Zinc knuckle (CCHC-type) family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G12880 AT3G43490 AT3G43503 AT3G43590 AT5G36240 |
| fragaria_vesca | FvH4_2g05241 FvH4_2g05241 FvH4_2g05241 FvH4_2g05241 FvH4_2g05241 |
| malus_domestica | MD03G1161300.v1.1 |
| prunus_persica | Prupe.6G179900_v2.0.a1 Prupe.6G179900_v2.0.a1 |
| pyrus_communis | pycom03g11370 pycom11g15120 |
| rosa_chinensis | RchiOBHm_Chr6g0255381 |
| rosa_laevigata | RLG00000003331 RLG00000014842 |
| rosa_multiflora | Rmu_sc0025504.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00210030 |
| rosa_rugosa | Rorug05G0557800 Rorug05G0557800 Rorug05G0557900 Rorug05G0558000.1 |
| rosa_samantha | Rh6AG075400 Rh6BG068200 Rh6CG067900 Rh6DG064500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 117 |
| AfaI | GTAC | 1 cut(s) | 17 |
| AgsI | TTSAA | 1 cut(s) | 149 |
| AluBI | AGCT | 1 cut(s) | 113 |
| AluI | AGCT | 1 cut(s) | 113 |
| Alw26I | GTCTC | 1 cut(s) | 51 |
| AoxI | GGCC | 1 cut(s) | 117 |
| BalI | TGGCCA | 1 cut(s) | 119 |
| BccI | CCATC | 1 cut(s) | 128 |
| BcoDI | GTCTC | 1 cut(s) | 51 |
| BfaI | CTAG | 1 cut(s) | 187 |
| BoxI | GACNNNNGTC | 1 cut(s) | 63 |
| BshFI | GGCC | 1 cut(s) | 119 |
| BsmAI | GTCTC | 1 cut(s) | 51 |
| BsnI | GGCC | 1 cut(s) | 119 |
| BspANI | GGCC | 1 cut(s) | 119 |
| BspHI | TCATGA | 1 cut(s) | 67 |
| Bst4CI | ACNGT | 1 cut(s) | 23 |
| BstMAI | GTCTC | 1 cut(s) | 51 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 63 |
| BsuRI | GGCC | 1 cut(s) | 119 |
| BtsIMutI | CAGTG | 1 cut(s) | 28 |
| CciI | TCATGA | 1 cut(s) | 67 |
| Csp6I | GTAC | 1 cut(s) | 16 |
| CviAII | CATG | 3 cut(s) | 68, 73, 155 |
| CviJI | RGCY | 2 cut(s) | 113, 119 |
| CviKI_1 | RGCY | 2 cut(s) | 113, 119 |
| CviQI | GTAC | 1 cut(s) | 16 |
| EaeI | YGGCCR | 1 cut(s) | 117 |
| FaeI | CATG | 3 cut(s) | 71, 76, 158 |
| FaiI | YATR | 7 cut(s) | 43, 69, 74, 91, 101, 126, 156 |
| FatI | CATG | 3 cut(s) | 67, 72, 154 |
| FspBI | CTAG | 1 cut(s) | 187 |
| HaeIII | GGCC | 1 cut(s) | 119 |
| Hin1II | CATG | 3 cut(s) | 71, 76, 158 |
| HincII | GTYRAC | 1 cut(s) | 184 |
| HindII | GTYRAC | 1 cut(s) | 184 |
| HindIII | AAGCTT | 1 cut(s) | 111 |
| HinfI | GANTC | 1 cut(s) | 145 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 68 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyCH4III | ACNGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 1 cut(s) | 84 |
| Hsp92II | CATG | 3 cut(s) | 71, 76, 158 |
| MaeI | CTAG | 1 cut(s) | 187 |
| MlsI | TGGCCA | 1 cut(s) | 119 |
| MluNI | TGGCCA | 1 cut(s) | 119 |
| Mox20I | TGGCCA | 1 cut(s) | 119 |
| MscI | TGGCCA | 1 cut(s) | 119 |
| MseI | TTAA | 2 cut(s) | 12, 47 |
| Msp20I | TGGCCA | 1 cut(s) | 119 |
| NlaIII | CATG | 3 cut(s) | 71, 76, 158 |
| PagI | TCATGA | 1 cut(s) | 67 |
| PfeI | GAWTC | 1 cut(s) | 145 |
| PshAI | GACNNNNGTC | 1 cut(s) | 63 |
| RsaI | GTAC | 1 cut(s) | 17 |
| RsaNI | GTAC | 1 cut(s) | 16 |
| SaqAI | TTAA | 2 cut(s) | 12, 47 |
| SetI | ASST | 1 cut(s) | 115 |
| SgeI | CNNG | 5 cut(s) | 80, 85, 151, 167, 179 |
| SspMI | CTAG | 1 cut(s) | 187 |
| TaaI | ACNGT | 1 cut(s) | 23 |
| TaqI | TCGA | 1 cut(s) | 134 |
| TatI | WGTACW | 1 cut(s) | 15 |
| TfiI | GAWTC | 1 cut(s) | 145 |
| Tru1I | TTAA | 2 cut(s) | 12, 47 |
| Tru9I | TTAA | 2 cut(s) | 12, 47 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TspRI | CASTG | 1 cut(s) | 28 |
| XspI | CTAG | 1 cut(s) | 187 |