Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00270

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Reverse (-)

45173 .. 50550

Gene Structure 5378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G007140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGGCGGCTATCCCATTCTCAGCTACATCCAAACCATCAAAGTCAGCTACTCATTCCACGTTCATCTCGAGCTTCATAGCAGGCTCCAACCACATAGGAAGACATTCAAGGCTGTTCTTGATCTCAACCTCTGGTTCTGTTTCTGGCCGAGCTAGGAGAAAGCTCTGTGTGAAGAATGTGGCTGCTACTGATCAAAAGAAAGAACCTAAAGACGTTGCCACCCGAGAAGATTCTGCATCCATTTCATCGATTATCAAATACCACGCGGAATTCACACCTTGCTTCTCTATGGTATCGTTTGGACTTCCCAAGGCATTCTATGCCACCGCGGAGAGTGTTCGTGATATGCTTATCATTAACTGGAACACTACATATGAGTACTGTGAGAAGTTGAATGTAAAGCAGGCATATTATCTCTCAATGGAGTATCTACAGGGTAGAGCATTGCTAAATGCAATTGGCAACTTGGAGCTTTCAGGGCCTTATGCAGAGGCTTTGGAAAAGCTTGGGCACAGTCTTGAGGATGTAGCTAGGCAGGAACCAGATGCTGCTCTTGGAAATGGGGGGCTAGGGAGGCTTGCTTCCTGCTTTTTGGACTCCCTGGCGACCCAAAATTACCCGGCATGGGGATATGGACTAAGATACAAGTATGGATTGTTTAAGCAACACATTACAAAAGATGGCCAGGAGGAAGTTGCTGAAAATTGGCTTGAGATGGGCAATCCATGGGAAATTCCAAGAAATGATGTGACCTATCCTGTGAAATTCTATGGTGAAGTTATTTCAGGGCCAGATGGGAAAAAACAATGGGTTGGAGGAGACAATGTCACCGCCGTTGCCTATGATGTCCCCATACCAGGATATAAAACTAAAACCACCATAAACCTTCGACTGTGGTCCACAAAGGCTGCACCAGCAGAATTTGATTTGCATGCTTTCAACACTGGAGATCATGCCAAGGCATATGCAGCTATAAAGAATGCTGAAAAGATCTGTTACATATTGTACCCCGGGGATGAAACCATGGAGGGAAAATCACTTAGATTGAAGCAACAATATACACTATGTTCTGCTTCTCTCCAAGACATAATCGCACGTTTTGAAAGGAGATCAGGGGACCCAGTGAATTGGGAAAAATTTCCTGAAAAAGTTGCAGTGCAGATGAATGATACTCATCCAACTCTCTGCATTCCAGAGTTGATAAGAATATTGGTGGATGTGAAGGGATTGAGCTGGAAGGAAGCCTGGAATGTTACTCGAAGAACTGTTGCATACACAAACCATACAGTTCTACCCGAGGCATTGGAGAAATGGAGTTTAAATCTTATACAGGAGTTGTTGCCAAGACATGTTGAGATCATAAAAATGATTGATGAGGAGCTAATTCATACTATTGTTGCTGAGTATGGCACGGAGGATCTTGACTTGTTGCTACAAAAAGTGAAAGAAATGAGAATTCTAGATAACATTGAGTTGCCTGACTCTGTCTTGGAAATGCTCCTTAAATCAGAAGAAAGCTCCATGGTTGATCAAATTGAGTCGGTTTCTGATAACGAAACTAAAGGCACTGACAAAGGAGACCAATCTCAAGTACTAGACACTGAGAAGAAAAATGAGGTTACATTTGAACCAGATCCTAAGCTGCCAAAGATGGTGCACATGGCTAATCTATGTATTGCTGGTGGACATGCAGTAAATGGAGTTGCTCAGATTCATAGTGAAATAGTGAAGAACGAAGTATTTAACGATTTCTATAAGTTGTGGCCTGAGAAATTTCAAAATAAGACCAATGGGGTAACACCTCGAAGATGGATTCGTTTCTGCAATCCAGATCTAAGTAGACTTATAACCAAGTGTATTGGAACAGAAGAGTGGGTAAAAAATACTGAGATGTTGGTGAACCTTCAAAAGTTTGCTGATAATGAAGATTTCCAGTCTGAATGGAGGGAAGTAAAAATGAGAAACAAGATTAAGGTTGCATCATTCCTCAAGGAAAAAACTGGTTATCTAGTCAACCCCAATGCGATGTTTGATGTACAGGTGAAGCGCATCCATGAATATAAACGGCAGCTAATGAATATCATGGGAATTATTTATCGATACAAGAAAATGAAGGAAATGAGTCCCAATGAAAGAGAATCAAGGTTTGTTCCAAGGGTGTGTATATTTGGAGGGAAGGCATTCGCGACATATGTTCAAGCCAAAAGGATTGTGAAATTCATCACTGATGTTGGAGCCATTGTAAACCGCGATCAAGAGATAGGTGATCTTTTGAAGGTTGTGTTTGTTCCTGATTACAATGTGAGTGTTGCAGAAGTGCTTATTCCTGGTAGTGAACTGTCCCAGCATATCAGTACTGCTGGAATGGAGGCCAGTGGAACTAGCAATATGAAGTTTGCAATGAACGGGTGTATACAAATTGGAACTCTAGATGGGGCTAATGTTGAAATAAGGGAAGAGGTTGGAGAGGAAAACTTTTTCCTCTTTGGTGCTAGAGCTGAAGAAATATCTGGACTAAGGAAACAAAGATCTGAAGGAAAGTTCGTGGCGGATCCACGGTTTGAAGAAGTGAAGGCATATGTGAGGAGTGGTGTTTTCGGTCCTTACAACTATGATGAACTGATGGGATCTCTGGAAGGAAATGAAGGTTACGGTCGCGCTGATTATTTTCTTGTTGGATACGACTTCCCTAGTTATATAGAATGCCAAGGCAAGGTCGATGAAGCATATCGAGATCAAAAGAGATGGACAAAGATGTCGATTTTGAACACAGCTGGTTCATACAAATTCAGCAGTGACCGTACAATTCATGAATATGCAAGAGACATATGGAGGATCGAACCTGTAGTACTGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009501 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

952

Amino Acids

107.86

Weight (kDa)

6.09

Isoelectric Point (pI)

40.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	166 - 488	1.4e-127	Carbohydrate phosphorylase
Phosphorylase	PF00343	547 - 946	1.5e-165	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1847
AasI	GACNNNNNNGTC	1 cut(s)	2755
AccI	GTMKAC	2 cut(s)	1840, 2413
AccII	CGCG	5 cut(s)	266, 329, 2186, 2250, 2658
AciI	CCGC	7 cut(s)	5, 266, 327, 329, 831, 2248, 2549
AclWI	GGATC	6 cut(s)	1425, 1628, 2546, 2559, 2635, 2843
AcoI	YGGCCR	2 cut(s)	145, 682
AcsI	RAATTY	9 cut(s)	269, 732, 764, 920, 1136, 1455, 1772, 2216, 2786
AcuI	CTGAAG	2 cut(s)	2520, 2553
AfaI	GTAC	7 cut(s)	380, 1007, 1593, 2037, 2356, 2803, 2850
AfiI	CCNNNNNNNGG	4 cut(s)	625, 626, 857, 2713
AflIII	ACRYGT	1 cut(s)	1348
AjnI	CCWGG	5 cut(s)	600, 684, 856, 1244, 2326
Alw21I	GWGCWC	1 cut(s)	1659
Alw26I	GTCTC	3 cut(s)	813, 1572, 2817
Alw44I	GTGCAC	1 cut(s)	1655
AlwI	GGATC	6 cut(s)	1425, 1628, 2546, 2559, 2635, 2843
AlwNI	CAGNNNCTG	1 cut(s)	548
