Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Forward (+)

3405592 .. 3411458

Gene Structure 5867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g05290.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGGCAGCTTCCCAATTCTCTGCAACTCGCAGCGGAGCAGAGACAGCGTGGCATTGCAAATCGCAATCCAAACTGATCGATTTCGGTTCCAGGAAGAACAAATCCAAGCTTTTGTTCACAAGGACATTGAATCGGACTCGGTCGTTTTCGTTCTCGGTGAAGAGCGTTCTGGACAAGCCTCACGAGATCAAGAATCCGATCATCGAACAAGATGCTGCAAGCGAATTCAGCTCATTCACACCTGATGCTGCCTCCATCGCTTCGAGCATCAAATACCACGCAGAATTCACCCCGTTGTTTTCTCCGGAGAAATTTGAGCTTCCAAAGGCCTTCTTTGCAACTGCACAAAGTGTTCGTGATGCGCTCATTGTTAACTGGAATGCAACAAATAATCATTATGAAAAATTGAACGCAAAGCAGGCATACTATTTGTCAATGGAATTTCTACAGGGTAGAGCGCTGTTAAATGCCATTGGTAATTTAGAGCTTGATGGTGCATATGCGGAAGCTTTAAGCAAGCTTGGACACAAATTAGAAAATGTTGCTAACCAGGAGCCGGATGCTGCACTTGGAAACGGAGGTCTTGGTCGGCTTGCCTCTTGCTTCTTGGACTCTTTGGCAACGTTAAATTATCCAGCATGGGGTTATGGGCTTCGGTACAAGTATGGCTTATTTAAGCAGCTGATTACTAAAGATGGTCAAGAAGAAGTTGCTGAGGATTGGCTTGAGATGGGAAATCCCTGGGAGATTGTGAGAAATGACGTCTCCTATCCCGTCAAATTTTATGGCAAGATTGTTACTGGTTCGGATGGAAAACAACATTGGATTGGAGGAGAAGACATAGATGCTGTTGCTTATGATGTTCCAATACCAGGATACAAAACTAAAACCACAATCAACTTGCGGCTTTGGTCAACGAAAGCTTCATCACAGAACTTTGATTTATATGCTTTTAATTCTGGAGATCACACGAAAGCATCTGAAGCTTTAGCAAATGCTGAAAAGATTTGCTACGTACTTTATCCTGGGGATGAATCAATGGAGGGCAAGACACTTCGTTTGAAGCAACAATATACTTTATGTTCTGCTTCTCTCCAAGATATTGTTGCGCGTTTTGAGAGAAGATCTGGAGCAAATGTCAAATGGGAAGAGTTCCCCGAGAAGGTGGCAGTGCAGATGAATGATACTCATCCAACTCTCTGCATTCCTGAACTGATGAGAATTTTGATTGATTTGAAGGGTTTGGACTGGAAGGAGGCCTGGAGTATTACTCAAAGGACGGTTGCATATACAAACCATACTGTTCTACCTGAGGCCTTGGAGAAATGGAGTCTGGAACTTATGGAGAAGCTGCTTCCTCGACATGTTCAGATCATACAGATGATAGATGAGGAGCTCATTCAGACCATAATTTCGGAATATGGCACAGCAGATTATGATTTATTAGAGAAGAAACTTAAGGAGATGAGAATATTAGAAAATGTTGACTTGCCTGCCAAATTTGCGGATTTAATTGTTAAACCCAAAAAGAGTTCCACTGCTGTCTCGAGTGAAGAAATTGAAGAGTCAGAAGAGGAAGATGAATCTGCTGATGCCGAAAAGAGTTCCACTGCTGTCCTGAGTGAAGAAATTGAAGAGTCAGAAGAGGAAGATGAATCTGCTGATGCCGAAAAGAGTTCCACTGCTGTCCTGAGTGAAGAAATTGAAGAGTCAGAAGAGAAAGATGAATCTGCTGATGCTGAAAGGAGTTCCACTGCTGTCCTGAGTGAAGAAATTGAAGAGTCAGAAGAGGAAGATGAATCTGCTGATGAAGAAAAAGTACCTGTGAAGAAACGCAAAGAGGAAAAAAAGAAAAAGGTTGTTGTGGAACCACCGAAGTTAGTACGTATGGCAAATCTCTGTGTTGTGGGTGGTCACGCAGTAAATGGCGTTGCTGAAATACACAGTGAAATAGTGAAAGATGAAGTATTTAATTCATTTTATAAGGTGAAGCGCATTCATGAATACAAGCGACAACTGATGAATATTATGGGAATTGTTTACCGCTACAAGAAAATGAAAGAAATGAGTGCTTCAGGAAGGAAATCAAAGTTTGTTCCACGTGTTTGTATGTTTGGAGGGAAAGCATTTTCTACGTATGTGCAAGCCAAGAGAATTGTGAAATTTATCACAGATGTAGGGGCAACCATTAATCATGATCCTAGTATCGGTGATCTACTGAAGGTTGTCTTCGTCCCCGATTACAATGTCAGTGTTGCTGAACAGTTAATTCCTGCAAGTGAGCTCTCACAGCACATCAGTACCGCGGGTATGGAAGCCAGTGGAACCAGCAACATGAAGTTTGCAATGAATGGCTGCATCCTCATTGGGACTCTAGACGGTGCCAATGTTGAGATAAGAGAAGAGGTTGGGGAAGACAACTTTTTCCTCTTTGGTGCTAAAGCTCACGAGATTGCTGGGCTGAGAAAAGAACGAGCTGAGGGAAAGTTTGTTCCGGACCCACGTTTTGAAGAAGTCAAGGAATTTGTCAAAAGCGGTGTTTTTGGGTCGTACAGTTATGACGAACTGATTGGATCCCTGGAAGGAAATGAAGGATTTGGCCAGGCAGATTATTTCCTTGTGGGCAAGGACTTCCCCAGTTACATAGAATGTCAAGAGAAGGTCGATGAAGCATATCGAGACCAAAAGCAGAGATGGACAAGAATGTCGATCCTGAACACAGCAGGCTCGTACAAGTTTAGCAGTGACAGGACCATTCACGAATATGCTAAGGACATATGGAACATCAACCCCGTCGAGCTGCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009414 GO:0009415 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009987 GO:0010035 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

936

Amino Acids

105.09

Weight (kDa)

5.04

Isoelectric Point (pI)

46.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1983
AasI	GACNNNNNNGTC	1 cut(s)	2704
AatII	GACGTC	1 cut(s)	765
AccB1I	GGYRCC	1 cut(s)	2381
AccII	CGCG	2 cut(s)	1111, 2306
AccIII	TCCGGA	2 cut(s)	304, 2494
AciI	CCGC	8 cut(s)	33, 503, 904, 1505, 2044, 2304, 2306, 2535
AclI	AACGTT	1 cut(s)	623
AclWI	GGATC	4 cut(s)	2192, 2568, 2581, 2704
AcoI	YGGCCR	1 cut(s)	2599
AcsI	RAATTY	9 cut(s)	224, 284, 311, 440, 779, 1221, 1499, 2162, 2522
AcuI	CTGAAG	3 cut(s)	1002, 2058, 2240
AcvI	CACGTG	1 cut(s)	2102
AcyI	GRCGYC	1 cut(s)	762
AdeI	CACNNNGTG	1 cut(s)	350
AfaI	GTAC	7 cut(s)	659, 1017, 1821, 1884, 2302, 2552, 2732
AfeI	AGCGCT	1 cut(s)	459
AfiI	CCNNNNNNNGG	5 cut(s)	556, 641, 872, 1162, 2207
AflII	CTTAAG	1 cut(s)	1457
AflIII	ACRYGT	2 cut(s)	1363, 2101
AgsI	TTSAA	9 cut(s)	130, 409, 1063, 1237, 1562, 1634, 1706, 1778, 2510
AjnI	CCWGG	8 cut(s)	89, 549, 740, 871, 1024, 1259, 2577, 2601
AjuI	GAANNNNNNNTTGG	4 cut(s)	98, 130, 805, 837
AloI	GAACNNNNNNTCC	2 cut(s)	2475, 2507
Alw21I	GWGCWC	2 cut(s)	1398, 2286
Alw26I	GTCTC	4 cut(s)	35, 769, 1549, 2673
AlwI	GGATC	4 cut(s)	2192, 2568, 2581, 2704
Ama87I	CYCGRG	2 cut(s)	1157, 1546
