Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002988

Physical Location & Seq

Genomic Coordinates Reverse (-)

59965353 .. 59971104

Gene Structure 5752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00379690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGGCGGCTATCCCATTCTCAGCAAAGTCAGCTACTCATTCTACGTTCATCTCGAGCTTCATAGCAGGCTCCAACCACATAAGAAGACATTCATGGCTGTTCTTGACCTCAACCTCTGGTTCTGTTTCTGGCCGAGCTAGGAGAAAGCTCTGTGTGAAGAATGTGGCTGCTACTGATCAAAAGCAAGAACCTGAAGACGTTGCCACCCGAGAAGATTCTGCATCCATTTCATCGATTATCAAATACCACGCGGAATTCACACCTTGCTTCTCTATGGAATCGTTTGGACTTCCCAAGGCATTCTATGCCACCGCGGAGAGTGTTCGTGATATGCTTATCATTAACTGGAATACTACATATGAGTACTGTGAGAGGTTGAATGTAAAGCAGGCGTATTATCTCTCAATGGAGTATCTACAGGGTAGAGCATTGCTAAATGCAATTGGCAACTTGGAGCTTTCAGGGCCTTATGCAGAGGCTTTGGAAAAGCTTGGGCACAATCTTGAGGATGTAGCTAGGCAGGAACCAGATGCTGCTCTCGGAAATGGGGGGCTAGGGAGGCTTGCTTCCTGCTTTTTGGACTCCCTGGCGACCCAAAATTACCCGGCATGGGGATATGGACTAAGATACAAGTATGGATTGTTTAAGCAACACATTACAAAAGATGGCCAGGAGGAAGTTGCTGAAAATTGGCTTGAGATGGGCAATCCATGGGAAATTCCAAGAAATGATGTGACCTATCCTGTGAAATTCTATGGTGAAGTTATTTCGGGGCCAGATGGGAAAAAACAATGGGTTGGAGGAGACAATGTCACCGCCGTTGCCTATGATGTCCCCATACCAGGATATAAAACTAAAACCACCATAAACCTTCGACTGTGGTCCACAAAGGCTGCACCAGCAGAATTTGATTTGCATGCTTTCAACACAGGAGATCATGCCAAGGCATATGCAGCTATAAAGAATGCTGAAAAGATCTGTTACATATTGTACCCCGGGGATGAAACCATGGAGGGAAAATCACTTAGATTGAAGCAACAATATACACTATGTTCTGCTTCTCTCCAAGACATAATCGCACGTTTTGAAAGGAGATCAGGGGACACTGTGAATTGGGAAAAATTTCCTGAAAAAGTTGCAGTGCAGATGAATGATACTCATCCAACTCTCTGCATTCCAGAGTTGATAAGAATATTGGTGGATGTGAAGGGATTGAGCTGGAAGGAAGGCTGGAATGTTACTCGAAGAACCGTTGCATACACAAACCATACAGTTCTACCCGAGGCATTGGAGAAATGGAGTTTAAATCTTATACAAGAGTTGTTGCCAAGACATGTTGAGATCATAAAAATGATTGATGAGGAGCTAATTCATACTATTGTTGCTGAGTATGGCACAGAGGATCTTGACTTGTTGCTACAAAAAGTGAAAGAAATGAGAATTCTAGATAACATTGAGTTGCCTGACTCTGTCTTGGAAATGCTCCCTAAATCAGAAGAAAGCTCCGTGGTTGATCACATTGAGTCGGTTTCTGATAATGAAACTAAAGGCACTGACAAAGGAGACCAATCTCAAGTACTGGACACTGAGAAGAAAAATGAGGTTTCATTTGAACCAGATCCTGAGCTGCCAAAGATGGTGCGCATGGCTAATCTATGTATTGCTGGTGGACATGCAGTAAATGGAGTTGCTGAGATTCATAGTGAAATAGTGAAGAATGAAGTATTTAACGATTTCTATAAGTTGTGGCCTGAGAAATTTCAAAATAAGACCAATGGGGTGACACCTCGAAGATGGATTCGTTTCTGCAATCCAGATCTAAGTAGACTTATAACCAAGTACATTGGAACAGAAGAGTGGGTAAAAAATACTGAGATGTTGGTGAACCTTCAAAAGTTTGCTGATAATGAAGATTTCCAGTCTGAATGGAGGGAAGTAAAAATGAGAAACAAGATTAAGGTTGCATCATTCCTCAAGGAAAAAACTGGTTATCTAGTCAACCCCAATGCAATGTTTGATGTACAGGTGAAGCGCATCCATGAATATAAACGGCAGCTAATGAATATCATGGGAATTATTTATCGATACAAGAAGATGAAGGAAATGAGTCCCAAGGAAAGAGAAGCAAGGTTTGTTCCAAGGGTGTGTATATTTGGAGGGAAGGCATTCACGACATATGTTCAAGCCAAAAGGATTGTGAAATTCATCACTGATGTTGGAGCCATTGTAAACCGCGATCAAGAGATAGGTGATCTTTTGAAGGTTGTGTTTGTTCCTGATTACAATGTGAGTGTTGCAGAAGTGCTTATTCCTGGTAGTGAACTGTCCCAGCATATCAGTACTGCTGGAATGGAGGCCAGTGGAACTAGCAATATGAAGTTTACAATGAACGGGTGTATACAAATTGGAACTCTAGATGGGGCTAATGTTGAAATAAGGGAAGAGGTTGGAGAGGAAAACTTTTTCCTCTTTGGTGCTAGAGCTGAAGAAATATCTGGACTAAGGAAACAAAGATCTGAAGGAAAGTTGGTGGCGGATCCACGGTTTGAAGAAGTGAAGGTATATGTGAGGAGTGGTGTTTTCGGTCCTTACAACTACGATGAACTGATGGGATCTCTGGAAGGAAATGAAGGTTACGGTCGTGCTGATTATTTTCTTGTTGGATACGACTTCCCTAGTTATATAGAATGCCAAGACAAGGTCGATGAAGCATATCGAGATCAAAAGAGGTGGACAAAGATGTCGATTTTGAACACAGCTGGTTCATATAAATTCAGCAGTGACCGTACAATTCATGAATATGCAAGAGACATATGGAGGATCGAACCTATAGTACTGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009501 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

947

Amino Acids

107.7

Weight (kDa)

5.71

Isoelectric Point (pI)

42.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphorylase	PF00343	161 - 482	5.6e-127	Carbohydrate phosphorylase
Phosphorylase	PF00343	526 - 941	5.8e-166	Carbohydrate phosphorylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29320
fragaria_vesca	FvH4_4g30370 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260 FvH4_6g47260
malus_domestica	MD00G1156200.v1.1 MD09G1062600.v1.1 MD16G1063300.v1.1
prunus_persica	Prupe.1G283400_v2.0.a1 Prupe.1G283400_v2.0.a1 Prupe.3G257600_v2.0.a1
pyrus_communis	pycom111g05290
rosa_chinensis	RchiOBHm_Chr2g0166331 RchiOBHm_Chr4g0438671
rosa_laevigata	RLG00000006342 RLG00000021610
rosa_multiflora	Rmu_sc0000738.1_g000042 Rmu_sc0002505.1_g000002 Rmu_sc0007974.1_g000007
rosa_roxburghii	Rroxscaffold_2G00084990 Rroxscaffold_5G00379690 Rroxscaffold_7G00200130
rosa_rugosa	Rorug02G0522200 Rorug04G0312500 Rorug04G0312600 Rorug04G0312600
rosa_samantha	Rh2AG588200 Rh2BG600200 Rh2CG571100 Rh2DG610400 Rh4AG363000 Rh4BG374300 Rh4CG388400 Rh4DG368900
