isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51620 AT3G51620 AT3G51620 |
| fragaria_vesca | FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 |
| malus_domestica | MD04G1172800.v1.1 MD12G1186100.v1.1 |
| prunus_persica | Prupe.6G291600_v2.0.a1 |
| pyrus_communis | pycom04g15270 pycom12g17470 |
| rosa_chinensis | RchiOBHm_Chr3g0460811 |
| rosa_laevigata | RLG00000024979 |
| rosa_multiflora | Rmu_sc0007678.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00419200 |
| rosa_rugosa | Rorug03G0046500 |
| rosa_samantha | Rh3AG103600 Rh3BG107300 Rh3CG109200 Rh3DG109100 |
| rosa_wichuraiana | Rw3G008820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 393 |
| Acc36I | ACCTGC | 2 cut(s) | 553, 1235 |
| AccB1I | GGYRCC | 4 cut(s) | 41, 653, 1993, 2509 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 866 |
| AccII | CGCG | 1 cut(s) | 134 |
| AciI | CCGC | 9 cut(s) | 125, 128, 132, 134, 236, 746, 1401, 2634, 2672 |
| AclWI | GGATC | 6 cut(s) | 986, 1123, 1342, 1777, 1917, 2584 |
| AcoI | YGGCCR | 4 cut(s) | 129, 135, 381, 1018 |
| AcsI | RAATTY | 3 cut(s) | 758, 779, 2477 |
| AcuI | CTGAAG | 2 cut(s) | 1836, 2379 |
| AcyI | GRCGYC | 3 cut(s) | 42, 119, 390 |
| AfaI | GTAC | 6 cut(s) | 155, 306, 1249, 1861, 2355, 2430 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 156, 409, 866, 938, 1483, 1565, 2506, 2519 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AgsI | TTSAA | 8 cut(s) | 419, 523, 733, 1296, 1520, 1536, 2451, 2653 |
| AjiI | CACGTC | 1 cut(s) | 214 |
| AjnI | CCWGG | 3 cut(s) | 1719, 2512, 2581 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2059, 2091 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2188, 2220 |
| AluBI | AGCT | 7 cut(s) | 194, 478, 807, 1689, 1700, 1966, 2603 |
| AluI | AGCT | 7 cut(s) | 194, 478, 807, 1689, 1700, 1966, 2603 |
| Alw21I | GWGCWC | 1 cut(s) | 1078 |
| Alw26I | GTCTC | 6 cut(s) | 683, 848, 941, 1764, 2277, 2367 |
| AlwI | GGATC | 6 cut(s) | 986, 1123, 1342, 1777, 1917, 2584 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1286, 1678 |
| Ama87I | CYCGRG | 1 cut(s) | 2560 |
| AoxI | GGCC | 6 cut(s) | 59, 129, 135, 381, 1018, 1178 |
| ApeKI | GCWGC | 2 cut(s) | 1973, 2056 |
| ApoI | RAATTY | 3 cut(s) | 758, 779, 2477 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 667, 699 |
| AseI | ATTAAT | 1 cut(s) | 458 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2219 |
| AspA2I | CCTAGG | 1 cut(s) | 2417 |
| AspLEI | GCGC | 6 cut(s) | 44, 149, 379, 603, 1092, 2061 |
| AspS9I | GGNCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| AsuHPI | GGTGA | 4 cut(s) | 454, 1358, 1604, 2571 |
| AvaI | CYCGRG | 1 cut(s) | 2560 |
| AvaII | GGWCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| AvrII | CCTAGG | 1 cut(s) | 2417 |