Aor13HI	TCCGGA	2 cut(s)	304, 2494
Aor51HI	AGCGCT	1 cut(s)	459
AoxI	GGCC	4 cut(s)	327, 1257, 1314, 2599
ApeKI	GCWGC	9 cut(s)	5, 30, 215, 248, 563, 679, 1351, 2355, 2800
ApoI	RAATTY	9 cut(s)	224, 284, 311, 440, 779, 1221, 1499, 2162, 2522
ArsI	GACNNNNNNTTYG	6 cut(s)	1042, 1074, 1396, 1428, 2489, 2521
AseI	ATTAAT	1 cut(s)	2190
AspLEI	GCGC	4 cut(s)	364, 460, 1111, 1995
AspS9I	GGNCC	2 cut(s)	2497, 2751
AsuHPI	GGTGA	4 cut(s)	169, 280, 1999, 2222
AvaI	CYCGRG	2 cut(s)	1157, 1546
AvaII	GGWCC	2 cut(s)	2497, 2751
AxyI	CCTNAGG	1 cut(s)	1311
BaeI	ACNNNNGTAYC	2 cut(s)	2284, 2317
BalI	TGGCCA	1 cut(s)	2601
BamHI	GGATCC	1 cut(s)	2573
BanI	GGYRCC	1 cut(s)	2381
BanII	GRGCYC	2 cut(s)	1398, 2286
BarI	GAAGNNNNNNTAC	2 cut(s)	1803, 1835
BauI	CACGAG	2 cut(s)	182, 2447
BbrPI	CACGTG	1 cut(s)	2102
BbsI	GAAGAC	3 cut(s)	843, 2221, 2421
Bbv12I	GWGCWC	2 cut(s)	1398, 2286
BbvCI	CCTCAGC	2 cut(s)	714, 2478
BbvI	GCAGC	9 cut(s)	17, 42, 202, 235, 550, 691, 1338, 2342, 2787
BccI	CCATC	6 cut(s)	263, 485, 689, 724, 803, 2688
BcgI	CGANNNNNNTGC	2 cut(s)	194, 228
BciT130I	CCWGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
BciVI	GTATCC	1 cut(s)	869
BcoDI	GTCTC	4 cut(s)	35, 769, 1549, 2673
BfaI	CTAG	2 cut(s)	2202, 2375
BfmI	CTRYAG	1 cut(s)	446
BfoI	RGCGCY	1 cut(s)	461
BfrI	CTTAAG	1 cut(s)	1457
BfuI	GTATCC	1 cut(s)	869
BglII	AGATCT	1 cut(s)	1124
Bme1390I	CCNGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
Bme18I	GGWCC	2 cut(s)	2497, 2751
BmeT110I	CYCGRG	2 cut(s)	1157, 1546
BmgT120I	GGNCC	2 cut(s)	2497, 2751
BmiI	GGNNCC	7 cut(s)	88, 555, 1869, 2326, 2383, 2499, 2575
BmrFI	CCNGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
BmrI	ACTGGG	1 cut(s)	2631
BmuI	ACTGGG	1 cut(s)	2631
BpiI	GAAGAC	3 cut(s)	843, 2221, 2421
BplI	GAGNNNNNCTC	2 cut(s)	1255, 1287
BpmI	CTGGAG	3 cut(s)	981, 1149, 1282
Bpu10I	CCTNAGC	3 cut(s)	714, 2478, 2769
BpuEI	CTTGAG	1 cut(s)	746
Bsa29I	ATCGAT	1 cut(s)	78
BsaAI	YACGTR	4 cut(s)	1015, 1886, 2102, 2136
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaHI	GRCGYC	1 cut(s)	762
BsaI	GGTCTC	1 cut(s)	2673
BsaJI	CCNNGG	6 cut(s)	740, 741, 1025, 1317, 2304, 2577
BsaWI	WCCGGW	2 cut(s)	304, 2494
BsaXI	ACNNNNNCTCC	2 cut(s)	1122, 1152
Bsc4I	CCNNNNNNNGG	5 cut(s)	556, 641, 872, 1162, 2207