Ama87I	CYCGRG	4 cut(s)	67, 222, 1010, 1295
AoxI	GGCC	6 cut(s)	145, 479, 682, 788, 1763, 2370
ApaLI	GTGCAC	1 cut(s)	1655
ApeKI	GCWGC	6 cut(s)	182, 548, 908, 968, 1642, 2068
ApoI	RAATTY	9 cut(s)	269, 732, 764, 920, 1136, 1455, 1772, 2216, 2786
Asp700I	GAANNNNTTC	3 cut(s)	103, 1137, 2180
AspLEI	GCGC	2 cut(s)	2049, 2660
AspS9I	GGNCC	5 cut(s)	479, 788, 897, 1117, 2600
AsuC2I	CCSGG	3 cut(s)	620, 1011, 1012
AsuHPI	GGTGA	5 cut(s)	785, 820, 1909, 2053, 2276
AvaI	CYCGRG	4 cut(s)	67, 222, 1010, 1295
AvaII	GGWCC	3 cut(s)	897, 1117, 2600
BaeGI	GKGCMC	2 cut(s)	513, 1659
BalI	TGGCCA	1 cut(s)	684
BamHI	GGATCC	1 cut(s)	2551
BbsI	GAAGAC	1 cut(s)	106
Bbv12I	GWGCWC	1 cut(s)	1659
BbvI	GCAGC	6 cut(s)	169, 535, 895, 980, 1629, 2080
BccI	CCATC	9 cut(s)	43, 674, 709, 788, 1645, 1803, 2426, 2617, 2739
BceAI	ACGGC	2 cut(s)	818, 2081
BciT130I	CCWGG	5 cut(s)	602, 686, 858, 1246, 2328
BciVI	GTATCC	1 cut(s)	2672
BclI	TGATCA	2 cut(s)	190, 1528
BcnI	CCSGG	3 cut(s)	620, 1011, 1012
BcoDI	GTCTC	3 cut(s)	813, 1572, 2817
BfmI	CTRYAG	2 cut(s)	431, 2844
BfuI	GTATCC	1 cut(s)	2672
BglII	AGATCT	3 cut(s)	990, 1831, 2528
BisI	GCNGC	7 cut(s)	6, 183, 549, 909, 969, 1643, 2069
BlsI	GCNGC	7 cut(s)	7, 184, 550, 910, 970, 1644, 2070
BmcAI	AGTACT	4 cut(s)	380, 1593, 2356, 2850
Bme1390I	CCNGG	8 cut(s)	602, 620, 686, 858, 1011, 1012, 1246, 2328
Bme18I	GGWCC	3 cut(s)	897, 1117, 2600
BmeT110I	CYCGRG	4 cut(s)	67, 222, 1010, 1295
BmgT120I	GGNCC	5 cut(s)	479, 788, 897, 1117, 2600
BmiI	GGNNCC	6 cut(s)	85, 540, 1118, 1119, 2236, 2553
BmrFI	CCNGG	8 cut(s)	602, 620, 686, 858, 1011, 1012, 1246, 2328
BmrI	ACTGGG	1 cut(s)	1115
BmsI	GCATC	4 cut(s)	245, 535, 1988, 2058
BmuI	ACTGGG	1 cut(s)	1115
BoxI	GACNNNNGTC	1 cut(s)	895
BpiI	GAAGAC	1 cut(s)	106
BpmI	CTGGAG	1 cut(s)	966
Bpu10I	CCTNAGC	1 cut(s)	1638
BpuEI	CTTGAG	4 cut(s)	539, 731, 1572, 1973
BpuMI	CCSGG	3 cut(s)	620, 1011, 1012
Bsa29I	ATCGAT	2 cut(s)	248, 2098
BsaBI	GATNNNNATC	1 cut(s)	1173
BsaI	GGTCTC	1 cut(s)	1572
BsaXI	ACNNNNNCTCC	4 cut(s)	810, 840, 2226, 2256
Bsc4I	CCNNNNNNNGG	4 cut(s)	625, 626, 857, 2713
Bse1I	ACTGG	6 cut(s)	365, 949, 1121, 1933, 2005, 2373
Bse3DI	GCAATG	2 cut(s)	443, 2406