rosa_wichuraiana	Rw0G007140 Rw0G016690 Rw2G049020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1832
AasI	GACNNNNNNGTC	1 cut(s)	2740
Acc16I	TGCGCA	1 cut(s)	1643
AccI	GTMKAC	2 cut(s)	1825, 2398
AccII	CGCG	3 cut(s)	251, 314, 2235
AciI	CCGC	7 cut(s)	5, 251, 312, 314, 816, 2233, 2534
AclWI	GGATC	6 cut(s)	1410, 1613, 2531, 2544, 2620, 2828
AcoI	YGGCCR	2 cut(s)	130, 667
AcsI	RAATTY	9 cut(s)	254, 717, 749, 905, 1121, 1440, 1757, 2201, 2771
AcuI	CTGAAG	3 cut(s)	213, 2505, 2538
AfaI	GTAC	8 cut(s)	365, 992, 1578, 1841, 2022, 2341, 2788, 2835
AfiI	CCNNNNNNNGG	4 cut(s)	610, 611, 842, 2698
AflIII	ACRYGT	1 cut(s)	1333
AjnI	CCWGG	4 cut(s)	585, 669, 841, 2311
Alw26I	GTCTC	3 cut(s)	798, 1557, 2802
AlwI	GGATC	6 cut(s)	1410, 1613, 2531, 2544, 2620, 2828
AlwNI	CAGNNNCTG	2 cut(s)	533, 1622
Ama87I	CYCGRG	4 cut(s)	52, 207, 995, 1280
AoxI	GGCC	6 cut(s)	130, 464, 667, 773, 1748, 2355
ApeKI	GCWGC	6 cut(s)	167, 533, 893, 953, 1627, 2053
ApoI	RAATTY	9 cut(s)	254, 717, 749, 905, 1121, 1440, 1757, 2201, 2771
Asp700I	GAANNNNTTC	3 cut(s)	88, 1122, 2165
AspLEI	GCGC	2 cut(s)	1644, 2034
AspS9I	GGNCC	4 cut(s)	464, 773, 882, 2585
AsuC2I	CCSGG	3 cut(s)	605, 996, 997
AsuHPI	GGTGA	6 cut(s)	770, 805, 1792, 1894, 2038, 2261
AvaI	CYCGRG	4 cut(s)	52, 207, 995, 1280
AvaII	GGWCC	2 cut(s)	882, 2585
BaeGI	GKGCMC	1 cut(s)	498
BalI	TGGCCA	1 cut(s)	669
BamHI	GGATCC	1 cut(s)	2536
BbsI	GAAGAC	2 cut(s)	91, 201
BbvI	GCAGC	6 cut(s)	154, 520, 880, 965, 1614, 2065
BccI	CCATC	7 cut(s)	659, 694, 773, 1630, 1788, 2411, 2602
BceAI	ACGGC	2 cut(s)	803, 2066
BciT130I	CCWGG	4 cut(s)	587, 671, 843, 2313
BciVI	GTATCC	1 cut(s)	2657
BclI	TGATCA	2 cut(s)	175, 1513
BcnI	CCSGG	3 cut(s)	605, 996, 997
BcoDI	GTCTC	3 cut(s)	798, 1557, 2802
BfaI	CTAG	9 cut(s)	138, 516, 554, 1445, 1994, 2367, 2414, 2478, 2676
BfmI	CTRYAG	2 cut(s)	416, 2829
BfuI	GTATCC	1 cut(s)	2657
BglII	AGATCT	3 cut(s)	975, 1816, 2513
BisI	GCNGC	7 cut(s)	6, 168, 534, 894, 954, 1628, 2054
BlsI	GCNGC	7 cut(s)	7, 169, 535, 895, 955, 1629, 2055
BmcAI	AGTACT	4 cut(s)	365, 1578, 2341, 2835
Bme1390I	CCNGG	7 cut(s)	587, 605, 671, 843, 996, 997, 2313
Bme18I	GGWCC	2 cut(s)	882, 2585
BmeT110I	CYCGRG	4 cut(s)	52, 207, 995, 1280
BmgT120I	GGNCC	4 cut(s)	464, 773, 882, 2585