Bse1I	ACTGG	5 cut(s)	380, 805, 1253, 2319, 2637
Bse21I	CCTNAGG	1 cut(s)	1311
Bse3DI	GCAATG	2 cut(s)	52, 2352
Bse8I	GATNNNNATC	1 cut(s)	1188
BseAI	TCCGGA	2 cut(s)	304, 2494
BseBI	CCWGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
BseCI	ATCGAT	1 cut(s)	78
BseDI	CCNNGG	6 cut(s)	740, 741, 1025, 1317, 2304, 2577
BseGI	GGATG	5 cut(s)	565, 814, 1036, 1189, 2358
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	5 cut(s)	556, 641, 872, 1162, 2207
BseMI	GCAATG	2 cut(s)	52, 2352
BseMII	CTCAG	7 cut(s)	705, 1302, 1610, 1682, 1754, 2453, 2469
BseNI	ACTGG	5 cut(s)	380, 805, 1253, 2319, 2637
BseRI	GAGGAG	2 cut(s)	846, 1406
BseXI	GCAGC	9 cut(s)	17, 42, 202, 235, 550, 691, 1338, 2342, 2787
BseYI	CCCAGC	1 cut(s)	2456
BsgI	GTGCAG	3 cut(s)	327, 549, 1193
Bsh1236I	CGCG	2 cut(s)	1111, 2306
Bsh1285I	CGRYCG	1 cut(s)	143
BshFI	GGCC	4 cut(s)	329, 1259, 1316, 2601
BshNI	GGYRCC	1 cut(s)	2381
BshVI	ATCGAT	1 cut(s)	78
BsiEI	CGRYCG	1 cut(s)	143
BsiHKAI	GWGCWC	2 cut(s)	1398, 2286
BsiHKCI	CYCGRG	2 cut(s)	1157, 1546
BsiSI	CCGG	3 cut(s)	305, 557, 2495
BslFI	GGGAC	2 cut(s)	2219, 2383
BslI	CCNNNNNNNGG	5 cut(s)	556, 641, 872, 1162, 2207
BsmAI	GTCTC	4 cut(s)	35, 769, 1549, 2673
BsmBI	CGTCTC	1 cut(s)	769
BsmFI	GGGAC	2 cut(s)	2219, 2383
BsmI	GAATGC	3 cut(s)	385, 1203, 1995
BsnI	GGCC	4 cut(s)	329, 1259, 1316, 2601
Bso31I	GGTCTC	1 cut(s)	2673
BsoBI	CYCGRG	2 cut(s)	1157, 1546
Bsp1286I	GDGCHC	2 cut(s)	1398, 2286
Bsp13I	TCCGGA	2 cut(s)	304, 2494
BspACI	CCGC	8 cut(s)	33, 503, 904, 1505, 2044, 2304, 2306, 2535
BspANI	GGCC	4 cut(s)	329, 1259, 1316, 2601
BspCNI	CTCAG	7 cut(s)	706, 1303, 1611, 1683, 1755, 2454, 2470
BspDI	ATCGAT	1 cut(s)	78
BspEI	TCCGGA	2 cut(s)	304, 2494
BspFNI	CGCG	2 cut(s)	1111, 2306
BspHI	TCATGA	2 cut(s)	1999, 2194
BspLI	GGNNCC	7 cut(s)	88, 555, 1869, 2326, 2383, 2499, 2575
BspPI	GGATC	4 cut(s)	2192, 2568, 2581, 2704
BspQI	GCTCTTC	1 cut(s)	155
BspT107I	GGYRCC	1 cut(s)	2381
BspTI	CTTAAG	1 cut(s)	1457
BspTNI	GGTCTC	1 cut(s)	2673
BsrDI	GCAATG	2 cut(s)	52, 2352
BsrI	ACTGG	5 cut(s)	380, 805, 1253, 2319, 2637
BssECI	CCNNGG	6 cut(s)	740, 741, 1025, 1317, 2304, 2577
BssNI	GRCGYC	1 cut(s)	762
BssSI	CACGAG	2 cut(s)	182, 2447
BssT1I	CCWWGG	1 cut(s)	1317
Bst2BI	CACGAG	2 cut(s)	182, 2447
