Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Forward (+)

7411257 .. 7417633

Gene Structure 6377 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00084990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGCGGTTTCTCAATTCTATTGTAGTGGAGCAATGGAGTCGCTGCACTACAAATCGCAGGGGAAACTGATCGATTTCGGCTCCAGGAGGAGCTTCAGTTCGCGGTTGTTGCTGGCGAGGACGTTGAATTTGAATCCGAGGACTCATCGGAGCCGCCACCGGAGTTGTTCGGTGTCGAAATTGGACTCTGATGAAAATGTGTTGTTAACACCTCATTCGCACCTGATGCTGTATCCATCGCTTCAAGTATCAAATACCATGCTGAGTTTACGCCGTCGTTTTCTCCGGAGAAATTTGAGCTTCCCAAAGGCCTACTTTGCAACTGCGCAAAGTGTCCGTGATGCGCTTATTGTTAACTGGAATGCAACGAATGAATATTATGAAAAGTTGCATGTAAAGCAGGCATATTATTTGTCAATGGAATTTCTACAGGGTAGAGCACTGTTAAATGCAGTTGGTAATTTGGAGCTAGCAGGTGCATATGCAGAGGCTTTAAGCAAGCTTGGACACAAATTAGAAACTGTGGCTGACCAGGAGCCAGATGCTGCCCTCGGGAATGGGGGTCTCGGTCGGCTTGCCTCATGCTTCTTGGATTCTTTGGCAACTTTGAACTACCCAGCATGGGGTTATGGACTTAGGTACAAGTATGGGTTATTTAAACAGCGAATTACCAAAGACGGTCAAGAAGAAGTAGCTGAGGATTGGCTTGAGCTGGGAAACCCCTGGGAGATTGTGAGGAATGATGTTTCTTATCATGTAAAATTCTACGGCAATGTTGCTACTGGATCAGACGGAAAACGGCATTGGATTGGAGGAGAAGATATAAAGGCCGTTGCTTATGATGTTCCAATACCAGGATACAAAACTAAAACAACTATCAACTTGCGGCTTTGGTCAACCAAAGCTCCGTCAGAGGATTTTGATTTATATTCTTTTAATTCTGGGGAGCACACAAAAGCATGTGAAGCTTTAGCAAATGCCGAAAAGATTTGCTACGTACTTTATCCTGGAGATGACTCACTGGAGGGAAAGACACTTCGTCTGAAGCAACAATATACTTTATGTTCAGCTTCTCTCCAAGATGTTGTTGCACGTTTTGAGAGAAGATCCGGAACAAACATAAACTGGGAAGAAACGGTTGCATATACAAACCATACTGTTCTACCTGAGGCATTGGAGAAATGGAGTTTGGAACTTATGCAGAAACTGCTTCCTCGACATGTGGAGATCATAGAACTGATAGATGAGGAGCTCATTAACACCATAGTCTCGGAGTATGGTACAGAAGATTGTGATTTATTAGAAAAGAAACTGAAGGAGATGAGAATCTTAGAAAATGTTGATTTGCCTGCCACATATGCAAAGTTATTTGTTAAACCCAAAGAAAGCTCTGTTGTTCTTCCCACTGAAAAACTTGAAGATTCAAAAAAAGGATGTCGGGGCCGTGGTCATGCAGTAAATGGTGTTGCTGAGATACATAGTGAAATAGTAAAGGATGAAGTATTCAATTCATTTTATAAATTGTGGCCTAAGAAGTTTCAAAACAAGACAAATGGCGTGACACCAAGAAGATGGATCCGCTTCTGCAATCCAGATTTGAGTAATATTCTAACCAAATGGATTGGCACAGAAGACTGGGTCTTAAATACTGAAAAACTGGCCGAGTTACGACAGTTTGCGGATGATGAGGATCTCCAAACTCAATGGAGGCAAGCAAAAAGGAGCAACAAGTTGAAAGTTGCATCGTTCATTAAAGAAAAAACAGGATTTTCTGTCAACCCTGAAGCAATGTTTGATATCCAGGTGAAGCGCATTCATGAATACAAGAGACAACTTATGAATATTTTGGGAATTGTTTACCGGTACAAGAAAATGAAAGAAATGAGTGCTTCACAAAGGAAAGCAAAGTTTGTTCCACGTGTTTGTATGTTCGGAGGAAAAGCATTTGCAACGTATGTACAAGCCAAGAGAATTGTGAAGTTTATCACAGATGTCGCGGAGACTGTAAATCATGATCCTAGTATAGGAAATGAAGGATTTGGCCGTGCTGATTACTTCCTTGTTGGCAAAGACTTCCCCAGTTACATAGAATGCCAAGAGAAGGTTGATGAGGCGTATCGGGACCAAAAGAAATGGACAAGAATGTCTATCCTGAACACAGCAGGCTCATCCAAGTTTAGCAGTGACAGAACCATCCACGAATATGCTAAAGACATATGGAACATTAACCCTGTCGAATTACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009414 GO:0009415 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009987 GO:0010035 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