BmiI	GGNNCC	5 cut(s)	70, 525, 774, 2221, 2538
BmrFI	CCNGG	7 cut(s)	587, 605, 671, 843, 996, 997, 2313
BmsI	GCATC	4 cut(s)	230, 520, 1973, 2043
BoxI	GACNNNNGTC	1 cut(s)	880
BpiI	GAAGAC	2 cut(s)	91, 201
Bpu10I	CCTNAGC	1 cut(s)	1623
BpuEI	CTTGAG	4 cut(s)	524, 716, 1557, 1958
BpuMI	CCSGG	3 cut(s)	605, 996, 997
Bsa29I	ATCGAT	2 cut(s)	233, 2083
BsaBI	GATNNNNATC	1 cut(s)	1158
BsaI	GGTCTC	1 cut(s)	1557
BsaXI	ACNNNNNCTCC	4 cut(s)	795, 825, 2211, 2241
Bsc4I	CCNNNNNNNGG	4 cut(s)	610, 611, 842, 2698
Bse1I	ACTGG	5 cut(s)	350, 1584, 1918, 1990, 2358
Bse3DI	GCAATG	2 cut(s)	428, 2016
Bse8I	GATNNNNATC	1 cut(s)	1158
BseBI	CCWGG	4 cut(s)	587, 671, 843, 2313
BseCI	ATCGAT	2 cut(s)	233, 2083
BseGI	GGATG	6 cut(s)	221, 514, 1006, 1159, 1207, 2034
BseJI	GATNNNNATC	1 cut(s)	1158
BseLI	CCNNNNNNNGG	4 cut(s)	610, 611, 842, 2698
BseMI	GCAATG	2 cut(s)	428, 2016
BseMII	CTCAG	7 cut(s)	33, 1377, 1578, 1614, 1683, 1743, 1863
BseNI	ACTGG	5 cut(s)	350, 1584, 1918, 1990, 2358
BseRI	GAGGAG	3 cut(s)	816, 1376, 2584
BseSI	GKGCMC	1 cut(s)	498
BseXI	GCAGC	6 cut(s)	154, 520, 880, 965, 1614, 2065
BseYI	CCCAGC	1 cut(s)	2328
BsgI	GTGCAG	2 cut(s)	879, 1163
Bsh1236I	CGCG	3 cut(s)	251, 314, 2235
Bsh1285I	CGRYCG	1 cut(s)	2641
BshFI	GGCC	6 cut(s)	132, 466, 669, 775, 1750, 2357
BshVI	ATCGAT	2 cut(s)	233, 2083
BsiEI	CGRYCG	1 cut(s)	2641
BsiHKCI	CYCGRG	4 cut(s)	52, 207, 995, 1280
BsiSI	CCGG	2 cut(s)	605, 996
BslFI	GGGAC	4 cut(s)	818, 1115, 2094, 2311
BslI	CCNNNNNNNGG	4 cut(s)	610, 611, 842, 2698
BsmAI	GTCTC	3 cut(s)	798, 1557, 2802
BsmFI	GGGAC	4 cut(s)	818, 1115, 2094, 2311
BsmI	GAATGC	5 cut(s)	299, 970, 1173, 2165, 2693
BsnI	GGCC	6 cut(s)	132, 466, 669, 775, 1750, 2357
Bso31I	GGTCTC	1 cut(s)	1557
BsoBI	CYCGRG	4 cut(s)	52, 207, 995, 1280
Bsp1286I	GDGCHC	1 cut(s)	498
Bsp1407I	TGTACA	1 cut(s)	2020
Bsp19I	CCATGG	2 cut(s)	710, 1008
BspACI	CCGC	7 cut(s)	5, 251, 312, 314, 816, 2233, 2534
BspANI	GGCC	6 cut(s)	132, 466, 669, 775, 1750, 2357
BspCNI	CTCAG	7 cut(s)	32, 1378, 1579, 1615, 1684, 1744, 1864
BspDI	ATCGAT	2 cut(s)	233, 2083
BspFNI	CGCG	3 cut(s)	251, 314, 2235
BspHI	TCATGA	1 cut(s)	2794
BspLI	GGNNCC	5 cut(s)	70, 525, 774, 2221, 2538
BspPI	GGATC	6 cut(s)	1410, 1613, 2531, 2544, 2620, 2828
