Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007678.1

Orthogroup ID

OG0008549

Physical Location & Seq

Genomic Coordinates Reverse (-)

53548 .. 60984

Gene Structure 7437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007678.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2622 bp

atgggcgatcttaggccttggtcgcctgagccaaacggcgtcgtttcggaggagaggctgacctcgtcttcttcgtccgtgttttcaatttcaaccaatcagagggaggactggcggagagcggaggaggcgacgcagggggttatagctcaggtccagcctactcacgtctccgagcggagaaggaaggccgtcattgattacgtccagaggctcattggaggttgtcttgtttgcaaggtgttcccgtttggatcagtacctctgaagacgtatctcccggatggagatattgatctgactgcttttggtggtctaaatagtgaggagtcactggccaatgatgtctgtgctgttcttgaaagtgaaggtcacaatatggctgctgagtttgtggtgaaggatgtgcagttaattcgggctgaggttaagcttgtaaagtgccttgtgcaaaatattgtggttgatatatccttcaatcagttaggagggctatgtacgttatgctttctggagcaggttgatcgcctcattggcaaagatcatctctttaaacgtagtatcatactgattaaggcttggtgctattatgagagtcgaattctgggtgcccatcacggtttgatatctacatatggtttggagaccttagttctttttatcttccatctattccatacatctctgaatggtcctctagcggtcctgtataaattcttggactacttcagtaaatttgattgggacaactattgtatcagcttgaatggtccagttcccatatcctcacttcctgaactcttggctgagacgccagataatggtgggggtgatctgttgctcagtagcgaatttctcaggggttgtgtggataggttctcagttccttcaaggggatatgagacaaattatagaactttccagccaaagcatcttaatatagttgatccacttaaagaaaataacaaccttggcagaagtgtgagtaaaggaaacttttaccgaataaggagcgctttcacatatggtgctcgaaaactagggcgcatcctttcccagccagaagagaacactgatgatgagattagaaagttcttctcaaacacattggacaggcatggaagtggacagaggccggatgtccaagatcctattccatcatccagatatgatgggtttggttctgcattgggttcagagttgcaagaagataaagcagtttatgaatccgaatctgcttattcaaccggcttggttggggattctgggttaaatcatgagggatcttgggatggtggagatacaaatattaatgtacctggtcaagttacaaatggtccacccaaaagtgatacagagttagtatccccaacaatgtttacggaaatagagggttcctcaaacggaattgctgtgtcggagtgccgcctagttggggatgcaaaagacctagctacctccagatttcatgaccttacaatttcaaatgatgctcagaaaccatccccgtccaaaggtgagatgagtatgtctcctttgggtaaaacacaacttgcacctcatctttatttctctcactcatcaatgggaaatgggaacgttagtaatggagatgaagatcacgaactgccagaaagctttggatcagctgagaatggggttggtaaccaggatgagaatcaatcagcttgtaatcaggagtctttggctcctgttggacaaaagcaccaactttcacgcttgcattccattgtgggttcatctgaagacttttatcctagttattctggttatcggatgccaattagcactactggaagtcctgaaacttctaaccctttgtctgatctcagtggggaatatgatagtcacttacataacctacgtgatggccgttcatgctattatgcatacgagctcaatgcagtccatcatcccgtgcagcctccaatgccctcacagtaccagagaagtaagtcatgggatttaagtcgacagtctgtgcagctcagacagaatgcattttcaccaatgagtcccaatggtgttgtccctagacaagcattttaccatatgaacccaccaatgctacctaatggtgctgggtttggtatggaggagatgccaaaaccacgaggaactggaacatactttcccaatacgaaccattacagagataggcccatgacaacaaggggaagaaatcaagtaccagtgaggtctcctcgtaacaatggccatgccatgataccacctccagaaaataattttcctgacagaaacagtcgtgagctatcacaagcccaaatgcctcttcagaaaggtgggggaaagtttggttctccagatagccccaccaactcccctcgaatgaaagcatatcccaatgccaatgggtcaatacatccttctgatcgaattgtagaatttgggtcagttgagcatgtgccattagaggcaccgcccagtggcaggcaaacaaactcgggatcatcatccagtcaaaattccagtgttggccaagcctcaacaaactcggaattgggtacagatcaagataggatttctgtgcggtcataccgtttgaaagatgaagatgatttcccaccgttatcagcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

873

Amino Acids

96.09

Weight (kDa)

5.58

Isoelectric Point (pI)

