isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51620 AT3G51620 AT3G51620 |
| fragaria_vesca | FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 |
| malus_domestica | MD04G1172800.v1.1 MD12G1186100.v1.1 |
| prunus_persica | Prupe.6G291600_v2.0.a1 |
| pyrus_communis | pycom04g15270 pycom12g17470 |
| rosa_chinensis | RchiOBHm_Chr3g0460811 |
| rosa_laevigata | RLG00000024979 |
| rosa_multiflora | Rmu_sc0007678.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00419200 |
| rosa_rugosa | Rorug03G0046500 |
| rosa_samantha | Rh3AG103600 Rh3BG107300 Rh3CG109200 Rh3DG109100 |
| rosa_wichuraiana | Rw3G008820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1947 |
| AarI | CACCTGC | 1 cut(s) | 205 |
| Acc36I | ACCTGC | 3 cut(s) | 205, 577, 2584 |
| Acc65I | GGTACC | 1 cut(s) | 1922 |
| AccB1I | GGYRCC | 4 cut(s) | 38, 677, 1922, 2053 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 890 |
| AclWI | GGATC | 5 cut(s) | 1010, 1147, 1211, 1846, 2699 |
| AcoI | YGGCCR | 3 cut(s) | 399, 1042, 2350 |
| AcsI | RAATTY | 4 cut(s) | 425, 782, 803, 2540 |
| AcuI | CTGAAG | 3 cut(s) | 1728, 2355, 2442 |
| AcyI | GRCGYC | 4 cut(s) | 39, 881, 1546, 2054 |
| AfaI | GTAC | 7 cut(s) | 173, 324, 1273, 1474, 1668, 1924, 2493 |
| AfeI | AGCGCT | 1 cut(s) | 166 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 586, 890, 962, 1403, 2484, 2569, 2570, 2582 |
| AflIII | ACRYGT | 1 cut(s) | 231 |
| AgsI | TTSAA | 9 cut(s) | 425, 547, 757, 960, 992, 1605, 2287, 2514, 2716 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2638 |
| AjiI | CACGTC | 1 cut(s) | 232 |
| AjnI | CCWGG | 3 cut(s) | 647, 1396, 1788 |
| AleI | CACNNNNGTG | 1 cut(s) | 230 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2251, 2283 |
| Alw21I | GWGCWC | 3 cut(s) | 1102, 1390, 2070 |
| Alw26I | GTCTC | 6 cut(s) | 707, 872, 965, 1128, 2340, 2430 |
| Alw44I | GTGCAC | 1 cut(s) | 2066 |
| AlwI | GGATC | 5 cut(s) | 1010, 1147, 1211, 1846, 2699 |
| Aor51HI | AGCGCT | 1 cut(s) | 166 |
| AoxI | GGCC | 8 cut(s) | 399, 645, 1042, 1202, 2171, 2294, 2350, 2745 |
| ApaLI | GTGCAC | 1 cut(s) | 2066 |
| ApeKI | GCWGC | 6 cut(s) | 134, 220, 452, 2119, 2128, 2696 |
| ApoI | RAATTY | 4 cut(s) | 425, 782, 803, 2540 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 691, 723 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2282 |
| Asp718I | GGTACC | 1 cut(s) | 1922 |
| AspA2I | CCTAGG | 1 cut(s) | 2168 |
| AspLEI | GCGC | 8 cut(s) | 41, 151, 167, 214, 397, 416, 1116, 2056 |
| AspS9I | GGNCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| AsuHPI | GGTGA | 5 cut(s) | 84, 478, 911, 1385, 2634 |
| AvaII | GGWCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| AvrII | CCTAGG | 1 cut(s) | 2168 |