BspTNI	GGTCTC	1 cut(s)	1557
BsrDI	GCAATG	2 cut(s)	428, 2016
BsrGI	TGTACA	1 cut(s)	2020
BsrI	ACTGG	5 cut(s)	350, 1584, 1918, 1990, 2358
BssNAI	GTATAC	1 cut(s)	2399
BssT1I	CCWWGG	6 cut(s)	294, 710, 942, 1008, 2112, 2138
Bst1107I	GTATAC	1 cut(s)	2399
Bst2UI	CCWGG	4 cut(s)	587, 671, 843, 2313
Bst4CI	ACNGT	9 cut(s)	368, 879, 1108, 1252, 1273, 2325, 2544, 2639, 2786
Bst6I	CTCTTC	2 cut(s)	1848, 2436
BstAPI	GCANNNNNTGC	1 cut(s)	305
BstAUI	TGTACA	1 cut(s)	2020
BstC8I	GCNNGC	4 cut(s)	67, 390, 564, 918
BstDSI	CCRYGG	5 cut(s)	312, 710, 1008, 1506, 2540
BstF5I	GGATG	6 cut(s)	221, 514, 1006, 1159, 1207, 2034
BstFNI	CGCG	3 cut(s)	251, 314, 2235
BstHHI	GCGC	2 cut(s)	1644, 2034
BstMAI	GTCTC	3 cut(s)	798, 1557, 2802
BstMCI	CGRYCG	1 cut(s)	2641
BstMWI	GCNNNNNNNGC	6 cut(s)	29, 305, 463, 559, 899, 953
BstNI	CCWGG	4 cut(s)	587, 671, 843, 2313
BstNSI	RCATGY	3 cut(s)	920, 1337, 1676
BstPAI	GACNNNNGTC	1 cut(s)	880
BstSCI	CCNGG	7 cut(s)	585, 603, 669, 841, 994, 995, 2311
BstSFI	CTRYAG	2 cut(s)	416, 2829
BstSLI	GKGCMC	1 cut(s)	498
BstUI	CGCG	3 cut(s)	251, 314, 2235
BstV1I	GCAGC	6 cut(s)	154, 520, 880, 965, 1614, 2065
BstV2I	GAAGAC	2 cut(s)	91, 201
BstX2I	RGATCY	7 cut(s)	975, 1402, 1618, 1816, 2513, 2536, 2612
BstYI	RGATCY	7 cut(s)	975, 1402, 1618, 1816, 2513, 2536, 2612
BstZ17I	GTATAC	1 cut(s)	2399
Bsu15I	ATCGAT	2 cut(s)	233, 2083
BsuI	GTATCC	1 cut(s)	2657
BsuRI	GGCC	6 cut(s)	132, 466, 669, 775, 1750, 2357
BsuTUI	ATCGAT	2 cut(s)	233, 2083
BtgI	CCRYGG	5 cut(s)	312, 710, 1008, 1506, 2540
BtsCI	GGATG	6 cut(s)	221, 514, 1006, 1159, 1207, 2034
BtsI	GCAGTG	2 cut(s)	1146, 2785
BtsIMutI	CAGTG	7 cut(s)	1104, 1146, 1551, 1584, 2208, 2365, 2785
Cac8I	GCNNGC	4 cut(s)	67, 390, 564, 918
CaiI	CAGNNNCTG	2 cut(s)	533, 1622
CciI	TCATGA	1 cut(s)	2794
CfoI	GCGC	2 cut(s)	1644, 2034
Cfr13I	GGNCC	4 cut(s)	464, 773, 882, 2585
Cfr42I	CCGCGG	1 cut(s)	315
Cfr9I	CCCGGG	1 cut(s)	995
ClaI	ATCGAT	2 cut(s)	233, 2083
Csp6I	GTAC	8 cut(s)	364, 991, 1577, 1840, 2021, 2340, 2787, 2834
CspCI	CAANNNNNGTGG	2 cut(s)	2711, 2746
CviQI	GTAC	8 cut(s)	364, 991, 1577, 1840, 2021, 2340, 2787, 2834
DraI	TTTAAA	1 cut(s)	1305
DrdI	GACNNNNNNGTC	1 cut(s)	2740
DseDI	GACNNNNNNGTC	1 cut(s)	2740