| BaeGI | GKGCMC | 1 cut(s) | 658 |
| BalI | TGGCCA | 1 cut(s) | 383 |
| BanI | GGYRCC | 4 cut(s) | 41, 653, 1993, 2509 |
| BauI | CACGAG | 1 cut(s) | 2184 |
| BbsI | GAAGAC | 2 cut(s) | 1824, 2385 |
| Bbv12I | GWGCWC | 1 cut(s) | 1078 |
| BbvI | GCAGC | 2 cut(s) | 1960, 2068 |
| BccI | CCATC | 9 cut(s) | 323, 597, 666, 720, 1211, 1608, 1788, 1833, 2509 |
| BceAI | ACGGC | 3 cut(s) | 29, 46, 55 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 551, 585 |
| BciT130I | CCWGG | 3 cut(s) | 1721, 2514, 2583 |
| BclI | TGATCA | 1 cut(s) | 615 |
| BcoDI | GTCTC | 6 cut(s) | 683, 848, 941, 1764, 2277, 2367 |
| BfaI | CTAG | 5 cut(s) | 743, 1371, 1830, 2106, 2418 |
| BfmI | CTRYAG | 1 cut(s) | 955 |
| BfoI | RGCGCY | 3 cut(s) | 45, 150, 380 |
| BfuAI | ACCTGC | 2 cut(s) | 553, 1235 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 579 |
| BglII | AGATCT | 2 cut(s) | 1192, 1897 |
| BisI | GCNGC | 7 cut(s) | 126, 129, 132, 135, 1974, 2057, 2634 |
| BlnI | CCTAGG | 1 cut(s) | 2417 |
| BlsI | GCNGC | 7 cut(s) | 127, 130, 133, 136, 1975, 2058, 2635 |
| BmcAI | AGTACT | 2 cut(s) | 155, 1861 |
| Bme1390I | CCNGG | 3 cut(s) | 1721, 2514, 2583 |
| Bme18I | GGWCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| BmeT110I | CYCGRG | 1 cut(s) | 2560 |
| BmgBI | CACGTC | 1 cut(s) | 214 |
| BmgT120I | GGNCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| BmiI | GGNNCC | 7 cut(s) | 43, 655, 1810, 1995, 2191, 2413, 2511 |
| BmrFI | CCNGG | 3 cut(s) | 1721, 2514, 2583 |
| BmrI | ACTGGG | 1 cut(s) | 2499 |
| BmsI | GCATC | 8 cut(s) | 80, 734, 810, 1101, 1424, 1480, 1531, 2577 |
| BmuI | ACTGGG | 1 cut(s) | 2499 |
| BoxI | GACNNNNGTC | 1 cut(s) | 695 |
| BpiI | GAAGAC | 2 cut(s) | 1824, 2385 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1567, 1599 |
| BpmI | CTGGAG | 2 cut(s) | 1495, 1983 |
| Bpu10I | CCTNAGC | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 3 cut(s) | 578, 829, 887 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1728 |
| BsaHI | GRCGYC | 3 cut(s) | 42, 119, 390 |
| BsaI | GGTCTC | 1 cut(s) | 2277 |
| BsaJI | CCNNGG | 9 cut(s) | 66, 132, 168, 1986, 2030, 2417, 2513, 2572, 2582 |
| BsaWI | WCCGGW | 1 cut(s) | 2192 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 47, 77, 1742, 1772 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 156, 409, 866, 938, 1483, 1565, 2506, 2519 |
| Bse118I | RCCGGY | 1 cut(s) | 137 |
| Bse1I | ACTGG | 6 cut(s) | 161, 818, 1642, 2000, 2268, 2494 |
| Bse3DI | GCAATG | 1 cut(s) | 1663 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1728 |
| BseBI | CCWGG | 3 cut(s) | 1721, 2514, 2583 |
| BseDI | CCNNGG | 9 cut(s) | 66, 132, 168, 1986, 2030, 2417, 2513, 2572, 2582 |
| BseGI | GGATG | 9 cut(s) | 107, 1092, 1415, 1495, 1729, 1825, 2041, 2455, 2592 |