Bse8I	GATNNNNATC	1 cut(s)	1173
BseBI	CCWGG	5 cut(s)	602, 686, 858, 1246, 2328
BseCI	ATCGAT	2 cut(s)	248, 2098
BseGI	GGATG	7 cut(s)	26, 236, 529, 1021, 1174, 1222, 2049
BseJI	GATNNNNATC	1 cut(s)	1173
BseLI	CCNNNNNNNGG	4 cut(s)	625, 626, 857, 2713
BseMI	GCAATG	2 cut(s)	443, 2406
BseMII	CTCAG	6 cut(s)	33, 1392, 1593, 1721, 1758, 1878
BseNI	ACTGG	6 cut(s)	365, 949, 1121, 1933, 2005, 2373
BseRI	GAGGAG	3 cut(s)	831, 1391, 2599
BseSI	GKGCMC	2 cut(s)	513, 1659
BseXI	GCAGC	6 cut(s)	169, 535, 895, 980, 1629, 2080
BseYI	CCCAGC	1 cut(s)	2343
BsgI	GTGCAG	2 cut(s)	894, 1178
Bsh1236I	CGCG	5 cut(s)	266, 329, 2186, 2250, 2658
Bsh1285I	CGRYCG	1 cut(s)	2656
BshFI	GGCC	6 cut(s)	147, 481, 684, 790, 1765, 2372
BshVI	ATCGAT	2 cut(s)	248, 2098
BsiEI	CGRYCG	1 cut(s)	2656
BsiHKAI	GWGCWC	1 cut(s)	1659
BsiHKCI	CYCGRG	4 cut(s)	67, 222, 1010, 1295
BsiSI	CCGG	2 cut(s)	620, 1011
BslFI	GGGAC	4 cut(s)	833, 1130, 2109, 2326
BslI	CCNNNNNNNGG	4 cut(s)	625, 626, 857, 2713
BsmAI	GTCTC	3 cut(s)	813, 1572, 2817
BsmFI	GGGAC	4 cut(s)	833, 1130, 2109, 2326
BsmI	GAATGC	5 cut(s)	314, 985, 1188, 2180, 2708
BsnI	GGCC	6 cut(s)	147, 481, 684, 790, 1765, 2372
Bso31I	GGTCTC	1 cut(s)	1572
BsoBI	CYCGRG	4 cut(s)	67, 222, 1010, 1295
Bsp1286I	GDGCHC	2 cut(s)	513, 1659
Bsp1407I	TGTACA	1 cut(s)	2035
Bsp19I	CCATGG	3 cut(s)	725, 1023, 1521
Bsp68I	TCGCGA	1 cut(s)	2186
BspACI	CCGC	7 cut(s)	5, 266, 327, 329, 831, 2248, 2549
BspANI	GGCC	6 cut(s)	147, 481, 684, 790, 1765, 2372
BspCNI	CTCAG	6 cut(s)	32, 1393, 1594, 1720, 1759, 1879
BspDI	ATCGAT	2 cut(s)	248, 2098
BspFNI	CGCG	5 cut(s)	266, 329, 2186, 2250, 2658
BspHI	TCATGA	1 cut(s)	2809
BspLI	GGNNCC	6 cut(s)	85, 540, 1118, 1119, 2236, 2553
BspPI	GGATC	6 cut(s)	1425, 1628, 2546, 2559, 2635, 2843
BspTNI	GGTCTC	1 cut(s)	1572
BsrDI	GCAATG	2 cut(s)	443, 2406
BsrGI	TGTACA	1 cut(s)	2035
BsrI	ACTGG	6 cut(s)	365, 949, 1121, 1933, 2005, 2373
BssNAI	GTATAC	1 cut(s)	2414
BssT1I	CCWWGG	7 cut(s)	309, 725, 957, 1023, 1521, 2153, 2707
Bst1107I	GTATAC	1 cut(s)	2414
Bst2UI	CCWGG	5 cut(s)	602, 686, 858, 1246, 2328
Bst4CI	ACNGT	9 cut(s)	383, 515, 894, 1267, 1288, 2340, 2559, 2654, 2801
Bst6I	CTCTTC	2 cut(s)	1863, 2451
