Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Reverse (-)

76712821 .. 76719267

Gene Structure 6447 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021610

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3027 bp

ATGGCGGTTTCTCAATTCTCTTGTAGTGGAGCAATAGAGTCGTTGCATTACAAATCGCAGTCGAAACTGATCGATTTCGGCTCCAGGAGGAGCTTCAGTTCGCGGTTGTTGCTGGCGAGGACGGTGAATTTGAATCCGAGGACTCATCGGAGCCGCCACCGGAGGTCGGTTCTCGTCACCAACGTCATAAAGGATCCGGACGTCGCACAAGAAAATACAGGCAGCTCATTCACACCTGATGCTGTATCCATCGCTTCAAGTATCAAATACCATGCTGAGTTCACACCATCGTTTTCTCCGGAGAACTTTGAGCTTCCAAAGGCCTACTTTGCAACTGCACAAAGCGTCCGTGATGCGCTCATTGTTAACTGGAATGCAACGAATGAATATTATGAAAAGTTGCATGTAAAGCAGGCATATTATTTGTCAATGGAATTTCTACAGGGTAGAGCGCTGTTAAATGCAGTTGGTAATTTGGAGCTAGCAGGCGCATATGCAGAGGCTTTAAGCAAGCTTGGACACAAATTAGAAACTGTGGCTGACCAGGAGCCAGATGCTGCCCTCGGGAATGGGGGTCTCGGTCGGCTTGCCTCATGCTTCTTGGATTCTTTGGCAACTTTGAACTACCCAGCATGGGGTTATGGACTTAGGTACAAGTATGGGTTATTTAAACAGCGAATTACCAAAGACGGTCAAGAAGAAGTAGCTGAGGATTGGCTTGAGCTGGGAAATCCCTGGGAGATTGTGAGGAATGATGTTTCTTATCATGTAAAATTCTACGGCAATGTTGCTACTGGATCAGACGGAAAACGGCATTGGATTGGAGGAGAAGATATAGAGGCTGTTGCTTATGATGTTCCAATACCAGGATACAAAACTAAAACGACTATCAACTTGCGGCTTTGGTCAACCAAAGCTCCGTCAGAGGATTTTGATTTATATTCTTTTAATTCTGGGGAGCACACAAAAGCATGTGAAGCTTTAGCAAATGCCGAAAAGATTTGCTATGTACTTTATCCTGGCGATGACTCACTGGAGGGAAAGACACTTCGTCTGAAGCAACAATATACTTTATGTTCAGCTTCTCTCCAAGATATTGTTGCACGTTTTGAGAGAAGATCCGGAACAAACGTAAACTGGGAAGAGTTCCCCGAGAAGGTTGCAGTGCAGATGAATGACACTCATCCAACTCTCTGCATTCCTGAGCTGATTAGGATTTTAATGGATTTGAAGGGTTTGACATGGAAGGAGGCCTGGAATATTACTCAAAGAACGGTTGCATATACAAACCATACTGTTCTACCTGAGGCATTGGAGAAATGGAGTTTGGAACTTATGCAGAAGCTGCTTCCTCGACATGTGGAGATCATAGAACTGATAGATGAGGAGCTCATCAACACCATAGTCTCGGAGTATGGTACAGAAGATTGTGATTTATTAGAAAAGAAACTGAAGGAGATGAGAATCTTAGAAAATGTTGATTTGCCTGCCACATATGCAAAGTTATTTGTTAAACCCAAAGAAAGCTCCGTTGTTCTTCCCACTGAAAAACTTGAAGATTCAAAAAAGGATGTCGGGGCCGTTGATGAAGAAATTGCGCAAAAACTTGAAGACTCAAAAAAGGATGTCGGGGCCGTTGATGAAGAAATTGCGCAAAAACTTGAAGACTCAAAAAAGGATGTCAGGGCCATTGATGAAGAAATTGAGCCTGAGAAGAAACCCATAGAGGAAAAGGATGTCGGGGCCATTGATGAAGAAATTGAGCCGAAGAAGAAACCCATAGAGGAAAAGAAAAAGGCACCCCCAAAACCACCTAAGCTAGTTCGTATGGCAAACCTTTGTGTTGCAGGTGGTCATGCAGTAAATGGTGTTGCTGAGATACATAGTGAAATAGTAAAGGATGAAGTATTCAATTCCTTTTATAAATTGTGGCCTAAGAAGTTTCAAAACAAGACAAATGGTGTGACACCAAGAAGATGGATCCGCTTCTGCAATCCAGATTTGAGTAATATTCTAACCAAATGGATTGGCACAGAAGACTGGGTCTTAAATACAGAAAAACTGGCCGAGTTACAACAGTTTGCGGATGATGAGGATCTCCAAACTCAATGGAGGCAAGCAAAAAGGAGCAACAAGTTGAAAGTTGCATCATTCATTAAAGAAAAAACAGGATTTTCTGTCAACCCTGATGCAATGTTTGATATCCAGGTGAAGCGCATTCATGAATACAAGAGACAACTTATGAATATTTTGGGAATTGTTTACCGGTACAAGAAAATGAAAGAAATGAGTGCTTCACAAAGGAAAGAAAAGTTTGTTCCACGTGTTTGTATGTTCGGAGGAAAAGCATTTGCAACGTATGTACAAGCCAAGAGAATTGTGAAGTTTATCACAGATGTCGCGGAGACTGTAAATCATGATCCTAGTATAGGTGATCTACTAAAGGTTATCTTTGTACCTGATTATAATGTCAGTGTTGCTGAATTATTAATTCCTGCAAGTGAGCTCTCACAGCACATCAGTACTGCCGGGATGGAGGCCAGTGGCACCAGCAACATGAAGTTTGCAATGAATGGCTGCATCCTAATTGGGACTCTGGATGGAGCCAATGTTGAAATAAGAGAAGAGGTCGGAGCAGATAACTTTTTCCTCTTTGGTGCTGAAGCTCATGAGATTGCTGGGCTGAGAAAAGAACGAGCTGAGGGGAAGTTTGTTCCAGACCCCCGTTTTGAAGAAGTCAAGGAATTTGTCACAAGTGGTGTTTTTGGGTTGTACGATTATGATGACCTGATCGGATCCTTGGAAGGAAATGAAGGATTTGGCCGTGCTGATTACTTCCTTGTTGGCAAAGACTTCCCCAGTTACATAGAATGCCAAGAGAAGGTTGATGAGGCGTATCGGGACCAAAAGAAATGGACAAGAATGTCAATCCTGAACACAGCAGGCTCATCCAAGTTTAGCAGTGACAGAACCATCCACGAATATGCTAAAGACATATGGAACATTAACCCTGTCGAATTACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009414 GO:0009415 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009987 GO:0010035 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

1009

Amino Acids

114.1

Weight (kDa)

5.53

Isoelectric Point (pI)

43.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	170 - 492	4.1e-128	Carbohydrate phosphorylase
Phosphorylase	PF00343	602 - 1002	2.7e-166	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1923, 2466
AarI	CACCTGC	1 cut(s)	1838
AasI	GACNNNNNNGTC	1 cut(s)	2923
AatII	GACGTC	1 cut(s)	204
Acc16I	TGCGCA	2 cut(s)	1599, 1653
Acc36I	ACCTGC	1 cut(s)	1838
AccB1I	GGYRCC	2 cut(s)	1798, 2546
AccII	CGCG	2 cut(s)	103, 2402
AccIII	TCCGGA	3 cut(s)	196, 298, 1121
AciI	CCGC	7 cut(s)	5, 103, 154, 898, 1984, 2084, 2402
AcoI	YGGCCR	2 cut(s)	2064, 2821
AcsI	RAATTY	4 cut(s)	127, 434, 773, 2744
AcuI	CTGAAG	4 cut(s)	79, 1076, 1472, 2682
AcvI	CACGTG	1 cut(s)	2324
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	8 cut(s)	653, 1011, 1420, 2270, 2364, 2457, 2524, 2774
AfeI	AGCGCT	1 cut(s)	453
AfiI	CCNNNNNNNGG	7 cut(s)	166, 634, 635, 866, 1156, 2429, 2881
AflIII	ACRYGT	2 cut(s)	1357, 2323