| BaeGI | GKGCMC | 2 cut(s) | 682, 2070 |
| BalI | TGGCCA | 2 cut(s) | 401, 2352 |
| BanI | GGYRCC | 4 cut(s) | 38, 677, 1922, 2053 |
| BauI | CACGAG | 1 cut(s) | 2247 |
| BbsI | GAAGAC | 1 cut(s) | 2448 |
| Bbv12I | GWGCWC | 3 cut(s) | 1102, 1390, 2070 |
| BbvCI | CCTCAGC | 1 cut(s) | 2330 |
| BbvI | GCAGC | 6 cut(s) | 121, 232, 439, 2131, 2140, 2683 |
| BccI | CCATC | 8 cut(s) | 341, 621, 690, 1235, 1706, 1834, 1857, 2374 |
| BceAI | ACGGC | 5 cut(s) | 26, 52, 171, 1243, 1612 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 575, 609 |
| BciT130I | CCWGG | 3 cut(s) | 649, 1398, 1790 |
| BclI | TGATCA | 1 cut(s) | 1441 |
| BcoDI | GTCTC | 6 cut(s) | 707, 872, 965, 1128, 2340, 2430 |
| BfaI | CTAG | 7 cut(s) | 767, 1323, 1413, 1899, 1997, 2169, 2481 |
| BfoI | RGCGCY | 4 cut(s) | 42, 168, 398, 2057 |
| BfuAI | ACCTGC | 3 cut(s) | 205, 577, 2584 |
| BglII | AGATCT | 1 cut(s) | 1960 |
| BisI | GCNGC | 9 cut(s) | 126, 129, 132, 135, 221, 453, 2120, 2129, 2697 |
| BlnI | CCTAGG | 1 cut(s) | 2168 |
| BlsI | GCNGC | 9 cut(s) | 127, 130, 133, 136, 222, 454, 2121, 2130, 2698 |
| BmcAI | AGTACT | 1 cut(s) | 173 |
| Bme1390I | CCNGG | 3 cut(s) | 649, 1398, 1790 |
| Bme18I | GGWCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2638 |
| BmgBI | CACGTC | 1 cut(s) | 232 |
| BmgT120I | GGNCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| BmiI | GGNNCC | 7 cut(s) | 40, 679, 1924, 2055, 2254, 2476, 2574 |
| BmrFI | CCNGG | 3 cut(s) | 649, 1398, 1790 |
| BmrI | ACTGGG | 1 cut(s) | 1118 |
| BmsI | GCATC | 7 cut(s) | 1009, 1493, 1549, 1600, 2089, 2566, 2640 |
| BmuI | ACTGGG | 1 cut(s) | 1118 |
| BpiI | GAAGAC | 1 cut(s) | 2448 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1636, 1668 |
| BpmI | CTGGAG | 1 cut(s) | 1564 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2123, 2330 |
| BpuEI | CTTGAG | 4 cut(s) | 602, 853, 911, 2608 |
| Bsa29I | ATCGAT | 1 cut(s) | 261 |
| BsaAI | YACGTR | 1 cut(s) | 1991 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1797 |
| BsaHI | GRCGYC | 4 cut(s) | 39, 881, 1546, 2054 |
| BsaI | GGTCTC | 1 cut(s) | 2340 |
| BsaJI | CCNNGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| BsaWI | WCCGGW | 1 cut(s) | 2255 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 586, 890, 962, 1403, 2484, 2569, 2570, 2582 |
| Bse1I | ACTGG | 4 cut(s) | 179, 478, 1113, 1632 |
| Bse3DI | GCAATG | 2 cut(s) | 1732, 2556 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1797 |
| BseBI | CCWGG | 3 cut(s) | 649, 1398, 1790 |
| BseCI | ATCGAT | 1 cut(s) | 261 |
| BseDI | CCNNGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| BseGI | GGATG | 8 cut(s) | 938, 1484, 1564, 1798, 1849, 2104, 2557, 2655 |