| BseJI | GATNNNNATC | 1 cut(s) | 1728 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 156, 409, 866, 938, 1483, 1565, 2506, 2519 |
| BseMI | GCAATG | 1 cut(s) | 1663 |
| BseMII | CTCAG | 7 cut(s) | 209, 423, 939, 1115, 1446, 1915, 2316 |
| BseNI | ACTGG | 6 cut(s) | 161, 818, 1642, 2000, 2268, 2494 |
| BseRI | GAGGAG | 4 cut(s) | 68, 238, 386, 2265 |
| BseSI | GKGCMC | 1 cut(s) | 658 |
| BseX3I | CGGCCG | 2 cut(s) | 129, 135 |
| BseXI | GCAGC | 2 cut(s) | 1960, 2068 |
| BsgI | GTGCAG | 2 cut(s) | 2075, 2172 |
| Bsh1236I | CGCG | 1 cut(s) | 134 |
| Bsh1285I | CGRYCG | 3 cut(s) | 132, 138, 571 |
| BshFI | GGCC | 6 cut(s) | 61, 131, 137, 383, 1020, 1180 |
| BshNI | GGYRCC | 4 cut(s) | 41, 653, 1993, 2509 |
| BsiEI | CGRYCG | 3 cut(s) | 132, 138, 571 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1078 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2560 |
| BsiSI | CCGG | 4 cut(s) | 116, 138, 643, 2193 |
| BslFI | GGGAC | 4 cut(s) | 803, 1184, 1661, 2087 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 156, 409, 866, 938, 1483, 1565, 2506, 2519 |
| BsmAI | GTCTC | 6 cut(s) | 683, 848, 941, 1764, 2277, 2367 |
| BsmFI | GGGAC | 4 cut(s) | 803, 1184, 1661, 2087 |
| BsmI | GAATGC | 2 cut(s) | 2005, 2092 |
| BsnI | GGCC | 6 cut(s) | 61, 131, 137, 383, 1020, 1180 |
| Bso31I | GGTCTC | 1 cut(s) | 2277 |
| BsoBI | CYCGRG | 1 cut(s) | 2560 |
| Bsp1286I | GDGCHC | 2 cut(s) | 658, 1078 |
| Bsp19I | CCATGG | 3 cut(s) | 1986, 2030, 2572 |
| BspACI | CCGC | 9 cut(s) | 125, 128, 132, 134, 236, 746, 1401, 2634, 2672 |
| BspANI | GGCC | 6 cut(s) | 61, 131, 137, 383, 1020, 1180 |
| BspCNI | CTCAG | 7 cut(s) | 208, 424, 938, 1114, 1445, 1914, 2317 |
| BspFNI | CGCG | 1 cut(s) | 134 |
| BspHI | TCATGA | 1 cut(s) | 1912 |
| BspLI | GGNNCC | 7 cut(s) | 43, 655, 1810, 1995, 2191, 2413, 2511 |
| BspMI | ACCTGC | 2 cut(s) | 553, 1235 |
| BspPI | GGATC | 6 cut(s) | 986, 1123, 1342, 1777, 1917, 2584 |
| BspT107I | GGYRCC | 4 cut(s) | 41, 653, 1993, 2509 |
| BspTNI | GGTCTC | 1 cut(s) | 2277 |
| BsrDI | GCAATG | 1 cut(s) | 1663 |
| BsrFI | RCCGGY | 1 cut(s) | 137 |
| BsrI | ACTGG | 6 cut(s) | 161, 818, 1642, 2000, 2268, 2494 |
| BssAI | RCCGGY | 1 cut(s) | 137 |
| BssECI | CCNNGG | 9 cut(s) | 66, 132, 168, 1986, 2030, 2417, 2513, 2572, 2582 |
| BssNI | GRCGYC | 3 cut(s) | 42, 119, 390 |
| BssSI | CACGAG | 1 cut(s) | 2184 |
| BssT1I | CCWWGG | 4 cut(s) | 1986, 2030, 2417, 2572 |
| Bst2BI | CACGAG | 1 cut(s) | 2184 |
| Bst2UI | CCWGG | 3 cut(s) | 1721, 2514, 2583 |
| Bst4CI | ACNGT | 7 cut(s) | 1445, 1478, 1791, 2013, 2049, 2336, 2648 |
| Bst6I | CTCTTC | 1 cut(s) | 722 |
| BstACI | GRCGYC | 3 cut(s) | 42, 119, 390 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 549 |
| BstC8I | GCNNGC | 5 cut(s) | 381, 2155, 2496, 2525, 2539 |
