Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Forward (+)

11252807 .. 11257814

Gene Structure 5008 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G29320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

ATGGATACGATGCGAATCTCCGGTGTATCAACCGGAGCTGAGGTTTTAATACAATGCAATTCCTTATCAAGCCTCGTTTCTCGTCGTTGCGACGACGGAAAATGGCGAACGAGAATGTTTCCGGCGAGAAACAGAGACTTGCGTCCATCGCCGACGAGAAGATCCTTTTTGTCGGTGAAATCTATCTCTAGCGAACCGAAAGCCAAAGTAACCGACGCAGTTCTCGATTCCGAACAAGAAGTGTTTATTAGCTCGATGAATCCGTTTGCGCCAGATGCTGCTTCGGTAGCTTCGAGTATCAAGTACCACGCGGAGTTTACGCCATTGTTTTCACCGGAGAAGTTTGAGTTGCCAAAGGCGTTCTTTGCGACTGCGCAAAGTGTTAGAGATGCTTTGATCATGAATTGGAATGCAACTTATGAGTATTACAACAGAGTGAATGTGAAACAAGCGTATTATTTGTCAATGGAGTTTTTGCAGGGTAGAGCCTTATCGAATGCCGTGGGTAACCTTGGGCTTAATAGCGCTTATGGTGATGCTTTGAAGAGGCTTGGTTTTGATTTGGAAAGCGTGGCTAGTCAGGAGCCAGATCCTGCACTTGGGAATGGTGGACTCGGGAGACTTGCCTCGTGTTTTTTGGATTCCATGGCAACTTTGAATTATCCGGCTTGGGGTTATGGACTTAGATACAAGTATGGCTTGTTCAAACAGAGAATTACAAAAGATGGACAGGAGGAAGCTGCAGAAGATTGGCTTGAGCTAAGCAATCCTTGGGAAATAGTCAGAAATGATGTCTCATATCCTATTAAGTTCTATGGGAAAGTGGTTTTTGGATCAGATGGTAAGAAACGGTGGATTGGTGGAGAAGACATTGTTGCTGTTGCTTATGATGTTCCTATACCTGGTTATAAAACTAAGACAACTATCAATCTGCGGCTCTGGTCAACAAAAGCTCCTTCCGAAGATTTTGATTTATCTTCATATAACTCTGGGAAGCATACTGAGGCAGCAGAAGCTCTATTCAACGCTGAAAAGATTTGCTTCGTGCTTTACCCCGGAGATGAGTCAACTGAAGGAAAGGCTCTTCGTCTGAAGCAACAATACACTCTGTGCTCAGCCTCGCTACAAGATATCGTAGCACGTTTTGAGACAAGGTCTGGAGGAAACGTCAACTGGGAAGAATTTCCAGAGAAGGTTGCAGTGCAGATGAATGACACTCACCCTACCCTATGCATTCCTGAGCTAATGAGGATTCTAATGGATTTAAAAGGACTAAGCTGGGAAGACGCTTGGAAAATCACACAAAGGACTGTGGCATACACAAACCATACAGTCTTGCCTGAGGCACTGGAGAAGTGGAGTTTAGAACTCATGGAGAAATTGCTTCCTCGTCATGTGGAGATTATCGAAAAGATTGATGAGGAGCTAGTTCGCACAATTGTTTCAGAGTATGGCACCGCGGATCCTGACTTACTTGAAGAAAAACTGAAGGCAATGAGGATCTTGGAAAATGTCGAGTTGCCTTCTGCCTTTGCAGATGTGATCGTGAAGCCGGTGAACAAACCAGTTACTGCAAAAGATGCTCAAAATGGCGTGAAAACGGAACAAGAAGAGGAAAAAACTGCTGGAGAGGAAGAGGAAGACGAAGTTATCCCAGAACCAACAGTAGAACCCCCCAAGATGGTCCGTATGGCCAACCTTGCTGTTGTGGGTGGTCATGCTGTAAATGGCGTTGCAGAGATACACAGTGAAATAGTGAAGCAGGACGTGTTTAATGATTTCGTACAGTTGTGGCCAGAAAAATTTCAGAACAAAACAAATGGAGTAACACCAAGGCGATGGATTCGTTTTTGCAACCCATATTTAAGTGATATTATAACTAACTGGATAGGCACAGAAGACTGGGTCTTAAATACCGAAAAGGTTGCGGAACTAAGAAAGTTTGCAGATAATGAAGATCTCCAATCTGAGTGGAGGGCAGCAAAGAAGAAGAACAAGTTGAAGGTTGTATCACTTATCAAGGAAAGAACTGGATATACTGTCAGCCCCGATGCAATGTTCGACATTCAGATCAAGCGTATACATGAGTACAAGCGACAACTGCTAAATATCTTGGGAATTGTTTACCGCTACAAAAAGATGAAGGAAATGAGTGCTAGTGAGAGAGAGAAAGCATTTGTTCCAAGAGTTTGCATATTTGGGGGAAAAGCATTTGCCACATATGTGCAAGCTAAGAGAATTGTTAAATTTATCACAGATGTTGCGTCTACAATTAACCATGATCCAGAAATAGGTGACCTCCTTAAGGTTATCTTTGTTCCTGATTACAATGTCAGTGTTGCTGAATTGCTCATTCCAGCAAGTGAGCTTTCTCAGCACATCAGTACTGCTGGGATGGAAGCTAGTGGGACAAGCAACATGAAATTTTCGATGAACGGTTGCGTTTTGATTGGAACCTTGGATGGGGCGAATGTCGAGATTAGAGAAGAAGTTGGAGAAGAAAATTTCTTCCTCTTTGGTGCCAAAGCTGATCAGATTGTGAACCTCAGGAAGGAGAGAGCAGAGGGAAAGTTTGTTCCCGATCCTACTTTTGAAGAAGTCAAGAAGTTCGTTGGAAGCGGCGTCTTTGGCTCAAATAGCTATGATGAACTAATCGGCTCTTTGGAAGGAAACGAAGGCTTTGGACGAGCGGATTACTTCCTAGTTGGCAAAGACTTTCCTAGTTACATCGAATGCCAAGAAAAAGTCGACGAGGCATACCGAGACCAGAAAAGATGGACGAGAATGTCAATAATGAACACAGCAGGTTCATTCAAGTTTAGCAGTGACCGGACGATCCACGAATACGCCAAAGACATATGGAATATTAAGCAAGTGGAACTTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009414 GO:0009415 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009987 GO:0010035 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

962

Amino Acids

108.58

Weight (kDa)

5.36

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	181 - 504	2.8e-128	Carbohydrate phosphorylase
Phosphorylase	PF00343	557 - 956	4.1e-166	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	909, 1877
AasI	GACNNNNNNGTC	1 cut(s)	2785
Acc16I	TGCGCA	1 cut(s)	375
Acc36I	ACCTGC	1 cut(s)	2795
AccB1I	GGYRCC	2 cut(s)	1454, 2519
AccBSI	CCGCTC	1 cut(s)	2690
AccI	GTMKAC	3 cut(s)	2080, 2267, 2748
AccII	CGCG	2 cut(s)	311, 1460
AciI	CCGC	8 cut(s)	311, 934, 1458, 1460, 1928, 2128, 2619, 2690
AclWI	GGATC	9 cut(s)	156, 584, 841, 1457, 1470, 1508, 2276, 2576, 2830
AcoI	YGGCCR	2 cut(s)	1692, 1793
AcsI	RAATTY	5 cut(s)	1181, 1802, 2246, 2423, 2503
AcuI	CTGAAG	3 cut(s)	1092, 1112, 1508
AcyI	GRCGYC	1 cut(s)	2622
AdeI	CACNNNGTG	1 cut(s)	1110
AfaI	GTAC	4 cut(s)	305, 1785, 2090, 2386
AfeI	AGCGCT	1 cut(s)	526
AfiI	CCNNNNNNNGG	8 cut(s)	599, 671, 902, 1681, 2291, 2305, 2463, 2551
AflII	CTTAAG	1 cut(s)	2303
AflIII	ACRYGT	1 cut(s)	1767
AgsI	TTSAA	8 cut(s)	544, 658, 706, 1024, 1478, 2002, 2594, 2815