| BseJI | GATNNNNATC | 1 cut(s) | 1797 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 586, 890, 962, 1403, 2484, 2569, 2570, 2582 |
| BseMI | GCAATG | 2 cut(s) | 1732, 2556 |
| BseNI | ACTGG | 4 cut(s) | 179, 478, 1113, 1632 |
| BseRI | GAGGAG | 6 cut(s) | 65, 203, 256, 259, 404, 2246 |
| BseSI | GKGCMC | 2 cut(s) | 682, 2070 |
| BseXI | GCAGC | 6 cut(s) | 121, 232, 439, 2131, 2140, 2683 |
| BseYI | CCCAGC | 1 cut(s) | 2450 |
| BsgI | GTGCAG | 3 cut(s) | 239, 2138, 2682 |
| BshFI | GGCC | 8 cut(s) | 401, 647, 1044, 1204, 2173, 2296, 2352, 2747 |
| BshNI | GGYRCC | 4 cut(s) | 38, 677, 1922, 2053 |
| BshVI | ATCGAT | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1102, 1390, 2070 |
| BsiSI | CCGG | 2 cut(s) | 667, 2256 |
| BslFI | GGGAC | 5 cut(s) | 827, 1730, 1920, 2150, 2586 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 586, 890, 962, 1403, 2484, 2569, 2570, 2582 |
| BsmAI | GTCTC | 6 cut(s) | 707, 872, 965, 1128, 2340, 2430 |
| BsmBI | CGTCTC | 1 cut(s) | 872 |
| BsmFI | GGGAC | 5 cut(s) | 827, 1730, 1920, 2150, 2586 |
| BsmI | GAATGC | 1 cut(s) | 1116 |
| BsnI | GGCC | 8 cut(s) | 401, 647, 1044, 1204, 2173, 2296, 2352, 2747 |
| Bso31I | GGTCTC | 1 cut(s) | 2340 |
| Bsp1286I | GDGCHC | 4 cut(s) | 682, 1102, 1390, 2070 |
| Bsp19I | CCATGG | 3 cut(s) | 1226, 2049, 2093 |
| BspANI | GGCC | 8 cut(s) | 401, 647, 1044, 1204, 2173, 2296, 2352, 2747 |
| BspDI | ATCGAT | 1 cut(s) | 261 |
| BspHI | TCATGA | 1 cut(s) | 1354 |
| BspLI | GGNNCC | 7 cut(s) | 40, 679, 1924, 2055, 2254, 2476, 2574 |
| BspMI | ACCTGC | 3 cut(s) | 205, 577, 2584 |
| BspPI | GGATC | 5 cut(s) | 1010, 1147, 1211, 1846, 2699 |
| BspT107I | GGYRCC | 4 cut(s) | 38, 677, 1922, 2053 |
| BspTNI | GGTCTC | 1 cut(s) | 2340 |
| BsrDI | GCAATG | 2 cut(s) | 1732, 2556 |
| BsrI | ACTGG | 4 cut(s) | 179, 478, 1113, 1632 |
| BssECI | CCNNGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| BssNI | GRCGYC | 4 cut(s) | 39, 881, 1546, 2054 |
| BssSI | CACGAG | 1 cut(s) | 2247 |
| BssT1I | CCWWGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| Bst2BI | CACGAG | 1 cut(s) | 2247 |
| Bst2UI | CCWGG | 3 cut(s) | 649, 1398, 1790 |
| Bst4CI | ACNGT | 7 cut(s) | 1514, 1860, 1952, 2024, 2076, 2703, 2711 |
| Bst6I | CTCTTC | 4 cut(s) | 746, 864, 1500, 2433 |
| BstACI | GRCGYC | 4 cut(s) | 39, 881, 1546, 2054 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 573 |
| BstBAI | YACGTR | 1 cut(s) | 1991 |
| BstC8I | GCNNGC | 4 cut(s) | 399, 1674, 2133, 2602 |
| BstDSI | CCRYGG | 3 cut(s) | 1226, 2049, 2093 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 584, 960, 1401 |
| BstF5I | GGATG | 8 cut(s) | 938, 1484, 1564, 1798, 1849, 2104, 2557, 2655 |
| BstH2I | RGCGCY | 4 cut(s) | 42, 168, 398, 2057 |