AgeI	ACCGGT	1 cut(s)	2265
AhdI	GACNNNNNGTC	1 cut(s)	1050
AjnI	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2205
AjuI	GAANNNNNNNTTGG	4 cut(s)	799, 831, 1310, 1342
AloI	GAACNNNNNNTCC	2 cut(s)	82, 114
Alw21I	GWGCWC	3 cut(s)	963, 1392, 2508
Alw26I	GTCTC	4 cut(s)	581, 1411, 2227, 2399
AlwNI	CAGNNNCTG	2 cut(s)	557, 1345
Ama87I	CYCGRG	2 cut(s)	563, 1151
Aor13HI	TCCGGA	3 cut(s)	196, 298, 1121
Aor51HI	AGCGCT	1 cut(s)	453
ApeKI	GCWGC	4 cut(s)	222, 557, 1345, 2577
ApoI	RAATTY	4 cut(s)	127, 434, 773, 2744
ArsI	GACNNNNNNTTYG	4 cut(s)	112, 144, 2711, 2743
AseI	ATTAAT	1 cut(s)	2489
AsiGI	ACCGGT	1 cut(s)	2265
AspLEI	GCGC	6 cut(s)	358, 454, 491, 1600, 1654, 2217
AspS9I	GGNCC	5 cut(s)	1578, 1632, 1686, 1743, 2902
AsuC2I	CCSGG	1 cut(s)	2530
AsuHPI	GGTGA	4 cut(s)	136, 169, 2221, 2444
AsuNHI	GCTAGC	1 cut(s)	481
AvaI	CYCGRG	2 cut(s)	563, 1151
AvaII	GGWCC	1 cut(s)	2902
AxyI	CCTNAGG	1 cut(s)	1305
BamHI	GGATCC	3 cut(s)	193, 1980, 2795
BanI	GGYRCC	2 cut(s)	1798, 2546
BanII	GRGCYC	2 cut(s)	1392, 2508
BbrPI	CACGTG	1 cut(s)	2324
BbsI	GAAGAC	3 cut(s)	1617, 1671, 2043
Bbv12I	GWGCWC	3 cut(s)	963, 1392, 2508
BbvCI	CCTCAGC	2 cut(s)	708, 2700
BbvI	GCAGC	4 cut(s)	234, 544, 1332, 2564
BccI	CCATC	6 cut(s)	257, 295, 1971, 2527, 2594, 2981
BceAI	ACGGC	5 cut(s)	796, 827, 1565, 1619, 2808
BcgI	CGANNNNNNTGC	4 cut(s)	21, 55, 1142, 1176
BciT130I	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2207
BciVI	GTATCC	2 cut(s)	256, 863
BcnI	CCSGG	1 cut(s)	2530
BcoDI	GTCTC	4 cut(s)	581, 1411, 2227, 2399
BfaI	CTAG	3 cut(s)	482, 1820, 2424
BfmI	CTRYAG	1 cut(s)	440
BfoI	RGCGCY	1 cut(s)	455
BfuAI	ACCTGC	1 cut(s)	1838
BfuI	GTATCC	2 cut(s)	256, 863
BisI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2578
BlsI	GCNGC	6 cut(s)	155, 224, 559, 900, 1347, 2579
BmcAI	AGTACT	1 cut(s)	2524
Bme1390I	CCNGG	8 cut(s)	85, 545, 736, 867, 1020, 1255, 2207, 2530
Bme18I	GGWCC	1 cut(s)	2902
BmeRI	GACNNNNNGTC	1 cut(s)	1050
BmeT110I	CYCGRG	2 cut(s)	563, 1151
BmgT120I	GGNCC	5 cut(s)	1578, 1632, 1686, 1743, 2902
BmrFI	CCNGG	8 cut(s)	85, 545, 736, 867, 1020, 1255, 2207, 2530
BmrI	ACTGGG	3 cut(s)	1147, 2050, 2853
BmsI	GCATC	6 cut(s)	229, 343, 544, 2156, 2179, 2589
BmtI	GCTAGC	1 cut(s)	485
BmuI	ACTGGG	3 cut(s)	1147, 2050, 2853
BpiI	GAAGAC	3 cut(s)	1617, 1671, 2043