Bst2UI	CCWGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
Bst4CI	ACNGT	6 cut(s)	1282, 1303, 1946, 2265, 2381, 2555
BstACI	GRCGYC	1 cut(s)	762
BstAFI	CTTAAG	1 cut(s)	1457
BstBAI	YACGTR	4 cut(s)	1015, 1886, 2102, 2136
BstC8I	GCNNGC	7 cut(s)	220, 420, 518, 594, 1494, 2145, 2725
BstDEI	CTNAG	9 cut(s)	714, 1311, 1619, 1691, 1763, 2462, 2478, 2769, 2805
BstDSI	CCRYGG	1 cut(s)	2304
BstF5I	GGATG	5 cut(s)	565, 814, 1036, 1189, 2358
BstFNI	CGCG	2 cut(s)	1111, 2306
BstH2I	RGCGCY	1 cut(s)	461
BstHHI	GCGC	4 cut(s)	364, 460, 1111, 1995
BstMAI	GTCTC	4 cut(s)	35, 769, 1549, 2673
BstMCI	CGRYCG	1 cut(s)	143
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 228, 257, 335, 419, 983, 1502, 2290
BstNI	CCWGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
BstNSI	RCATGY	1 cut(s)	1367
BstSCI	CCNGG	8 cut(s)	89, 549, 740, 871, 1024, 1259, 2577, 2601
BstSFI	CTRYAG	1 cut(s)	446
BstSNI	TACGTA	3 cut(s)	1015, 1886, 2136
BstUI	CGCG	2 cut(s)	1111, 2306
BstV1I	GCAGC	9 cut(s)	17, 42, 202, 235, 550, 691, 1338, 2342, 2787
BstV2I	GAAGAC	3 cut(s)	843, 2221, 2421
BstX2I	RGATCY	2 cut(s)	1124, 2573
BstYI	RGATCY	2 cut(s)	1124, 2573
Bsu15I	ATCGAT	1 cut(s)	78
Bsu36I	CCTNAGG	1 cut(s)	1311
BsuI	GTATCC	1 cut(s)	869
BsuRI	GGCC	4 cut(s)	329, 1259, 1316, 2601
BsuTUI	ATCGAT	1 cut(s)	78
BtgI	CCRYGG	1 cut(s)	2304
BtgZI	GCGATG	1 cut(s)	241
BtsCI	GGATG	5 cut(s)	565, 814, 1036, 1189, 2358
BtsI	GCAGTG	6 cut(s)	1176, 1536, 1608, 1680, 1752, 2749
BtsIMutI	CAGTG	9 cut(s)	1176, 1536, 1608, 1680, 1752, 1951, 2257, 2326, 2749
Cac8I	GCNNGC	7 cut(s)	220, 420, 518, 594, 1494, 2145, 2725
CciI	TCATGA	2 cut(s)	1999, 2194
CfoI	GCGC	4 cut(s)	364, 460, 1111, 1995
Cfr13I	GGNCC	2 cut(s)	2497, 2751
Cfr42I	CCGCGG	1 cut(s)	2307
ClaI	ATCGAT	1 cut(s)	78
Csp6I	GTAC	7 cut(s)	658, 1016, 1820, 1883, 2301, 2551, 2731
CviAII	CATG	5 cut(s)	639, 1364, 2000, 2195, 2335
CviQI	GTAC	7 cut(s)	658, 1016, 1820, 1883, 2301, 2551, 2731
DdeI	CTNAG	9 cut(s)	714, 1311, 1619, 1691, 1763, 2462, 2478, 2769, 2805
DraIII	CACNNNGTG	1 cut(s)	350
DrdI	GACNNNNNNGTC	1 cut(s)	2704
DseDI	GACNNNNNNGTC	1 cut(s)	2704
EaeI	YGGCCR	1 cut(s)	2599
Ecl136II	GAGCTC	2 cut(s)	1396, 2284
Eco105I	TACGTA	3 cut(s)	1015, 1886, 2136
Eco130I	CCWWGG	1 cut(s)	1317