49.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008549)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51620 AT3G51620 AT3G51620
fragaria_vesca	FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110 FvH4_6g10110
malus_domestica	MD04G1172800.v1.1 MD12G1186100.v1.1
prunus_persica	Prupe.6G291600_v2.0.a1
pyrus_communis	pycom04g15270 pycom12g17470
rosa_chinensis	RchiOBHm_Chr3g0460811
rosa_laevigata	RLG00000024979
rosa_multiflora	Rmu_sc0007678.1_g000014
rosa_roxburghii	Rroxscaffold_6G00419200
rosa_rugosa	Rorug03G0046500
rosa_samantha	Rh3AG103600 Rh3BG107300 Rh3CG109200 Rh3DG109100
rosa_wichuraiana	Rw3G008820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	508
AccB1I	GGYRCC	2 cut(s)	608, 2458
AccB7I	CCANNNNNTGG	1 cut(s)	821
AccBSI	CCGCTC	2 cut(s)	122, 178
AccI	GTMKAC	1 cut(s)	1993
AciI	CCGC	7 cut(s)	115, 122, 178, 701, 1426, 2462, 2572
AclI	AACGTT	1 cut(s)	1599
AclWI	GGATC	6 cut(s)	262, 941, 1142, 1291, 1651, 2497
AcoI	YGGCCR	4 cut(s)	336, 1891, 2236, 2518
AcsI	RAATTY	6 cut(s)	600, 713, 734, 851, 2426, 2506
AcuI	CTGAAG	4 cut(s)	287, 712, 1785, 2300
AcyI	GRCGYC	2 cut(s)	39, 812
AfaI	GTAC	6 cut(s)	261, 499, 1317, 1964, 2211, 2548
AfeI	AGCGCT	1 cut(s)	1015
AfiI	CCNNNNNNNGG	7 cut(s)	102, 821, 893, 1435, 1514, 2468, 2472
AgsI	TTSAA	9 cut(s)	87, 93, 362, 478, 766, 891, 1245, 1485, 2587
AjiI	CACGTC	1 cut(s)	169
AjnI	CCWGG	2 cut(s)	1318, 1668
AjuI	GAANNNNNNNTTGG	4 cut(s)	1137, 1169, 2298, 2330
AloI	GAACNNNNNNTCC	2 cut(s)	2137, 2169
Alw21I	GWGCWC	2 cut(s)	1033, 1920
Alw26I	GTCTC	6 cut(s)	175, 638, 803, 896, 1536, 2226
AlwI	GGATC	6 cut(s)	262, 941, 1142, 1291, 1651, 2497
Ama87I	CYCGRG	1 cut(s)	2485
Aor51HI	AGCGCT	1 cut(s)	1015
AoxI	GGCC	8 cut(s)	14, 189, 336, 1133, 1891, 2180, 2236, 2518
ApeKI	GCWGC	3 cut(s)	383, 1942, 2005
ApoI	RAATTY	6 cut(s)	600, 713, 734, 851, 2426, 2506
AseI	ATTAAT	1 cut(s)	1311
AspLEI	GCGC	2 cut(s)	1016, 1047
AspS9I	GGNCC	6 cut(s)	154, 692, 703, 770, 1337, 2181
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	4 cut(s)	409, 842, 1529, 2019
AvaI	CYCGRG	1 cut(s)	2485
AvaII	GGWCC	5 cut(s)	154, 692, 703, 770, 1337
BaeGI	GKGCMC	1 cut(s)	613
BaeI	ACNNNNGTAYC	2 cut(s)	739, 772
BalI	TGGCCA	3 cut(s)	338, 2238, 2520
BanI	GGYRCC	2 cut(s)	608, 2458
BanII	GRGCYC	1 cut(s)	1920
BauI	CACGAG	1 cut(s)	2133
BbsI	GAAGAC	3 cut(s)	60, 275, 1773
Bbv12I	GWGCWC	2 cut(s)	1033, 1920
BbvCI	CCTCAGC	1 cut(s)	423
BbvI	GCAGC	3 cut(s)	370, 1954, 2017
BccI	CCATC	9 cut(s)	278, 621, 675, 1165, 1166, 1286, 1510, 1883, 1938
BceAI	ACGGC	3 cut(s)	52, 176, 1878
BcgI	CGANNNNNNTGC	6 cut(s)	398, 432, 506, 540, 1904, 1938
BciT130I	CCWGG	2 cut(s)	1320, 1670
BciVI	GTATCC	1 cut(s)	1375
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	6 cut(s)	175, 638, 803, 896, 1536, 2226
BfaI	CTAG	6 cut(s)	698, 1040, 1430, 1451, 1779, 2055
BfoI	RGCGCY	1 cut(s)	1017
BfuAI	ACCTGC	1 cut(s)	508
BfuI	GTATCC	1 cut(s)	1375
BglI	GCCNNNNNGGC	1 cut(s)	534
BisI	GCNGC	4 cut(s)	384, 1426, 1943, 2006
BlsI	GCNGC	4 cut(s)	385, 1427, 1944, 2007