BpmI	CTGGAG	2 cut(s)	67, 1055
Bpu10I	CCTNAGC	4 cut(s)	708, 1203, 1815, 2700
BpuEI	CTTGAG	1 cut(s)	740
BpuMI	CCSGG	1 cut(s)	2530
Bsa29I	ATCGAT	1 cut(s)	72
BsaAI	YACGTR	1 cut(s)	2324
BsaBI	GATNNNNATC	2 cut(s)	1463, 2094
BsaHI	GRCGYC	1 cut(s)	201
BsaI	GGTCTC	1 cut(s)	581
BsaJI	CCNNGG	5 cut(s)	137, 562, 734, 735, 2799
BsaWI	WCCGGW	5 cut(s)	159, 196, 298, 1121, 2265
BsaXI	ACNNNNNCTCC	6 cut(s)	82, 112, 901, 931, 2595, 2625
Bsc4I	CCNNNNNNNGG	7 cut(s)	166, 634, 635, 866, 1156, 2429, 2881
Bse118I	RCCGGY	1 cut(s)	2265
Bse1I	ACTGG	8 cut(s)	374, 799, 1038, 1142, 2045, 2067, 2541, 2859
Bse21I	CCTNAGG	1 cut(s)	1305
Bse3DI	GCAATG	3 cut(s)	790, 2199, 2574
Bse8I	GATNNNNATC	2 cut(s)	1463, 2094
BseAI	TCCGGA	3 cut(s)	196, 298, 1121
BseBI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2207
BseCI	ATCGAT	1 cut(s)	72
BseDI	CCNNGG	5 cut(s)	137, 562, 734, 735, 2799
BseJI	GATNNNNATC	2 cut(s)	1463, 2094
BseLI	CCNNNNNNNGG	7 cut(s)	166, 634, 635, 866, 1156, 2429, 2881
BseMI	GCAATG	3 cut(s)	790, 2199, 2574
BseMII	CTCAG	8 cut(s)	267, 699, 1194, 1296, 1701, 1866, 2675, 2691
BseNI	ACTGG	8 cut(s)	374, 799, 1038, 1142, 2045, 2067, 2541, 2859
BseRI	GAGGAG	3 cut(s)	103, 840, 1400
BseXI	GCAGC	4 cut(s)	234, 544, 1332, 2564
BseYI	CCCAGC	3 cut(s)	628, 724, 2678
BsgI	GTGCAG	2 cut(s)	321, 1187
Bsh1236I	CGCG	2 cut(s)	103, 2402
Bsh1285I	CGRYCG	1 cut(s)	583
BshNI	GGYRCC	2 cut(s)	1798, 2546
BshTI	ACCGGT	1 cut(s)	2265
BshVI	ATCGAT	1 cut(s)	72
BsiEI	CGRYCG	1 cut(s)	583
BsiHKAI	GWGCWC	3 cut(s)	963, 1392, 2508
BsiHKCI	CYCGRG	2 cut(s)	563, 1151
BsiSI	CCGG	6 cut(s)	160, 197, 299, 1122, 2266, 2529
BslFI	GGGAC	2 cut(s)	2605, 2915
BslI	CCNNNNNNNGG	7 cut(s)	166, 634, 635, 866, 1156, 2429, 2881
BsmAI	GTCTC	4 cut(s)	581, 1411, 2227, 2399
BsmFI	GGGAC	2 cut(s)	2605, 2915
BsmI	GAATGC	4 cut(s)	379, 1197, 2217, 2876
Bso31I	GGTCTC	1 cut(s)	581
BsoBI	CYCGRG	2 cut(s)	563, 1151
Bsp1286I	GDGCHC	3 cut(s)	963, 1392, 2508
Bsp13I	TCCGGA	3 cut(s)	196, 298, 1121
Bsp1407I	TGTACA	1 cut(s)	2362
BspACI	CCGC	7 cut(s)	5, 103, 154, 898, 1984, 2084, 2402
BspCNI	CTCAG	8 cut(s)	268, 700, 1195, 1297, 1702, 1867, 2676, 2692
BspDI	ATCGAT	1 cut(s)	72
BspEI	TCCGGA	3 cut(s)	196, 298, 1121
BspFNI	CGCG	2 cut(s)	103, 2402