| BstHHI | GCGC | 8 cut(s) | 41, 151, 167, 214, 397, 416, 1116, 2056 |
| BstMAI | GTCTC | 6 cut(s) | 707, 872, 965, 1128, 2340, 2430 |
| BstNI | CCWGG | 3 cut(s) | 649, 1398, 1790 |
| BstNSI | RCATGY | 2 cut(s) | 1676, 2135 |
| BstSCI | CCNGG | 3 cut(s) | 647, 1396, 1788 |
| BstSLI | GKGCMC | 2 cut(s) | 682, 2070 |
| BstSNI | TACGTA | 1 cut(s) | 1991 |
| BstV1I | GCAGC | 6 cut(s) | 121, 232, 439, 2131, 2140, 2683 |
| BstV2I | GAAGAC | 1 cut(s) | 2448 |
| BstX2I | RGATCY | 4 cut(s) | 1152, 1216, 1838, 1960 |
| BstYI | RGATCY | 4 cut(s) | 1152, 1216, 1838, 1960 |
| Bsu15I | ATCGAT | 1 cut(s) | 261 |
| BsuRI | GGCC | 8 cut(s) | 401, 647, 1044, 1204, 2173, 2296, 2352, 2747 |
| BsuTUI | ATCGAT | 1 cut(s) | 261 |
| BtgI | CCRYGG | 3 cut(s) | 1226, 2049, 2093 |
| BtrI | CACGTC | 1 cut(s) | 232 |
| BtsCI | GGATG | 8 cut(s) | 938, 1484, 1564, 1798, 1849, 2104, 2557, 2655 |
| BtsI | GCAGTG | 1 cut(s) | 2635 |
| BtsIMutI | CAGTG | 2 cut(s) | 225, 2635 |
| BveI | ACCTGC | 3 cut(s) | 205, 577, 2584 |
| Cac8I | GCNNGC | 4 cut(s) | 399, 1674, 2133, 2602 |
| CciI | TCATGA | 1 cut(s) | 1354 |
| CfoI | GCGC | 8 cut(s) | 41, 151, 167, 214, 397, 416, 1116, 2056 |
| Cfr13I | GGNCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| ClaI | ATCGAT | 1 cut(s) | 261 |
| CseI | GACGC | 3 cut(s) | 205, 889, 1535 |
| CsiI | ACCWGGT | 1 cut(s) | 1396 |
| Csp6I | GTAC | 7 cut(s) | 172, 323, 1272, 1473, 1667, 1923, 2492 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2184, 2219 |
| CviQI | GTAC | 7 cut(s) | 172, 323, 1272, 1473, 1667, 1923, 2492 |
| DinI | GGCGCC | 2 cut(s) | 40, 2055 |
| DraI | TTTAAA | 1 cut(s) | 622 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2638 |
| EaeI | YGGCCR | 3 cut(s) | 399, 1042, 2350 |
| Eam1104I | CTCTTC | 4 cut(s) | 746, 864, 1500, 2433 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2638 |
| EarI | CTCTTC | 4 cut(s) | 746, 864, 1500, 2433 |
| EciI | GGCGGA | 1 cut(s) | 200 |
| Eco105I | TACGTA | 1 cut(s) | 1991 |
| Eco130I | CCWWGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| Eco147I | AGGCCT | 3 cut(s) | 647, 1204, 2296 |
| Eco31I | GGTCTC | 1 cut(s) | 2340 |
| Eco47I | GGWCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| Eco47III | AGCGCT | 1 cut(s) | 166 |
| Eco57I | CTGAAG | 3 cut(s) | 1728, 2355, 2442 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 584, 960, 1401 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2573 |
| EcoRII | CCWGG | 3 cut(s) | 647, 1396, 1788 |
| EcoT14I | CCWWGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| EcoT22I | ATGCAT | 1 cut(s) | 2137 |
| EgeI | GGCGCC | 2 cut(s) | 40, 2055 |
| EheI | GGCGCC | 2 cut(s) | 40, 2055 |