748

Amino Acids

85.72

Weight (kDa)

8.81

Isoelectric Point (pI)

46.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	166 - 370	1e-79	Carbohydrate phosphorylase
Phosphorylase	PF00343	377 - 446	6.4e-16	Carbohydrate phosphorylase
Phosphorylase	PF00343	483 - 677	1.8e-78	Carbohydrate phosphorylase
Phosphorylase	PF00343	682 - 742	2.9e-22	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1518
AarI	CACCTGC	1 cut(s)	464
AasI	GACNNNNNNGTC	1 cut(s)	2143
Acc16I	TGCGCA	1 cut(s)	327
Acc36I	ACCTGC	1 cut(s)	464
AccII	CGCG	2 cut(s)	103, 1997
AccIII	TCCGGA	2 cut(s)	285, 1109
AciI	CCGC	7 cut(s)	5, 103, 154, 886, 1579, 1679, 1997
AclWI	GGATC	6 cut(s)	793, 1101, 1570, 1583, 1698, 2009
AcoI	YGGCCR	2 cut(s)	1659, 2041
AcsI	RAATTY	4 cut(s)	127, 292, 422, 761
AcuI	CTGAAG	4 cut(s)	79, 1064, 1334, 1803
AcvI	CACGTG	1 cut(s)	1919
AfaI	GTAC	5 cut(s)	641, 999, 1282, 1865, 1959
AfiI	CCNNNNNNNGG	5 cut(s)	622, 623, 854, 2024, 2101
AflIII	ACRYGT	2 cut(s)	1219, 1918
AgeI	ACCGGT	1 cut(s)	1860
AgsI	TTSAA	9 cut(s)	127, 133, 245, 610, 1418, 1425, 1507, 1541, 1735
AhdI	GACNNNNNGTC	1 cut(s)	1038
AjnI	CCWGG	6 cut(s)	83, 531, 722, 853, 1006, 1800
AjuI	GAANNNNNNNTTGG	4 cut(s)	787, 819, 1172, 1204
AloI	GAACNNNNNNTCC	2 cut(s)	82, 114
Alw21I	GWGCWC	3 cut(s)	442, 951, 1254
Alw26I	GTCTC	4 cut(s)	569, 1273, 1822, 1994
AlwI	GGATC	6 cut(s)	793, 1101, 1570, 1583, 1698, 2009
AlwNI	CAGNNNCTG	2 cut(s)	545, 1207
Ama87I	CYCGRG	1 cut(s)	551
Aor13HI	TCCGGA	2 cut(s)	285, 1109
AoxI	GGCC	6 cut(s)	309, 828, 1441, 1526, 1659, 2041
ApeKI	GCWGC	2 cut(s)	43, 545
ApoI	RAATTY	4 cut(s)	127, 292, 422, 761
ArsI	GACNNNNNNTTYG	2 cut(s)	112, 144
AsiGI	ACCGGT	1 cut(s)	1860
AspLEI	GCGC	3 cut(s)	328, 346, 1812
AspS9I	GGNCC	2 cut(s)	1441, 2122
AsuHPI	GGTGA	1 cut(s)	1816
AsuNHI	GCTAGC	1 cut(s)	469
AvaI	CYCGRG	1 cut(s)	551
AvaII	GGWCC	1 cut(s)	2122
AxyI	CCTNAGG	1 cut(s)	1167
BamHI	GGATCC	1 cut(s)	1575
BanII	GRGCYC	1 cut(s)	1254
BbrPI	CACGTG	1 cut(s)	1919
BbsI	GAAGAC	1 cut(s)	1638
Bbv12I	GWGCWC	3 cut(s)	442, 951, 1254
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	2 cut(s)	30, 532