BstAPI	GCANNNNNTGC	1 cut(s)	320
BstAUI	TGTACA	1 cut(s)	2035
BstC8I	GCNNGC	4 cut(s)	82, 405, 579, 933
BstDSI	CCRYGG	5 cut(s)	327, 725, 1023, 1521, 2555
BstF5I	GGATG	7 cut(s)	26, 236, 529, 1021, 1174, 1222, 2049
BstFNI	CGCG	5 cut(s)	266, 329, 2186, 2250, 2658
BstHHI	GCGC	2 cut(s)	2049, 2660
BstMAI	GTCTC	3 cut(s)	813, 1572, 2817
BstMCI	CGRYCG	1 cut(s)	2656
BstMWI	GCNNNNNNNGC	5 cut(s)	320, 478, 574, 914, 968
BstNI	CCWGG	5 cut(s)	602, 686, 858, 1246, 2328
BstNSI	RCATGY	3 cut(s)	935, 1352, 1691
BstPAI	GACNNNNGTC	1 cut(s)	895
BstSCI	CCNGG	8 cut(s)	600, 618, 684, 856, 1009, 1010, 1244, 2326
BstSFI	CTRYAG	2 cut(s)	431, 2844
BstSLI	GKGCMC	2 cut(s)	513, 1659
BstUI	CGCG	5 cut(s)	266, 329, 2186, 2250, 2658
BstV1I	GCAGC	6 cut(s)	169, 535, 895, 980, 1629, 2080
BstV2I	GAAGAC	1 cut(s)	106
BstX2I	RGATCY	7 cut(s)	990, 1417, 1633, 1831, 2528, 2551, 2627
BstXI	CCANNNNNNTGG	1 cut(s)	1128
BstYI	RGATCY	7 cut(s)	990, 1417, 1633, 1831, 2528, 2551, 2627
BstZ17I	GTATAC	1 cut(s)	2414
Bsu15I	ATCGAT	2 cut(s)	248, 2098
BsuI	GTATCC	1 cut(s)	2672
BsuRI	GGCC	6 cut(s)	147, 481, 684, 790, 1765, 2372
BsuTUI	ATCGAT	2 cut(s)	248, 2098
BtgI	CCRYGG	5 cut(s)	327, 725, 1023, 1521, 2555
BtgZI	GCGATG	1 cut(s)	2039
BtsCI	GGATG	7 cut(s)	26, 236, 529, 1021, 1174, 1222, 2049
BtsI	GCAGTG	2 cut(s)	1161, 2800
BtsIMutI	CAGTG	8 cut(s)	942, 1128, 1161, 1566, 1599, 2223, 2380, 2800
BtuMI	TCGCGA	1 cut(s)	2186
Cac8I	GCNNGC	4 cut(s)	82, 405, 579, 933
CaiI	CAGNNNCTG	1 cut(s)	548
CciI	TCATGA	1 cut(s)	2809
CfoI	GCGC	2 cut(s)	2049, 2660
Cfr13I	GGNCC	5 cut(s)	479, 788, 897, 1117, 2600
Cfr42I	CCGCGG	1 cut(s)	330
Cfr9I	CCCGGG	1 cut(s)	1010
ClaI	ATCGAT	2 cut(s)	248, 2098
Csp6I	GTAC	7 cut(s)	379, 1006, 1592, 2036, 2355, 2802, 2849
CviQI	GTAC	7 cut(s)	379, 1006, 1592, 2036, 2355, 2802, 2849
DraI	TTTAAA	1 cut(s)	1320
DrdI	GACNNNNNNGTC	1 cut(s)	2755
DseDI	GACNNNNNNGTC	1 cut(s)	2755
EaeI	YGGCCR	2 cut(s)	145, 682
Eam1104I	CTCTTC	2 cut(s)	1863, 2451
EarI	CTCTTC	2 cut(s)	1863, 2451
EciI	GGCGGA	1 cut(s)	2564
Eco130I	CCWWGG	7 cut(s)	309, 725, 957, 1023, 1521, 2153, 2707
Eco31I	GGTCTC	1 cut(s)	1572
Eco47I	GGWCC	3 cut(s)	897, 1117, 2600
Eco57I	CTGAAG	2 cut(s)	2520, 2553
