Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008549

Physical Location & Seq

Genomic Coordinates Forward (+)

19143334 .. 19148244

Gene Structure 4911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G51620.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGCTGCGGATCTCGATGATTTGGAAGAAGAGAGTTCTTCCTCATTATCACCACCGCTTCTTCCGCCGCCTCGGTCTCCGTTGAATCAGCCGGAGTTGTGGATGAGAGTTGAGGAAGCAACCCGTGAAATTATAGAGCAGGTTCATCCAACTCTTGTCTCCGAGGATCGACGAAGAGATGTGATTCTATATGTTCAAAAACTTATCAGAATGACACTTGGATGCGAGGTACATTCTTTTGGATCGGTTCCATTGAAAACGTATCTTCCTGATGGAGACATTGATCTCACTGCTTTTGGTGGGCTGTATCATGAGGAAGAACTGGCTGCCAAAGTTTTTGCTGTACTTGAGAGGGAAGAGCATAACTTGTCCTCCCAATTTGTGGTTAAGGATGTGCAGTTAATACGGGCTGAGGTCAAGCTTGTTAAATGTCTGGTGCAAAACATCGTGGTTGATATCTCTTTCAATCAGATTGGTGGGATTTGCACCCTCTGCTTTCTCGAGAAGGTTCTATACAAATTTTTGGACTACTTCAGCAAGTTTGACTGGGATAGCTATTGCATTAGCCTGAATGGTCCTGTCTGCCTTTCCTCTCTACCAGATATTGTTGTTGAGACTCCGGAAAATGGAGGGGAAGATCTTCTGCTGACCAGTGAGTTCCTCAAGGAATGTCTGGAGATGTACTCTGTACCATCACGAGGATTTGAGACAAACCCACGCGGGTTTCAATCAAAGCATCTTAATATAGTCGATCCGCTTAAAGAAACTAACAATCTTGGACGCAGCGTAAGCAAAGGTAACTTTTATCGTATACGAAGTGCATTCACATATGGTGCTCGGAAGCTTGGGCAACTTTTTTTGCAGTCAGATGAAGCCATAAGTTCTGAGCTTCGTAAGTTCTTCTCTAACATGCTACTCAGGCATGGGAGTGGCCAGAGGCCCGATGTCCATGATGCTATTCCATTTTTAAGGTACAACAGGTACAATGCCATATTGCCAGCTTCCAACCATTTCCAAGAAGGCCAAGTGGTTAATGAATCAGAATCCTCCAGTTCGTCTGGTGCTACTGGAAATGGTAGACATGACCAAGAAGACTCGTTGGATGCAGGAGTAAGTATACCGAGTACAACTGGGCCTGATTTAAGTGGATCACCTGGTGAAACAGTGCCTTCGGTTTCAGAGGAACGATTTTCGGGAGACGCAAAAGACTTGGCTACTTTGAGGATCCAAAAGTTAGAGATTTCCGATGATGCAATGAAATCTCCGTGCCTTAGTGATAAGGAAAGTGACTCTCCTTTGAATGGTAAGCATCATTCTTTTAATCAGATGAGAAATGGAGAAGTTTTAAATGGAAACGGGGTGGGGAAACAGCAAGAGAATTCCTGGCATACTGGTTCCAGAAGAGTTAAAGATATACATATTAATGAGAATGAGAATGAGCATGTTGGTTATGAAGACCTGCCATTCGCAAGTGCAGTACCTTGGCCACAGGAGGACATGCATCTCCACTACTCAGGTCATTGTGTTTCTGGCACTCCGAATATGCTGTCTGACCTCTCAGGCGATTACGAGAGTCAGCTTAACAGTTTGCGATTTGGTCGCTGGTGGTTTGATTATGTCCAAAATGGTCCTATGTCTCCACTATCACCTCCTGGGCTGCCTCAGCTGCCGAACAACAATTCATGGGAAGTAATGCGGCATGCTCTGCCATTCAGACGAAATGCGCCCACTCCAGTAAATGCAAATGGAGTTGTTCCGAGACAGGTTTTCTTTCATGTGAACCCTCAGATGATTCCAGGTCCTGGTTTTGGTATCGAGGAATTACCTAAGCCACGAGGAACTGGAACATACTTCCCCAATGCGAACCATTACAGGGATAGACCGTTCTCCCCAAGAGGAAGGAACTCACACCAAGCTAGGTCGCCGCGTAACAATGGCCGAAGCATGTCACAAGCGCACTCAGAAATGAATTTTCCTGACAGAAACACCCGTGAGAGACAGCTTCATTATCCCAACCAAACAAATGGTTCATGCGATATGAGTCACACTGATTCACTTGATAGCTTTCCTGATACCAATGGCTCTACAAATCATCCATATGAAAAGGCTCCAGACTTTAGGCCTACAGAGCCTCTACCAGTGGAAGTACTCTCCCCTCCTGAGGACAGCAAGCCAAGAGATAGCATTGAAGGTCATCATAATCGGCCACATCGTCCAAAACCTAGACCCTCCTCAACACAGGAAGAACGTGATGTACATGTAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

