Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Reverse (-)

35877712 .. 35885592

Gene Structure 7881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g47260.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3078 bp

ATGGCGGTGTCGCAATTCTCTTGCGGCGGAGCAATGGAGTCGCTGCACTACAAATCGCAGTCGGAATTGATCGGTTTCGGCTCCCGGAGGAGCTTCAGTTCGCGGTTGTTGCTGGCGAGGACGTTGAGTTTGAATCCGAGGACTCACCGGAGCCGCTGCCGGAGGTCGGTTCTGGTCACCAACGTCATCAAGGATCCGACCGTCGAGCAAGAAACTACACTCAGCTCATGCACACCTGATGCTGTATCTATTGCTTCAAGTATCAAGTACCATGCTGAGTTTACGCCGTCGTTTTCTCCGGAGCACTTTGAGCTTCCAAAGGCCTATTTTGCAACTGCGCAGAGTGTCCGTGATGCGCTTATTGTTAACTGGAATGCAACGAATGATTATTATGAAAAGTTGAATGTAAAGCAGGCGTATTATTTGTCAATGGAATTTCTACAGGGTAGAGCACTGTTGAATGCAGTTGGTAATTTGGAGCTAGCAGGTGCATATGCGGAGGCTTTAAGCAAGCTCGGACACAAATTAGAAACCGTGGCTCACCAGGAGCCAGATGCTGCGCTTGGGAATGGGGGTCTCGGTCGGCTTGCCTCATGCTTCTTGGATTCTTTGGCAACTTTGAACTATCCAGCATGGGGTTATGGACTTAGGTACAAGTATGGGCTGTTTAAACAGCGAATTACCAAAGAGGGTCAAGAAGAAGCAGCCGAGGATTGGCTTGAGATGGGAAATCCCTGGGAGATTTTGAGGAATGATGTTTCATATCATGTAAAATTCTATGGCAATGTTGCTACTGGATCAGATGGAAAACGGCATTGGATTGGAGGAGAAGATGTAGTGGCTGTTGCTTATGATGTTCCAATACCAGGATATAAAACTAAAACGACTATCAACTTGAGGCTATGGTCAACCAAAGCTCTGTCACAGGACTTTGATTTATATTCTTTTAATTCTGGGGAGCACACGAAAGCATTTGAAGCTTTAGCAAATGCCGAAAAGATTTGCTATGTACTTTATCCTGGCGATGACTCACTGGAGGGCAAGACACTTCGTCTGAAGCAACAATATACTTTATGTTCTGCTTCTCTCCAAGATATTGTTGCACGTTTTGAGAGAAGATCCGGAGCAAACGTAAATTGGGAAGAGTTCCCCAAGAAGGTTGCAGTGCAGATGAATGACACTCATCCAACTCTCTGCATTCCTGAACTGATTAGGATTTTAATGGATTTAAAGGGTTTGACTTGGAAGGAGGCCTGGAGTATTACTCAAAGAACGGTCGCATATACAAACCATACTGTTCTACCTGAGGCATTGGAGAAATGGAGTTTGGAACTTATGCAGAAACTGCTTCCTCGACATGTGGAGATCATAGAACTCATAGACGAGGAGCTCATTAACACAATAGTGTCGGAGTATGGCACATCAGATTGTGATTTATTAGAAAAGAAACTGAAGGAGATGAGAATTCTAGAAAATGTTGATTTGCCTCCTACTTATGCGAAGTTATTGTTTCAACCCAAAAAAGGCTCCAGTGTTCTTCCCACTGAAAAACTTGAAGATTCAAACAAGGATGAAAAACTTGAAGATTCAAACAAGGATGAAAAACTTGAAGATTCAGAAAAGGATGAAAAACTTGAAGATTCAAACAAGGATGAAAAACTTGAAGATTCAGAAAAGGATGAAAAACTTGAAGATTCAAACAAGGATGAAAAACTTGAAGATTCAAACAAGGATGAAAAACTTGAAGATTCAGAAAAGGATGAAAAACTTGAAGATTCAAAAAAGGATGTCAAAGCTCTTGATGAAGAAATTGAGCCTAAGAAGAAGCCCTTAGAGGAAAAGAAAAAGGCATCTCCGAAACCACCTAAGCTAGTTCGTATGGCAAATCTCTGTGTTGTAGGTGGTCATGCAGTAAATGGTGTTGCTGAGATACATAGTGAAATAGTCAAGGACGAAGTATTCAATTCATTTTATAAATTGTGGCCTAAGAAGTTTCAAAACAAAACAAATGGAGTGACACCAAGAAGATGGATCCGCTTCTGCAATCCAGACTTGAGCAGTATTTTAACCAAATGGATAGGCACAGAAGACTGGGTCTTAAACACTGAAAAACTGGCCGAATTACGACAGTATGCGGATGATGGGGATCTCCAAACTCAGTGGAGGCAAGCAAAAAGGAGCAACAAATTGAGAGTTGTGTCATTCATCAAAGAAAGAACAGGGTATTCTGTCAGCCCTGATGCAATGTTCGATATCCAGGTGAAGCGCATTCATGAATACAAGAGACAACTTATGAATATCCTGGGAATTGTTTACCGCTACAAGAAAATGAAAGAAATGAGTGCTTCAAAAAGGAAAGCAGAGTTTGTTCCACGTGTTTGTATGTTTGGAGGAAAAGCATTTGCGACGTATGTACAGGCCAAGAGAATTGTGAAGTTTATCACAGATGTCGGCGAGACTGTAAATCATGATCCTAGTATAGGGGATCTACTAAAGGTTATCTTTGTACCTGATTATAATGTCAGTGTCGCTGAACTATTAATTCCTGCAAGTGAGCTCTCACAGCACATCAGTACTGCCGGAATGGAGGCCAGTGGAACAAGCAACATGAAGTTTGCAATGAATGGCTGCATCCTAATTGGTACTCTGGATGGAGCCAATGTCGAAATAAGAGAAGAGGTTGGAGCAGATAACTTTTTCCTTTTTGGTGCTGAAGCTCATGAGATTGCTGGTCTCAGAAAGGAACGAGCTGAGGGCAAGTTTGTGCCAGACCCCCGTTTTGAAGAAGTTAAGGAATTTATCAGAAGTGGTGTTTTTGGGTCATACAATTATGATGACCTGATCGGATCCTTGGAAGGAAATGAAGGATTTGGCCGGGCTGATTACTTCCTTGTTGGCAAAGACTTCCCCAGTTACATAGAATGCCAAGAGAAAGTTGATGAAGCGTATCGGGACCAAAAGAAATGGACAAAAATGTCAATCCTGAACACAGCAGGCTCATCCAAGTTTAGCAGCGACAGAACCATTCATGAATATGCTAAAGACATATGGAACATCAACCCTGTCGAATTACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0001101 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009266 GO:0009414 GO:0009415 GO:0009501 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009987 GO:0010035 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048037 GO:0050662 GO:0050896 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

1026

Amino Acids

116.37

Weight (kDa)

5.62

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	170 - 491	8.8e-128	Carbohydrate phosphorylase
Phosphorylase	PF00343	615 - 987	5.2e-147	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1974, 2517
AarI	CACCTGC	1 cut(s)	476
AasI	GACNNNNNNGTC	1 cut(s)	2974
Acc16I	TGCGCA	1 cut(s)	339
Acc36I	ACCTGC	1 cut(s)	476
AccII	CGCG	1 cut(s)	103
AccIII	TCCGGA	2 cut(s)	298, 1121
AciI	CCGC	9 cut(s)	5, 24, 27, 103, 154, 497, 2035, 2135, 2317
AcoI	YGGCCR	2 cut(s)	2115, 2872
AcsI	RAATTY	4 cut(s)	434, 773, 1464, 2795
AcuI	CTGAAG	4 cut(s)	79, 1076, 1472, 2733
AcvI	CACGTG	1 cut(s)	2375
