Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Reverse (-)

82102970 .. 82109269

Gene Structure 6300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG600200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2973 bp

ATGGCGGTTTCTCAATTCTCTTGTAGTGGAGCAATGGAGTCTTTGCACTACAAATCGCAGGGGAAACTGATCGATTTCGGCTCCAGGAGGAGGTTCAGTTCGAGGTTGTTGCTGGCGAGGACGTTGAATTTGAATCCGAGGACTCATCGGAGCCGCCACCGGAGGTCGGTTCTGGTCACCAACGTCATAAAGGATCCGGACGTCGCACAAGAAAATACAGGCAGCTCATTCACACCTGATGCTGTATCCGTCGCTTCAAGTATCAAATACCATGCTGAGTTTACGCCGTCGTTTTCTCCGGAGAAATTTGAGCTTCCAAAGGCCTACTTTGCAACTGCACAAAGTGTCCGTGATGCGCTCATTGTTAACTGGAATGCAACGAATGAATATTATGAAAAGTTGCATGTAAAGCAGGCATATTATTTGTCAATGGAATTTCTACAGGGTAGAGCGCTGTTAAATGCAGTTGGTAATTTGGAGCTAGCAGGCGCATATGCAGAGGCTTTAAGCAAGCTTGGACACAAATTAGAAACTGTGGCTGACCAGGAGCCAGATGCTGCCCTCGGGAATGGGGGTCTCGGTCGGCTTGCCTCATGCTTCTTGGATTCTTTGGCAACTTTGAACTACCCAGCATGGGGTTATGGACTTAGGTACAAGTATGGGTTATTTAAACAGCGAATTACCAAAGACGGTCAAGAAGAAGTAGCTGAGGATTGGCTTGAGCTGGGAAATCCCTGGGAGATTGTGAGGAATGATGTTTCTTATCATGTAAAATTCTACGGTAATGTTGCTACTGGATCAGACGGAAAACGGCATTGGATTGGAGGAGAAGATATTGAGGCTGTTGCTTATGATGTTCCAATACCAGGATACAAAACAAAAACTACTATCAACTTGCGGCTTTGGTCAACCAAAGCTCCGTCAGAGGATTTTGATTTATATTCTTTTAATTCTGGGGAGCACACAAAAGCATGTGAAGCTTTAGCAAATGCCGAAAAGATTTGCTATGTACTTTATCCTGGCGATGACTCACTGGAGGGAAAGACACTTCGTCTGAAGCAACAATATACTTTATGTTCAGCTTCTCTCCAAGATATTGTTGCACGTTTTGAGAGAAGATCCGGAACAAACCTAAACTGGGAAGAGTTCCCCGAGAAGGTTGCAGTGCAGATGAATGACACTCATCCAACTCTCTGCATTCCTGAGCTGATTAGGATTTTAATGGATTTGAAGGGTTTGACATGGAAGGAGGCCTGGAATATTACTCAAAGAACGGTTGCATATACAAACCATACTGTTCTACCTGAGGCATTGGAGAAATGGAGTTTGGAACTTATGCAGAAGCTGCTTCCTCGACATGTGGAGATCATAGAACTGATAGATGAGGAGCTCATTAACACCATAGTCTCGGAGTATGGTACAGAAGATTGTGATTTATTAGAAAAGAAACTGAAGGAGATGAGAATCTTAGAAAATGTTGATTTGCCTGCCACATATGCAAAGTTATTTGTTAAACCCAAAGAAAGCTCCGTTGTTCTTCCCACTGAAAAACTTGAAGATTCAAAAAAGGATGTCGGGGCCGTTGATGAAGAAATTGCGCAAAAACTTGAAGACTCAAAAAAGGATGTCAGGGCCATTGATGAAGAAATTGAGCCTGAGAAGAAACCCATAGAGGAAAAGGATGTCGGGGCCATTGATGAAGAAATTGAGCCTAAGAAGAAACCCATAGAGGAAAAGAAAAAGGCACCCCCAAAACCACCTAAGCTAGTTCGTATGGCAAACCTTTGTGTTGTAGGTGGTCATGCAGTAAATGGTGTTGCTGAGATACATAGTGAAATAGTAAAGGATGAAGTATTCAATTCATTTTATAAATTGTGGCCTAAGAAGTTTCAAAACAAGACAAATGGCGTGACACCAAGAAGATGGATCCGCTTCTGCAATCCAGATTTGAGTAATATTCTAACCAAATGGATTGGCACAGAAGACTGGGTCTTAAATACAGAAAAACTGGCCGAGTTACGACAGTTTGCGGATGATGAGGATCTCCAAACTCAATGGAGGCAAGCAAAAAGGAGCAACAAGTTGAAAGTTGCATCATTCATTAAAGAAAAAACAGGATTTTCTGTCAACCCTGATGCAATGTTTGATATCCAGGTGAAGCGCATTCATGAATACAAGAGACAACTTATGAATATTTTGGGAATTGTTTACCGGTACAAGAAAATGAAAGAAATGAGTGCTTCACAAAGGAAAGCAAAGTTTGTTCCACGTGTTTGTATGTTCGGAGGAAAAGCATTTGCAACGTATGTACAAGCCAAGAGAATTGTGAAGTTTATCACAGATGTCGCGGAGACTGTAAATCATGATCCTAGTATAGGTGATCTACTAAAGGTTATCTTTGTACCTGATTATAATGTCAGTGTTGCTGAATTATTAATTCCTGCAAGTGAGCTCTCACAGCACATCAGCACTGCTGGGATGGAGGCCAGTGGCACCAGCAACATGAAGTTTGCAATGAATGGCTGCATCCTAATTGGGACTCTGGATGGAGCCAATGTTGAAATAAGAGAAGAGGTTGGAGCAGATAACTTTTTCCTCTTTGGTGCTGAAGCTCATGAGATTGCTGGGCTGAGAAAAGAACGAGCTGAGGGGAAGTTTGTTCCAGACCCCCGTTTTGAAGAAGTCAAGGAATTTGTCACAAGTGGTGTTTTTGGGTTGTACGATTATGATGACCTGATCGGATCCTTGGAAGGAAATGAAGGATTTGGTCGTGCTGATTACTTCCTTGTTGGCAAAGACTTCCCCAGTTACATAGAATGCCAAGAGAAGGTTGATGAGGCGTATCGGGACCAAAAGAAATGGACAAGAATGTCAATCCTGAACACAGCAGGCTCATCCAAGTTTAGCAGTGACAGAACCATCCACGAATATGCTAAAGACATATGGAACATTAACCCTGTCGAATTACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009414 GO:0009415 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009987 GO:0010035 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

990

Amino Acids

112.22

Weight (kDa)

5.81

Isoelectric Point (pI)

42.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	170 - 492	4.7e-128	Carbohydrate phosphorylase
Phosphorylase	PF00343	584 - 984	9e-167	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1869, 2412
AasI	GACNNNNNNGTC	1 cut(s)	2869
AatII	GACGTC	1 cut(s)	204
Acc16I	TGCGCA	1 cut(s)	1599
AccB1I	GGYRCC	2 cut(s)	1744, 2492
AccII	CGCG	1 cut(s)	2348
AccIII	TCCGGA	3 cut(s)	196, 298, 1121
AciI	CCGC	6 cut(s)	5, 154, 898, 1930, 2030, 2348
AcoI	YGGCCR	1 cut(s)	2010
AcsI	RAATTY	5 cut(s)	127, 305, 434, 773, 2690
AcuI	CTGAAG	3 cut(s)	1076, 1472, 2628
AcvI	CACGTG	1 cut(s)	2270
AcyI	GRCGYC	1 cut(s)	201
AdeI	CACNNNGTG	1 cut(s)	344
AfaI	GTAC	7 cut(s)	653, 1011, 1420, 2216, 2310, 2403, 2720
AfeI	AGCGCT	1 cut(s)	453
AfiI	CCNNNNNNNGG	9 cut(s)	90, 166, 634, 635, 866, 1138, 1156, 2375, 2827
AflIII	ACRYGT	2 cut(s)	1357, 2269
AgeI	ACCGGT	1 cut(s)	2211
AhdI	GACNNNNNGTC	1 cut(s)	1050
AjnI	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2151