BccI	CCATC	3 cut(s)	244, 1566, 2201
BceAI	ACGGC	6 cut(s)	258, 784, 815, 815, 1428, 2028
BcgI	CGANNNNNNTGC	2 cut(s)	21, 55
BciT130I	CCWGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
BciVI	GTATCC	2 cut(s)	243, 851
BcoDI	GTCTC	4 cut(s)	569, 1273, 1822, 1994
BfaI	CTAG	2 cut(s)	470, 2019
BfmI	CTRYAG	1 cut(s)	428
BfuAI	ACCTGC	1 cut(s)	464
BfuI	GTATCC	2 cut(s)	243, 851
BisI	GCNGC	4 cut(s)	44, 154, 546, 887
BlsI	GCNGC	4 cut(s)	45, 155, 547, 888
Bme1390I	CCNGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
Bme18I	GGWCC	1 cut(s)	2122
BmeRI	GACNNNNNGTC	1 cut(s)	1038
BmeT110I	CYCGRG	1 cut(s)	551
BmgT120I	GGNCC	2 cut(s)	1441, 2122
BmiI	GGNNCC	6 cut(s)	82, 152, 537, 1442, 1577, 2123
BmrFI	CCNGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
BmrI	ACTGGG	3 cut(s)	1135, 1645, 2073
BmsI	GCATC	4 cut(s)	216, 331, 532, 1751
BmtI	GCTAGC	1 cut(s)	473
BmuI	ACTGGG	3 cut(s)	1135, 1645, 2073
BpiI	GAAGAC	1 cut(s)	1638
BpmI	CTGGAG	3 cut(s)	67, 1029, 1043
Bpu10I	CCTNAGC	1 cut(s)	696
BpuEI	CTTGAG	1 cut(s)	728
Bsa29I	ATCGAT	1 cut(s)	72
BsaAI	YACGTR	2 cut(s)	997, 1919
BsaBI	GATNNNNATC	2 cut(s)	1325, 1689
BsaI	GGTCTC	1 cut(s)	569
BsaJI	CCNNGG	5 cut(s)	137, 550, 722, 723, 1444
BsaWI	WCCGGW	4 cut(s)	159, 285, 1109, 1860
BsaXI	ACNNNNNCTCC	4 cut(s)	82, 112, 889, 919
Bsc4I	CCNNNNNNNGG	5 cut(s)	622, 623, 854, 2024, 2101
Bse118I	RCCGGY	1 cut(s)	1860
Bse1I	ACTGG	7 cut(s)	362, 787, 1026, 1130, 1640, 1662, 2079
Bse21I	CCTNAGG	1 cut(s)	1167
Bse3DI	GCAATG	3 cut(s)	39, 778, 1794
Bse8I	GATNNNNATC	2 cut(s)	1325, 1689
BseAI	TCCGGA	2 cut(s)	285, 1109
BseBI	CCWGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
BseCI	ATCGAT	1 cut(s)	72
BseDI	CCNNGG	5 cut(s)	137, 550, 722, 723, 1444
BseGI	GGATG	5 cut(s)	1439, 1501, 1687, 2168, 2193
BseJI	GATNNNNATC	2 cut(s)	1325, 1689
BseLI	CCNNNNNNNGG	5 cut(s)	622, 623, 854, 2024, 2101
BseMI	GCAATG	3 cut(s)	39, 778, 1794
BseMII	CTCAG	4 cut(s)	254, 687, 1158, 1461
BseNI	ACTGG	7 cut(s)	362, 787, 1026, 1130, 1640, 1662, 2079
BseRI	GAGGAG	3 cut(s)	103, 828, 1262
BseXI	GCAGC	2 cut(s)	30, 532
BseYI	CCCAGC	2 cut(s)	616, 712
BsgI	GTGCAG	1 cut(s)	29
Bsh1236I	CGCG	2 cut(s)	103, 1997
Bsh1285I	CGRYCG	1 cut(s)	571
BshFI	GGCC	6 cut(s)	311, 830, 1443, 1528, 1661, 2043
BshTI	ACCGGT	1 cut(s)	1860
BshVI	ATCGAT	1 cut(s)	72
BsiEI	CGRYCG	1 cut(s)	571
BsiHKAI	GWGCWC	3 cut(s)	442, 951, 1254
BsiHKCI	CYCGRG	1 cut(s)	551
BsiSI	CCGG	4 cut(s)	160, 286, 1110, 1861