AfaI	GTAC	7 cut(s)	269, 653, 1011, 2415, 2508, 2575, 2644
AfiI	CCNNNNNNNGG	7 cut(s)	166, 635, 714, 866, 1156, 1523, 2480
AflIII	ACRYGT	2 cut(s)	1357, 2374
AhdI	GACNNNNNGTC	1 cut(s)	1050
AjnI	CCWGG	7 cut(s)	543, 734, 865, 1018, 1253, 2256, 2301
AjuI	GAANNNNNNNTTGG	4 cut(s)	799, 831, 1310, 1342
AleI	CACNNNNGTG	1 cut(s)	1403
AloI	GAACNNNNNNTCC	2 cut(s)	82, 114
Alw21I	GWGCWC	5 cut(s)	306, 454, 963, 1392, 2559
Alw26I	GTCTC	4 cut(s)	581, 2278, 2450, 2738
AlwNI	CAGNNNCTG	2 cut(s)	557, 1345
Aor13HI	TCCGGA	2 cut(s)	298, 1121
AoxI	GGCC	7 cut(s)	321, 1251, 1982, 2115, 2418, 2589, 2872
ApeKI	GCWGC	6 cut(s)	43, 156, 557, 704, 2628, 3012
ApoI	RAATTY	4 cut(s)	434, 773, 1464, 2795
ArsI	GACNNNNNNTTYG	4 cut(s)	112, 144, 2762, 2794
AseI	ATTAAT	1 cut(s)	2540
AspLEI	GCGC	4 cut(s)	340, 358, 562, 2268
AspS9I	GGNCC	1 cut(s)	2953
AsuC2I	CCSGG	2 cut(s)	85, 2876
AsuHPI	GGTGA	4 cut(s)	137, 169, 533, 2272
AsuNHI	GCTAGC	1 cut(s)	481
AvaII	GGWCC	1 cut(s)	2953
AxyI	CCTNAGG	1 cut(s)	1305
BamHI	GGATCC	3 cut(s)	193, 2031, 2846
BanII	GRGCYC	2 cut(s)	1392, 2559
BbrPI	CACGTG	1 cut(s)	2375
BbsI	GAAGAC	1 cut(s)	2094
Bbv12I	GWGCWC	5 cut(s)	306, 454, 963, 1392, 2559
BbvCI	CCTCAGC	1 cut(s)	2751
BbvI	GCAGC	6 cut(s)	30, 143, 544, 716, 2615, 3024
BccI	CCATC	5 cut(s)	718, 797, 2022, 2135, 2645
BceAI	ACGGC	2 cut(s)	271, 827
BcgI	CGANNNNNNTGC	2 cut(s)	21, 55
BciT130I	CCWGG	7 cut(s)	545, 736, 867, 1020, 1255, 2258, 2303
BcnI	CCSGG	2 cut(s)	85, 2876
BcoDI	GTCTC	4 cut(s)	581, 2278, 2450, 2738
BfaI	CTAG	4 cut(s)	482, 1469, 1871, 2475
BfmI	CTRYAG	1 cut(s)	440
BfuAI	ACCTGC	1 cut(s)	476
BisI	GCNGC	8 cut(s)	25, 44, 154, 157, 558, 705, 2629, 3013
BlsI	GCNGC	8 cut(s)	26, 45, 155, 158, 559, 706, 2630, 3014
BmcAI	AGTACT	1 cut(s)	2575
Bme1390I	CCNGG	9 cut(s)	85, 545, 736, 867, 1020, 1255, 2258, 2303, 2876
Bme18I	GGWCC	1 cut(s)	2953
BmeRI	GACNNNNNGTC	1 cut(s)	1050
BmgT120I	GGNCC	1 cut(s)	2953
BmiI	GGNNCC	9 cut(s)	82, 152, 195, 549, 1528, 2033, 2656, 2848, 2954
BmrFI	CCNGG	9 cut(s)	85, 545, 736, 867, 1020, 1255, 2258, 2303, 2876
BmrI	ACTGGG	2 cut(s)	2101, 2904
BmsI	GCATC	6 cut(s)	229, 343, 544, 1859, 2230, 2640
BmtI	GCTAGC	1 cut(s)	485
BmuI	ACTGGG	2 cut(s)	2101, 2904