BspHI	TCATGA	3 cut(s)	2221, 2416, 2668
BspMI	ACCTGC	1 cut(s)	1838
BspOI	GCTAGC	1 cut(s)	485
BspT107I	GGYRCC	2 cut(s)	1798, 2546
BspTNI	GGTCTC	1 cut(s)	581
BsrDI	GCAATG	3 cut(s)	790, 2199, 2574
BsrFI	RCCGGY	1 cut(s)	2265
BsrGI	TGTACA	1 cut(s)	2362
BsrI	ACTGG	8 cut(s)	374, 799, 1038, 1142, 2045, 2067, 2541, 2859
BssAI	RCCGGY	1 cut(s)	2265
BssECI	CCNNGG	5 cut(s)	137, 562, 734, 735, 2799
BssNI	GRCGYC	1 cut(s)	201
BssT1I	CCWWGG	1 cut(s)	2799
Bst2UI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2207
Bst4CI	ACNGT	8 cut(s)	124, 535, 692, 1276, 1297, 2079, 2410, 3024
Bst6I	CTCTTC	2 cut(s)	1137, 2619
BstACI	GRCGYC	1 cut(s)	201
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstAUI	TGTACA	1 cut(s)	2362
BstBAI	YACGTR	1 cut(s)	2324
BstC8I	GCNNGC	9 cut(s)	114, 414, 483, 487, 512, 588, 1488, 2118, 2944
BstENI	CCTNNNNNAGG	1 cut(s)	2427
BstFNI	CGCG	2 cut(s)	103, 2402
BstH2I	RGCGCY	1 cut(s)	455
BstHHI	GCGC	6 cut(s)	358, 454, 491, 1600, 1654, 2217
BstMAI	GTCTC	4 cut(s)	581, 1411, 2227, 2399
BstMCI	CGRYCG	1 cut(s)	583
BstMWI	GCNNNNNNNGC	7 cut(s)	109, 329, 409, 977, 1345, 1496, 2512
BstNI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2207
BstNSI	RCATGY	3 cut(s)	407, 975, 1361
BstSCI	CCNGG	8 cut(s)	83, 543, 734, 865, 1018, 1253, 2205, 2528
BstSFI	CTRYAG	1 cut(s)	440
BstUI	CGCG	2 cut(s)	103, 2402
BstV1I	GCAGC	4 cut(s)	234, 544, 1332, 2564
BstV2I	GAAGAC	3 cut(s)	1617, 1671, 2043
BstX2I	RGATCY	5 cut(s)	193, 1118, 1980, 2095, 2795
BstXI	CCANNNNNNTGG	1 cut(s)	1977
BstYI	RGATCY	5 cut(s)	193, 1118, 1980, 2095, 2795
Bsu15I	ATCGAT	1 cut(s)	72
Bsu36I	CCTNAGG	1 cut(s)	1305
BsuI	GTATCC	2 cut(s)	256, 863
BsuTUI	ATCGAT	1 cut(s)	72
BtgZI	GCGATG	2 cut(s)	235, 1038
BtsI	GCAGTG	2 cut(s)	1170, 2968
BtsIMutI	CAGTG	6 cut(s)	1031, 1170, 1542, 2479, 2548, 2968
BveI	ACCTGC	1 cut(s)	1838
Cac8I	GCNNGC	9 cut(s)	114, 414, 483, 487, 512, 588, 1488, 2118, 2944
CaiI	CAGNNNCTG	2 cut(s)	557, 1345
CciI	TCATGA	3 cut(s)	2221, 2416, 2668
CfoI	GCGC	6 cut(s)	358, 454, 491, 1600, 1654, 2217
Cfr10I	RCCGGY	1 cut(s)	2265
Cfr13I	GGNCC	5 cut(s)	1578, 1632, 1686, 1743, 2902
ClaI	ATCGAT	1 cut(s)	72
CseI	GACGC	1 cut(s)	334
Csp6I	GTAC	8 cut(s)	652, 1010, 1419, 2269, 2363, 2456, 2523, 2773
CspAI	ACCGGT	1 cut(s)	2265