| BstDEI | CTNAG | 9 cut(s) | 195, 432, 887, 925, 1101, 1432, 1773, 1901, 2325 |
| BstDSI | CCRYGG | 4 cut(s) | 132, 1986, 2030, 2572 |
| BstEII | GGTNACC | 1 cut(s) | 1715 |
| BstF5I | GGATG | 9 cut(s) | 107, 1092, 1415, 1495, 1729, 1825, 2041, 2455, 2592 |
| BstFNI | CGCG | 1 cut(s) | 134 |
| BstH2I | RGCGCY | 3 cut(s) | 45, 150, 380 |
| BstHHI | GCGC | 6 cut(s) | 44, 149, 379, 603, 1092, 2061 |
| BstMAI | GTCTC | 6 cut(s) | 683, 848, 941, 1764, 2277, 2367 |
| BstMCI | CGRYCG | 3 cut(s) | 132, 138, 571 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 125, 131, 134, 173, 549, 579, 1604 |
| BstNI | CCWGG | 3 cut(s) | 1721, 2514, 2583 |
| BstNSI | RCATGY | 1 cut(s) | 2498 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 695 |
| BstPI | GGTNACC | 1 cut(s) | 1715 |
| BstSCI | CCNGG | 3 cut(s) | 1719, 2512, 2581 |
| BstSFI | CTRYAG | 1 cut(s) | 955 |
| BstSLI | GKGCMC | 1 cut(s) | 658 |
| BstUI | CGCG | 1 cut(s) | 134 |
| BstV1I | GCAGC | 2 cut(s) | 1960, 2068 |
| BstV2I | GAAGAC | 2 cut(s) | 1824, 2385 |
| BstX2I | RGATCY | 4 cut(s) | 1128, 1192, 1769, 1897 |
| BstYI | RGATCY | 4 cut(s) | 1128, 1192, 1769, 1897 |
| BstZI | CGGCCG | 2 cut(s) | 129, 135 |
| BsuRI | GGCC | 6 cut(s) | 61, 131, 137, 383, 1020, 1180 |
| BtgI | CCRYGG | 4 cut(s) | 132, 1986, 2030, 2572 |
| BtrI | CACGTC | 1 cut(s) | 214 |
| BtsCI | GGATG | 9 cut(s) | 107, 1092, 1415, 1495, 1729, 1825, 2041, 2455, 2592 |
| BtsI | GCAGTG | 1 cut(s) | 2597 |
| BtsIMutI | CAGTG | 5 cut(s) | 1909, 2007, 2058, 2261, 2597 |
| BveI | ACCTGC | 2 cut(s) | 553, 1235 |
| Cac8I | GCNNGC | 5 cut(s) | 381, 2155, 2496, 2525, 2539 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1286, 1678 |
| CciI | TCATGA | 1 cut(s) | 1912 |
| CciNI | GCGGCCGC | 1 cut(s) | 129 |
| CfoI | GCGC | 6 cut(s) | 44, 149, 379, 603, 1092, 2061 |
| Cfr10I | RCCGGY | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| Cfr42I | CCGCGG | 1 cut(s) | 135 |
| CseI | GACGC | 2 cut(s) | 108, 187 |
| Csp6I | GTAC | 6 cut(s) | 154, 305, 1248, 1860, 2354, 2429 |
| CviQI | GTAC | 6 cut(s) | 154, 305, 1248, 1860, 2354, 2429 |
| DdeI | CTNAG | 9 cut(s) | 195, 432, 887, 925, 1101, 1432, 1773, 1901, 2325 |
| DinI | GGCGCC | 1 cut(s) | 43 |
| EaeI | YGGCCR | 4 cut(s) | 129, 135, 381, 1018 |
| EagI | CGGCCG | 2 cut(s) | 129, 135 |
| Eam1104I | CTCTTC | 1 cut(s) | 722 |
| EarI | CTCTTC | 1 cut(s) | 722 |
| EclXI | CGGCCG | 2 cut(s) | 129, 135 |
| Eco130I | CCWWGG | 4 cut(s) | 1986, 2030, 2417, 2572 |
| Eco147I | AGGCCT | 1 cut(s) | 1180 |
| Eco31I | GGTCTC | 1 cut(s) | 2277 |
| Eco47I | GGWCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| Eco52I | CGGCCG | 2 cut(s) | 129, 135 |
| Eco57I | CTGAAG | 2 cut(s) | 1836, 2379 |
| Eco88I | CYCGRG | 1 cut(s) | 2560 |
| Eco91I | GGTNACC | 1 cut(s) | 1715 |