AjiI	CACGTC	1 cut(s)	1768
AjnI	CCWGG	1 cut(s)	901
AleI	CACNNNNGTG	1 cut(s)	2222
AloI	GAACNNNNNNTCC	2 cut(s)	2559, 2591
Alw21I	GWGCWC	1 cut(s)	1115
Alw26I	GTCTC	5 cut(s)	129, 613, 799, 1142, 2757
AlwI	GGATC	9 cut(s)	156, 584, 841, 1457, 1470, 1508, 2276, 2576, 2830
AlwNI	CAGNNNCTG	3 cut(s)	278, 593, 1571
Ama87I	CYCGRG	1 cut(s)	614
Aor51HI	AGCGCT	1 cut(s)	526
AoxI	GGCC	2 cut(s)	1692, 1793
ApeKI	GCWGC	4 cut(s)	278, 740, 1007, 1979
ApoI	RAATTY	5 cut(s)	1181, 1802, 2246, 2423, 2503
Asp700I	GAANNNNTTC	2 cut(s)	1182, 1803
AspLEI	GCGC	3 cut(s)	271, 376, 527
AspS9I	GGNCC	1 cut(s)	1684
AsuC2I	CCSGG	1 cut(s)	1056
AsuHPI	GGTGA	6 cut(s)	187, 324, 545, 1211, 1567, 2306
AvaI	CYCGRG	1 cut(s)	614
AvaII	GGWCC	1 cut(s)	1684
AxyI	CCTNAGG	2 cut(s)	1341, 2546
BalI	TGGCCA	2 cut(s)	1694, 1795
BamHI	GGATCC	1 cut(s)	1462
BanI	GGYRCC	2 cut(s)	1454, 2519
BarI	GAAGNNNNNNTAC	2 cut(s)	1085, 1117
BauI	CACGAG	1 cut(s)	628
BbsI	GAAGAC	4 cut(s)	873, 1290, 1647, 1905
Bbv12I	GWGCWC	1 cut(s)	1115
BbvCI	CCTCAGC	1 cut(s)	39
BbvI	GCAGC	4 cut(s)	265, 727, 1019, 1991
BccI	CCATC	8 cut(s)	154, 719, 833, 1675, 1833, 2389, 2456, 2769
BceAI	ACGGC	1 cut(s)	485
BcgI	CGANNNNNNTGC	2 cut(s)	1907, 1941
BciT130I	CCWGG	1 cut(s)	903
BclI	TGATCA	2 cut(s)	396, 2530
BcnI	CCSGG	1 cut(s)	1056
BcoDI	GTCTC	5 cut(s)	129, 613, 799, 1142, 2757
BfaI	CTAG	7 cut(s)	189, 576, 1427, 2157, 2403, 2702, 2721
BfmI	CTRYAG	1 cut(s)	741
BfoI	RGCGCY	1 cut(s)	528
BfrI	CTTAAG	1 cut(s)	2303
BfuAI	ACCTGC	1 cut(s)	2795
BglII	AGATCT	1 cut(s)	1957
BisI	GCNGC	6 cut(s)	279, 741, 935, 1008, 1980, 2620
BlpI	GCTNAGC	2 cut(s)	761, 1114
BlsI	GCNGC	6 cut(s)	280, 742, 936, 1009, 1981, 2621
BmcAI	AGTACT	1 cut(s)	2386
Bme1390I	CCNGG	2 cut(s)	903, 1056
Bme18I	GGWCC	1 cut(s)	1684
BmeT110I	CYCGRG	1 cut(s)	614
BmgBI	CACGTC	1 cut(s)	1768
BmgT120I	GGNCC	1 cut(s)	1684
BmiI	GGNNCC	5 cut(s)	585, 1456, 1464, 2455, 2521
BmrFI	CCNGG	2 cut(s)	903, 1056
BmrI	ACTGGG	2 cut(s)	1183, 1912
BmsI	GCATC	5 cut(s)	265, 379, 526, 1570, 2041
BmuI	ACTGGG	2 cut(s)	1183, 1912
BoxI	GACNNNNGTC	1 cut(s)	141
BpiI	GAAGAC	4 cut(s)	873, 1290, 1647, 1905
BpmI	CTGGAG	3 cut(s)	1179, 1370, 1647
Bpu10I	CCTNAGC	2 cut(s)	39, 1239
Bpu1102I	GCTNAGC	2 cut(s)	761, 1114