AjuI	GAANNNNNNNTTGG	4 cut(s)	799, 831, 1310, 1342
AloI	GAACNNNNNNTCC	2 cut(s)	82, 114
Alw21I	GWGCWC	3 cut(s)	963, 1392, 2454
Alw26I	GTCTC	4 cut(s)	581, 1411, 2173, 2345
AlwNI	CAGNNNCTG	2 cut(s)	557, 1345
Ama87I	CYCGRG	2 cut(s)	563, 1151
Aor13HI	TCCGGA	3 cut(s)	196, 298, 1121
Aor51HI	AGCGCT	1 cut(s)	453
AoxI	GGCC	8 cut(s)	321, 1251, 1578, 1632, 1689, 1877, 2010, 2484
ApeKI	GCWGC	4 cut(s)	222, 557, 1345, 2523
ApoI	RAATTY	5 cut(s)	127, 305, 434, 773, 2690
ArsI	GACNNNNNNTTYG	4 cut(s)	112, 144, 2657, 2689
AseI	ATTAAT	1 cut(s)	2435
AsiGI	ACCGGT	1 cut(s)	2211
AspLEI	GCGC	5 cut(s)	358, 454, 491, 1600, 2163
AspS9I	GGNCC	4 cut(s)	1578, 1632, 1689, 2848
AsuHPI	GGTGA	3 cut(s)	169, 2167, 2390
AsuNHI	GCTAGC	1 cut(s)	481
AvaI	CYCGRG	2 cut(s)	563, 1151
AvaII	GGWCC	1 cut(s)	2848
AxyI	CCTNAGG	1 cut(s)	1305
BamHI	GGATCC	3 cut(s)	193, 1926, 2741
BanI	GGYRCC	2 cut(s)	1744, 2492
BanII	GRGCYC	2 cut(s)	1392, 2454
BbrPI	CACGTG	1 cut(s)	2270
BbsI	GAAGAC	2 cut(s)	1617, 1989
Bbv12I	GWGCWC	3 cut(s)	963, 1392, 2454
BbvCI	CCTCAGC	2 cut(s)	708, 2646
BbvI	GCAGC	4 cut(s)	234, 544, 1332, 2510
BccI	CCATC	4 cut(s)	1917, 2473, 2540, 2927
BceAI	ACGGC	3 cut(s)	271, 827, 1565
BcgI	CGANNNNNNTGC	4 cut(s)	91, 125, 1142, 1176
BciT130I	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
BciVI	GTATCC	2 cut(s)	256, 863
BcoDI	GTCTC	4 cut(s)	581, 1411, 2173, 2345
BfaI	CTAG	3 cut(s)	482, 1766, 2370
BfmI	CTRYAG	1 cut(s)	440
BfoI	RGCGCY	1 cut(s)	455
BfuI	GTATCC	2 cut(s)	256, 863
BisI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2524
BlsI	GCNGC	6 cut(s)	155, 224, 559, 900, 1347, 2525
Bme1390I	CCNGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
Bme18I	GGWCC	1 cut(s)	2848
BmeRI	GACNNNNNGTC	1 cut(s)	1050
BmeT110I	CYCGRG	2 cut(s)	563, 1151
BmgT120I	GGNCC	4 cut(s)	1578, 1632, 1689, 2848
BmrFI	CCNGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
BmrI	ACTGGG	3 cut(s)	1147, 1996, 2799
BmsI	GCATC	6 cut(s)	229, 343, 544, 2102, 2125, 2535
BmtI	GCTAGC	1 cut(s)	485
BmuI	ACTGGG	3 cut(s)	1147, 1996, 2799
BpiI	GAAGAC	2 cut(s)	1617, 1989
BpmI	CTGGAG	2 cut(s)	67, 1055
Bpu10I	CCTNAGC	4 cut(s)	708, 1203, 1761, 2646
BpuEI	CTTGAG	1 cut(s)	740
Bsa29I	ATCGAT	1 cut(s)	72
BsaAI	YACGTR	1 cut(s)	2270