| EcoO65I | GGTNACC | 1 cut(s) | 1715 |
| EcoRII | CCWGG | 3 cut(s) | 1719, 2512, 2581 |
| EcoT14I | CCWWGG | 4 cut(s) | 1986, 2030, 2417, 2572 |
| EcoT22I | ATGCAT | 2 cut(s) | 727, 2074 |
| EgeI | GGCGCC | 1 cut(s) | 43 |
| EheI | GGCGCC | 1 cut(s) | 43 |
| ErhI | CCWWGG | 4 cut(s) | 1986, 2030, 2417, 2572 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1045, 1077 |
| FaqI | GGGAC | 4 cut(s) | 803, 1184, 1661, 2087 |
| FauI | CCCGC | 1 cut(s) | 2679 |
| FauNDI | CATATG | 3 cut(s) | 679, 1069, 2319 |
| FbaI | TGATCA | 1 cut(s) | 615 |
| Fnu4HI | GCNGC | 7 cut(s) | 126, 129, 132, 135, 1974, 2057, 2634 |
| FokI | GGATG | 9 cut(s) | 94, 1079, 1402, 1502, 1736, 1812, 2048, 2442, 2599 |
| Fsp4HI | GCNGC | 7 cut(s) | 126, 129, 132, 135, 1974, 2057, 2634 |
| FspBI | CTAG | 5 cut(s) | 743, 1371, 1830, 2106, 2418 |
| GlaI | GCGC | 6 cut(s) | 43, 148, 378, 602, 1091, 2060 |
| GluI | GCNGC | 7 cut(s) | 126, 129, 132, 135, 1974, 2057, 2634 |
| GsuI | CTGGAG | 2 cut(s) | 1495, 1983 |
| HaeII | RGCGCY | 3 cut(s) | 45, 150, 380 |
| HaeIII | GGCC | 6 cut(s) | 61, 131, 137, 383, 1020, 1180 |
| HapII | CCGG | 4 cut(s) | 116, 138, 643, 2193 |
| HgaI | GACGC | 2 cut(s) | 108, 187 |
| HhaI | GCGC | 6 cut(s) | 44, 149, 379, 603, 1092, 2061 |
| Hin1I | GRCGYC | 3 cut(s) | 42, 119, 390 |
| Hin6I | GCGC | 6 cut(s) | 42, 147, 377, 601, 1090, 2059 |
| HinP1I | GCGC | 6 cut(s) | 42, 147, 377, 601, 1090, 2059 |
| HincII | GTYRAC | 1 cut(s) | 2487 |
| HindII | GTYRAC | 1 cut(s) | 2487 |
| HindIII | AAGCTT | 2 cut(s) | 476, 1687 |
| HinfI | GANTC | 6 cut(s) | 646, 1253, 1277, 1283, 1729, 2314 |
| HpaII | CCGG | 4 cut(s) | 116, 138, 643, 2193 |
| HphI | GGTGA | 4 cut(s) | 454, 1358, 1604, 2571 |
| Hpy166II | GTNNAC | 4 cut(s) | 1172, 2431, 2487, 2595 |
| Hpy8I | GTNNAC | 4 cut(s) | 1172, 2431, 2487, 2595 |
| Hpy99I | CGWCG | 3 cut(s) | 79, 124, 181 |
| HpyAV | CCTTC | 7 cut(s) | 222, 226, 529, 1402, 1563, 1569, 1890 |
| HpyCH4III | ACNGT | 7 cut(s) | 1445, 1478, 1791, 2013, 2049, 2336, 2648 |
| HpyCH4IV | ACGT | 3 cut(s) | 213, 249, 390 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 125, 131, 134, 173, 549, 579, 1604 |
| HpyF3I | CTNAG | 9 cut(s) | 195, 432, 887, 925, 1101, 1432, 1773, 1901, 2325 |
| HpySE526I | ACGT | 3 cut(s) | 213, 249, 390 |
| Hsp92I | GRCGYC | 3 cut(s) | 42, 119, 390 |
| HspAI | GCGC | 6 cut(s) | 42, 147, 377, 601, 1090, 2059 |
| KasI | GGCGCC | 1 cut(s) | 41 |
| Ksp22I | TGATCA | 1 cut(s) | 615 |
| KspI | CCGCGG | 1 cut(s) | 135 |
| Lsp1109I | GCAGC | 2 cut(s) | 1960, 2068 |
| LweI | GCATC | 8 cut(s) | 80, 734, 810, 1101, 1424, 1480, 1531, 2577 |
| MaeI | CTAG | 5 cut(s) | 743, 1371, 1830, 2106, 2418 |
| MaeII | ACGT | 3 cut(s) | 213, 249, 390 |
| MaeIII | GTNAC | 7 cut(s) | 1254, 1351, 1715, 1785, 1919, 2139, 2279 |