BslFI	GGGAC	1 cut(s)	2135
BslI	CCNNNNNNNGG	5 cut(s)	622, 623, 854, 2024, 2101
BsmAI	GTCTC	4 cut(s)	569, 1273, 1822, 1994
BsmFI	GGGAC	1 cut(s)	2135
BsmI	GAATGC	3 cut(s)	367, 1812, 2096
BsnI	GGCC	6 cut(s)	311, 830, 1443, 1528, 1661, 2043
Bso31I	GGTCTC	1 cut(s)	569
BsoBI	CYCGRG	1 cut(s)	551
Bsp1286I	GDGCHC	3 cut(s)	442, 951, 1254
Bsp13I	TCCGGA	2 cut(s)	285, 1109
Bsp1407I	TGTACA	1 cut(s)	1957
Bsp143I	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
BspACI	CCGC	7 cut(s)	5, 103, 154, 886, 1579, 1679, 1997
BspANI	GGCC	6 cut(s)	311, 830, 1443, 1528, 1661, 2043
BspCNI	CTCAG	4 cut(s)	255, 688, 1159, 1462
BspDI	ATCGAT	1 cut(s)	72
BspEI	TCCGGA	2 cut(s)	285, 1109
BspFNI	CGCG	2 cut(s)	103, 1997
BspHI	TCATGA	2 cut(s)	1816, 2011
BspLI	GGNNCC	6 cut(s)	82, 152, 537, 1442, 1577, 2123
BspMI	ACCTGC	1 cut(s)	464
BspOI	GCTAGC	1 cut(s)	473
BspPI	GGATC	6 cut(s)	793, 1101, 1570, 1583, 1698, 2009
BspTNI	GGTCTC	1 cut(s)	569
BsrDI	GCAATG	3 cut(s)	39, 778, 1794
BsrFI	RCCGGY	1 cut(s)	1860
BsrGI	TGTACA	1 cut(s)	1957
BsrI	ACTGG	7 cut(s)	362, 787, 1026, 1130, 1640, 1662, 2079
BssAI	RCCGGY	1 cut(s)	1860
BssECI	CCNNGG	5 cut(s)	137, 550, 722, 723, 1444
BssMI	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
Bst2UI	CCWGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
Bst4CI	ACNGT	8 cut(s)	444, 523, 680, 1138, 1159, 1674, 2005, 2244
BstAPI	GCANNNNNTGC	2 cut(s)	226, 1207
BstAUI	TGTACA	1 cut(s)	1957
BstBAI	YACGTR	2 cut(s)	997, 1919
BstC8I	GCNNGC	8 cut(s)	114, 402, 471, 500, 576, 1350, 1713, 2164
BstDEI	CTNAG	7 cut(s)	263, 635, 696, 1167, 1330, 1470, 1530
BstDSI	CCRYGG	1 cut(s)	1444
BstENI	CCTNNNNNAGG	1 cut(s)	2022
BstF5I	GGATG	5 cut(s)	1439, 1501, 1687, 2168, 2193
BstFNI	CGCG	2 cut(s)	103, 1997
BstHHI	GCGC	3 cut(s)	328, 346, 1812
BstKTI	GATC	7 cut(s)	72, 788, 1109, 1230, 1578, 1693, 2017
BstMAI	GTCTC	4 cut(s)	569, 1273, 1822, 1994
BstMBI	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
BstMCI	CGRYCG	1 cut(s)	571
BstMWI	GCNNNNNNNGC	7 cut(s)	109, 226, 317, 397, 965, 1207, 1358
BstNI	CCWGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
BstNSI	RCATGY	3 cut(s)	395, 963, 1223
BstSCI	CCNGG	6 cut(s)	83, 531, 722, 853, 1006, 1800
BstSFI	CTRYAG	1 cut(s)	428
BstSNI	TACGTA	1 cut(s)	997
BstUI	CGCG	2 cut(s)	103, 1997
BstV1I	GCAGC	2 cut(s)	30, 532
BstV2I	GAAGAC	1 cut(s)	1638
BstX2I	RGATCY	3 cut(s)	1106, 1575, 1690
BstXI	CCANNNNNNTGG	1 cut(s)	1572