BpiI	GAAGAC	1 cut(s)	2094
BplI	GAGNNNNNCTC	2 cut(s)	1249, 1281
BpmI	CTGGAG	3 cut(s)	1055, 1276, 1513
Bpu10I	CCTNAGC	2 cut(s)	1866, 2751
BpuEI	CTTGAG	3 cut(s)	740, 916, 2074
BpuMI	CCSGG	2 cut(s)	85, 2876
BsaAI	YACGTR	1 cut(s)	2375
BsaBI	GATNNNNATC	1 cut(s)	2145
BsaI	GGTCTC	2 cut(s)	581, 2738
BsaJI	CCNNGG	7 cut(s)	137, 534, 708, 734, 735, 2302, 2850
BsaWI	WCCGGW	3 cut(s)	147, 298, 1121
BsaXI	ACNNNNNCTCC	8 cut(s)	82, 112, 819, 849, 1116, 1146, 2646, 2676
Bsc4I	CCNNNNNNNGG	7 cut(s)	166, 635, 714, 866, 1156, 1523, 2480
Bse1I	ACTGG	8 cut(s)	374, 799, 1038, 1530, 2096, 2118, 2592, 2910
Bse21I	CCTNAGG	1 cut(s)	1305
Bse3DI	GCAATG	4 cut(s)	39, 790, 2250, 2625
Bse8I	GATNNNNATC	1 cut(s)	2145
BseAI	TCCGGA	2 cut(s)	298, 1121
BseBI	CCWGG	7 cut(s)	545, 736, 867, 1020, 1255, 2258, 2303
BseDI	CCNNGG	7 cut(s)	137, 534, 708, 734, 735, 2302, 2850
BseJI	GATNNNNATC	1 cut(s)	2145
BseLI	CCNNNNNNNGG	7 cut(s)	166, 635, 714, 866, 1156, 1523, 2480
BseMI	GCAATG	4 cut(s)	39, 790, 2250, 2625
BseMII	CTCAG	7 cut(s)	235, 267, 1296, 1917, 2171, 2742, 2749
BseNI	ACTGG	8 cut(s)	374, 799, 1038, 1530, 2096, 2118, 2592, 2910
BseRI	GAGGAG	3 cut(s)	103, 840, 1400
BseXI	GCAGC	6 cut(s)	30, 143, 544, 716, 2615, 3024
BsgI	GTGCAG	2 cut(s)	29, 1187
Bsh1236I	CGCG	1 cut(s)	103
Bsh1285I	CGRYCG	3 cut(s)	201, 583, 1278
BshFI	GGCC	7 cut(s)	323, 1253, 1984, 2117, 2420, 2591, 2874
BsiEI	CGRYCG	3 cut(s)	201, 583, 1278
BsiHKAI	GWGCWC	5 cut(s)	306, 454, 963, 1392, 2559
BsiSI	CCGG	7 cut(s)	85, 148, 160, 299, 1122, 2580, 2875
BslFI	GGGAC	1 cut(s)	2966
BslI	CCNNNNNNNGG	7 cut(s)	166, 635, 714, 866, 1156, 1523, 2480
BsmAI	GTCTC	4 cut(s)	581, 2278, 2450, 2738
BsmFI	GGGAC	1 cut(s)	2966
BsmI	GAATGC	5 cut(s)	379, 466, 1197, 2268, 2927
BsnI	GGCC	7 cut(s)	323, 1253, 1984, 2117, 2420, 2591, 2874
Bso31I	GGTCTC	2 cut(s)	581, 2738
Bsp1286I	GDGCHC	5 cut(s)	306, 454, 963, 1392, 2559
Bsp13I	TCCGGA	2 cut(s)	298, 1121
Bsp1407I	TGTACA	1 cut(s)	2413
BspACI	CCGC	9 cut(s)	5, 24, 27, 103, 154, 497, 2035, 2135, 2317
BspANI	GGCC	7 cut(s)	323, 1253, 1984, 2117, 2420, 2591, 2874
BspCNI	CTCAG	7 cut(s)	234, 268, 1297, 1918, 2170, 2743, 2748
BspEI	TCCGGA	2 cut(s)	298, 1121
BspFNI	CGCG	1 cut(s)	103