CviQI	GTAC	8 cut(s)	652, 1010, 1419, 2269, 2363, 2456, 2523, 2773
DraI	TTTAAA	1 cut(s)	670
DrdI	GACNNNNNNGTC	1 cut(s)	2923
DriI	GACNNNNNGTC	1 cut(s)	1050
DseDI	GACNNNNNNGTC	1 cut(s)	2923
EaeI	YGGCCR	2 cut(s)	2064, 2821
Eam1104I	CTCTTC	2 cut(s)	1137, 2619
Eam1105I	GACNNNNNGTC	1 cut(s)	1050
EarI	CTCTTC	2 cut(s)	1137, 2619
Ecl136II	GAGCTC	2 cut(s)	1390, 2506
Eco130I	CCWWGG	1 cut(s)	2799
Eco147I	AGGCCT	2 cut(s)	323, 1253
Eco24I	GRGCYC	2 cut(s)	1392, 2508
Eco31I	GGTCTC	1 cut(s)	581
Eco32I	GATATC	1 cut(s)	2203
Eco47I	GGWCC	1 cut(s)	2902
Eco47III	AGCGCT	1 cut(s)	453
Eco53kI	GAGCTC	2 cut(s)	1390, 2506
Eco57I	CTGAAG	4 cut(s)	79, 1076, 1472, 2682
Eco72I	CACGTG	1 cut(s)	2324
Eco81I	CCTNAGG	1 cut(s)	1305
Eco88I	CYCGRG	2 cut(s)	563, 1151
EcoICRI	GAGCTC	2 cut(s)	1390, 2506
EcoNI	CCTNNNNNAGG	1 cut(s)	2427
EcoRII	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2205
EcoRV	GATATC	1 cut(s)	2203
EcoT14I	CCWWGG	1 cut(s)	2799
EcoT38I	GRGCYC	2 cut(s)	1392, 2508
ErhI	CCWWGG	1 cut(s)	2799
FalI	AAGNNNNNCTT	4 cut(s)	311, 343, 2435, 2467
FaqI	GGGAC	2 cut(s)	2605, 2915
FauNDI	CATATG	3 cut(s)	493, 1495, 2996
Fnu4HI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2578
FriOI	GRGCYC	2 cut(s)	1392, 2508
Fsp4HI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2578
FspBI	CTAG	3 cut(s)	482, 1820, 2424
FspI	TGCGCA	2 cut(s)	1599, 1653
GlaI	GCGC	6 cut(s)	357, 453, 490, 1599, 1653, 2216
GluI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2578
GsaI	CCCAGC	3 cut(s)	632, 728, 2682
GsuI	CTGGAG	2 cut(s)	67, 1055
HaeII	RGCGCY	1 cut(s)	455
HapII	CCGG	6 cut(s)	160, 197, 299, 1122, 2266, 2529
HgaI	GACGC	1 cut(s)	334
HhaI	GCGC	6 cut(s)	358, 454, 491, 1600, 1654, 2217
Hin1I	GRCGYC	1 cut(s)	201
Hin6I	GCGC	6 cut(s)	356, 452, 489, 1598, 1652, 2215
HinP1I	GCGC	6 cut(s)	356, 452, 489, 1598, 1652, 2215
HincII	GTYRAC	3 cut(s)	367, 909, 2182
HindII	GTYRAC	3 cut(s)	367, 909, 2182
HindIII	AAGCTT	2 cut(s)	512, 978
HpaI	GTTAAC	1 cut(s)	367
HpaII	CCGG	6 cut(s)	160, 197, 299, 1122, 2266, 2529
HphI	GGTGA	4 cut(s)	136, 169, 2221, 2444
Hpy166II	GTNNAC	6 cut(s)	282, 367, 909, 1135, 2182, 2263
Hpy188I	TCNGA	9 cut(s)	138, 150, 802, 925, 1056, 1411, 2339, 2633, 2795
Hpy8I	GTNNAC	6 cut(s)	282, 367, 909, 1135, 2182, 2263
Hpy99I	CGWCG	1 cut(s)	206