BstYI	RGATCY	3 cut(s)	1106, 1575, 1690
Bsu15I	ATCGAT	1 cut(s)	72
Bsu36I	CCTNAGG	1 cut(s)	1167
BsuI	GTATCC	2 cut(s)	243, 851
BsuRI	GGCC	6 cut(s)	311, 830, 1443, 1528, 1661, 2043
BsuTUI	ATCGAT	1 cut(s)	72
BtgI	CCRYGG	1 cut(s)	1444
BtgZI	GCGATG	1 cut(s)	222
BtsCI	GGATG	5 cut(s)	1439, 1501, 1687, 2168, 2193
BtsI	GCAGTG	1 cut(s)	2188
BtsIMutI	CAGTG	4 cut(s)	440, 1019, 1404, 2188
BveI	ACCTGC	1 cut(s)	464
Cac8I	GCNNGC	8 cut(s)	114, 402, 471, 500, 576, 1350, 1713, 2164
CaiI	CAGNNNCTG	2 cut(s)	545, 1207
CciI	TCATGA	2 cut(s)	1816, 2011
CfoI	GCGC	3 cut(s)	328, 346, 1812
Cfr10I	RCCGGY	1 cut(s)	1860
Cfr13I	GGNCC	2 cut(s)	1441, 2122
ClaI	ATCGAT	1 cut(s)	72
Csp6I	GTAC	5 cut(s)	640, 998, 1281, 1864, 1958
CspAI	ACCGGT	1 cut(s)	1860
CspCI	CAANNNNNGTGG	2 cut(s)	146, 181
CviQI	GTAC	5 cut(s)	640, 998, 1281, 1864, 1958
DdeI	CTNAG	7 cut(s)	263, 635, 696, 1167, 1330, 1470, 1530
DpnI	GATC	7 cut(s)	71, 787, 1108, 1229, 1577, 1692, 2016
DpnII	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
DraI	TTTAAA	1 cut(s)	658
DrdI	GACNNNNNNGTC	1 cut(s)	2143
DriI	GACNNNNNGTC	1 cut(s)	1038
DseDI	GACNNNNNNGTC	1 cut(s)	2143
EaeI	YGGCCR	2 cut(s)	1659, 2041
Eam1105I	GACNNNNNGTC	1 cut(s)	1038
Ecl136II	GAGCTC	1 cut(s)	1252
Eco105I	TACGTA	1 cut(s)	997
Eco147I	AGGCCT	1 cut(s)	311
Eco24I	GRGCYC	1 cut(s)	1254
Eco31I	GGTCTC	1 cut(s)	569
Eco32I	GATATC	1 cut(s)	1798
Eco47I	GGWCC	1 cut(s)	2122
Eco53kI	GAGCTC	1 cut(s)	1252
Eco57I	CTGAAG	4 cut(s)	79, 1064, 1334, 1803
Eco72I	CACGTG	1 cut(s)	1919
Eco81I	CCTNAGG	1 cut(s)	1167
Eco88I	CYCGRG	1 cut(s)	551
EcoICRI	GAGCTC	1 cut(s)	1252
EcoNI	CCTNNNNNAGG	1 cut(s)	2022
EcoRII	CCWGG	6 cut(s)	83, 531, 722, 853, 1006, 1800
EcoRV	GATATC	1 cut(s)	1798
EcoT38I	GRGCYC	1 cut(s)	1254
FalI	AAGNNNNNCTT	2 cut(s)	299, 331
FaqI	GGGAC	1 cut(s)	2135
FauNDI	CATATG	3 cut(s)	481, 1357, 2216
Fnu4HI	GCNGC	4 cut(s)	44, 154, 546, 887
FokI	GGATG	5 cut(s)	1446, 1508, 1694, 2155, 2180
FriOI	GRGCYC	1 cut(s)	1254
Fsp4HI	GCNGC	4 cut(s)	44, 154, 546, 887
FspBI	CTAG	2 cut(s)	470, 2019
FspI	TGCGCA	1 cut(s)	327
GlaI	GCGC	3 cut(s)	327, 345, 1811
GluI	GCNGC	4 cut(s)	44, 154, 546, 887
GsaI	CCCAGC	2 cut(s)	620, 716
GsuI	CTGGAG	3 cut(s)	67, 1029, 1043
HaeIII	GGCC	6 cut(s)	311, 830, 1443, 1528, 1661, 2043
HapII	CCGG	4 cut(s)	160, 286, 1110, 1861
HhaI	GCGC	3 cut(s)	328, 346, 1812
Hin6I	GCGC	3 cut(s)	326, 344, 1810
HinP1I	GCGC	3 cut(s)	326, 344, 1810