| ErhI | CCWWGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| Esp3I | CGTCTC | 1 cut(s) | 872 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 600, 632, 1069, 1101 |
| FaqI | GGGAC | 5 cut(s) | 827, 1730, 1920, 2150, 2586 |
| FauI | CCCGC | 1 cut(s) | 2476 |
| FauNDI | CATATG | 3 cut(s) | 703, 1093, 2145 |
| FbaI | TGATCA | 1 cut(s) | 1441 |
| Fnu4HI | GCNGC | 9 cut(s) | 126, 129, 132, 135, 221, 453, 2120, 2129, 2697 |
| FokI | GGATG | 8 cut(s) | 945, 1471, 1571, 1805, 1836, 2111, 2544, 2662 |
| Fsp4HI | GCNGC | 9 cut(s) | 126, 129, 132, 135, 221, 453, 2120, 2129, 2697 |
| FspBI | CTAG | 7 cut(s) | 767, 1323, 1413, 1899, 1997, 2169, 2481 |
| GlaI | GCGC | 8 cut(s) | 40, 150, 166, 213, 396, 415, 1115, 2055 |
| GluI | GCNGC | 9 cut(s) | 126, 129, 132, 135, 221, 453, 2120, 2129, 2697 |
| GsaI | CCCAGC | 1 cut(s) | 2454 |
| GsuI | CTGGAG | 1 cut(s) | 1564 |
| HaeII | RGCGCY | 4 cut(s) | 42, 168, 398, 2057 |
| HaeIII | GGCC | 8 cut(s) | 401, 647, 1044, 1204, 2173, 2296, 2352, 2747 |
| HapII | CCGG | 2 cut(s) | 667, 2256 |
| HgaI | GACGC | 3 cut(s) | 205, 889, 1535 |
| HhaI | GCGC | 8 cut(s) | 41, 151, 167, 214, 397, 416, 1116, 2056 |
| Hin1I | GRCGYC | 4 cut(s) | 39, 881, 1546, 2054 |
| Hin6I | GCGC | 8 cut(s) | 39, 149, 165, 212, 395, 414, 1114, 2054 |
| HinP1I | GCGC | 8 cut(s) | 39, 149, 165, 212, 395, 414, 1114, 2054 |
| HincII | GTYRAC | 1 cut(s) | 2658 |
| HindII | GTYRAC | 1 cut(s) | 2658 |
| HindIII | AAGCTT | 2 cut(s) | 500, 1756 |
| HinfI | GANTC | 8 cut(s) | 115, 484, 670, 1277, 1310, 1798, 2111, 2278 |
| HpaII | CCGG | 2 cut(s) | 667, 2256 |
| HphI | GGTGA | 5 cut(s) | 84, 478, 911, 1385, 2634 |
| Hpy166II | GTNNAC | 6 cut(s) | 1106, 1138, 1196, 2068, 2494, 2658 |
| Hpy8I | GTNNAC | 6 cut(s) | 1106, 1138, 1196, 2068, 2494, 2658 |
| Hpy99I | CGWCG | 4 cut(s) | 82, 157, 199, 2389 |
| HpyAV | CCTTC | 7 cut(s) | 108, 244, 553, 966, 1471, 2070, 2478 |
| HpyCH4III | ACNGT | 7 cut(s) | 1514, 1860, 1952, 2024, 2076, 2703, 2711 |
| HpyCH4IV | ACGT | 4 cut(s) | 231, 267, 1990, 2384 |
| HpySE526I | ACGT | 4 cut(s) | 231, 267, 1990, 2384 |
| Hsp92I | GRCGYC | 4 cut(s) | 39, 881, 1546, 2054 |
| HspAI | GCGC | 8 cut(s) | 39, 149, 165, 212, 395, 414, 1114, 2054 |
| KasI | GGCGCC | 2 cut(s) | 38, 2053 |
| KpnI | GGTACC | 1 cut(s) | 1926 |
| Ksp22I | TGATCA | 1 cut(s) | 1441 |
| LmnI | GCTCC | 2 cut(s) | 1828, 1851 |
| Lsp1109I | GCAGC | 6 cut(s) | 121, 232, 439, 2131, 2140, 2683 |
| LweI | GCATC | 7 cut(s) | 1009, 1493, 1549, 1600, 2089, 2566, 2640 |
| MabI | ACCWGGT | 1 cut(s) | 1396 |
| MaeI | CTAG | 7 cut(s) | 767, 1323, 1413, 1899, 1997, 2169, 2481 |
| MaeII | ACGT | 4 cut(s) | 231, 267, 1990, 2384 |
| MaeIII | GTNAC | 9 cut(s) | 1278, 1378, 1854, 2299, 2342, 2409, 2630, 2640, 2674 |