| MflI | RGATCY | 4 cut(s) | 1128, 1192, 1769, 1897 |
| MhlI | GDGCHC | 2 cut(s) | 658, 1078 |
| MlsI | TGGCCA | 1 cut(s) | 383 |
| MluNI | TGGCCA | 1 cut(s) | 383 |
| Mly113I | GGCGCC | 1 cut(s) | 42 |
| MlyI | GAGTC | 1 cut(s) | 1262 |
| MmeI | TCCRAC | 2 cut(s) | 1747, 1908 |
| Mox20I | TGGCCA | 1 cut(s) | 383 |
| Mph1103I | ATGCAT | 2 cut(s) | 727, 2074 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2219 |
| MscI | TGGCCA | 1 cut(s) | 383 |
| MseI | TTAA | 6 cut(s) | 458, 474, 597, 981, 999, 1322 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1167, 2373, 2442 |
| Msp20I | TGGCCA | 1 cut(s) | 383 |
| MspA1I | CMGCKG | 2 cut(s) | 134, 1700 |
| MspI | CCGG | 4 cut(s) | 116, 138, 643, 2193 |
| MspR9I | CCNGG | 3 cut(s) | 1721, 2514, 2583 |
| Mva1269I | GAATGC | 2 cut(s) | 2005, 2092 |
| MvaI | CCWGG | 3 cut(s) | 1721, 2514, 2583 |
| MvnI | CGCG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 125, 131, 134, 173, 549, 579, 1604 |
| NarI | GGCGCC | 1 cut(s) | 42 |
| NcoI | CCATGG | 3 cut(s) | 1986, 2030, 2572 |
| NdeI | CATATG | 3 cut(s) | 679, 1069, 2319 |
| NlaIV | GGNNCC | 7 cut(s) | 43, 655, 1810, 1995, 2191, 2413, 2511 |
| NmeAIII | GCCGAG | 3 cut(s) | 47, 175, 193 |
| NmuCI | GTSAC | 3 cut(s) | 1254, 1785, 1919 |
| NotI | GCGGCCGC | 1 cut(s) | 129 |
| NsiI | ATGCAT | 2 cut(s) | 727, 2074 |
| NspI | RCATGY | 1 cut(s) | 2498 |
| PaeI | GCATGC | 1 cut(s) | 2498 |
| PaeR7I | CTCGAG | 1 cut(s) | 2560 |
| PagI | TCATGA | 1 cut(s) | 1912 |
| PceI | AGGCCT | 1 cut(s) | 1180 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 74 |
| PctI | GAATGC | 2 cut(s) | 2005, 2092 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2219 |
| PfeI | GAWTC | 5 cut(s) | 646, 1277, 1283, 1729, 2314 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 866 |
| PkrI | GCNGC | 7 cut(s) | 127, 130, 133, 136, 1975, 2058, 2635 |
| Ple19I | CGATCG | 1 cut(s) | 571 |
| PleI | GAGTC | 1 cut(s) | 1261 |
| PluTI | GGCGCC | 1 cut(s) | 45 |
| PpsI | GAGTC | 1 cut(s) | 1261 |
| PshAI | GACNNNNGTC | 1 cut(s) | 695 |
| PshBI | ATTAAT | 1 cut(s) | 458 |
| Psp6I | CCWGG | 3 cut(s) | 1719, 2512, 2581 |
| PspEI | GGTNACC | 1 cut(s) | 1715 |
| PspGI | CCWGG | 3 cut(s) | 1719, 2512, 2581 |
| PspN4I | GGNNCC | 7 cut(s) | 43, 655, 1810, 1995, 2191, 2413, 2511 |
| PspPI | GGNCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| PspXI | VCTCGAGB | 1 cut(s) | 2560 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1286, 1678 |
| PsuI | RGATCY | 4 cut(s) | 1128, 1192, 1769, 1897 |
| PvuI | CGATCG | 1 cut(s) | 571 |
| PvuII | CAGCTG | 1 cut(s) | 1700 |
| RsaI | GTAC | 6 cut(s) | 155, 306, 1249, 1861, 2355, 2430 |
| RsaNI | GTAC | 6 cut(s) | 154, 305, 1248, 1860, 2354, 2429 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1167, 2373, 2442 |