BsaBI	GATNNNNATC	2 cut(s)	1463, 2040
BsaHI	GRCGYC	1 cut(s)	201
BsaI	GGTCTC	1 cut(s)	581
BsaJI	CCNNGG	5 cut(s)	137, 562, 734, 735, 2745
BsaWI	WCCGGW	5 cut(s)	159, 196, 298, 1121, 2211
BsaXI	ACNNNNNCTCC	6 cut(s)	82, 112, 901, 931, 2541, 2571
Bsc4I	CCNNNNNNNGG	9 cut(s)	90, 166, 634, 635, 866, 1138, 1156, 2375, 2827
Bse118I	RCCGGY	1 cut(s)	2211
Bse1I	ACTGG	8 cut(s)	374, 799, 1038, 1142, 1991, 2013, 2487, 2805
Bse21I	CCTNAGG	1 cut(s)	1305
Bse3DI	GCAATG	3 cut(s)	39, 2145, 2520
Bse8I	GATNNNNATC	2 cut(s)	1463, 2040
BseAI	TCCGGA	3 cut(s)	196, 298, 1121
BseBI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
BseCI	ATCGAT	1 cut(s)	72
BseDI	CCNNGG	5 cut(s)	137, 562, 734, 735, 2745
BseJI	GATNNNNATC	2 cut(s)	1463, 2040
BseLI	CCNNNNNNNGG	9 cut(s)	90, 166, 634, 635, 866, 1138, 1156, 2375, 2827
BseMI	GCAATG	3 cut(s)	39, 2145, 2520
BseMII	CTCAG	8 cut(s)	267, 699, 1194, 1296, 1647, 1812, 2621, 2637
BseNI	ACTGG	8 cut(s)	374, 799, 1038, 1142, 1991, 2013, 2487, 2805
BseRI	GAGGAG	3 cut(s)	103, 840, 1400
BseXI	GCAGC	4 cut(s)	234, 544, 1332, 2510
BseYI	CCCAGC	4 cut(s)	628, 724, 2474, 2624
BsgI	GTGCAG	2 cut(s)	321, 1187
Bsh1236I	CGCG	1 cut(s)	2348
Bsh1285I	CGRYCG	1 cut(s)	583
BshFI	GGCC	8 cut(s)	323, 1253, 1580, 1634, 1691, 1879, 2012, 2486
BshNI	GGYRCC	2 cut(s)	1744, 2492
BshTI	ACCGGT	1 cut(s)	2211
BshVI	ATCGAT	1 cut(s)	72
BsiEI	CGRYCG	1 cut(s)	583
BsiHKAI	GWGCWC	3 cut(s)	963, 1392, 2454
BsiHKCI	CYCGRG	2 cut(s)	563, 1151
BsiSI	CCGG	5 cut(s)	160, 197, 299, 1122, 2212
BslFI	GGGAC	2 cut(s)	2551, 2861
BslI	CCNNNNNNNGG	9 cut(s)	90, 166, 634, 635, 866, 1138, 1156, 2375, 2827
BsmAI	GTCTC	4 cut(s)	581, 1411, 2173, 2345
BsmFI	GGGAC	2 cut(s)	2551, 2861
BsmI	GAATGC	4 cut(s)	379, 1197, 2163, 2822
BsnI	GGCC	8 cut(s)	323, 1253, 1580, 1634, 1691, 1879, 2012, 2486
Bso31I	GGTCTC	1 cut(s)	581
BsoBI	CYCGRG	2 cut(s)	563, 1151
Bsp1286I	GDGCHC	3 cut(s)	963, 1392, 2454
Bsp13I	TCCGGA	3 cut(s)	196, 298, 1121
Bsp1407I	TGTACA	1 cut(s)	2308
BspACI	CCGC	6 cut(s)	5, 154, 898, 1930, 2030, 2348
BspANI	GGCC	8 cut(s)	323, 1253, 1580, 1634, 1691, 1879, 2012, 2486
BspCNI	CTCAG	8 cut(s)	268, 700, 1195, 1297, 1648, 1813, 2622, 2638
BspDI	ATCGAT	1 cut(s)	72
BspEI	TCCGGA	3 cut(s)	196, 298, 1121
BspFNI	CGCG	1 cut(s)	2348