BspHI	TCATGA	4 cut(s)	2272, 2467, 2719, 3028
BspLI	GGNNCC	9 cut(s)	82, 152, 195, 549, 1528, 2033, 2656, 2848, 2954
BspMI	ACCTGC	1 cut(s)	476
BspOI	GCTAGC	1 cut(s)	485
BspTNI	GGTCTC	2 cut(s)	581, 2738
BsrDI	GCAATG	4 cut(s)	39, 790, 2250, 2625
BsrGI	TGTACA	1 cut(s)	2413
BsrI	ACTGG	8 cut(s)	374, 799, 1038, 1530, 2096, 2118, 2592, 2910
BssECI	CCNNGG	7 cut(s)	137, 534, 708, 734, 735, 2302, 2850
BssT1I	CCWWGG	1 cut(s)	2850
Bst2UI	CCWGG	7 cut(s)	545, 736, 867, 1020, 1255, 2258, 2303
Bst4CI	ACNGT	8 cut(s)	202, 456, 535, 1276, 1297, 2130, 2461, 3075
Bst6I	CTCTTC	2 cut(s)	1137, 2670
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstAUI	TGTACA	1 cut(s)	2413
BstBAI	YACGTR	1 cut(s)	2375
BstC8I	GCNNGC	7 cut(s)	114, 414, 483, 512, 588, 2169, 2995
BstDSI	CCRYGG	1 cut(s)	534
BstEII	GGTNACC	1 cut(s)	175
BstENI	CCTNNNNNAGG	1 cut(s)	2478
BstFNI	CGCG	1 cut(s)	103
BstHHI	GCGC	4 cut(s)	340, 358, 562, 2268
BstMAI	GTCTC	4 cut(s)	581, 2278, 2450, 2738
BstMCI	CGRYCG	3 cut(s)	201, 583, 1278
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 310, 329, 977, 1345, 2563
BstNI	CCWGG	7 cut(s)	545, 736, 867, 1020, 1255, 2258, 2303
BstNSI	RCATGY	1 cut(s)	1361
BstPI	GGTNACC	1 cut(s)	175
BstSCI	CCNGG	9 cut(s)	83, 543, 734, 865, 1018, 1253, 2256, 2301, 2874
BstSFI	CTRYAG	1 cut(s)	440
BstUI	CGCG	1 cut(s)	103
BstV1I	GCAGC	6 cut(s)	30, 143, 544, 716, 2615, 3024
BstV2I	GAAGAC	1 cut(s)	2094
BstX2I	RGATCY	6 cut(s)	193, 1118, 2031, 2146, 2485, 2846
BstXI	CCANNNNNNTGG	1 cut(s)	2028
BstYI	RGATCY	6 cut(s)	193, 1118, 2031, 2146, 2485, 2846
Bsu36I	CCTNAGG	1 cut(s)	1305
BsuRI	GGCC	7 cut(s)	323, 1253, 1984, 2117, 2420, 2591, 2874
BtgI	CCRYGG	1 cut(s)	534
BtgZI	GCGATG	1 cut(s)	1038
BtsI	GCAGTG	1 cut(s)	1170
BtsIMutI	CAGTG	9 cut(s)	452, 1031, 1170, 1537, 1542, 2103, 2165, 2530, 2599
BveI	ACCTGC	1 cut(s)	476
Cac8I	GCNNGC	7 cut(s)	114, 414, 483, 512, 588, 2169, 2995
CaiI	CAGNNNCTG	2 cut(s)	557, 1345
CciI	TCATGA	4 cut(s)	2272, 2467, 2719, 3028
CfoI	GCGC	4 cut(s)	340, 358, 562, 2268
Cfr13I	GGNCC	1 cut(s)	2953
Csp6I	GTAC	7 cut(s)	268, 652, 1010, 2414, 2507, 2574, 2643
CspCI	CAANNNNNGTGG	2 cut(s)	2141, 2176
CviQI	GTAC	7 cut(s)	268, 652, 1010, 2414, 2507, 2574, 2643