BpuEI	CTTGAG	1 cut(s)	776
BpuMI	CCSGG	1 cut(s)	1056
BsaBI	GATNNNNATC	1 cut(s)	14
BsaHI	GRCGYC	1 cut(s)	2622
BsaI	GGTCTC	1 cut(s)	2757
BsaJI	CCNNGG	8 cut(s)	501, 511, 645, 770, 1054, 1458, 1832, 2457
BsaWI	WCCGGW	4 cut(s)	20, 32, 334, 2829
BsaXI	ACNNNNNCTCC	6 cut(s)	27, 57, 937, 967, 1152, 1182
Bsc4I	CCNNNNNNNGG	8 cut(s)	599, 671, 902, 1681, 2291, 2305, 2463, 2551
Bse118I	RCCGGY	1 cut(s)	1552
Bse1I	ACTGG	6 cut(s)	1178, 1353, 1565, 1889, 1907, 2035
Bse21I	CCTNAGG	2 cut(s)	1341, 2546
Bse3DI	GCAATG	2 cut(s)	1500, 2061
Bse8I	GATNNNNATC	1 cut(s)	14
BseBI	CCWGG	1 cut(s)	903
BseDI	CCNNGG	8 cut(s)	501, 511, 645, 770, 1054, 1458, 1832, 2457
BseGI	GGATG	2 cut(s)	2400, 2467
BseJI	GATNNNNATC	1 cut(s)	14
BseLI	CCNNNNNNNGG	8 cut(s)	599, 671, 902, 1681, 2291, 2305, 2463, 2551
BseMI	GCAATG	2 cut(s)	1500, 2061
BseMII	CTCAG	8 cut(s)	30, 993, 1128, 1230, 1332, 1959, 2387, 2560
BseNI	ACTGG	6 cut(s)	1178, 1353, 1565, 1889, 1907, 2035
BseRI	GAGGAG	1 cut(s)	1436
BseXI	GCAGC	4 cut(s)	265, 727, 1019, 1991
BseYI	CCCAGC	2 cut(s)	1278, 2390
BsgI	GTGCAG	2 cut(s)	579, 1223
Bsh1236I	CGCG	2 cut(s)	311, 1460
BshFI	GGCC	2 cut(s)	1694, 1795
BshNI	GGYRCC	2 cut(s)	1454, 2519
BsiHKAI	GWGCWC	1 cut(s)	1115
BsiHKCI	CYCGRG	1 cut(s)	614
BsiSI	CCGG	8 cut(s)	21, 33, 122, 335, 665, 1056, 1553, 2830
BslFI	GGGAC	1 cut(s)	2422
BslI	CCNNNNNNNGG	8 cut(s)	599, 671, 902, 1681, 2291, 2305, 2463, 2551
BsmAI	GTCTC	5 cut(s)	129, 613, 799, 1142, 2757
BsmFI	GGGAC	1 cut(s)	2422
BsmI	GAATGC	4 cut(s)	415, 502, 1233, 2738
BsnI	GGCC	2 cut(s)	1694, 1795
Bso31I	GGTCTC	1 cut(s)	2757
BsoBI	CYCGRG	1 cut(s)	614
Bsp1286I	GDGCHC	1 cut(s)	1115
Bsp1720I	GCTNAGC	2 cut(s)	761, 1114
Bsp19I	CCATGG	1 cut(s)	645
BspACI	CCGC	8 cut(s)	311, 934, 1458, 1460, 1928, 2128, 2619, 2690
BspANI	GGCC	2 cut(s)	1694, 1795
BspCNI	CTCAG	8 cut(s)	31, 994, 1127, 1231, 1333, 1960, 2386, 2559
BspFNI	CGCG	2 cut(s)	311, 1460
BspHI	TCATGA	1 cut(s)	399
BspLI	GGNNCC	5 cut(s)	585, 1456, 1464, 2455, 2521
BspMAI	CTGCAG	1 cut(s)	745
BspMI	ACCTGC	1 cut(s)	2795
BspPI	GGATC	9 cut(s)	156, 584, 841, 1457, 1470, 1508, 2276, 2576, 2830
BspQI	GCTCTTC	1 cut(s)	1089
BspT107I	GGYRCC	2 cut(s)	1454, 2519
BspTI	CTTAAG	1 cut(s)	2303