Eco88I	CYCGRG	4 cut(s)	67, 222, 1010, 1295
EcoO109I	RGGNCCY	2 cut(s)	479, 1117
EcoRI	GAATTC	2 cut(s)	269, 1455
EcoRII	CCWGG	5 cut(s)	600, 684, 856, 1244, 2326
EcoT14I	CCWWGG	7 cut(s)	309, 725, 957, 1023, 1521, 2153, 2707
ErhI	CCWWGG	7 cut(s)	309, 725, 957, 1023, 1521, 2153, 2707
FaqI	GGGAC	4 cut(s)	833, 1130, 2109, 2326
FauNDI	CATATG	5 cut(s)	373, 964, 2191, 2578, 2828
FbaI	TGATCA	2 cut(s)	190, 1528
FblI	GTMKAC	2 cut(s)	1840, 2413
Fnu4HI	GCNGC	7 cut(s)	6, 183, 549, 909, 969, 1643, 2069
FokI	GGATG	7 cut(s)	13, 223, 536, 1028, 1161, 1229, 2036
Fsp4HI	GCNGC	7 cut(s)	6, 183, 549, 909, 969, 1643, 2069
GlaI	GCGC	2 cut(s)	2048, 2659
GluI	GCNGC	7 cut(s)	6, 183, 549, 909, 969, 1643, 2069
GsaI	CCCAGC	1 cut(s)	2347
GsuI	CTGGAG	1 cut(s)	966
HaeIII	GGCC	6 cut(s)	147, 481, 684, 790, 1765, 2372
HapII	CCGG	2 cut(s)	620, 1011
HhaI	GCGC	2 cut(s)	2049, 2660
Hin6I	GCGC	2 cut(s)	2047, 2658
HinP1I	GCGC	2 cut(s)	2047, 2658
HincII	GTYRAC	1 cut(s)	2014
HindII	GTYRAC	1 cut(s)	2014
HindIII	AAGCTT	1 cut(s)	503
HinfI	GANTC	8 cut(s)	230, 596, 1481, 1538, 1711, 1813, 2122, 2138
HpaII	CCGG	2 cut(s)	620, 1011
HphI	GGTGA	5 cut(s)	785, 820, 1909, 2053, 2276
Hpy166II	GTNNAC	9 cut(s)	900, 1657, 1685, 1841, 1900, 2014, 2245, 2336, 2414
Hpy188I	TCNGA	5 cut(s)	1510, 1549, 1710, 1939, 2533
Hpy8I	GTNNAC	9 cut(s)	900, 1657, 1685, 1841, 1900, 2014, 2245, 2336, 2414
HpyCH4III	ACNGT	9 cut(s)	383, 515, 894, 1267, 1288, 2340, 2559, 2654, 2801
HpyCH4IV	ACGT	3 cut(s)	59, 213, 1096
HpyF10VI	GCNNNNNNNGC	5 cut(s)	320, 478, 574, 914, 968
HpySE526I	ACGT	3 cut(s)	59, 213, 1096
HspAI	GCGC	2 cut(s)	2047, 2658
KflI	GGGWCCC	1 cut(s)	1117
Ksp22I	TGATCA	2 cut(s)	190, 1528
KspI	CCGCGG	1 cut(s)	330
LmnI	GCTCC	6 cut(s)	89, 469, 1378, 1503, 1523, 2234
Lsp1109I	GCAGC	6 cut(s)	169, 535, 895, 980, 1629, 2080
LweI	GCATC	4 cut(s)	245, 535, 1988, 2058
MaeII	ACGT	3 cut(s)	59, 213, 1096
MaeIII	GTNAC	8 cut(s)	748, 826, 995, 1252, 1618, 1795, 2648, 2795
MfeI	CAATTG	1 cut(s)	456
MflI	RGATCY	7 cut(s)	990, 1417, 1633, 1831, 2528, 2551, 2627
MhlI	GDGCHC	2 cut(s)	513, 1659
MlsI	TGGCCA	1 cut(s)	684
MluNI	TGGCCA	1 cut(s)	684