DraI	TTTAAA	2 cut(s)	670, 1230
DrdI	GACNNNNNNGTC	1 cut(s)	2974
DriI	GACNNNNNGTC	1 cut(s)	1050
DseDI	GACNNNNNNGTC	1 cut(s)	2974
EaeI	YGGCCR	2 cut(s)	2115, 2872
Eam1104I	CTCTTC	2 cut(s)	1137, 2670
Eam1105I	GACNNNNNGTC	1 cut(s)	1050
EarI	CTCTTC	2 cut(s)	1137, 2670
EciI	GGCGGA	1 cut(s)	42
Ecl136II	GAGCTC	2 cut(s)	1390, 2557
Eco130I	CCWWGG	1 cut(s)	2850
Eco147I	AGGCCT	2 cut(s)	323, 1253
Eco24I	GRGCYC	2 cut(s)	1392, 2559
Eco31I	GGTCTC	2 cut(s)	581, 2738
Eco32I	GATATC	1 cut(s)	2254
Eco47I	GGWCC	1 cut(s)	2953
Eco53kI	GAGCTC	2 cut(s)	1390, 2557
Eco57I	CTGAAG	4 cut(s)	79, 1076, 1472, 2733
Eco72I	CACGTG	1 cut(s)	2375
Eco81I	CCTNAGG	1 cut(s)	1305
Eco91I	GGTNACC	1 cut(s)	175
EcoICRI	GAGCTC	2 cut(s)	1390, 2557
EcoNI	CCTNNNNNAGG	1 cut(s)	2478
EcoO65I	GGTNACC	1 cut(s)	175
EcoRI	GAATTC	1 cut(s)	1464
EcoRII	CCWGG	7 cut(s)	543, 734, 865, 1018, 1253, 2256, 2301
EcoRV	GATATC	1 cut(s)	2254
EcoT14I	CCWWGG	1 cut(s)	2850
EcoT38I	GRGCYC	2 cut(s)	1392, 2559
ErhI	CCWWGG	1 cut(s)	2850
FalI	AAGNNNNNCTT	4 cut(s)	1814, 1846, 2486, 2518
FaqI	GGGAC	1 cut(s)	2966
FauNDI	CATATG	2 cut(s)	493, 3047
Fnu4HI	GCNGC	8 cut(s)	25, 44, 154, 157, 558, 705, 2629, 3013
FriOI	GRGCYC	2 cut(s)	1392, 2559
Fsp4HI	GCNGC	8 cut(s)	25, 44, 154, 157, 558, 705, 2629, 3013
FspBI	CTAG	4 cut(s)	482, 1469, 1871, 2475
FspI	TGCGCA	1 cut(s)	339
GlaI	GCGC	4 cut(s)	339, 357, 561, 2267
GluI	GCNGC	8 cut(s)	25, 44, 154, 157, 558, 705, 2629, 3013
GsuI	CTGGAG	3 cut(s)	1055, 1276, 1513
HaeIII	GGCC	7 cut(s)	323, 1253, 1984, 2117, 2420, 2591, 2874
HapII	CCGG	7 cut(s)	85, 148, 160, 299, 1122, 2580, 2875
HhaI	GCGC	4 cut(s)	340, 358, 562, 2268
Hin6I	GCGC	4 cut(s)	338, 356, 560, 2266
HinP1I	GCGC	4 cut(s)	338, 356, 560, 2266
HincII	GTYRAC	2 cut(s)	367, 909
HindII	GTYRAC	2 cut(s)	367, 909
HindIII	AAGCTT	1 cut(s)	978
HpaI	GTTAAC	1 cut(s)	367
HpaII	CCGG	7 cut(s)	85, 148, 160, 299, 1122, 2580, 2875
HphI	GGTGA	4 cut(s)	137, 169, 533, 2272
Hpy166II	GTNNAC	4 cut(s)	282, 367, 909, 2314
Hpy8I	GTNNAC	4 cut(s)	282, 367, 909, 2314
Hpy99I	CGWCG	3 cut(s)	206, 292, 2410
HpyAV	CCTTC	5 cut(s)	1150, 1240, 1447, 2849, 2858
HpyCH4III	ACNGT	8 cut(s)	202, 456, 535, 1276, 1297, 2130, 2461, 3075