HpyAV	CCTTC	7 cut(s)	1150, 1225, 1240, 1447, 2798, 2807, 2875
HpyCH4III	ACNGT	8 cut(s)	124, 535, 692, 1276, 1297, 2079, 2410, 3024
HpyCH4IV	ACGT	6 cut(s)	183, 201, 1105, 1131, 2323, 2357
HpyF10VI	GCNNNNNNNGC	7 cut(s)	109, 329, 409, 977, 1345, 1496, 2512
HpySE526I	ACGT	6 cut(s)	183, 201, 1105, 1131, 2323, 2357
Hsp92I	GRCGYC	1 cut(s)	201
HspAI	GCGC	6 cut(s)	356, 452, 489, 1598, 1652, 2215
Kpn2I	TCCGGA	3 cut(s)	196, 298, 1121
KspAI	GTTAAC	1 cut(s)	367
Lsp1109I	GCAGC	4 cut(s)	234, 544, 1332, 2564
LweI	GCATC	6 cut(s)	229, 343, 544, 2156, 2179, 2589
MaeI	CTAG	3 cut(s)	482, 1820, 2424
MaeII	ACGT	6 cut(s)	183, 201, 1105, 1131, 2323, 2357
MaeIII	GTNAC	6 cut(s)	175, 1963, 2070, 2749, 2861, 2963
MflI	RGATCY	5 cut(s)	193, 1118, 1980, 2095, 2795
MhlI	GDGCHC	3 cut(s)	963, 1392, 2508
MlyI	GAGTC	6 cut(s)	47, 136, 1022, 1607, 1661, 2587
MmeI	TCCRAC	2 cut(s)	1211, 2611
MroI	TCCGGA	3 cut(s)	196, 298, 1121
MslI	CAYNNNNRTG	1 cut(s)	2982
MspI	CCGG	6 cut(s)	160, 197, 299, 1122, 2266, 2529
MspR9I	CCNGG	8 cut(s)	85, 545, 736, 867, 1020, 1255, 2207, 2530
Mva1269I	GAATGC	4 cut(s)	379, 1197, 2217, 2876
MvaI	CCWGG	7 cut(s)	85, 545, 736, 867, 1020, 1255, 2207
MvnI	CGCG	2 cut(s)	103, 2402
MwoI	GCNNNNNNNGC	7 cut(s)	109, 329, 409, 977, 1345, 1496, 2512
NciI	CCSGG	1 cut(s)	2530
NdeI	CATATG	3 cut(s)	493, 1495, 2996
NheI	GCTAGC	1 cut(s)	481
NmeAIII	GCCGAG	1 cut(s)	2092
NmuCI	GTSAC	4 cut(s)	175, 1963, 2749, 2963
NsbI	TGCGCA	2 cut(s)	1599, 1653
NspI	RCATGY	3 cut(s)	407, 975, 1361
PagI	TCATGA	3 cut(s)	2221, 2416, 2668
PaqCI	CACCTGC	1 cut(s)	1838
PasI	CCCWGGG	1 cut(s)	735
PceI	AGGCCT	2 cut(s)	323, 1253
PciI	ACATGT	1 cut(s)	1357
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PctI	GAATGC	4 cut(s)	379, 1197, 2217, 2876
PfeI	GAWTC	4 cut(s)	133, 605, 1464, 1559
PflFI	GACNNNGTC	1 cut(s)	2042
PfoI	TCCNGGA	1 cut(s)	83
PinAI	ACCGGT	1 cut(s)	2265
PkrI	GCNGC	6 cut(s)	155, 224, 559, 900, 1347, 2579
PleI	GAGTC	6 cut(s)	46, 136, 1022, 1607, 1661, 2587
PmaCI	CACGTG	1 cut(s)	2324
PmlI	CACGTG	1 cut(s)	2324
PpsI	GAGTC	6 cut(s)	46, 136, 1022, 1607, 1661, 2587
Ppu21I	YACGTR	1 cut(s)	2324
PscI	ACATGT	1 cut(s)	1357
PshBI	ATTAAT	1 cut(s)	2489
PsiI	TTATAA	2 cut(s)	1923, 2466
Psp124BI	GAGCTC	2 cut(s)	1392, 2508