Eco147I	AGGCCT	3 cut(s)	329, 1259, 1316
Eco24I	GRGCYC	2 cut(s)	1398, 2286
Eco31I	GGTCTC	1 cut(s)	2673
Eco47I	GGWCC	2 cut(s)	2497, 2751
Eco47III	AGCGCT	1 cut(s)	459
Eco53kI	GAGCTC	2 cut(s)	1396, 2284
Eco57I	CTGAAG	3 cut(s)	1002, 2058, 2240
Eco72I	CACGTG	1 cut(s)	2102
Eco81I	CCTNAGG	1 cut(s)	1311
Eco88I	CYCGRG	2 cut(s)	1157, 1546
EcoICRI	GAGCTC	2 cut(s)	1396, 2284
EcoRI	GAATTC	2 cut(s)	224, 284
EcoRII	CCWGG	8 cut(s)	89, 549, 740, 871, 1024, 1259, 2577, 2601
EcoT14I	CCWWGG	1 cut(s)	1317
EcoT38I	GRGCYC	2 cut(s)	1398, 2286
ErhI	CCWWGG	1 cut(s)	1317
Esp3I	CGTCTC	1 cut(s)	769
FaeI	CATG	5 cut(s)	642, 1367, 2003, 2198, 2338
FalI	AAGNNNNNCTT	6 cut(s)	317, 349, 653, 685, 2213, 2245
FaqI	GGGAC	2 cut(s)	2219, 2383
FatI	CATG	5 cut(s)	638, 1363, 1999, 2194, 2334
FauI	CCCGC	1 cut(s)	2299
FauNDI	CATATG	2 cut(s)	499, 2777
FokI	GGATG	5 cut(s)	572, 821, 1043, 1176, 2345
FriOI	GRGCYC	2 cut(s)	1398, 2286
FspBI	CTAG	2 cut(s)	2202, 2375
GlaI	GCGC	4 cut(s)	363, 459, 1110, 1994
GsaI	CCCAGC	1 cut(s)	2460
GsuI	CTGGAG	3 cut(s)	981, 1149, 1282
HaeII	RGCGCY	1 cut(s)	461
HaeIII	GGCC	4 cut(s)	329, 1259, 1316, 2601
HapII	CCGG	3 cut(s)	305, 557, 2495
HhaI	GCGC	4 cut(s)	364, 460, 1111, 1995
Hin1I	GRCGYC	1 cut(s)	762
Hin1II	CATG	5 cut(s)	642, 1367, 2003, 2198, 2338
Hin6I	GCGC	4 cut(s)	362, 458, 1109, 1993
HinP1I	GCGC	4 cut(s)	362, 458, 1109, 1993
HincII	GTYRAC	3 cut(s)	373, 915, 1486
HindII	GTYRAC	3 cut(s)	373, 915, 1486
HindIII	AAGCTT	5 cut(s)	107, 507, 518, 921, 984
HpaI	GTTAAC	1 cut(s)	373
HpaII	CCGG	3 cut(s)	305, 557, 2495
HphI	GGTGA	4 cut(s)	169, 280, 1999, 2222
Hpy166II	GTNNAC	5 cut(s)	117, 373, 915, 1486, 2041
Hpy8I	GTNNAC	5 cut(s)	117, 373, 915, 1486, 2041
Hpy99I	CGWCG	1 cut(s)	2798
HpyAV	CCTTC	9 cut(s)	340, 1156, 1231, 1246, 2073, 2215, 2576, 2585, 2653
HpyCH4III	ACNGT	6 cut(s)	1282, 1303, 1946, 2265, 2381, 2555
HpyCH4IV	ACGT	7 cut(s)	623, 762, 1014, 1885, 2101, 2135, 2503
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 228, 257, 335, 419, 983, 1502, 2290
HpyF3I	CTNAG	9 cut(s)	714, 1311, 1619, 1691, 1763, 2462, 2478, 2769, 2805
HpySE526I	ACGT	7 cut(s)	623, 762, 1014, 1885, 2101, 2135, 2503
Hsp92I	GRCGYC	1 cut(s)	762
Hsp92II	CATG	5 cut(s)	642, 1367, 2003, 2198, 2338