755

Amino Acids

84.74

Weight (kDa)

5.54

Isoelectric Point (pI)

56.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MTPAP-like_central	PF22600	39 - 161	8.4e-08	Poly(A) RNA polymerase, mitochondrial-like, central palm domain
PAP-OAS1	PF26180	174 - 365	3.1e-98	PAP/OAS1 substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008549)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51620 AT3G51620 AT3G51620
fragaria_vesca	FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110
malus_domestica	MD04G1172800.v1.1 MD12G1186100.v1.1
prunus_persica	Prupe.6G291600_v2.0.a1
pyrus_communis	pycom04g15270 pycom12g17470
rosa_chinensis	RchiOBHm_Chr3g0460811
rosa_laevigata	RLG00000024979
rosa_multiflora	Rmu_sc0007678.1_g000014
rosa_roxburghii	Rroxscaffold_6G00419200
rosa_rugosa	Rorug03G0046500
rosa_samantha	Rh3AG103600 Rh3BG107300 Rh3CG109200 Rh3DG109100
rosa_wichuraiana	Rw3G008820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	130, 1467
AccB7I	CCANNNNNTGG	2 cut(s)	382, 1802
AccI	GTMKAC	3 cut(s)	811, 1078, 1117
AccII	CGCG	2 cut(s)	720, 1927
AccIII	TCCGGA	1 cut(s)	619
AciI	CCGC	8 cut(s)	8, 56, 65, 68, 720, 755, 1696, 1925
AclWI	GGATC	7 cut(s)	18, 174, 250, 746, 1156, 1219, 1232
AcoI	YGGCCR	4 cut(s)	931, 1484, 1936, 2204
AcsI	RAATTY	3 cut(s)	518, 1378, 1969
AcuI	CTGAAG	1 cut(s)	517
AdeI	CACNNNGTG	1 cut(s)	1157
AfiI	CCNNNNNNNGG	8 cut(s)	382, 626, 698, 1301, 1802, 1808, 1873, 2161
AflIII	ACRYGT	1 cut(s)	2257
AgsI	TTSAA	7 cut(s)	85, 197, 256, 466, 728, 1300, 2189
AjnI	CCWGG	5 cut(s)	1153, 1382, 1651, 1795, 1801
AloI	GAACNNNNNNTCC	2 cut(s)	1868, 1900
Alw21I	GWGCWC	1 cut(s)	838
Alw26I	GTCTC	9 cut(s)	81, 163, 270, 608, 701, 1191, 1641, 1753, 1990
AlwI	GGATC	7 cut(s)	18, 174, 250, 746, 1156, 1219, 1232
AlwNI	CAGNNNCTG	1 cut(s)	1802
Ama87I	CYCGRG	1 cut(s)	500
Aor13HI	TCCGGA	1 cut(s)	619
AoxI	GGCC	8 cut(s)	931, 938, 1021, 1133, 1484, 1936, 2120, 2204
ApeKI	GCWGC	5 cut(s)	5, 326, 783, 1657, 1666
ApoI	RAATTY	3 cut(s)	518, 1378, 1969
ArsI	GACNNNNNNTTYG	4 cut(s)	1448, 1480, 1532, 1564
AseI	ATTAAT	1 cut(s)	1422
Asp700I	GAANNNNTTC	1 cut(s)	639