| SacII | CCGCGG | 1 cut(s) | 135 |
| SaqAI | TTAA | 6 cut(s) | 458, 474, 597, 981, 999, 1322 |
| SatI | GCNGC | 7 cut(s) | 126, 129, 132, 135, 1974, 2057, 2634 |
| Sau96I | GGNCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| ScaI | AGTACT | 2 cut(s) | 155, 1861 |
| SchI | GAGTC | 1 cut(s) | 1262 |
| ScrFI | CCNGG | 3 cut(s) | 1721, 2514, 2583 |
| SduI | GDGCHC | 2 cut(s) | 658, 1078 |
| SfaNI | GCATC | 8 cut(s) | 80, 734, 810, 1101, 1424, 1480, 1531, 2577 |
| SfcI | CTRYAG | 1 cut(s) | 955 |
| SfoI | GGCGCC | 1 cut(s) | 43 |
| Sfr274I | CTCGAG | 1 cut(s) | 2560 |
| Sfr303I | CCGCGG | 1 cut(s) | 135 |
| SgrBI | CCGCGG | 1 cut(s) | 135 |
| SinI | GGWCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| SlaI | CTCGAG | 1 cut(s) | 2560 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1167, 2373, 2442 |
| SmlI | CTYRAG | 4 cut(s) | 557, 808, 902, 2560 |
| SmoI | CTYRAG | 4 cut(s) | 557, 808, 902, 2560 |
| SphI | GCATGC | 1 cut(s) | 2498 |
| SseBI | AGGCCT | 1 cut(s) | 1180 |
| SsiI | CCGC | 9 cut(s) | 125, 128, 132, 134, 236, 746, 1401, 2634, 2672 |
| SspDI | GGCGCC | 1 cut(s) | 41 |
| SspI | AATATT | 1 cut(s) | 502 |
| SspMI | CTAG | 5 cut(s) | 743, 1371, 1830, 2106, 2418 |
| StuI | AGGCCT | 1 cut(s) | 1180 |
| StyD4I | CCNGG | 3 cut(s) | 1719, 2512, 2581 |
| StyI | CCWWGG | 4 cut(s) | 1986, 2030, 2417, 2572 |
| TaaI | ACNGT | 7 cut(s) | 1445, 1478, 1791, 2013, 2049, 2336, 2648 |
| TaiI | ACGT | 3 cut(s) | 216, 252, 393 |
| TaqI | TCGA | 5 cut(s) | 405, 567, 674, 2044, 2561 |
| TatI | WGTACW | 4 cut(s) | 153, 1859, 2353, 2428 |
| TauI | GCSGC | 5 cut(s) | 128, 131, 134, 137, 2636 |
| TfiI | GAWTC | 5 cut(s) | 646, 1277, 1283, 1729, 2314 |
| Tru1I | TTAA | 6 cut(s) | 458, 474, 597, 981, 999, 1322 |
| Tru9I | TTAA | 6 cut(s) | 458, 474, 597, 981, 999, 1322 |
| TscAI | CASTG | 5 cut(s) | 1909, 2007, 2058, 2268, 2597 |
| TseFI | GTSAC | 3 cut(s) | 1254, 1785, 1919 |
| TseI | GCWGC | 2 cut(s) | 1973, 2056 |
| Tsp45I | GTSAC | 3 cut(s) | 1254, 1785, 1919 |
| TspDTI | ATGAA | 8 cut(s) | 96, 1290, 1410, 1421, 2099, 2141, 2634, 2673 |
| TspGWI | ACGGA | 1 cut(s) | 921 |
| TspRI | CASTG | 5 cut(s) | 1909, 2007, 2058, 2268, 2597 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 866 |
| VpaK11BI | GGWCC | 5 cut(s) | 697, 737, 748, 815, 1388 |
| VspI | ATTAAT | 1 cut(s) | 458 |
| XapI | RAATTY | 3 cut(s) | 758, 779, 2477 |
| XceI | RCATGY | 1 cut(s) | 2498 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2589 |
| XhoI | CTCGAG | 1 cut(s) | 2560 |
| XmaJI | CCTAGG | 1 cut(s) | 2417 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2219 |
| XspI | CTAG | 5 cut(s) | 743, 1371, 1830, 2106, 2418 |
| ZraI | GACGTC | 1 cut(s) | 391 |
| ZrmI | AGTACT | 2 cut(s) | 155, 1861 |
| Zsp2I | ATGCAT | 2 cut(s) | 727, 2074 |