HspAI	GCGC	4 cut(s)	362, 458, 1109, 1993
Kpn2I	TCCGGA	2 cut(s)	304, 2494
KspAI	GTTAAC	1 cut(s)	373
KspI	CCGCGG	1 cut(s)	2307
LguI	GCTCTTC	1 cut(s)	155
LmnI	GCTCC	4 cut(s)	35, 553, 1130, 1393
Lsp1109I	GCAGC	9 cut(s)	17, 42, 202, 235, 550, 691, 1338, 2342, 2787
MaeI	CTAG	2 cut(s)	2202, 2375
MaeII	ACGT	7 cut(s)	623, 762, 1014, 1885, 2101, 2135, 2503
MaeIII	GTNAC	4 cut(s)	796, 1913, 2639, 2744
MflI	RGATCY	2 cut(s)	1124, 2573
MhlI	GDGCHC	2 cut(s)	1398, 2286
MlsI	TGGCCA	1 cut(s)	2601
MluNI	TGGCCA	1 cut(s)	2601
MlyI	GAGTC	8 cut(s)	130, 605, 1339, 1574, 1646, 1718, 1790, 2365
MmeI	TCCRAC	1 cut(s)	1217
Mox20I	TGGCCA	1 cut(s)	2601
MroI	TCCGGA	2 cut(s)	304, 2494
MscI	TGGCCA	1 cut(s)	2601
MslI	CAYNNNNRTG	2 cut(s)	1379, 2763
Msp20I	TGGCCA	1 cut(s)	2601
MspA1I	CMGCKG	3 cut(s)	33, 682, 2306
MspCI	CTTAAG	1 cut(s)	1457
MspI	CCGG	3 cut(s)	305, 557, 2495
MspR9I	CCNGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
Mva1269I	GAATGC	3 cut(s)	385, 1203, 1995
MvaI	CCWGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
MvnI	CGCG	2 cut(s)	1111, 2306
MwoI	GCNNNNNNNGC	8 cut(s)	44, 228, 257, 335, 419, 983, 1502, 2290
NdeI	CATATG	2 cut(s)	499, 2777
NlaIII	CATG	5 cut(s)	642, 1367, 2003, 2198, 2338
NlaIV	GGNNCC	7 cut(s)	88, 555, 1869, 2326, 2383, 2499, 2575
NmuCI	GTSAC	2 cut(s)	1913, 2744
NspI	RCATGY	1 cut(s)	1367
PaeR7I	CTCGAG	1 cut(s)	1546
PagI	TCATGA	2 cut(s)	1999, 2194
PasI	CCCWGGG	1 cut(s)	741
PceI	AGGCCT	3 cut(s)	329, 1259, 1316
PciI	ACATGT	1 cut(s)	1363
PciSI	GCTCTTC	1 cut(s)	155
PctI	GAATGC	3 cut(s)	385, 1203, 1995
PfeI	GAWTC	7 cut(s)	130, 193, 1034, 1583, 1655, 1727, 1799
PflFI	GACNNNGTC	1 cut(s)	139
PfoI	TCCNGGA	1 cut(s)	89
PleI	GAGTC	8 cut(s)	130, 605, 1338, 1573, 1645, 1717, 1789, 2365
PmaCI	CACGTG	1 cut(s)	2102
PmlI	CACGTG	1 cut(s)	2102
PpsI	GAGTC	8 cut(s)	130, 605, 1338, 1573, 1645, 1717, 1789, 2365
Ppu21I	YACGTR	4 cut(s)	1015, 1886, 2102, 2136
PscI	ACATGT	1 cut(s)	1363
PshBI	ATTAAT	1 cut(s)	2190
PsiI	TTATAA	1 cut(s)	1983
Psp124BI	GAGCTC	2 cut(s)	1398, 2286
Psp1406I	AACGTT	1 cut(s)	623
Psp6I	CCWGG	8 cut(s)	89, 549, 740, 871, 1024, 1259, 2577, 2601
PspCI	CACGTG	1 cut(s)	2102
PspFI	CCCAGC	1 cut(s)	2456
PspGI	CCWGG	8 cut(s)	89, 549, 740, 871, 1024, 1259, 2577, 2601