HpyCH4IV	ACGT	6 cut(s)	122, 183, 1105, 1131, 2374, 2408
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 310, 329, 977, 1345, 2563
HpySE526I	ACGT	6 cut(s)	122, 183, 1105, 1131, 2374, 2408
HspAI	GCGC	4 cut(s)	338, 356, 560, 2266
Kpn2I	TCCGGA	2 cut(s)	298, 1121
KspAI	GTTAAC	1 cut(s)	367
Lsp1109I	GCAGC	6 cut(s)	30, 143, 544, 716, 2615, 3024
LweI	GCATC	6 cut(s)	229, 343, 544, 1859, 2230, 2640
MaeI	CTAG	4 cut(s)	482, 1469, 1871, 2475
MaeII	ACGT	6 cut(s)	122, 183, 1105, 1131, 2374, 2408
MaeIII	GTNAC	4 cut(s)	175, 921, 2014, 2912
MflI	RGATCY	6 cut(s)	193, 1118, 2031, 2146, 2485, 2846
MhlI	GDGCHC	5 cut(s)	306, 454, 963, 1392, 2559
MlyI	GAGTC	3 cut(s)	47, 136, 1022
MmeI	TCCRAC	5 cut(s)	42, 221, 1211, 1389, 2662
MroI	TCCGGA	2 cut(s)	298, 1121
MslI	CAYNNNNRTG	2 cut(s)	1403, 3033
MspA1I	CMGCKG	1 cut(s)	156
MspI	CCGG	7 cut(s)	85, 148, 160, 299, 1122, 2580, 2875
MspR9I	CCNGG	9 cut(s)	85, 545, 736, 867, 1020, 1255, 2258, 2303, 2876
MssI	GTTTAAAC	1 cut(s)	670
Mva1269I	GAATGC	5 cut(s)	379, 466, 1197, 2268, 2927
MvaI	CCWGG	7 cut(s)	545, 736, 867, 1020, 1255, 2258, 2303
MvnI	CGCG	1 cut(s)	103
MwoI	GCNNNNNNNGC	6 cut(s)	109, 310, 329, 977, 1345, 2563
NciI	CCSGG	2 cut(s)	85, 2876
NdeI	CATATG	2 cut(s)	493, 3047
NheI	GCTAGC	1 cut(s)	481
NlaIV	GGNNCC	9 cut(s)	82, 152, 195, 549, 1528, 2033, 2656, 2848, 2954
NmeAIII	GCCGAG	1 cut(s)	733
NmuCI	GTSAC	3 cut(s)	175, 921, 2014
NsbI	TGCGCA	1 cut(s)	339
NspI	RCATGY	1 cut(s)	1361
OliI	CACNNNNGTG	1 cut(s)	1403
PagI	TCATGA	4 cut(s)	2272, 2467, 2719, 3028
PaqCI	CACCTGC	1 cut(s)	476
PasI	CCCWGGG	1 cut(s)	735
PceI	AGGCCT	2 cut(s)	323, 1253
PciI	ACATGT	1 cut(s)	1357
PctI	GAATGC	5 cut(s)	379, 466, 1197, 2268, 2927
PflFI	GACNNNGTC	1 cut(s)	2093
PfoI	TCCNGGA	1 cut(s)	83
PkrI	GCNGC	8 cut(s)	26, 45, 155, 158, 559, 706, 2630, 3014
PleI	GAGTC	3 cut(s)	46, 136, 1022
PmaCI	CACGTG	1 cut(s)	2375
PmeI	GTTTAAAC	1 cut(s)	670
PmlI	CACGTG	1 cut(s)	2375
PpsI	GAGTC	3 cut(s)	46, 136, 1022
Ppu21I	YACGTR	1 cut(s)	2375
PscI	ACATGT	1 cut(s)	1357
PshBI	ATTAAT	1 cut(s)	2540
PsiI	TTATAA	2 cut(s)	1974, 2517
Psp124BI	GAGCTC	2 cut(s)	1392, 2559
Psp6I	CCWGG	7 cut(s)	543, 734, 865, 1018, 1253, 2256, 2301
PspCI	CACGTG	1 cut(s)	2375