| MfeI | CAATTG | 1 cut(s) | 1745 |
| MflI | RGATCY | 4 cut(s) | 1152, 1216, 1838, 1960 |
| MhlI | GDGCHC | 4 cut(s) | 682, 1102, 1390, 2070 |
| MlsI | TGGCCA | 2 cut(s) | 401, 2352 |
| MluNI | TGGCCA | 2 cut(s) | 401, 2352 |
| Mly113I | GGCGCC | 2 cut(s) | 39, 2054 |
| MlyI | GAGTC | 3 cut(s) | 1286, 1319, 2120 |
| MmeI | TCCRAC | 4 cut(s) | 27, 1762, 1816, 2367 |
| Mox20I | TGGCCA | 2 cut(s) | 401, 2352 |
| Mph1103I | ATGCAT | 1 cut(s) | 2137 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2282 |
| MscI | TGGCCA | 2 cut(s) | 401, 2352 |
| MseI | TTAA | 7 cut(s) | 621, 642, 1005, 1023, 1349, 1452, 1955 |
| MslI | CAYNNNNRTG | 5 cut(s) | 230, 1191, 2148, 2436, 2499 |
| Msp20I | TGGCCA | 2 cut(s) | 401, 2352 |
| MspA1I | CMGCKG | 4 cut(s) | 1769, 1928, 2329, 2471 |
| MspI | CCGG | 2 cut(s) | 667, 2256 |
| MspR9I | CCNGG | 3 cut(s) | 649, 1398, 1790 |
| MunI | CAATTG | 1 cut(s) | 1745 |
| Mva1269I | GAATGC | 1 cut(s) | 1116 |
| MvaI | CCWGG | 3 cut(s) | 649, 1398, 1790 |
| NarI | GGCGCC | 2 cut(s) | 39, 2054 |
| NcoI | CCATGG | 3 cut(s) | 1226, 2049, 2093 |
| NdeI | CATATG | 3 cut(s) | 703, 1093, 2145 |
| NlaIV | GGNNCC | 7 cut(s) | 40, 679, 1924, 2055, 2254, 2476, 2574 |
| NmuCI | GTSAC | 6 cut(s) | 1278, 1854, 2299, 2409, 2630, 2640 |
| NsiI | ATGCAT | 1 cut(s) | 2137 |
| NspI | RCATGY | 2 cut(s) | 1676, 2135 |
| OliI | CACNNNNGTG | 1 cut(s) | 230 |
| PaeI | GCATGC | 2 cut(s) | 1676, 2135 |
| PagI | TCATGA | 1 cut(s) | 1354 |
| PaqCI | CACCTGC | 1 cut(s) | 205 |
| PceI | AGGCCT | 3 cut(s) | 647, 1204, 2296 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 77, 83 |
| PctI | GAATGC | 1 cut(s) | 1116 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2282 |
| PfeI | GAWTC | 5 cut(s) | 115, 484, 670, 1798, 2278 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 890 |
| PkrI | GCNGC | 9 cut(s) | 127, 130, 133, 136, 222, 454, 2121, 2130, 2698 |
| PleI | GAGTC | 3 cut(s) | 1285, 1318, 2119 |
| PluTI | GGCGCC | 2 cut(s) | 42, 2057 |
| PpsI | GAGTC | 3 cut(s) | 1285, 1318, 2119 |
| Ppu21I | YACGTR | 1 cut(s) | 1991 |
| PpuMI | RGGWCCY | 1 cut(s) | 2573 |
| PsiI | TTATAA | 1 cut(s) | 1947 |
| Psp5II | RGGWCCY | 1 cut(s) | 2573 |
| Psp6I | CCWGG | 3 cut(s) | 647, 1396, 1788 |
| PspFI | CCCAGC | 1 cut(s) | 2450 |
| PspGI | CCWGG | 3 cut(s) | 647, 1396, 1788 |
| PspN4I | GGNNCC | 7 cut(s) | 40, 679, 1924, 2055, 2254, 2476, 2574 |
| PspPI | GGNCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| PspPPI | RGGWCCY | 1 cut(s) | 2573 |
| PsuI | RGATCY | 4 cut(s) | 1152, 1216, 1838, 1960 |
| PvuII | CAGCTG | 1 cut(s) | 1769 |
| RsaI | GTAC | 7 cut(s) | 173, 324, 1273, 1474, 1668, 1924, 2493 |