PspN4I	GGNNCC	7 cut(s)	88, 555, 1869, 2326, 2383, 2499, 2575
PspPI	GGNCC	2 cut(s)	2497, 2751
PsuI	RGATCY	2 cut(s)	1124, 2573
PsyI	GACNNNGTC	1 cut(s)	139
PvuII	CAGCTG	1 cut(s)	682
RsaI	GTAC	7 cut(s)	659, 1017, 1821, 1884, 2302, 2552, 2732
RsaNI	GTAC	7 cut(s)	658, 1016, 1820, 1883, 2301, 2551, 2731
RseI	CAYNNNNRTG	2 cut(s)	1379, 2763
SacI	GAGCTC	2 cut(s)	1398, 2286
SacII	CCGCGG	1 cut(s)	2307
SapI	GCTCTTC	1 cut(s)	155
Sau96I	GGNCC	2 cut(s)	2497, 2751
SchI	GAGTC	8 cut(s)	130, 605, 1339, 1574, 1646, 1718, 1790, 2365
ScrFI	CCNGG	8 cut(s)	91, 551, 742, 873, 1026, 1261, 2579, 2603
SduI	GDGCHC	2 cut(s)	1398, 2286
SfcI	CTRYAG	1 cut(s)	446
Sfr274I	CTCGAG	1 cut(s)	1546
Sfr303I	CCGCGG	1 cut(s)	2307
SgrBI	CCGCGG	1 cut(s)	2307
SinI	GGWCC	2 cut(s)	2497, 2751
SlaI	CTCGAG	1 cut(s)	1546
SmiMI	CAYNNNNRTG	2 cut(s)	1379, 2763
SmlI	CTYRAG	3 cut(s)	725, 1457, 1546
SmoI	CTYRAG	3 cut(s)	725, 1457, 1546
SnaBI	TACGTA	3 cut(s)	1015, 1886, 2136
SseBI	AGGCCT	3 cut(s)	329, 1259, 1316
SsiI	CCGC	8 cut(s)	33, 503, 904, 1505, 2044, 2304, 2306, 2535
SspI	AATATT	2 cut(s)	1473, 2026
SspMI	CTAG	2 cut(s)	2202, 2375
SstI	GAGCTC	2 cut(s)	1398, 2286
StuI	AGGCCT	3 cut(s)	329, 1259, 1316
StyD4I	CCNGG	8 cut(s)	89, 549, 740, 871, 1024, 1259, 2577, 2601
StyI	CCWWGG	1 cut(s)	1317
TaaI	ACNGT	6 cut(s)	1282, 1303, 1946, 2265, 2381, 2555
TaiI	ACGT	7 cut(s)	626, 765, 1017, 1888, 2104, 2138, 2506
TaqI	TCGA	9 cut(s)	78, 204, 263, 1360, 1547, 2664, 2677, 2708, 2796
TaqII	GACCGA	1 cut(s)	129
TauI	GCSGC	1 cut(s)	907
TfiI	GAWTC	7 cut(s)	130, 193, 1034, 1583, 1655, 1727, 1799
TscAI	CASTG	9 cut(s)	1176, 1543, 1615, 1687, 1759, 1951, 2257, 2326, 2749
TseFI	GTSAC	2 cut(s)	1913, 2744
TseI	GCWGC	9 cut(s)	5, 30, 215, 248, 563, 679, 1351, 2355, 2800
Tsp45I	GTSAC	2 cut(s)	1913, 2744
TspGWI	ACGGA	1 cut(s)	591
TspRI	CASTG	9 cut(s)	1176, 1543, 1615, 1687, 1759, 1951, 2257, 2326, 2749
Tth111I	GACNNNGTC	1 cut(s)	139
Vha464I	CTTAAG	1 cut(s)	1457
VpaK11BI	GGWCC	2 cut(s)	2497, 2751
VspI	ATTAAT	1 cut(s)	2190
XapI	RAATTY	9 cut(s)	224, 284, 311, 440, 779, 1221, 1499, 2162, 2522
XbaI	TCTAGA	1 cut(s)	2374
XceI	RCATGY	1 cut(s)	1367
XhoI	CTCGAG	1 cut(s)	1546
XspI	CTAG	2 cut(s)	2202, 2375
ZraI	GACGTC	1 cut(s)	763

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.