MlyI	GAGTC	4 cut(s)	590, 1475, 1547, 2131
MmeI	TCCRAC	6 cut(s)	111, 793, 1202, 2212, 2443, 2656
Mox20I	TGGCCA	1 cut(s)	684
MroXI	GAANNNNTTC	3 cut(s)	103, 1137, 2180
MscI	TGGCCA	1 cut(s)	684
MseI	TTAA	6 cut(s)	357, 660, 1319, 1503, 1743, 1971
MslI	CAYNNNNRTG	2 cut(s)	1364, 2814
Msp20I	TGGCCA	1 cut(s)	684
MspA1I	CMGCKG	2 cut(s)	329, 2774
MspI	CCGG	2 cut(s)	620, 1011
MspR9I	CCNGG	8 cut(s)	602, 620, 686, 858, 1011, 1012, 1246, 2328
MunI	CAATTG	1 cut(s)	456
Mva1269I	GAATGC	5 cut(s)	314, 985, 1188, 2180, 2708
MvaI	CCWGG	5 cut(s)	602, 686, 858, 1246, 2328
MvnI	CGCG	5 cut(s)	266, 329, 2186, 2250, 2658
MwoI	GCNNNNNNNGC	5 cut(s)	320, 478, 574, 914, 968
NciI	CCSGG	3 cut(s)	620, 1011, 1012
NcoI	CCATGG	3 cut(s)	725, 1023, 1521
NdeI	CATATG	5 cut(s)	373, 964, 2191, 2578, 2828
NlaIV	GGNNCC	6 cut(s)	85, 540, 1118, 1119, 2236, 2553
NmeAIII	GCCGAG	1 cut(s)	173
NmuCI	GTSAC	3 cut(s)	748, 826, 2795
NruI	TCGCGA	1 cut(s)	2186
NspI	RCATGY	3 cut(s)	935, 1352, 1691
PaeI	GCATGC	1 cut(s)	935
PaeR7I	CTCGAG	1 cut(s)	67
PagI	TCATGA	1 cut(s)	2809
PciI	ACATGT	1 cut(s)	1348
PcsI	WCGNNNNNNNCGW	1 cut(s)	65
PctI	GAATGC	5 cut(s)	314, 985, 1188, 2180, 2708
PdmI	GAANNNNTTC	3 cut(s)	103, 1137, 2180
PfeI	GAWTC	4 cut(s)	230, 1711, 1813, 2138
PflFI	GACNNNGTC	2 cut(s)	824, 1484
PkrI	GCNGC	7 cut(s)	7, 184, 550, 910, 970, 1644, 2070
PleI	GAGTC	4 cut(s)	590, 1475, 1546, 2130
PpsI	GAGTC	4 cut(s)	590, 1475, 1546, 2130
PpuMI	RGGWCCY	1 cut(s)	1117
PscI	ACATGT	1 cut(s)	1348
PshAI	GACNNNNGTC	1 cut(s)	895
PsiI	TTATAA	1 cut(s)	1847
Psp5II	RGGWCCY	1 cut(s)	1117
Psp6I	CCWGG	5 cut(s)	600, 684, 856, 1244, 2326
PspFI	CCCAGC	1 cut(s)	2343
PspGI	CCWGG	5 cut(s)	600, 684, 856, 1244, 2326
PspN4I	GGNNCC	6 cut(s)	85, 540, 1118, 1119, 2236, 2553
PspPI	GGNCC	5 cut(s)	479, 788, 897, 1117, 2600
PspPPI	RGGWCCY	1 cut(s)	1117
PsrI	GAACNNNNNNTAC	1 cut(s)	2832
PstNI	CAGNNNCTG	1 cut(s)	548
PsuI	RGATCY	7 cut(s)	990, 1417, 1633, 1831, 2528, 2551, 2627
PsyI	GACNNNGTC	2 cut(s)	824, 1484
PvuII	CAGCTG	1 cut(s)	2774
RruI	TCGCGA	1 cut(s)	2186
RsaI	GTAC	7 cut(s)	380, 1007, 1593, 2037, 2356, 2803, 2850
RsaNI	GTAC	7 cut(s)	379, 1006, 1592, 2036, 2355, 2802, 2849
RseI	CAYNNNNRTG	2 cut(s)	1364, 2814