AspLEI	GCGC	2 cut(s)	1726, 1957
AspS9I	GGNCC	5 cut(s)	575, 939, 1133, 1628, 1799
AsuHPI	GGTGA	4 cut(s)	42, 1143, 1169, 1638
AvaI	CYCGRG	1 cut(s)	500
AvaII	GGWCC	3 cut(s)	575, 1628, 1799
AxyI	CCTNAGG	1 cut(s)	2160
BalI	TGGCCA	2 cut(s)	933, 1486
BamHI	GGATCC	1 cut(s)	1224
BarI	GAAGNNNNNNTAC	2 cut(s)	497, 529
BauI	CACGAG	2 cut(s)	696, 1833
BbsI	GAAGAC	2 cut(s)	1098, 1461
Bbv12I	GWGCWC	1 cut(s)	838
BbvCI	CCTCAGC	2 cut(s)	411, 1662
BbvI	GCAGC	4 cut(s)	313, 795, 1644, 1653
BccI	CCATC	2 cut(s)	266, 700
BciT130I	CCWGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
BcoDI	GTCTC	9 cut(s)	81, 163, 270, 608, 701, 1191, 1641, 1753, 1990
BfaI	CTAG	2 cut(s)	1917, 2223
BfmI	CTRYAG	1 cut(s)	2124
BfuAI	ACCTGC	2 cut(s)	130, 1467
BglII	AGATCT	1 cut(s)	637
BisI	GCNGC	8 cut(s)	6, 68, 327, 784, 1658, 1667, 1697, 1925
BlsI	GCNGC	8 cut(s)	7, 69, 328, 785, 1659, 1668, 1698, 1926
BmcAI	AGTACT	1 cut(s)	2148
Bme1390I	CCNGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
Bme18I	GGWCC	3 cut(s)	575, 1628, 1799
BmeT110I	CYCGRG	1 cut(s)	500
BmgT120I	GGNCC	5 cut(s)	575, 939, 1133, 1628, 1799
BmiI	GGNNCC	4 cut(s)	249, 1226, 1396, 2109
BmrFI	CCNGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
BmrI	ACTGGG	2 cut(s)	556, 1140
BmsI	GCATC	7 cut(s)	212, 745, 943, 1093, 1240, 1318, 1510
BmuI	ACTGGG	2 cut(s)	556, 1140
BpiI	GAAGAC	2 cut(s)	1098, 1461
BplI	GAGNNNNNCTC	2 cut(s)	668, 700
BpmI	CTGGAG	4 cut(s)	695, 1033, 1716, 2094
Bpu10I	CCTNAGC	3 cut(s)	411, 1662, 1827
BpuEI	CTTGAG	2 cut(s)	368, 647
BsaI	GGTCTC	1 cut(s)	81
BsaJI	CCNNGG	4 cut(s)	71, 162, 1481, 1652
BsaWI	WCCGGW	1 cut(s)	619
BsaXI	ACNNNNNCTCC	2 cut(s)	356, 386
Bsc4I	CCNNNNNNNGG	8 cut(s)	382, 626, 698, 1301, 1802, 1808, 1873, 2161
Bse21I	CCTNAGG	1 cut(s)	2160
Bse3DI	GCAATG	1 cut(s)	1260
BseAI	TCCGGA	1 cut(s)	619
BseBI	CCWGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
BseDI	CCNNGG	4 cut(s)	71, 162, 1481, 1652
BseGI	GGATG	6 cut(s)	108, 145, 227, 397, 1108, 2092
BseLI	CCNNNNNNNGG	8 cut(s)	382, 626, 698, 1301, 1802, 1808, 1873, 2161
BseMI	GCAATG	1 cut(s)	1260
BseMII	CTCAG	9 cut(s)	402, 876, 931, 1527, 1572, 1676, 1799, 1974, 2151
BseRI	GAGGAG	1 cut(s)	2221
BseXI	GCAGC	4 cut(s)	313, 795, 1644, 1653
BsgI	GTGCAG	2 cut(s)	416, 1494
Bsh1236I	CGCG	2 cut(s)	720, 1927
BshFI	GGCC	8 cut(s)	933, 940, 1023, 1135, 1486, 1938, 2122, 2206
BsiHKAI	GWGCWC	1 cut(s)	838