BspHI	TCATGA	3 cut(s)	2167, 2362, 2614
BspOI	GCTAGC	1 cut(s)	485
BspT107I	GGYRCC	2 cut(s)	1744, 2492
BspTNI	GGTCTC	1 cut(s)	581
BsrDI	GCAATG	3 cut(s)	39, 2145, 2520
BsrFI	RCCGGY	1 cut(s)	2211
BsrGI	TGTACA	1 cut(s)	2308
BsrI	ACTGG	8 cut(s)	374, 799, 1038, 1142, 1991, 2013, 2487, 2805
BssAI	RCCGGY	1 cut(s)	2211
BssECI	CCNNGG	5 cut(s)	137, 562, 734, 735, 2745
BssNI	GRCGYC	1 cut(s)	201
BssT1I	CCWWGG	1 cut(s)	2745
Bst2UI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
Bst4CI	ACNGT	8 cut(s)	535, 692, 782, 1276, 1297, 2025, 2356, 2970
Bst6I	CTCTTC	2 cut(s)	1137, 2565
BstACI	GRCGYC	1 cut(s)	201
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstAUI	TGTACA	1 cut(s)	2308
BstBAI	YACGTR	1 cut(s)	2270
BstC8I	GCNNGC	9 cut(s)	114, 414, 483, 487, 512, 588, 1488, 2064, 2890
BstEII	GGTNACC	1 cut(s)	175
BstENI	CCTNNNNNAGG	1 cut(s)	2373
BstFNI	CGCG	1 cut(s)	2348
BstH2I	RGCGCY	1 cut(s)	455
BstHHI	GCGC	5 cut(s)	358, 454, 491, 1600, 2163
BstMAI	GTCTC	4 cut(s)	581, 1411, 2173, 2345
BstMCI	CGRYCG	1 cut(s)	583
BstMWI	GCNNNNNNNGC	6 cut(s)	329, 409, 977, 1345, 1496, 2458
BstNI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
BstNSI	RCATGY	3 cut(s)	407, 975, 1361
BstPI	GGTNACC	1 cut(s)	175
BstSCI	CCNGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2151
BstSFI	CTRYAG	1 cut(s)	440
BstUI	CGCG	1 cut(s)	2348
BstV1I	GCAGC	4 cut(s)	234, 544, 1332, 2510
BstV2I	GAAGAC	2 cut(s)	1617, 1989
BstX2I	RGATCY	5 cut(s)	193, 1118, 1926, 2041, 2741
BstXI	CCANNNNNNTGG	1 cut(s)	1923
BstYI	RGATCY	5 cut(s)	193, 1118, 1926, 2041, 2741
Bsu15I	ATCGAT	1 cut(s)	72
Bsu36I	CCTNAGG	1 cut(s)	1305
BsuI	GTATCC	2 cut(s)	256, 863
BsuRI	GGCC	8 cut(s)	323, 1253, 1580, 1634, 1691, 1879, 2012, 2486
BsuTUI	ATCGAT	1 cut(s)	72
BtgZI	GCGATG	1 cut(s)	1038
BtsI	GCAGTG	3 cut(s)	1170, 2469, 2914
BtsIMutI	CAGTG	7 cut(s)	1031, 1170, 1542, 2425, 2469, 2494, 2914
Cac8I	GCNNGC	9 cut(s)	114, 414, 483, 487, 512, 588, 1488, 2064, 2890
CaiI	CAGNNNCTG	2 cut(s)	557, 1345
CciI	TCATGA	3 cut(s)	2167, 2362, 2614
CfoI	GCGC	5 cut(s)	358, 454, 491, 1600, 2163
Cfr10I	RCCGGY	1 cut(s)	2211
Cfr13I	GGNCC	4 cut(s)	1578, 1632, 1689, 2848
ClaI	ATCGAT	1 cut(s)	72
Csp6I	GTAC	7 cut(s)	652, 1010, 1419, 2215, 2309, 2402, 2719
CspAI	ACCGGT	1 cut(s)	2211