| RsaNI | GTAC | 7 cut(s) | 172, 323, 1272, 1473, 1667, 1923, 2492 |
| RseI | CAYNNNNRTG | 5 cut(s) | 230, 1191, 2148, 2436, 2499 |
| SaqAI | TTAA | 7 cut(s) | 621, 642, 1005, 1023, 1349, 1452, 1955 |
| SatI | GCNGC | 9 cut(s) | 126, 129, 132, 135, 221, 453, 2120, 2129, 2697 |
| Sau96I | GGNCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| ScaI | AGTACT | 1 cut(s) | 173 |
| SchI | GAGTC | 3 cut(s) | 1286, 1319, 2120 |
| ScrFI | CCNGG | 3 cut(s) | 649, 1398, 1790 |
| SduI | GDGCHC | 4 cut(s) | 682, 1102, 1390, 2070 |
| SexAI | ACCWGGT | 1 cut(s) | 1396 |
| SfaNI | GCATC | 7 cut(s) | 1009, 1493, 1549, 1600, 2089, 2566, 2640 |
| SfoI | GGCGCC | 2 cut(s) | 40, 2055 |
| SinI | GGWCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 230, 1191, 2148, 2436, 2499 |
| SmlI | CTYRAG | 4 cut(s) | 581, 832, 926, 2623 |
| SmoI | CTYRAG | 4 cut(s) | 581, 832, 926, 2623 |
| SnaBI | TACGTA | 1 cut(s) | 1991 |
| SphI | GCATGC | 2 cut(s) | 1676, 2135 |
| SseBI | AGGCCT | 3 cut(s) | 647, 1204, 2296 |
| SspDI | GGCGCC | 2 cut(s) | 38, 2053 |
| SspI | AATATT | 1 cut(s) | 526 |
| SspMI | CTAG | 7 cut(s) | 767, 1323, 1413, 1899, 1997, 2169, 2481 |
| StuI | AGGCCT | 3 cut(s) | 647, 1204, 2296 |
| StyD4I | CCNGG | 3 cut(s) | 647, 1396, 1788 |
| StyI | CCWWGG | 7 cut(s) | 1039, 1226, 2049, 2093, 2168, 2306, 2645 |
| TaaI | ACNGT | 7 cut(s) | 1514, 1860, 1952, 2024, 2076, 2703, 2711 |
| TaiI | ACGT | 4 cut(s) | 234, 270, 1993, 2387 |
| TaqI | TCGA | 5 cut(s) | 113, 261, 698, 876, 2107 |
| TaqII | GACCGA | 1 cut(s) | 2603 |
| TatI | WGTACW | 3 cut(s) | 171, 1666, 2491 |
| TauI | GCSGC | 3 cut(s) | 128, 131, 134 |
| TfiI | GAWTC | 5 cut(s) | 115, 484, 670, 1798, 2278 |
| Tru1I | TTAA | 7 cut(s) | 621, 642, 1005, 1023, 1349, 1452, 1955 |
| Tru9I | TTAA | 7 cut(s) | 621, 642, 1005, 1023, 1349, 1452, 1955 |
| TscAI | CASTG | 2 cut(s) | 232, 2635 |
| TseFI | GTSAC | 6 cut(s) | 1278, 1854, 2299, 2409, 2630, 2640 |
| TseI | GCWGC | 6 cut(s) | 134, 220, 452, 2119, 2128, 2696 |
| Tsp45I | GTSAC | 6 cut(s) | 1278, 1854, 2299, 2409, 2630, 2640 |
| TspGWI | ACGGA | 1 cut(s) | 1842 |
| TspRI | CASTG | 2 cut(s) | 232, 2635 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 890 |
| VneI | GTGCAC | 1 cut(s) | 2066 |
| VpaK11BI | GGWCC | 6 cut(s) | 761, 839, 1230, 1457, 1689, 2573 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 584, 960, 1401 |
| XapI | RAATTY | 4 cut(s) | 425, 782, 803, 2540 |
| XbaI | TCTAGA | 1 cut(s) | 1996 |
| XceI | RCATGY | 2 cut(s) | 1676, 2135 |
| XmaJI | CCTAGG | 1 cut(s) | 2168 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2282 |
| XspI | CTAG | 7 cut(s) | 767, 1323, 1413, 1899, 1997, 2169, 2481 |
| ZrmI | AGTACT | 1 cut(s) | 173 |
| Zsp2I | ATGCAT | 1 cut(s) | 2137 |