BsiHKCI	CYCGRG	1 cut(s)	500
BsiSI	CCGG	2 cut(s)	92, 620
BslI	CCNNNNNNNGG	8 cut(s)	382, 626, 698, 1301, 1802, 1808, 1873, 2161
BsmAI	GTCTC	9 cut(s)	81, 163, 270, 608, 701, 1191, 1641, 1753, 1990
BsmBI	CGTCTC	1 cut(s)	1191
BsmI	GAATGC	1 cut(s)	821
BsnI	GGCC	8 cut(s)	933, 940, 1023, 1135, 1486, 1938, 2122, 2206
Bso31I	GGTCTC	1 cut(s)	81
BsoBI	CYCGRG	1 cut(s)	500
Bsp1286I	GDGCHC	1 cut(s)	838
Bsp13I	TCCGGA	1 cut(s)	619
Bsp1407I	TGTACA	1 cut(s)	2254
Bsp143I	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
BspACI	CCGC	8 cut(s)	8, 56, 65, 68, 720, 755, 1696, 1925
BspANI	GGCC	8 cut(s)	933, 940, 1023, 1135, 1486, 1938, 2122, 2206
BspCNI	CTCAG	9 cut(s)	403, 877, 930, 1526, 1571, 1675, 1798, 1973, 2152
BspEI	TCCGGA	1 cut(s)	619
BspFNI	CGCG	2 cut(s)	720, 1927
BspHI	TCATGA	1 cut(s)	310
BspLI	GGNNCC	4 cut(s)	249, 1226, 1396, 2109
BspMI	ACCTGC	2 cut(s)	130, 1467
BspPI	GGATC	7 cut(s)	18, 174, 250, 746, 1156, 1219, 1232
BspQI	GCTCTTC	1 cut(s)	351
BspTNI	GGTCTC	1 cut(s)	81
BsrDI	GCAATG	1 cut(s)	1260
BsrGI	TGTACA	1 cut(s)	2254
BssECI	CCNNGG	4 cut(s)	71, 162, 1481, 1652
BssMI	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
BssNAI	GTATAC	2 cut(s)	812, 1118
BssSI	CACGAG	2 cut(s)	696, 1833
BssT1I	CCWWGG	1 cut(s)	1481
Bst1107I	GTATAC	2 cut(s)	812, 1118
Bst2BI	CACGAG	2 cut(s)	696, 1833
Bst2UI	CCWGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
Bst4CI	ACNGT	3 cut(s)	1165, 1586, 1884
Bst6I	CTCTTC	4 cut(s)	24, 169, 351, 1396
BstAPI	GCANNNNNTGC	2 cut(s)	492, 1705
BstAUI	TGTACA	1 cut(s)	2254
BstC8I	GCNNGC	3 cut(s)	999, 1701, 2171
BstF5I	GGATG	6 cut(s)	108, 145, 227, 397, 1108, 2092
BstFNI	CGCG	2 cut(s)	720, 1927
BstHHI	GCGC	2 cut(s)	1726, 1957
BstKTI	GATC	8 cut(s)	13, 169, 245, 286, 640, 754, 1151, 1227
BstMAI	GTCTC	9 cut(s)	81, 163, 270, 608, 701, 1191, 1641, 1753, 1990
BstMBI	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
BstMWI	GCNNNNNNNGC	8 cut(s)	64, 492, 789, 919, 1663, 1666, 1705, 2128
BstNI	CCWGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
BstNSI	RCATGY	6 cut(s)	913, 1445, 1501, 1703, 1948, 2261
BstSCI	CCNGG	5 cut(s)	1153, 1382, 1651, 1795, 1801
BstSFI	CTRYAG	1 cut(s)	2124
BstUI	CGCG	2 cut(s)	720, 1927
BstV1I	GCAGC	4 cut(s)	313, 795, 1644, 1653
BstV2I	GAAGAC	2 cut(s)	1098, 1461
BstX2I	RGATCY	3 cut(s)	10, 637, 1224
BstXI	CCANNNNNNTGG	1 cut(s)	2024
BstYI	RGATCY	3 cut(s)	10, 637, 1224