SacII	CCGCGG	1 cut(s)	330
SaqAI	TTAA	6 cut(s)	357, 660, 1319, 1503, 1743, 1971
SatI	GCNGC	7 cut(s)	6, 183, 549, 909, 969, 1643, 2069
Sau96I	GGNCC	5 cut(s)	479, 788, 897, 1117, 2600
ScaI	AGTACT	4 cut(s)	380, 1593, 2356, 2850
SchI	GAGTC	4 cut(s)	590, 1475, 1547, 2131
ScrFI	CCNGG	8 cut(s)	602, 620, 686, 858, 1011, 1012, 1246, 2328
SduI	GDGCHC	2 cut(s)	513, 1659
SfaNI	GCATC	4 cut(s)	245, 535, 1988, 2058
SfcI	CTRYAG	2 cut(s)	431, 2844
Sfr274I	CTCGAG	1 cut(s)	67
Sfr303I	CCGCGG	1 cut(s)	330
SgrBI	CCGCGG	1 cut(s)	330
SinI	GGWCC	3 cut(s)	897, 1117, 2600
SlaI	CTCGAG	1 cut(s)	67
SmaI	CCCGGG	1 cut(s)	1012
SmiMI	CAYNNNNRTG	2 cut(s)	1364, 2814
SmlI	CTYRAG	5 cut(s)	67, 518, 710, 1587, 1988
SmoI	CTYRAG	5 cut(s)	67, 518, 710, 1587, 1988
SphI	GCATGC	1 cut(s)	935
SsiI	CCGC	7 cut(s)	5, 266, 327, 329, 831, 2248, 2549
SspI	AATATT	1 cut(s)	1209
StyD4I	CCNGG	8 cut(s)	600, 618, 684, 856, 1009, 1010, 1244, 2326
StyI	CCWWGG	7 cut(s)	309, 725, 957, 1023, 1521, 2153, 2707
TaaI	ACNGT	9 cut(s)	383, 515, 894, 1267, 1288, 2340, 2559, 2654, 2801
TaiI	ACGT	3 cut(s)	62, 216, 1099
TaqII	GACCGA	1 cut(s)	2588
TatI	WGTACW	5 cut(s)	378, 1591, 2035, 2354, 2848
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	4 cut(s)	230, 1711, 1813, 2138
Tru1I	TTAA	6 cut(s)	357, 660, 1319, 1503, 1743, 1971
Tru9I	TTAA	6 cut(s)	357, 660, 1319, 1503, 1743, 1971
TscAI	CASTG	8 cut(s)	949, 1128, 1161, 1573, 1606, 2230, 2380, 2800
TseFI	GTSAC	3 cut(s)	748, 826, 2795
TseI	GCWGC	6 cut(s)	182, 548, 908, 968, 1642, 2068
Tsp45I	GTSAC	3 cut(s)	748, 826, 2795
TspGWI	ACGGA	1 cut(s)	1427
TspMI	CCCGGG	1 cut(s)	1010
TspRI	CASTG	8 cut(s)	949, 1128, 1161, 1573, 1606, 2230, 2380, 2800
Tth111I	GACNNNGTC	2 cut(s)	824, 1484
VneI	GTGCAC	1 cut(s)	1655
VpaK11BI	GGWCC	3 cut(s)	897, 1117, 2600
XapI	RAATTY	9 cut(s)	269, 732, 764, 920, 1136, 1455, 1772, 2216, 2786
XbaI	TCTAGA	2 cut(s)	1459, 2428
XceI	RCATGY	3 cut(s)	935, 1352, 1691
XhoI	CTCGAG	1 cut(s)	67
XmaI	CCCGGG	1 cut(s)	1010
XmiI	GTMKAC	2 cut(s)	1840, 2413
XmnI	GAANNNNTTC	3 cut(s)	103, 1137, 2180
ZrmI	AGTACT	4 cut(s)	380, 1593, 2356, 2850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.