CviQI	GTAC	7 cut(s)	652, 1010, 1419, 2215, 2309, 2402, 2719
DraI	TTTAAA	1 cut(s)	670
DraIII	CACNNNGTG	1 cut(s)	344
DrdI	GACNNNNNNGTC	1 cut(s)	2869
DriI	GACNNNNNGTC	1 cut(s)	1050
DseDI	GACNNNNNNGTC	1 cut(s)	2869
EaeI	YGGCCR	1 cut(s)	2010
Eam1104I	CTCTTC	2 cut(s)	1137, 2565
Eam1105I	GACNNNNNGTC	1 cut(s)	1050
EarI	CTCTTC	2 cut(s)	1137, 2565
Ecl136II	GAGCTC	2 cut(s)	1390, 2452
Eco130I	CCWWGG	1 cut(s)	2745
Eco147I	AGGCCT	2 cut(s)	323, 1253
Eco24I	GRGCYC	2 cut(s)	1392, 2454
Eco31I	GGTCTC	1 cut(s)	581
Eco32I	GATATC	1 cut(s)	2149
Eco47I	GGWCC	1 cut(s)	2848
Eco47III	AGCGCT	1 cut(s)	453
Eco53kI	GAGCTC	2 cut(s)	1390, 2452
Eco57I	CTGAAG	3 cut(s)	1076, 1472, 2628
Eco72I	CACGTG	1 cut(s)	2270
Eco81I	CCTNAGG	1 cut(s)	1305
Eco88I	CYCGRG	2 cut(s)	563, 1151
Eco91I	GGTNACC	1 cut(s)	175
EcoICRI	GAGCTC	2 cut(s)	1390, 2452
EcoNI	CCTNNNNNAGG	1 cut(s)	2373
EcoO65I	GGTNACC	1 cut(s)	175
EcoRII	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2151
EcoRV	GATATC	1 cut(s)	2149
EcoT14I	CCWWGG	1 cut(s)	2745
EcoT38I	GRGCYC	2 cut(s)	1392, 2454
ErhI	CCWWGG	1 cut(s)	2745
FalI	AAGNNNNNCTT	4 cut(s)	311, 343, 2381, 2413
FaqI	GGGAC	2 cut(s)	2551, 2861
FauNDI	CATATG	3 cut(s)	493, 1495, 2942
Fnu4HI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2524
FriOI	GRGCYC	2 cut(s)	1392, 2454
Fsp4HI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2524
FspBI	CTAG	3 cut(s)	482, 1766, 2370
FspI	TGCGCA	1 cut(s)	1599
GlaI	GCGC	5 cut(s)	357, 453, 490, 1599, 2162
GluI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2524
GsaI	CCCAGC	4 cut(s)	632, 728, 2478, 2628
GsuI	CTGGAG	2 cut(s)	67, 1055
HaeII	RGCGCY	1 cut(s)	455
HaeIII	GGCC	8 cut(s)	323, 1253, 1580, 1634, 1691, 1879, 2012, 2486
HapII	CCGG	5 cut(s)	160, 197, 299, 1122, 2212
HhaI	GCGC	5 cut(s)	358, 454, 491, 1600, 2163
Hin1I	GRCGYC	1 cut(s)	201
Hin6I	GCGC	5 cut(s)	356, 452, 489, 1598, 2161
HinP1I	GCGC	5 cut(s)	356, 452, 489, 1598, 2161
HincII	GTYRAC	3 cut(s)	367, 909, 2128
HindII	GTYRAC	3 cut(s)	367, 909, 2128
HindIII	AAGCTT	2 cut(s)	512, 978
HinfI	GANTC	9 cut(s)	38, 133, 142, 605, 1028, 1464, 1559, 1613, 2539
HpaI	GTTAAC	1 cut(s)	367
HpaII	CCGG	5 cut(s)	160, 197, 299, 1122, 2212
HphI	GGTGA	3 cut(s)	169, 2167, 2390
Hpy166II	GTNNAC	5 cut(s)	282, 367, 909, 2128, 2209