BstZ17I	GTATAC	2 cut(s)	812, 1118
Bsu36I	CCTNAGG	1 cut(s)	2160
BsuRI	GGCC	8 cut(s)	933, 940, 1023, 1135, 1486, 1938, 2122, 2206
BtsCI	GGATG	6 cut(s)	108, 145, 227, 397, 1108, 2092
BtsI	GCAGTG	1 cut(s)	288
BtsIMutI	CAGTG	5 cut(s)	288, 658, 1170, 2046, 2145
BveI	ACCTGC	2 cut(s)	130, 1467
Cac8I	GCNNGC	3 cut(s)	999, 1701, 2171
CaiI	CAGNNNCTG	1 cut(s)	1802
CciI	TCATGA	1 cut(s)	310
CfoI	GCGC	2 cut(s)	1726, 1957
Cfr13I	GGNCC	5 cut(s)	575, 939, 1133, 1628, 1799
CseI	GACGC	2 cut(s)	789, 1208
CsiI	ACCWGGT	1 cut(s)	1153
DpnI	GATC	8 cut(s)	12, 168, 244, 285, 639, 753, 1150, 1226
DpnII	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
DraI	TTTAAA	1 cut(s)	1347
DraIII	CACNNNGTG	1 cut(s)	1157
EaeI	YGGCCR	4 cut(s)	931, 1484, 1936, 2204
Eam1104I	CTCTTC	4 cut(s)	24, 169, 351, 1396
EarI	CTCTTC	4 cut(s)	24, 169, 351, 1396
EciI	GGCGGA	1 cut(s)	54
Eco130I	CCWWGG	1 cut(s)	1481
Eco147I	AGGCCT	1 cut(s)	2122
Eco31I	GGTCTC	1 cut(s)	81
Eco32I	GATATC	1 cut(s)	457
Eco47I	GGWCC	3 cut(s)	575, 1628, 1799
Eco57I	CTGAAG	1 cut(s)	517
Eco81I	CCTNAGG	1 cut(s)	2160
Eco88I	CYCGRG	1 cut(s)	500
EcoO109I	RGGNCCY	1 cut(s)	1799
EcoRI	GAATTC	1 cut(s)	1378
EcoRII	CCWGG	5 cut(s)	1153, 1382, 1651, 1795, 1801
EcoRV	GATATC	1 cut(s)	457
EcoT14I	CCWWGG	1 cut(s)	1481
EcoT22I	ATGCAT	1 cut(s)	1503
ErhI	CCWWGG	1 cut(s)	1481
Esp3I	CGTCTC	1 cut(s)	1191
FauI	CCCGC	1 cut(s)	713
FauNDI	CATATG	2 cut(s)	829, 2098
FblI	GTMKAC	3 cut(s)	811, 1078, 1117
Fnu4HI	GCNGC	8 cut(s)	6, 68, 327, 784, 1658, 1667, 1697, 1925
FokI	GGATG	6 cut(s)	115, 132, 234, 404, 1115, 2079
Fsp4HI	GCNGC	8 cut(s)	6, 68, 327, 784, 1658, 1667, 1697, 1925
FspBI	CTAG	2 cut(s)	1917, 2223
GlaI	GCGC	2 cut(s)	1725, 1956
GluI	GCNGC	8 cut(s)	6, 68, 327, 784, 1658, 1667, 1697, 1925
GsuI	CTGGAG	4 cut(s)	695, 1033, 1716, 2094
HaeIII	GGCC	8 cut(s)	933, 940, 1023, 1135, 1486, 1938, 2122, 2206
HapII	CCGG	2 cut(s)	92, 620
HgaI	GACGC	2 cut(s)	789, 1208
HhaI	GCGC	2 cut(s)	1726, 1957
Hin6I	GCGC	2 cut(s)	1724, 1955
HinP1I	GCGC	2 cut(s)	1724, 1955
HindIII	AAGCTT	2 cut(s)	419, 842
HpaII	CCGG	2 cut(s)	92, 620
HphI	GGTGA	4 cut(s)	42, 1143, 1169, 1638
Hpy166II	GTNNAC	4 cut(s)	812, 1079, 1118, 1780
Hpy8I	GTNNAC	4 cut(s)	812, 1079, 1118, 1780
Hpy99I	CGWCG	1 cut(s)	174
HpyAV	CCTTC	5 cut(s)	499, 1013, 1179, 1893, 2183
HpyCH4III	ACNGT	3 cut(s)	1165, 1586, 1884
HpyCH4IV	ACGT	2 cut(s)	260, 2248
