 cut(s)	223, 398, 402, 704, 1215, 1245, 1314
BstDEI	CTNAG	1 cut(s)	507
BstF5I	GGATG	7 cut(s)	147, 982, 1013, 1124, 1155, 1313, 1440
BstFNI	CGCG	5 cut(s)	171, 596, 602, 668, 743
BstH2I	RGCGCY	1 cut(s)	267
BstHHI	GCGC	3 cut(s)	266, 382, 743
BstKTI	GATC	4 cut(s)	462, 648, 666, 1505
BstMAI	GTCTC	5 cut(s)	30, 322, 380, 885, 1029
BstMBI	GATC	4 cut(s)	459, 645, 663, 1502
BstNI	CCWGG	1 cut(s)	308
BstNSI	RCATGY	4 cut(s)	430, 445, 1344, 1440
BstSCI	CCNGG	2 cut(s)	284, 306
BstSFI	CTRYAG	1 cut(s)	629
BstSLI	GKGCMC	1 cut(s)	291
BstUI	CGCG	5 cut(s)	171, 596, 602, 668, 743
BstV1I	GCAGC	7 cut(s)	28, 132, 457, 693, 799, 1052, 1240
Bsu15I	ATCGAT	1 cut(s)	1505
BsuRI	GGCC	8 cut(s)	225, 311, 413, 806, 848, 929, 981, 1325
BsuTUI	ATCGAT	1 cut(s)	1505
BtgZI	GCGATG	1 cut(s)	322
BtrI	CACGTC	1 cut(s)	292
BtsCI	GGATG	7 cut(s)	147, 982, 1013, 1124, 1155, 1313, 1440
BtsIMutI	CAGTG	1 cut(s)	699
BveI	ACCTGC	1 cut(s)	1259
Cac8I	GCNNGC	7 cut(s)	223, 398, 402, 704, 1215, 1245, 1314
CaiI	CAGNNNCTG	1 cut(s)	517
CciI	TCATGA	1 cut(s)	1464
CfoI	GCGC	3 cut(s)	266, 382, 743
Cfr10I	RCCGGY	1 cut(s)	221
Cfr13I	GGNCC	3 cut(s)	224, 411, 1476
ClaI	ATCGAT	1 cut(s)	1505
CseI	GACGC	2 cut(s)	154, 397
Csp6I	GTAC	6 cut(s)	253, 520, 598, 949, 1361, 1384
CviQI	GTAC	6 cut(s)	253, 520, 598, 949, 1361, 1384
DdeI	CTNAG	1 cut(s)	507
DinI	GGCGCC	1 cut(s)	265
DpnI	GATC	4 cut(s)	461, 647, 665, 1504
DpnII	GATC	4 cut(s)	459, 645, 663, 1502
DraIII	CACNNNGTG	1 cut(s)	694
EaeI	YGGCCR	2 cut(s)	309, 804
EciI	GGCGGA	2 cut(s)	20, 554
Eco147I	AGGCCT	1 cut(s)	848
Eco32I	GATATC	2 cut(s)	546, 1122
Eco47I	GGWCC	1 cut(s)	1476
Eco57I	CTGAAG	2 cut(s)	873, 1153
Eco88I	CYCGRG	3 cut(s)	31, 383, 722
EcoRII	CCWGG	1 cut(s)	306
EcoRV	GATATC	2 cut(s)	546, 1122
EcoT22I	ATGCAT	2 cut(s)	995, 1442
EgeI	GGCGCC	1 cut(s)	265
EheI	GGCGCC	1 cut(s)	265
Esp3I	CGTCTC	3 cut(s)	30, 322, 380
FaqI	GGGAC	2 cut(s)	70, 1447
FauI	CCCGC	6 cut(s)	103, 186, 235, 389, 550, 1192
FauNDI	CATATG	1 cut(s)	989
FokI	GGATG	7 cut(s)	134, 989, 1020, 1111, 1142, 1320, 1427
FspBI	CTAG	6 cut(s)	80, 117, 302, 1028, 1070, 1106
GlaI	GCGC	3 cut(s)	265, 381, 742
GsaI	CCCAGC	2 cut(s)	794, 948
GsuI	CTGGAG	2 cut(s)	1435, 1504
HaeII	RGCGCY	1 cut(s)	267
HaeIII	GGCC	8 cut(s)	225, 311, 413, 806, 848, 929, 981, 1325
HapII	CCGG	5 cut(s)	222, 285, 342, 414, 807
HgaI	GACGC	2 cut(s)	154, 397