Hpy188I	TCNGA	8 cut(s)	138, 150, 802, 925, 1056, 1411, 2285, 2741
Hpy8I	GTNNAC	5 cut(s)	282, 367, 909, 2128, 2209
Hpy99I	CGWCG	3 cut(s)	206, 254, 292
HpyAV	CCTTC	7 cut(s)	1150, 1225, 1240, 1447, 2744, 2753, 2821
HpyCH4III	ACNGT	8 cut(s)	535, 692, 782, 1276, 1297, 2025, 2356, 2970
HpyCH4IV	ACGT	6 cut(s)	122, 183, 201, 1105, 2269, 2303
HpyF10VI	GCNNNNNNNGC	6 cut(s)	329, 409, 977, 1345, 1496, 2458
HpySE526I	ACGT	6 cut(s)	122, 183, 201, 1105, 2269, 2303
Hsp92I	GRCGYC	1 cut(s)	201
HspAI	GCGC	5 cut(s)	356, 452, 489, 1598, 2161
Kpn2I	TCCGGA	3 cut(s)	196, 298, 1121
KspAI	GTTAAC	1 cut(s)	367
Lsp1109I	GCAGC	4 cut(s)	234, 544, 1332, 2510
LweI	GCATC	6 cut(s)	229, 343, 544, 2102, 2125, 2535
MaeI	CTAG	3 cut(s)	482, 1766, 2370
MaeII	ACGT	6 cut(s)	122, 183, 201, 1105, 2269, 2303
MaeIII	GTNAC	6 cut(s)	175, 1909, 2016, 2695, 2807, 2909
MflI	RGATCY	5 cut(s)	193, 1118, 1926, 2041, 2741
MhlI	GDGCHC	3 cut(s)	963, 1392, 2454
MlyI	GAGTC	5 cut(s)	47, 136, 1022, 1607, 2533
MmeI	TCCRAC	2 cut(s)	1211, 2557
MroI	TCCGGA	3 cut(s)	196, 298, 1121
MslI	CAYNNNNRTG	1 cut(s)	2928
MspI	CCGG	5 cut(s)	160, 197, 299, 1122, 2212
MspR9I	CCNGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
Mva1269I	GAATGC	4 cut(s)	379, 1197, 2163, 2822
MvaI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
MvnI	CGCG	1 cut(s)	2348
MwoI	GCNNNNNNNGC	6 cut(s)	329, 409, 977, 1345, 1496, 2458
NdeI	CATATG	3 cut(s)	493, 1495, 2942
NheI	GCTAGC	1 cut(s)	481
NmeAIII	GCCGAG	1 cut(s)	2038
NmuCI	GTSAC	4 cut(s)	175, 1909, 2695, 2909
NsbI	TGCGCA	1 cut(s)	1599
NspI	RCATGY	3 cut(s)	407, 975, 1361
PagI	TCATGA	3 cut(s)	2167, 2362, 2614
PasI	CCCWGGG	1 cut(s)	735
PceI	AGGCCT	2 cut(s)	323, 1253
PciI	ACATGT	1 cut(s)	1357
PctI	GAATGC	4 cut(s)	379, 1197, 2163, 2822
PfeI	GAWTC	4 cut(s)	133, 605, 1464, 1559
PflFI	GACNNNGTC	1 cut(s)	1988
PfoI	TCCNGGA	1 cut(s)	83
PinAI	ACCGGT	1 cut(s)	2211
PkrI	GCNGC	6 cut(s)	155, 224, 559, 900, 1347, 2525
PleI	GAGTC	5 cut(s)	46, 136, 1022, 1607, 2533
PmaCI	CACGTG	1 cut(s)	2270
PmlI	CACGTG	1 cut(s)	2270
PpsI	GAGTC	5 cut(s)	46, 136, 1022, 1607, 2533
Ppu21I	YACGTR	1 cut(s)	2270
PscI	ACATGT	1 cut(s)	1357
PshBI	ATTAAT	1 cut(s)	2435
PsiI	TTATAA	2 cut(s)	1869, 2412
Psp124BI	GAGCTC	2 cut(s)	1392, 2454