EaeI	YGGCCR	2 cut(s)	130, 667
Eam1104I	CTCTTC	2 cut(s)	1848, 2436
EarI	CTCTTC	2 cut(s)	1848, 2436
EciI	GGCGGA	1 cut(s)	2549
Eco130I	CCWWGG	6 cut(s)	294, 710, 942, 1008, 2112, 2138
Eco31I	GGTCTC	1 cut(s)	1557
Eco47I	GGWCC	2 cut(s)	882, 2585
Eco57I	CTGAAG	3 cut(s)	213, 2505, 2538
Eco88I	CYCGRG	4 cut(s)	52, 207, 995, 1280
EcoO109I	RGGNCCY	1 cut(s)	464
EcoRI	GAATTC	2 cut(s)	254, 1440
EcoRII	CCWGG	4 cut(s)	585, 669, 841, 2311
EcoT14I	CCWWGG	6 cut(s)	294, 710, 942, 1008, 2112, 2138
ErhI	CCWWGG	6 cut(s)	294, 710, 942, 1008, 2112, 2138
FaqI	GGGAC	4 cut(s)	818, 1115, 2094, 2311
FauNDI	CATATG	4 cut(s)	358, 949, 2176, 2813
FbaI	TGATCA	2 cut(s)	175, 1513
FblI	GTMKAC	2 cut(s)	1825, 2398
Fnu4HI	GCNGC	7 cut(s)	6, 168, 534, 894, 954, 1628, 2054
FokI	GGATG	6 cut(s)	208, 521, 1013, 1146, 1214, 2021
Fsp4HI	GCNGC	7 cut(s)	6, 168, 534, 894, 954, 1628, 2054
FspAI	RTGCGCAY	1 cut(s)	1643
FspBI	CTAG	9 cut(s)	138, 516, 554, 1445, 1994, 2367, 2414, 2478, 2676
FspI	TGCGCA	1 cut(s)	1643
GlaI	GCGC	2 cut(s)	1643, 2033
GluI	GCNGC	7 cut(s)	6, 168, 534, 894, 954, 1628, 2054
GsaI	CCCAGC	1 cut(s)	2332
HaeIII	GGCC	6 cut(s)	132, 466, 669, 775, 1750, 2357
HapII	CCGG	2 cut(s)	605, 996
HhaI	GCGC	2 cut(s)	1644, 2034
Hin6I	GCGC	2 cut(s)	1642, 2032
HinP1I	GCGC	2 cut(s)	1642, 2032
HincII	GTYRAC	1 cut(s)	1999
HindII	GTYRAC	1 cut(s)	1999
HindIII	AAGCTT	1 cut(s)	488
HinfI	GANTC	8 cut(s)	215, 278, 581, 1466, 1523, 1696, 1798, 2107
HpaII	CCGG	2 cut(s)	605, 996
HphI	GGTGA	6 cut(s)	770, 805, 1792, 1894, 2038, 2261
Hpy188I	TCNGA	5 cut(s)	542, 1495, 1534, 1924, 2518
HpyCH4III	ACNGT	9 cut(s)	368, 879, 1108, 1252, 1273, 2325, 2544, 2639, 2786
HpyCH4IV	ACGT	3 cut(s)	44, 198, 1081
HpyF10VI	GCNNNNNNNGC	6 cut(s)	29, 305, 463, 559, 899, 953
HpySE526I	ACGT	3 cut(s)	44, 198, 1081
HspAI	GCGC	2 cut(s)	1642, 2032
Ksp22I	TGATCA	2 cut(s)	175, 1513
KspI	CCGCGG	1 cut(s)	315
LmnI	GCTCC	6 cut(s)	74, 454, 1363, 1488, 1508, 2219
Lsp1109I	GCAGC	6 cut(s)	154, 520, 880, 965, 1614, 2065
LweI	GCATC	4 cut(s)	230, 520, 1973, 2043
MaeI	CTAG	9 cut(s)	138, 516, 554, 1445, 1994, 2367, 2414, 2478, 2676
MaeII	ACGT	3 cut(s)	44, 198, 1081
MaeIII	GTNAC	7 cut(s)	733, 811, 980, 1237, 1780, 2633, 2780