BspTNI	GGTCTC	1 cut(s)	2757
BsrBI	CCGCTC	1 cut(s)	2690
BsrDI	GCAATG	2 cut(s)	1500, 2061
BsrFI	RCCGGY	1 cut(s)	1552
BsrI	ACTGG	6 cut(s)	1178, 1353, 1565, 1889, 1907, 2035
BssAI	RCCGGY	1 cut(s)	1552
BssECI	CCNNGG	8 cut(s)	501, 511, 645, 770, 1054, 1458, 1832, 2457
BssNAI	GTATAC	1 cut(s)	2081
BssNI	GRCGYC	1 cut(s)	2622
BssSI	CACGAG	1 cut(s)	628
BssT1I	CCWWGG	5 cut(s)	511, 645, 770, 1832, 2457
Bst1107I	GTATAC	1 cut(s)	2081
Bst2BI	CACGAG	1 cut(s)	628
Bst2UI	CCWGG	1 cut(s)	903
Bst4CI	ACNGT	8 cut(s)	852, 1312, 1333, 1666, 1748, 1788, 2041, 2438
Bst6I	CTCTTC	4 cut(s)	539, 1089, 1605, 1629
BstACI	GRCGYC	1 cut(s)	2622
BstAFI	CTTAAG	1 cut(s)	2303
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstC8I	GCNNGC	1 cut(s)	2229
BstDSI	CCRYGG	3 cut(s)	501, 645, 1458
BstEII	GGTNACC	2 cut(s)	506, 2294
BstENI	CCTNNNNNAGG	2 cut(s)	2303, 2549
BstF5I	GGATG	2 cut(s)	2400, 2467
BstFNI	CGCG	2 cut(s)	311, 1460
BstH2I	RGCGCY	1 cut(s)	528
BstHHI	GCGC	3 cut(s)	271, 376, 527
BstMAI	GTCTC	5 cut(s)	129, 613, 799, 1142, 2757
BstNI	CCWGG	1 cut(s)	903
BstPAI	GACNNNNGTC	1 cut(s)	141
BstPI	GGTNACC	2 cut(s)	506, 2294
BstSCI	CCNGG	2 cut(s)	901, 1054
BstSFI	CTRYAG	1 cut(s)	741
BstUI	CGCG	2 cut(s)	311, 1460
BstV1I	GCAGC	4 cut(s)	265, 727, 1019, 1991
BstV2I	GAAGAC	4 cut(s)	873, 1290, 1647, 1905
BstX2I	RGATCY	5 cut(s)	161, 589, 1462, 1500, 1957
BstXI	CCANNNNNNTGG	1 cut(s)	1839
BstYI	RGATCY	5 cut(s)	161, 589, 1462, 1500, 1957
BstZ17I	GTATAC	1 cut(s)	2081
Bsu36I	CCTNAGG	2 cut(s)	1341, 2546
BsuRI	GGCC	2 cut(s)	1694, 1795
BtgI	CCRYGG	3 cut(s)	501, 645, 1458
BtgZI	GCGATG	2 cut(s)	132, 1852
BtrI	CACGTC	1 cut(s)	1768
BtsCI	GGATG	2 cut(s)	2400, 2467
BtsI	GCAGTG	2 cut(s)	1206, 2830
BtsIMutI	CAGTG	5 cut(s)	1206, 1346, 1753, 2341, 2830
BveI	ACCTGC	1 cut(s)	2795
Cac8I	GCNNGC	1 cut(s)	2229
CaiI	CAGNNNCTG	3 cut(s)	278, 593, 1571
CciI	TCATGA	1 cut(s)	399
CfoI	GCGC	3 cut(s)	271, 376, 527
Cfr10I	RCCGGY	1 cut(s)	1552
Cfr13I	GGNCC	1 cut(s)	1684
Cfr42I	CCGCGG	1 cut(s)	1461
CseI	GACGC	5 cut(s)	131, 224, 1295, 2253, 2611
CsiI	ACCWGGT	1 cut(s)	901
Csp6I	GTAC	4 cut(s)	304, 1784, 2089, 2385
CspCI	CAANNNNNGTGG	2 cut(s)	1952, 1987
CviAII	CATG	9 cut(s)	400, 646, 1372, 1394, 1718, 2084, 2279, 2419, 2886