PspEI	GGTNACC	1 cut(s)	175
PspGI	CCWGG	7 cut(s)	543, 734, 865, 1018, 1253, 2256, 2301
PspN4I	GGNNCC	9 cut(s)	82, 152, 195, 549, 1528, 2033, 2656, 2848, 2954
PspPI	GGNCC	1 cut(s)	2953
PstNI	CAGNNNCTG	2 cut(s)	557, 1345
PsuI	RGATCY	6 cut(s)	193, 1118, 2031, 2146, 2485, 2846
PsyI	GACNNNGTC	1 cut(s)	2093
RsaI	GTAC	7 cut(s)	269, 653, 1011, 2415, 2508, 2575, 2644
RsaNI	GTAC	7 cut(s)	268, 652, 1010, 2414, 2507, 2574, 2643
RseI	CAYNNNNRTG	2 cut(s)	1403, 3033
SacI	GAGCTC	2 cut(s)	1392, 2559
SatI	GCNGC	8 cut(s)	25, 44, 154, 157, 558, 705, 2629, 3013
Sau96I	GGNCC	1 cut(s)	2953
ScaI	AGTACT	1 cut(s)	2575
SchI	GAGTC	3 cut(s)	47, 136, 1022
ScrFI	CCNGG	9 cut(s)	85, 545, 736, 867, 1020, 1255, 2258, 2303, 2876
SduI	GDGCHC	5 cut(s)	306, 454, 963, 1392, 2559
SfaNI	GCATC	6 cut(s)	229, 343, 544, 1859, 2230, 2640
SfcI	CTRYAG	1 cut(s)	440
SinI	GGWCC	1 cut(s)	2953
SmiMI	CAYNNNNRTG	2 cut(s)	1403, 3033
SmlI	CTYRAG	3 cut(s)	719, 895, 2053
SmoI	CTYRAG	3 cut(s)	719, 895, 2053
SseBI	AGGCCT	2 cut(s)	323, 1253
SsiI	CCGC	9 cut(s)	5, 24, 27, 103, 154, 497, 2035, 2135, 2317
SspMI	CTAG	4 cut(s)	482, 1469, 1871, 2475
SstI	GAGCTC	2 cut(s)	1392, 2559
StuI	AGGCCT	2 cut(s)	323, 1253
StyD4I	CCNGG	9 cut(s)	83, 543, 734, 865, 1018, 1253, 2256, 2301, 2874
StyI	CCWWGG	1 cut(s)	2850
TaaI	ACNGT	8 cut(s)	202, 456, 535, 1276, 1297, 2130, 2461, 3075
TaiI	ACGT	6 cut(s)	125, 186, 1108, 1134, 2377, 2411
TaqI	TCGA	5 cut(s)	204, 1354, 2250, 2664, 3066
TaqII	GACCGA	1 cut(s)	569
TatI	WGTACW	3 cut(s)	1009, 2413, 2573
TauI	GCSGC	2 cut(s)	27, 156
TscAI	CASTG	9 cut(s)	459, 1038, 1170, 1537, 1549, 2110, 2165, 2530, 2599
TseFI	GTSAC	3 cut(s)	175, 921, 2014
TseI	GCWGC	6 cut(s)	43, 156, 557, 704, 2628, 3012
Tsp45I	GTSAC	3 cut(s)	175, 921, 2014
TspGWI	ACGGA	1 cut(s)	338
TspRI	CASTG	9 cut(s)	459, 1038, 1170, 1537, 1549, 2110, 2165, 2530, 2599
Tth111I	GACNNNGTC	1 cut(s)	2093
VpaK11BI	GGWCC	1 cut(s)	2953
VspI	ATTAAT	1 cut(s)	2540
XagI	CCTNNNNNAGG	1 cut(s)	2478
XapI	RAATTY	4 cut(s)	434, 773, 1464, 2795
XbaI	TCTAGA	1 cut(s)	1468
XceI	RCATGY	1 cut(s)	1361
XspI	CTAG	4 cut(s)	482, 1469, 1871, 2475
ZrmI	AGTACT	1 cut(s)	2575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.