Psp6I	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2205
PspCI	CACGTG	1 cut(s)	2324
PspFI	CCCAGC	3 cut(s)	628, 724, 2678
PspGI	CCWGG	7 cut(s)	83, 543, 734, 865, 1018, 1253, 2205
PspPI	GGNCC	5 cut(s)	1578, 1632, 1686, 1743, 2902
PstNI	CAGNNNCTG	2 cut(s)	557, 1345
PsuI	RGATCY	5 cut(s)	193, 1118, 1980, 2095, 2795
PsyI	GACNNNGTC	1 cut(s)	2042
RsaI	GTAC	8 cut(s)	653, 1011, 1420, 2270, 2364, 2457, 2524, 2774
RsaNI	GTAC	8 cut(s)	652, 1010, 1419, 2269, 2363, 2456, 2523, 2773
RseI	CAYNNNNRTG	1 cut(s)	2982
SacI	GAGCTC	2 cut(s)	1392, 2508
SatI	GCNGC	6 cut(s)	154, 223, 558, 899, 1346, 2578
Sau96I	GGNCC	5 cut(s)	1578, 1632, 1686, 1743, 2902
ScaI	AGTACT	1 cut(s)	2524
SchI	GAGTC	6 cut(s)	47, 136, 1022, 1607, 1661, 2587
ScrFI	CCNGG	8 cut(s)	85, 545, 736, 867, 1020, 1255, 2207, 2530
SduI	GDGCHC	3 cut(s)	963, 1392, 2508
SfaNI	GCATC	6 cut(s)	229, 343, 544, 2156, 2179, 2589
SfcI	CTRYAG	1 cut(s)	440
SinI	GGWCC	1 cut(s)	2902
SmiMI	CAYNNNNRTG	1 cut(s)	2982
SmlI	CTYRAG	1 cut(s)	719
SmoI	CTYRAG	1 cut(s)	719
SseBI	AGGCCT	2 cut(s)	323, 1253
SsiI	CCGC	7 cut(s)	5, 103, 154, 898, 1984, 2084, 2402
SspI	AATATT	4 cut(s)	389, 1261, 2011, 2248
SspMI	CTAG	3 cut(s)	482, 1820, 2424
SstI	GAGCTC	2 cut(s)	1392, 2508
StuI	AGGCCT	2 cut(s)	323, 1253
StyD4I	CCNGG	8 cut(s)	83, 543, 734, 865, 1018, 1253, 2205, 2528
StyI	CCWWGG	1 cut(s)	2799
TaaI	ACNGT	8 cut(s)	124, 535, 692, 1276, 1297, 2079, 2410, 3024
TaiI	ACGT	6 cut(s)	186, 204, 1108, 1134, 2326, 2360
TaqI	TCGA	4 cut(s)	62, 72, 1354, 3015
TaqII	GACCGA	1 cut(s)	569
TatI	WGTACW	3 cut(s)	1009, 2362, 2522
TauI	GCSGC	2 cut(s)	156, 901
TfiI	GAWTC	4 cut(s)	133, 605, 1464, 1559
TscAI	CASTG	6 cut(s)	1038, 1170, 1549, 2479, 2548, 2968
TseFI	GTSAC	4 cut(s)	175, 1963, 2749, 2963
TseI	GCWGC	4 cut(s)	222, 557, 1345, 2577
Tsp45I	GTSAC	4 cut(s)	175, 1963, 2749, 2963
TspGWI	ACGGA	4 cut(s)	338, 819, 909, 1519
TspRI	CASTG	6 cut(s)	1038, 1170, 1549, 2479, 2548, 2968
Tth111I	GACNNNGTC	1 cut(s)	2042
VpaK11BI	GGWCC	1 cut(s)	2902
VspI	ATTAAT	1 cut(s)	2489
XagI	CCTNNNNNAGG	1 cut(s)	2427
XapI	RAATTY	4 cut(s)	127, 434, 773, 2744
XceI	RCATGY	3 cut(s)	407, 975, 1361
XspI	CTAG	3 cut(s)	482, 1820, 2424
ZraI	GACGTC	1 cut(s)	202
ZrmI	AGTACT	1 cut(s)	2524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.