HhaI	GCGC	3 cut(s)	266, 382, 743
Hin1I	GRCGYC	2 cut(s)	165, 264
Hin6I	GCGC	3 cut(s)	264, 380, 741
HinP1I	GCGC	3 cut(s)	264, 380, 741
HinfI	GANTC	9 cut(s)	83, 137, 197, 345, 435, 514, 580, 934, 1202
HpaII	CCGG	5 cut(s)	222, 285, 342, 414, 807
HphI	GGTGA	4 cut(s)	262, 469, 664, 673
Hpy166II	GTNNAC	3 cut(s)	828, 1333, 1373
Hpy188I	TCNGA	5 cut(s)	142, 182, 615, 1172, 1207
Hpy188III	TCNNGA	7 cut(s)	33, 134, 302, 385, 1222, 1414, 1465
Hpy8I	GTNNAC	3 cut(s)	828, 1333, 1373
Hpy99I	CGWCG	2 cut(s)	296, 1139
HpyAV	CCTTC	5 cut(s)	114, 136, 361, 838, 859
HpyCH4III	ACNGT	3 cut(s)	420, 694, 1015
HpyCH4IV	ACGT	2 cut(s)	291, 759
HpyF3I	CTNAG	1 cut(s)	507
HpySE526I	ACGT	2 cut(s)	291, 759
Hsp92I	GRCGYC	2 cut(s)	165, 264
HspAI	GCGC	3 cut(s)	264, 380, 741
KasI	GGCGCC	1 cut(s)	263
KpnI	GGTACC	2 cut(s)	952, 1364
KroI	GCCGGC	1 cut(s)	221
KroNI	GCCGGC	1 cut(s)	223
Kzo9I	GATC	4 cut(s)	459, 645, 663, 1502
LmnI	GCTCC	2 cut(s)	1301, 1485
Lsp1109I	GCAGC	7 cut(s)	28, 132, 457, 693, 799, 1052, 1240
LweI	GCATC	1 cut(s)	1449
MaeI	CTAG	6 cut(s)	80, 117, 302, 1028, 1070, 1106
MaeII	ACGT	2 cut(s)	291, 759
MaeIII	GTNAC	2 cut(s)	268, 1343
MalI	GATC	4 cut(s)	461, 647, 665, 1504
MboI	GATC	4 cut(s)	459, 645, 663, 1502
MboII	GAAGA	4 cut(s)	169, 226, 271, 1159
MfeI	CAATTG	1 cut(s)	1296
MhlI	GDGCHC	2 cut(s)	291, 756
MluCI	AATT	1 cut(s)	1296
MluI	ACGCGT	1 cut(s)	600
Mly113I	GGCGCC	1 cut(s)	264
MlyI	GAGTC	2 cut(s)	92, 131
MmeI	TCCRAC	1 cut(s)	402
Mph1103I	ATGCAT	2 cut(s)	995, 1442
MroNI	GCCGGC	1 cut(s)	221
MroXI	GAANNNNTTC	1 cut(s)	848
MseI	TTAA	2 cut(s)	606, 873
MslI	CAYNNNNRTG	2 cut(s)	653, 992
MspA1I	CMGCKG	3 cut(s)	589, 702, 790
MspI	CCGG	5 cut(s)	222, 285, 342, 414, 807
MspR9I	CCNGG	2 cut(s)	286, 308
MunI	CAATTG	1 cut(s)	1296
Mva1269I	GAATGC	2 cut(s)	1042, 1428
MvaI	CCWGG	1 cut(s)	308
MvnI	CGCG	5 cut(s)	171, 596, 602, 668, 743
NaeI	GCCGGC	1 cut(s)	223
NarI	GGCGCC	1 cut(s)	264
NciI	CCSGG	1 cut(s)	286
NdeI	CATATG	1 cut(s)	989
NdeII	GATC	4 cut(s)	459, 645, 663, 1502
NgoMIV	GCCGGC	1 cut(s)	221
NlaIV	GGNNCC	6 cut(s)	48, 226, 265, 412, 950, 1362
NmeAIII	GCCGAG	1 cut(s)	240
NmuCI	GTSAC	1 cut(s)	268
NsiI	ATGCAT	2 cut(s)	995, 1442
NspI	RCATGY	4 cut(s)	430, 445, 1344, 1440
PaeR7I	CTCGAG	2 cut(s)	31, 383
PagI	TCATGA	1 cut(s)	1464
PceI	AGGCCT	1 cut(s)	848