CviQI	GTAC	4 cut(s)	304, 1784, 2089, 2385
DraI	TTTAAA	1 cut(s)	1266
DraIII	CACNNNGTG	1 cut(s)	1110
DrdI	GACNNNNNNGTC	1 cut(s)	2785
DseDI	GACNNNNNNGTC	1 cut(s)	2785
EaeI	YGGCCR	2 cut(s)	1692, 1793
Eam1104I	CTCTTC	4 cut(s)	539, 1089, 1605, 1629
EarI	CTCTTC	4 cut(s)	539, 1089, 1605, 1629
Eco130I	CCWWGG	5 cut(s)	511, 645, 770, 1832, 2457
Eco31I	GGTCTC	1 cut(s)	2757
Eco32I	GATATC	1 cut(s)	1132
Eco47I	GGWCC	1 cut(s)	1684
Eco47III	AGCGCT	1 cut(s)	526
Eco57I	CTGAAG	3 cut(s)	1092, 1112, 1508
Eco81I	CCTNAGG	2 cut(s)	1341, 2546
Eco88I	CYCGRG	1 cut(s)	614
Eco91I	GGTNACC	2 cut(s)	506, 2294
EcoNI	CCTNNNNNAGG	2 cut(s)	2303, 2549
EcoO65I	GGTNACC	2 cut(s)	506, 2294
EcoRII	CCWGG	1 cut(s)	901
EcoRV	GATATC	1 cut(s)	1132
EcoT14I	CCWWGG	5 cut(s)	511, 645, 770, 1832, 2457
EcoT22I	ATGCAT	1 cut(s)	1235
ErhI	CCWWGG	5 cut(s)	511, 645, 770, 1832, 2457
FaeI	CATG	9 cut(s)	403, 649, 1375, 1397, 1721, 2087, 2282, 2422, 2889
FaqI	GGGAC	1 cut(s)	2422
FatI	CATG	9 cut(s)	399, 645, 1371, 1393, 1717, 2083, 2278, 2418, 2885
FauNDI	CATATG	2 cut(s)	2221, 2858
FbaI	TGATCA	2 cut(s)	396, 2530
FblI	GTMKAC	3 cut(s)	2080, 2267, 2748
Fnu4HI	GCNGC	6 cut(s)	279, 741, 935, 1008, 1980, 2620
FokI	GGATG	2 cut(s)	2407, 2474
Fsp4HI	GCNGC	6 cut(s)	279, 741, 935, 1008, 1980, 2620
FspBI	CTAG	7 cut(s)	189, 576, 1427, 2157, 2403, 2702, 2721
FspI	TGCGCA	1 cut(s)	375
GlaI	GCGC	3 cut(s)	270, 375, 526
GluI	GCNGC	6 cut(s)	279, 741, 935, 1008, 1980, 2620
GsaI	CCCAGC	2 cut(s)	1282, 2394
GsuI	CTGGAG	3 cut(s)	1179, 1370, 1647
HaeII	RGCGCY	1 cut(s)	528
HaeIII	GGCC	2 cut(s)	1694, 1795
HapII	CCGG	8 cut(s)	21, 33, 122, 335, 665, 1056, 1553, 2830
HgaI	GACGC	5 cut(s)	131, 224, 1295, 2253, 2611
HhaI	GCGC	3 cut(s)	271, 376, 527
Hin1I	GRCGYC	1 cut(s)	2622
Hin1II	CATG	9 cut(s)	403, 649, 1375, 1397, 1721, 2087, 2282, 2422, 2889
Hin6I	GCGC	3 cut(s)	269, 374, 525
HinP1I	GCGC	3 cut(s)	269, 374, 525
HincII	GTYRAC	4 cut(s)	945, 1068, 1171, 2749
HindII	GTYRAC	4 cut(s)	945, 1068, 1171, 2749
HinfI	GANTC	8 cut(s)	15, 227, 259, 612, 641, 1064, 1252, 1843
HpaII	CCGG	8 cut(s)	21, 33, 122, 335, 665, 1056, 1553, 2830
HphI	GGTGA	6 cut(s)	187, 324, 545, 1211, 1567, 2306
Hpy99I	CGWCG	6 cut(s)	87, 95, 98, 157, 218, 2753