HincII	GTYRAC	4 cut(s)	207, 355, 897, 1777
HindII	GTYRAC	4 cut(s)	207, 355, 897, 1777
HindIII	AAGCTT	2 cut(s)	500, 966
HinfI	GANTC	8 cut(s)	38, 133, 142, 185, 593, 1016, 1326, 1421
HpaI	GTTAAC	2 cut(s)	207, 355
HpaII	CCGG	4 cut(s)	160, 286, 1110, 1861
HphI	GGTGA	1 cut(s)	1816
Hpy166II	GTNNAC	6 cut(s)	207, 269, 355, 897, 1777, 1858
Hpy188I	TCNGA	8 cut(s)	138, 150, 190, 790, 913, 1044, 1273, 1934
Hpy188III	TCNNGA	9 cut(s)	286, 553, 683, 1110, 1592, 1817, 2012, 2120, 2152
Hpy8I	GTNNAC	6 cut(s)	207, 269, 355, 897, 1777, 1858
Hpy99I	CGWCG	1 cut(s)	279
HpyAV	CCTTC	3 cut(s)	1309, 2027, 2095
HpyCH4III	ACNGT	8 cut(s)	444, 523, 680, 1138, 1159, 1674, 2005, 2244
HpyCH4IV	ACGT	5 cut(s)	122, 996, 1093, 1918, 1952
HpyF10VI	GCNNNNNNNGC	7 cut(s)	109, 226, 317, 397, 965, 1207, 1358
HpyF3I	CTNAG	7 cut(s)	263, 635, 696, 1167, 1330, 1470, 1530
HpySE526I	ACGT	5 cut(s)	122, 996, 1093, 1918, 1952
HspAI	GCGC	3 cut(s)	326, 344, 1810
Kpn2I	TCCGGA	2 cut(s)	285, 1109
KspAI	GTTAAC	2 cut(s)	207, 355
Kzo9I	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
Lsp1109I	GCAGC	2 cut(s)	30, 532
LweI	GCATC	4 cut(s)	216, 331, 532, 1751
MaeI	CTAG	2 cut(s)	470, 2019
MaeII	ACGT	5 cut(s)	122, 996, 1093, 1918, 1952
MaeIII	GTNAC	4 cut(s)	1558, 1665, 2081, 2183
MalI	GATC	7 cut(s)	71, 787, 1108, 1229, 1577, 1692, 2016
MboI	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
MboII	GAAGA	9 cut(s)	698, 830, 1116, 1142, 1298, 1391, 1430, 1581, 1643
MflI	RGATCY	3 cut(s)	1106, 1575, 1690
MhlI	GDGCHC	3 cut(s)	442, 951, 1254
MlyI	GAGTC	4 cut(s)	47, 136, 179, 1010
MroI	TCCGGA	2 cut(s)	285, 1109
MslI	CAYNNNNRTG	1 cut(s)	2202
MspI	CCGG	4 cut(s)	160, 286, 1110, 1861
MspR9I	CCNGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
Mva1269I	GAATGC	3 cut(s)	367, 1812, 2096
MvaI	CCWGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
MvnI	CGCG	2 cut(s)	103, 1997
MwoI	GCNNNNNNNGC	7 cut(s)	109, 226, 317, 397, 965, 1207, 1358
NdeI	CATATG	3 cut(s)	481, 1357, 2216
NdeII	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
NheI	GCTAGC	1 cut(s)	469
NlaIV	GGNNCC	6 cut(s)	82, 152, 537, 1442, 1577, 2123
NmeAIII	GCCGAG	1 cut(s)	1687
NmuCI	GTSAC	2 cut(s)	1558, 2183
NsbI	TGCGCA	1 cut(s)	327
NspI	RCATGY	3 cut(s)	395, 963, 1223
PagI	TCATGA	2 cut(s)	1816, 2011
PaqCI	CACCTGC	1 cut(s)	464
PasI	CCCWGGG	1 cut(s)	723
PceI	AGGCCT	1 cut(s)	311
PciI	ACATGT	1 cut(s)	1219
PctI	GAATGC	3 cut(s)	367, 1812, 2096