HpyF10VI	GCNNNNNNNGC	8 cut(s)	64, 492, 789, 919, 1663, 1666, 1705, 2128
HpySE526I	ACGT	2 cut(s)	260, 2248
HspAI	GCGC	2 cut(s)	1724, 1955
Kpn2I	TCCGGA	1 cut(s)	619
Kzo9I	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
LguI	GCTCTTC	1 cut(s)	351
LmnI	GCTCC	1 cut(s)	2113
Lsp1109I	GCAGC	4 cut(s)	313, 795, 1644, 1653
LweI	GCATC	7 cut(s)	212, 745, 943, 1093, 1240, 1318, 1510
MabI	ACCWGGT	1 cut(s)	1153
MaeI	CTAG	2 cut(s)	1917, 2223
MaeII	ACGT	2 cut(s)	260, 2248
MaeIII	GTNAC	5 cut(s)	797, 1286, 1928, 1947, 2042
MalI	GATC	8 cut(s)	12, 168, 244, 285, 639, 753, 1150, 1226
MboI	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
MflI	RGATCY	3 cut(s)	10, 637, 1224
MhlI	GDGCHC	1 cut(s)	838
MlsI	TGGCCA	2 cut(s)	933, 1486
MluCI	AATT	7 cut(s)	129, 377, 518, 1378, 1678, 1820, 1969
MluNI	TGGCCA	2 cut(s)	933, 1486
MlyI	GAGTC	5 cut(s)	610, 1088, 1283, 1582, 2050
MmeI	TCCRAC	3 cut(s)	173, 1029, 1080
Mox20I	TGGCCA	2 cut(s)	933, 1486
Mph1103I	ATGCAT	1 cut(s)	1503
MroI	TCCGGA	1 cut(s)	619
MroXI	GAANNNNTTC	1 cut(s)	639
MscI	TGGCCA	2 cut(s)	933, 1486
MslI	CAYNNNNRTG	4 cut(s)	220, 927, 1422, 2097
Msp20I	TGGCCA	2 cut(s)	933, 1486
MspA1I	CMGCKG	1 cut(s)	1666
MspI	CCGG	2 cut(s)	92, 620
MspR9I	CCNGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
Mva1269I	GAATGC	1 cut(s)	821
MvaI	CCWGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
MvnI	CGCG	2 cut(s)	720, 1927
MwoI	GCNNNNNNNGC	8 cut(s)	64, 492, 789, 919, 1663, 1666, 1705, 2128
NdeI	CATATG	2 cut(s)	829, 2098
NdeII	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
NlaIV	GGNNCC	4 cut(s)	249, 1226, 1396, 2109
NmuCI	GTSAC	3 cut(s)	1286, 1947, 2042
NsiI	ATGCAT	1 cut(s)	1503
NspI	RCATGY	6 cut(s)	913, 1445, 1501, 1703, 1948, 2261
PaeI	GCATGC	1 cut(s)	1703
PaeR7I	CTCGAG	1 cut(s)	500
PagI	TCATGA	1 cut(s)	310
PceI	AGGCCT	1 cut(s)	2122
PciI	ACATGT	1 cut(s)	2257
PciSI	GCTCTTC	1 cut(s)	351
PcsI	WCGNNNNNNNCGW	1 cut(s)	2209
PctI	GAATGC	1 cut(s)	821
PdmI	GAANNNNTTC	1 cut(s)	639
PfeI	GAWTC	6 cut(s)	85, 184, 1037, 1043, 1792, 2051
PflMI	CCANNNNNTGG	2 cut(s)	382, 1802
PkrI	GCNGC	8 cut(s)	7, 69, 328, 785, 1659, 1668, 1698, 1926
PleI	GAGTC	5 cut(s)	610, 1088, 1283, 1581, 2049
PpsI	GAGTC	5 cut(s)	610, 1088, 1283, 1581, 2049
PpuMI	RGGWCCY	1 cut(s)	1799
PscI	ACATGT	1 cut(s)	2257
PshBI	ATTAAT	1 cut(s)	1422
Psp5II	RGGWCCY	1 cut(s)	1799
Psp6I	CCWGG	5 cut(s)	1153, 1382, 1651, 1795, 1801