Psp6I	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2151
PspCI	CACGTG	1 cut(s)	2270
PspEI	GGTNACC	1 cut(s)	175
PspFI	CCCAGC	4 cut(s)	628, 724, 2474, 2624
PspGI	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2151
PspPI	GGNCC	4 cut(s)	1578, 1632, 1689, 2848
PstNI	CAGNNNCTG	2 cut(s)	557, 1345
PsuI	RGATCY	5 cut(s)	193, 1118, 1926, 2041, 2741
PsyI	GACNNNGTC	1 cut(s)	1988
RsaI	GTAC	7 cut(s)	653, 1011, 1420, 2216, 2310, 2403, 2720
RsaNI	GTAC	7 cut(s)	652, 1010, 1419, 2215, 2309, 2402, 2719
RseI	CAYNNNNRTG	1 cut(s)	2928
SacI	GAGCTC	2 cut(s)	1392, 2454
SatI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2524
Sau96I	GGNCC	4 cut(s)	1578, 1632, 1689, 2848
SchI	GAGTC	5 cut(s)	47, 136, 1022, 1607, 2533
ScrFI	CCNGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2153
SduI	GDGCHC	3 cut(s)	963, 1392, 2454
SfaNI	GCATC	6 cut(s)	229, 343, 544, 2102, 2125, 2535
SfcI	CTRYAG	1 cut(s)	440
SinI	GGWCC	1 cut(s)	2848
SmiMI	CAYNNNNRTG	1 cut(s)	2928
SmlI	CTYRAG	1 cut(s)	719
SmoI	CTYRAG	1 cut(s)	719
SseBI	AGGCCT	2 cut(s)	323, 1253
SsiI	CCGC	6 cut(s)	5, 154, 898, 1930, 2030, 2348
SspI	AATATT	4 cut(s)	389, 1261, 1957, 2194
SspMI	CTAG	3 cut(s)	482, 1766, 2370
SstI	GAGCTC	2 cut(s)	1392, 2454
StuI	AGGCCT	2 cut(s)	323, 1253
StyD4I	CCNGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2151
StyI	CCWWGG	1 cut(s)	2745
TaaI	ACNGT	8 cut(s)	535, 692, 782, 1276, 1297, 2025, 2356, 2970
TaiI	ACGT	6 cut(s)	125, 186, 204, 1108, 2272, 2306
TaqI	TCGA	4 cut(s)	72, 101, 1354, 2961
TaqII	GACCGA	1 cut(s)	569
TatI	WGTACW	2 cut(s)	1009, 2308
TauI	GCSGC	2 cut(s)	156, 901
TfiI	GAWTC	4 cut(s)	133, 605, 1464, 1559
TscAI	CASTG	7 cut(s)	1038, 1170, 1549, 2425, 2476, 2494, 2914
TseFI	GTSAC	4 cut(s)	175, 1909, 2695, 2909
TseI	GCWGC	4 cut(s)	222, 557, 1345, 2523
Tsp45I	GTSAC	4 cut(s)	175, 1909, 2695, 2909
TspGWI	ACGGA	5 cut(s)	238, 338, 819, 909, 1519
TspRI	CASTG	7 cut(s)	1038, 1170, 1549, 2425, 2476, 2494, 2914
Tth111I	GACNNNGTC	1 cut(s)	1988
VpaK11BI	GGWCC	1 cut(s)	2848
VspI	ATTAAT	1 cut(s)	2435
XagI	CCTNNNNNAGG	1 cut(s)	2373
XapI	RAATTY	5 cut(s)	127, 305, 434, 773, 2690
XceI	RCATGY	3 cut(s)	407, 975, 1361
XspI	CTAG	3 cut(s)	482, 1766, 2370
ZraI	GACGTC	1 cut(s)	202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.