MfeI	CAATTG	1 cut(s)	441
MflI	RGATCY	7 cut(s)	975, 1402, 1618, 1816, 2513, 2536, 2612
MhlI	GDGCHC	1 cut(s)	498
MlsI	TGGCCA	1 cut(s)	669
MluNI	TGGCCA	1 cut(s)	669
MlyI	GAGTC	4 cut(s)	575, 1460, 1532, 2116
MmeI	TCCRAC	6 cut(s)	96, 778, 1187, 2197, 2428, 2641
Mox20I	TGGCCA	1 cut(s)	669
MroXI	GAANNNNTTC	3 cut(s)	88, 1122, 2165
MscI	TGGCCA	1 cut(s)	669
MseI	TTAA	5 cut(s)	342, 645, 1304, 1728, 1956
MslI	CAYNNNNRTG	2 cut(s)	1349, 2799
Msp20I	TGGCCA	1 cut(s)	669
MspA1I	CMGCKG	2 cut(s)	314, 2759
MspI	CCGG	2 cut(s)	605, 996
MspR9I	CCNGG	7 cut(s)	587, 605, 671, 843, 996, 997, 2313
MunI	CAATTG	1 cut(s)	441
Mva1269I	GAATGC	5 cut(s)	299, 970, 1173, 2165, 2693
MvaI	CCWGG	4 cut(s)	587, 671, 843, 2313
MvnI	CGCG	3 cut(s)	251, 314, 2235
MwoI	GCNNNNNNNGC	6 cut(s)	29, 305, 463, 559, 899, 953
NciI	CCSGG	3 cut(s)	605, 996, 997
NcoI	CCATGG	2 cut(s)	710, 1008
NdeI	CATATG	4 cut(s)	358, 949, 2176, 2813
NlaIV	GGNNCC	5 cut(s)	70, 525, 774, 2221, 2538
NmeAIII	GCCGAG	1 cut(s)	158
NmuCI	GTSAC	4 cut(s)	733, 811, 1780, 2780
NsbI	TGCGCA	1 cut(s)	1643
NspI	RCATGY	3 cut(s)	920, 1337, 1676
PaeI	GCATGC	1 cut(s)	920
PaeR7I	CTCGAG	1 cut(s)	52
PagI	TCATGA	1 cut(s)	2794
PciI	ACATGT	1 cut(s)	1333
PcsI	WCGNNNNNNNCGW	1 cut(s)	50
PctI	GAATGC	5 cut(s)	299, 970, 1173, 2165, 2693
PdmI	GAANNNNTTC	3 cut(s)	88, 1122, 2165
PfeI	GAWTC	4 cut(s)	215, 278, 1696, 1798
PflFI	GACNNNGTC	3 cut(s)	809, 1469, 2699
PkrI	GCNGC	7 cut(s)	7, 169, 535, 895, 955, 1629, 2055
PleI	GAGTC	4 cut(s)	575, 1460, 1531, 2115
PpsI	GAGTC	4 cut(s)	575, 1460, 1531, 2115
PscI	ACATGT	1 cut(s)	1333
PshAI	GACNNNNGTC	1 cut(s)	880
PsiI	TTATAA	1 cut(s)	1832
Psp6I	CCWGG	4 cut(s)	585, 669, 841, 2311
PspFI	CCCAGC	1 cut(s)	2328
PspGI	CCWGG	4 cut(s)	585, 669, 841, 2311
PspN4I	GGNNCC	5 cut(s)	70, 525, 774, 2221, 2538
PspPI	GGNCC	4 cut(s)	464, 773, 882, 2585
PsrI	GAACNNNNNNTAC	1 cut(s)	2817
PstNI	CAGNNNCTG	2 cut(s)	533, 1622
PsuI	RGATCY	7 cut(s)	975, 1402, 1618, 1816, 2513, 2536, 2612
PsyI	GACNNNGTC	3 cut(s)	809, 1469, 2699
PvuII	CAGCTG	1 cut(s)	2759
RsaI	GTAC	8 cut(s)	365, 992, 1578, 1841, 2022, 2341, 2788, 2835
RsaNI	GTAC	8 cut(s)	364, 991, 1577, 1840, 2021, 2340, 2787, 2834
RseI	CAYNNNNRTG	2 cut(s)	1349, 2799