PfeI	GAWTC	4 cut(s)	133, 593, 1326, 1421
PflFI	GACNNNGTC	1 cut(s)	1637
PfoI	TCCNGGA	2 cut(s)	83, 1006
PinAI	ACCGGT	1 cut(s)	1860
PkrI	GCNGC	4 cut(s)	45, 155, 547, 888
PleI	GAGTC	4 cut(s)	46, 136, 179, 1010
PmaCI	CACGTG	1 cut(s)	1919
PmlI	CACGTG	1 cut(s)	1919
PpsI	GAGTC	4 cut(s)	46, 136, 179, 1010
Ppu21I	YACGTR	2 cut(s)	997, 1919
PscI	ACATGT	1 cut(s)	1219
PsiI	TTATAA	1 cut(s)	1518
Psp124BI	GAGCTC	1 cut(s)	1254
Psp6I	CCWGG	6 cut(s)	83, 531, 722, 853, 1006, 1800
PspCI	CACGTG	1 cut(s)	1919
PspFI	CCCAGC	2 cut(s)	616, 712
PspGI	CCWGG	6 cut(s)	83, 531, 722, 853, 1006, 1800
PspN4I	GGNNCC	6 cut(s)	82, 152, 537, 1442, 1577, 2123
PspPI	GGNCC	2 cut(s)	1441, 2122
PstNI	CAGNNNCTG	2 cut(s)	545, 1207
PsuI	RGATCY	3 cut(s)	1106, 1575, 1690
PsyI	GACNNNGTC	1 cut(s)	1637
RsaI	GTAC	5 cut(s)	641, 999, 1282, 1865, 1959
RsaNI	GTAC	5 cut(s)	640, 998, 1281, 1864, 1958
RseI	CAYNNNNRTG	1 cut(s)	2202
SacI	GAGCTC	1 cut(s)	1254
SatI	GCNGC	4 cut(s)	44, 154, 546, 887
Sau3AI	GATC	7 cut(s)	69, 785, 1106, 1227, 1575, 1690, 2014
Sau96I	GGNCC	2 cut(s)	1441, 2122
SchI	GAGTC	4 cut(s)	47, 136, 179, 1010
ScrFI	CCNGG	6 cut(s)	85, 533, 724, 855, 1008, 1802
SduI	GDGCHC	3 cut(s)	442, 951, 1254
SfaNI	GCATC	4 cut(s)	216, 331, 532, 1751
SfcI	CTRYAG	1 cut(s)	428
SinI	GGWCC	1 cut(s)	2122
SmiMI	CAYNNNNRTG	1 cut(s)	2202
SmlI	CTYRAG	1 cut(s)	707
SmoI	CTYRAG	1 cut(s)	707
SnaBI	TACGTA	1 cut(s)	997
SseBI	AGGCCT	1 cut(s)	311
SsiI	CCGC	7 cut(s)	5, 103, 154, 886, 1579, 1679, 1997
SspI	AATATT	3 cut(s)	377, 1606, 1843
SspMI	CTAG	2 cut(s)	470, 2019
SstI	GAGCTC	1 cut(s)	1254
StuI	AGGCCT	1 cut(s)	311
StyD4I	CCNGG	6 cut(s)	83, 531, 722, 853, 1006, 1800
TaaI	ACNGT	8 cut(s)	444, 523, 680, 1138, 1159, 1674, 2005, 2244
TaiI	ACGT	5 cut(s)	125, 999, 1096, 1921, 1955
TaqI	TCGA	4 cut(s)	72, 176, 1216, 2235
TaqII	GACCGA	1 cut(s)	557
TatI	WGTACW	1 cut(s)	1957
TauI	GCSGC	2 cut(s)	156, 889
TfiI	GAWTC	4 cut(s)	133, 593, 1326, 1421
TscAI	CASTG	4 cut(s)	447, 1026, 1411, 2188
TseFI	GTSAC	2 cut(s)	1558, 2183
TseI	GCWGC	2 cut(s)	43, 545
Tsp45I	GTSAC	2 cut(s)	1558, 2183
TspGWI	ACGGA	3 cut(s)	326, 807, 897
TspRI	CASTG	4 cut(s)	447, 1026, 1411, 2188
Tth111I	GACNNNGTC	1 cut(s)	1637
VpaK11BI	GGWCC	1 cut(s)	2122
XagI	CCTNNNNNAGG	1 cut(s)	2022
XapI	RAATTY	4 cut(s)	127, 292, 422, 761
XceI	RCATGY	3 cut(s)	395, 963, 1223
XspI	CTAG	2 cut(s)	470, 2019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.