PspGI	CCWGG	5 cut(s)	1153, 1382, 1651, 1795, 1801
PspN4I	GGNNCC	4 cut(s)	249, 1226, 1396, 2109
PspPI	GGNCC	5 cut(s)	575, 939, 1133, 1628, 1799
PspPPI	RGGWCCY	1 cut(s)	1799
PsrI	GAACNNNNNNTAC	1 cut(s)	2238
PstNI	CAGNNNCTG	1 cut(s)	1802
PsuI	RGATCY	3 cut(s)	10, 637, 1224
PvuII	CAGCTG	1 cut(s)	1666
RseI	CAYNNNNRTG	4 cut(s)	220, 927, 1422, 2097
SapI	GCTCTTC	1 cut(s)	351
SatI	GCNGC	8 cut(s)	6, 68, 327, 784, 1658, 1667, 1697, 1925
Sau3AI	GATC	8 cut(s)	10, 166, 242, 283, 637, 751, 1148, 1224
Sau96I	GGNCC	5 cut(s)	575, 939, 1133, 1628, 1799
ScaI	AGTACT	1 cut(s)	2148
SchI	GAGTC	5 cut(s)	610, 1088, 1283, 1582, 2050
ScrFI	CCNGG	5 cut(s)	1155, 1384, 1653, 1797, 1803
SduI	GDGCHC	1 cut(s)	838
SexAI	ACCWGGT	1 cut(s)	1153
SfaNI	GCATC	7 cut(s)	212, 745, 943, 1093, 1240, 1318, 1510
SfcI	CTRYAG	1 cut(s)	2124
Sfr274I	CTCGAG	1 cut(s)	500
SinI	GGWCC	3 cut(s)	575, 1628, 1799
SlaI	CTCGAG	1 cut(s)	500
SmiMI	CAYNNNNRTG	4 cut(s)	220, 927, 1422, 2097
SmlI	CTYRAG	3 cut(s)	347, 500, 662
SmoI	CTYRAG	3 cut(s)	347, 500, 662
SphI	GCATGC	1 cut(s)	1703
Sse9I	AATT	7 cut(s)	129, 377, 518, 1378, 1678, 1820, 1969
SseBI	AGGCCT	1 cut(s)	2122
SsiI	CCGC	8 cut(s)	8, 56, 65, 68, 720, 755, 1696, 1925
SspMI	CTAG	2 cut(s)	1917, 2223
StuI	AGGCCT	1 cut(s)	2122
StyD4I	CCNGG	5 cut(s)	1153, 1382, 1651, 1795, 1801
StyI	CCWWGG	1 cut(s)	1481
TaaI	ACNGT	3 cut(s)	1165, 1586, 1884
TaiI	ACGT	2 cut(s)	263, 2251
TaqI	TCGA	5 cut(s)	15, 169, 501, 750, 1815
TaqII	GACCGA	1 cut(s)	63
TasI	AATT	7 cut(s)	129, 377, 518, 1378, 1678, 1820, 1969
TatI	WGTACW	5 cut(s)	343, 681, 1124, 2146, 2254
TauI	GCSGC	3 cut(s)	70, 1699, 1927
TfiI	GAWTC	6 cut(s)	85, 184, 1037, 1043, 1792, 2051
TscAI	CASTG	5 cut(s)	295, 658, 1170, 2053, 2145
TseFI	GTSAC	3 cut(s)	1286, 1947, 2042
TseI	GCWGC	5 cut(s)	5, 326, 783, 1657, 1666
Tsp45I	GTSAC	3 cut(s)	1286, 1947, 2042
TspGWI	ACGGA	2 cut(s)	69, 1254
TspRI	CASTG	5 cut(s)	295, 658, 1170, 2053, 2145
Van91I	CCANNNNNTGG	2 cut(s)	382, 1802
VpaK11BI	GGWCC	3 cut(s)	575, 1628, 1799
VspI	ATTAAT	1 cut(s)	1422
XapI	RAATTY	3 cut(s)	518, 1378, 1969
XceI	RCATGY	6 cut(s)	913, 1445, 1501, 1703, 1948, 2261
XhoI	CTCGAG	1 cut(s)	500
XmiI	GTMKAC	3 cut(s)	811, 1078, 1117
XmnI	GAANNNNTTC	1 cut(s)	639
XspI	CTAG	2 cut(s)	1917, 2223
ZrmI	AGTACT	1 cut(s)	2148
Zsp2I	ATGCAT	1 cut(s)	1503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.