HpyCH4III	ACNGT	8 cut(s)	852, 1312, 1333, 1666, 1748, 1788, 2041, 2438
HpyCH4IV	ACGT	3 cut(s)	1141, 1167, 1767
HpySE526I	ACGT	3 cut(s)	1141, 1167, 1767
Hsp92I	GRCGYC	1 cut(s)	2622
Hsp92II	CATG	9 cut(s)	403, 649, 1375, 1397, 1721, 2087, 2282, 2422, 2889
HspAI	GCGC	3 cut(s)	269, 374, 525
Ksp22I	TGATCA	2 cut(s)	396, 2530
KspI	CCGCGG	1 cut(s)	1461
LguI	GCTCTTC	1 cut(s)	1089
LmnI	GCTCC	4 cut(s)	35, 583, 958, 1423
Lsp1109I	GCAGC	4 cut(s)	265, 727, 1019, 1991
LweI	GCATC	5 cut(s)	265, 379, 526, 1570, 2041
MabI	ACCWGGT	1 cut(s)	901
MaeI	CTAG	7 cut(s)	189, 576, 1427, 2157, 2403, 2702, 2721
MaeII	ACGT	3 cut(s)	1141, 1167, 1767
MaeIII	GTNAC	7 cut(s)	208, 506, 1567, 1825, 2294, 2723, 2825
MbiI	CCGCTC	1 cut(s)	2690
MfeI	CAATTG	1 cut(s)	1437
MflI	RGATCY	5 cut(s)	161, 589, 1462, 1500, 1957
MhlI	GDGCHC	1 cut(s)	1115
MlsI	TGGCCA	2 cut(s)	1694, 1795
MluNI	TGGCCA	2 cut(s)	1694, 1795
MlyI	GAGTC	2 cut(s)	606, 1073
MmeI	TCCRAC	2 cut(s)	2473, 2593
Mox20I	TGGCCA	2 cut(s)	1694, 1795
Mph1103I	ATGCAT	1 cut(s)	1235
MroXI	GAANNNNTTC	2 cut(s)	1182, 1803
MscI	TGGCCA	2 cut(s)	1694, 1795
MslI	CAYNNNNRTG	1 cut(s)	2222
Msp20I	TGGCCA	2 cut(s)	1694, 1795
MspA1I	CMGCKG	1 cut(s)	1460
MspCI	CTTAAG	1 cut(s)	2303
MspI	CCGG	8 cut(s)	21, 33, 122, 335, 665, 1056, 1553, 2830
MspR9I	CCNGG	2 cut(s)	903, 1056
MunI	CAATTG	1 cut(s)	1437
Mva1269I	GAATGC	4 cut(s)	415, 502, 1233, 2738
MvaI	CCWGG	1 cut(s)	903
MvnI	CGCG	2 cut(s)	311, 1460
NciI	CCSGG	1 cut(s)	1056
NcoI	CCATGG	1 cut(s)	645
NdeI	CATATG	2 cut(s)	2221, 2858
NlaIII	CATG	9 cut(s)	403, 649, 1375, 1397, 1721, 2087, 2282, 2422, 2889
NlaIV	GGNNCC	5 cut(s)	585, 1456, 1464, 2455, 2521
NmuCI	GTSAC	2 cut(s)	2294, 2825
NsbI	TGCGCA	1 cut(s)	375
NsiI	ATGCAT	1 cut(s)	1235
OliI	CACNNNNGTG	1 cut(s)	2222
PagI	TCATGA	1 cut(s)	399
PciSI	GCTCTTC	1 cut(s)	1089
PcsI	WCGNNNNNNNCGW	3 cut(s)	222, 260, 290
PctI	GAATGC	4 cut(s)	415, 502, 1233, 2738
PdmI	GAANNNNTTC	2 cut(s)	1182, 1803
PfeI	GAWTC	6 cut(s)	15, 227, 259, 641, 1252, 1843
PflFI	GACNNNGTC	2 cut(s)	1153, 1904
PkrI	GCNGC	6 cut(s)	280, 742, 936, 1009, 1981, 2621
PleI	GAGTC	2 cut(s)	606, 1072
PpsI	GAGTC	2 cut(s)	606, 1072
PshAI	GACNNNNGTC	1 cut(s)	141
PsiI	TTATAA	2 cut(s)	909, 1877