PciI	ACATGT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	2 cut(s)	288, 330
PctI	GAATGC	2 cut(s)	1042, 1428
PdiI	GCCGGC	1 cut(s)	223
PdmI	GAANNNNTTC	1 cut(s)	848
PfeI	GAWTC	7 cut(s)	197, 345, 435, 514, 580, 934, 1202
Pfl23II	CGTACG	1 cut(s)	597
PleI	GAGTC	2 cut(s)	91, 131
PluTI	GGCGCC	1 cut(s)	267
PpsI	GAGTC	2 cut(s)	91, 131
PscI	ACATGT	1 cut(s)	426
Psp6I	CCWGG	1 cut(s)	306
PspFI	CCCAGC	2 cut(s)	790, 944
PspGI	CCWGG	1 cut(s)	306
PspLI	CGTACG	1 cut(s)	597
PspN4I	GGNNCC	6 cut(s)	48, 226, 265, 412, 950, 1362
PspPI	GGNCC	3 cut(s)	224, 411, 1476
PstI	CTGCAG	1 cut(s)	633
PstNI	CAGNNNCTG	1 cut(s)	517
PvuII	CAGCTG	3 cut(s)	589, 702, 790
RsaI	GTAC	6 cut(s)	254, 521, 599, 950, 1362, 1385
RsaNI	GTAC	6 cut(s)	253, 520, 598, 949, 1361, 1384
RseI	CAYNNNNRTG	2 cut(s)	653, 992
SaqAI	TTAA	2 cut(s)	606, 873
Sau3AI	GATC	4 cut(s)	459, 645, 663, 1502
Sau96I	GGNCC	3 cut(s)	224, 411, 1476
ScaI	AGTACT	1 cut(s)	254
SchI	GAGTC	2 cut(s)	92, 131
ScrFI	CCNGG	2 cut(s)	286, 308
SduI	GDGCHC	2 cut(s)	291, 756
SfaNI	GCATC	1 cut(s)	1449
SfcI	CTRYAG	1 cut(s)	629
SfoI	GGCGCC	1 cut(s)	265
Sfr274I	CTCGAG	2 cut(s)	31, 383
SinI	GGWCC	1 cut(s)	1476
SlaI	CTCGAG	2 cut(s)	31, 383
SmiMI	CAYNNNNRTG	2 cut(s)	653, 992
SmlI	CTYRAG	2 cut(s)	31, 383
SmoI	CTYRAG	2 cut(s)	31, 383
SpeI	ACTAGT	1 cut(s)	1105
Sse9I	AATT	1 cut(s)	1296
SseBI	AGGCCT	1 cut(s)	848
SspDI	GGCGCC	1 cut(s)	263
SspMI	CTAG	6 cut(s)	80, 117, 302, 1028, 1070, 1106
StuI	AGGCCT	1 cut(s)	848
StyD4I	CCNGG	2 cut(s)	284, 306
TaaI	ACNGT	3 cut(s)	420, 694, 1015
TaiI	ACGT	2 cut(s)	294, 762
TaqI	TCGA	5 cut(s)	32, 324, 384, 1061, 1505
TasI	AATT	1 cut(s)	1296
TatI	WGTACW	1 cut(s)	252
TauI	GCSGC	4 cut(s)	314, 557, 671, 746
TfiI	GAWTC	7 cut(s)	197, 345, 435, 514, 580, 934, 1202
Tru1I	TTAA	2 cut(s)	606, 873
Tru9I	TTAA	2 cut(s)	606, 873
TscAI	CASTG	1 cut(s)	699
TseFI	GTSAC	1 cut(s)	268
TseI	GCWGC	7 cut(s)	16, 120, 445, 706, 787, 1040, 1228
Tsp45I	GTSAC	1 cut(s)	268
TspDTI	ATGAA	5 cut(s)	100, 1010, 1049, 1080, 1450
TspGWI	ACGGA	3 cut(s)	322, 537, 1141
TspRI	CASTG	1 cut(s)	699
VpaK11BI	GGWCC	1 cut(s)	1476
XbaI	TCTAGA	1 cut(s)	301
XceI	RCATGY	4 cut(s)	430, 445, 1344, 1440
XhoI	CTCGAG	2 cut(s)	31, 383
XmnI	GAANNNNTTC	1 cut(s)	848
XspI	CTAG	6 cut(s)	80, 117, 302, 1028, 1070, 1106
ZrmI	AGTACT	1 cut(s)	254
Zsp2I	ATGCAT	2 cut(s)	995, 1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.