SacII	CCGCGG	1 cut(s)	315
SaqAI	TTAA	5 cut(s)	342, 645, 1304, 1728, 1956
SatI	GCNGC	7 cut(s)	6, 168, 534, 894, 954, 1628, 2054
Sau96I	GGNCC	4 cut(s)	464, 773, 882, 2585
ScaI	AGTACT	4 cut(s)	365, 1578, 2341, 2835
SchI	GAGTC	4 cut(s)	575, 1460, 1532, 2116
ScrFI	CCNGG	7 cut(s)	587, 605, 671, 843, 996, 997, 2313
SduI	GDGCHC	1 cut(s)	498
SfaNI	GCATC	4 cut(s)	230, 520, 1973, 2043
SfcI	CTRYAG	2 cut(s)	416, 2829
Sfr274I	CTCGAG	1 cut(s)	52
Sfr303I	CCGCGG	1 cut(s)	315
SgrBI	CCGCGG	1 cut(s)	315
SinI	GGWCC	2 cut(s)	882, 2585
SlaI	CTCGAG	1 cut(s)	52
SmaI	CCCGGG	1 cut(s)	997
SmiMI	CAYNNNNRTG	2 cut(s)	1349, 2799
SmlI	CTYRAG	5 cut(s)	52, 503, 695, 1572, 1973
SmoI	CTYRAG	5 cut(s)	52, 503, 695, 1572, 1973
SphI	GCATGC	1 cut(s)	920
SsiI	CCGC	7 cut(s)	5, 251, 312, 314, 816, 2233, 2534
SspI	AATATT	1 cut(s)	1194
SspMI	CTAG	9 cut(s)	138, 516, 554, 1445, 1994, 2367, 2414, 2478, 2676
StyD4I	CCNGG	7 cut(s)	585, 603, 669, 841, 994, 995, 2311
StyI	CCWWGG	6 cut(s)	294, 710, 942, 1008, 2112, 2138
TaaI	ACNGT	9 cut(s)	368, 879, 1108, 1252, 1273, 2325, 2544, 2639, 2786
TaiI	ACGT	3 cut(s)	47, 201, 1084
TaqII	GACCGA	1 cut(s)	2573
TatI	WGTACW	6 cut(s)	363, 1576, 1839, 2020, 2339, 2833
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	4 cut(s)	215, 278, 1696, 1798
Tru1I	TTAA	5 cut(s)	342, 645, 1304, 1728, 1956
Tru9I	TTAA	5 cut(s)	342, 645, 1304, 1728, 1956
TscAI	CASTG	7 cut(s)	1111, 1146, 1558, 1591, 2215, 2365, 2785
TseFI	GTSAC	4 cut(s)	733, 811, 1780, 2780
TseI	GCWGC	6 cut(s)	167, 533, 893, 953, 1627, 2053
Tsp45I	GTSAC	4 cut(s)	733, 811, 1780, 2780
TspGWI	ACGGA	1 cut(s)	1495
TspMI	CCCGGG	1 cut(s)	995
TspRI	CASTG	7 cut(s)	1111, 1146, 1558, 1591, 2215, 2365, 2785
Tth111I	GACNNNGTC	3 cut(s)	809, 1469, 2699
VpaK11BI	GGWCC	2 cut(s)	882, 2585
XapI	RAATTY	9 cut(s)	254, 717, 749, 905, 1121, 1440, 1757, 2201, 2771
XbaI	TCTAGA	2 cut(s)	1444, 2413
XceI	RCATGY	3 cut(s)	920, 1337, 1676
XhoI	CTCGAG	1 cut(s)	52
XmaI	CCCGGG	1 cut(s)	995
XmiI	GTMKAC	2 cut(s)	1825, 2398
XmnI	GAANNNNTTC	3 cut(s)	88, 1122, 2165
XspI	CTAG	9 cut(s)	138, 516, 554, 1445, 1994, 2367, 2414, 2478, 2676
ZrmI	AGTACT	4 cut(s)	365, 1578, 2341, 2835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.