Psp6I	CCWGG	1 cut(s)	901
PspEI	GGTNACC	2 cut(s)	506, 2294
PspFI	CCCAGC	2 cut(s)	1278, 2390
PspGI	CCWGG	1 cut(s)	901
PspN4I	GGNNCC	5 cut(s)	585, 1456, 1464, 2455, 2521
PspPI	GGNCC	1 cut(s)	1684
PsrI	GAACNNNNNNTAC	4 cut(s)	686, 718, 2020, 2052
PstI	CTGCAG	1 cut(s)	745
PstNI	CAGNNNCTG	3 cut(s)	278, 593, 1571
PsuI	RGATCY	5 cut(s)	161, 589, 1462, 1500, 1957
PsyI	GACNNNGTC	2 cut(s)	1153, 1904
RsaI	GTAC	4 cut(s)	305, 1785, 2090, 2386
RsaNI	GTAC	4 cut(s)	304, 1784, 2089, 2385
RseI	CAYNNNNRTG	1 cut(s)	2222
SacII	CCGCGG	1 cut(s)	1461
SalI	GTCGAC	1 cut(s)	2747
SapI	GCTCTTC	1 cut(s)	1089
SatI	GCNGC	6 cut(s)	279, 741, 935, 1008, 1980, 2620
Sau96I	GGNCC	1 cut(s)	1684
ScaI	AGTACT	1 cut(s)	2386
SchI	GAGTC	2 cut(s)	606, 1073
ScrFI	CCNGG	2 cut(s)	903, 1056
SduI	GDGCHC	1 cut(s)	1115
SexAI	ACCWGGT	1 cut(s)	901
SfaNI	GCATC	5 cut(s)	265, 379, 526, 1570, 2041
SfcI	CTRYAG	1 cut(s)	741
Sfr303I	CCGCGG	1 cut(s)	1461
SgrBI	CCGCGG	1 cut(s)	1461
SinI	GGWCC	1 cut(s)	1684
SmiMI	CAYNNNNRTG	1 cut(s)	2222
SmlI	CTYRAG	2 cut(s)	755, 2303
SmoI	CTYRAG	2 cut(s)	755, 2303
SsiI	CCGC	8 cut(s)	311, 934, 1458, 1460, 1928, 2128, 2619, 2690
SspI	AATATT	1 cut(s)	2866
SspMI	CTAG	7 cut(s)	189, 576, 1427, 2157, 2403, 2702, 2721
StyD4I	CCNGG	2 cut(s)	901, 1054
StyI	CCWWGG	5 cut(s)	511, 645, 770, 1832, 2457
TaaI	ACNGT	8 cut(s)	852, 1312, 1333, 1666, 1748, 1788, 2041, 2438
TaiI	ACGT	3 cut(s)	1144, 1170, 1770
TatI	WGTACW	2 cut(s)	2088, 2384
TauI	GCSGC	2 cut(s)	937, 2622
TfiI	GAWTC	6 cut(s)	15, 227, 259, 641, 1252, 1843
TscAI	CASTG	5 cut(s)	1206, 1353, 1753, 2341, 2830
TseFI	GTSAC	2 cut(s)	2294, 2825
TseI	GCWGC	4 cut(s)	278, 740, 1007, 1979
Tsp45I	GTSAC	2 cut(s)	2294, 2825
TspGWI	ACGGA	4 cut(s)	111, 252, 1616, 1676
TspRI	CASTG	5 cut(s)	1206, 1353, 1753, 2341, 2830
Tth111I	GACNNNGTC	2 cut(s)	1153, 1904
Vha464I	CTTAAG	1 cut(s)	2303
VpaK11BI	GGWCC	1 cut(s)	1684
XagI	CCTNNNNNAGG	2 cut(s)	2303, 2549
XapI	RAATTY	5 cut(s)	1181, 1802, 2246, 2423, 2503
XmiI	GTMKAC	3 cut(s)	2080, 2267, 2748
XmnI	GAANNNNTTC	2 cut(s)	1182, 1803
XspI	CTAG	7 cut(s)	189, 576, 1427, 2157, 2403, 2702, 2721
ZrmI	AGTACT	1 cut(s)	2386
Zsp2I	ATGCAT	1 cut(s)	1235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.