Bme1390I	CCNGG	3 cut(s)	281, 1320, 1670
Bme18I	GGWCC	5 cut(s)	154, 692, 703, 770, 1337
BmeT110I	CYCGRG	1 cut(s)	2485
BmgBI	CACGTC	1 cut(s)	169
BmgT120I	GGNCC	6 cut(s)	154, 692, 703, 770, 1337, 2181
BmiI	GGNNCC	4 cut(s)	610, 1396, 1710, 2460
BmrFI	CCNGG	3 cut(s)	281, 1320, 1670
BmrI	ACTGGG	1 cut(s)	2460
BmsI	GCATC	6 cut(s)	940, 1056, 1429, 1480, 1788, 2112
BmuI	ACTGGG	1 cut(s)	2460
BpiI	GAAGAC	3 cut(s)	60, 275, 1773
BplI	GAGNNNNNCTC	6 cut(s)	1382, 1414, 1516, 1548, 2209, 2241
BpmI	CTGGAG	4 cut(s)	533, 1444, 2241, 2328
Bpu10I	CCTNAGC	3 cut(s)	27, 150, 423
BpuMI	CCSGG	1 cut(s)	281
BsaAI	YACGTR	1 cut(s)	1886
BsaBI	GATNNNNATC	4 cut(s)	294, 1617, 1677, 2494
BsaHI	GRCGYC	2 cut(s)	39, 812
BsaI	GGTCTC	2 cut(s)	638, 2226
BsaJI	CCNNGG	2 cut(s)	17, 970
Bsc4I	CCNNNNNNNGG	7 cut(s)	102, 821, 893, 1435, 1514, 2468, 2472
Bse118I	RCCGGY	1 cut(s)	1247
Bse1I	ACTGG	9 cut(s)	116, 339, 773, 1819, 2146, 2213, 2466, 2499, 2511
Bse8I	GATNNNNATC	4 cut(s)	294, 1617, 1677, 2494
BseBI	CCWGG	2 cut(s)	1320, 1670
BseDI	CCNNGG	2 cut(s)	17, 970
BseJI	GATNNNNATC	4 cut(s)	294, 1617, 1677, 2494
BseLI	CCNNNNNNNGG	7 cut(s)	102, 821, 893, 1435, 1514, 2468, 2472
BseNI	ACTGG	9 cut(s)	116, 339, 773, 1819, 2146, 2213, 2466, 2499, 2511
BseRI	GAGGAG	5 cut(s)	65, 140, 341, 2132, 2214
BseSI	GKGCMC	1 cut(s)	613
BseXI	GCAGC	3 cut(s)	370, 1954, 2017
BseYI	CCCAGC	2 cut(s)	1056, 2102
BsgI	GTGCAG	3 cut(s)	428, 1961, 2024
BshFI	GGCC	8 cut(s)	16, 191, 338, 1135, 1893, 2182, 2238, 2520
BshNI	GGYRCC	2 cut(s)	608, 2458
BsiHKAI	GWGCWC	2 cut(s)	1033, 1920
BsiHKCI	CYCGRG	1 cut(s)	2485
BsiSI	CCGG	3 cut(s)	281, 1136, 1248
BslFI	GGGAC	3 cut(s)	758, 2022, 2036
BslI	CCNNNNNNNGG	7 cut(s)	102, 821, 893, 1435, 1514, 2468, 2472
BsmAI	GTCTC	6 cut(s)	175, 638, 803, 896, 1536, 2226
BsmBI	CGTCTC	2 cut(s)	175, 803
BsmFI	GGGAC	3 cut(s)	758, 2022, 2036
BsmI	GAATGC	2 cut(s)	1744, 2023
BsnI	GGCC	8 cut(s)	16, 191, 338, 1135, 1893, 2182, 2238, 2520
Bso31I	GGTCTC	2 cut(s)	638, 2226
BsoBI	CYCGRG	1 cut(s)	2485
Bsp1286I	GDGCHC	3 cut(s)	613, 1033, 1920
BspACI	CCGC	7 cut(s)	115, 122, 178, 701, 1426, 2462, 2572
BspANI	GGCC	8 cut(s)	16, 191, 338, 1135, 1893, 2182, 2238, 2520
BspHI	TCATGA	2 cut(s)	1276, 1468
BspLI	GGNNCC	4 cut(s)	610, 1396, 1710, 2460
BspMI	ACCTGC	1 cut(s)	508
BspPI	GGATC	6 cut(s)	262, 941, 1142, 1291, 1651, 2497
BspT107I	GGYRCC	2 cut(s)	608, 2458
BspTNI	GGTCTC	2 cut(s)	638, 2226
BsrBI	CCGCTC	2 cut(s)	122, 178
BsrFI	RCCGGY	1 cut(s)	1247
BsrI	ACTGG	9 cut(s)	116, 339, 773, 1819, 2146, 2213, 2466, 2499, 2511
BssAI	RCCGGY	1 cut(s)	1247
BssECI	CCNNGG	2 cut(s)	17, 970
BssNI	GRCGYC	2 cut(s)	39, 812
BssSI	CACGAG	1 cut(s)	2133
BssT1I	CCWWGG	2 cut(s)	17, 970
Bst2BI	CACGAG	1 cut(s)	2133
Bst2UI	CCWGG	2 cut(s)	1320, 1670
Bst4CI	ACNGT	6 cut(s)	620, 1962, 1998, 2285, 2582, 2610
Bst6I	CTCTTC	2 cut(s)	1059, 2319
BstACI	GRCGYC	2 cut(s)	39, 812
BstBAI	YACGTR	1 cut(s)	1886
BstC8I	GCNNGC	2 cut(s)	1742, 2474
BstEII	GGTNACC	1 cut(s)	1664
BstH2I	RGCGCY	1 cut(s)	1017
BstHHI	GCGC	2 cut(s)	1016, 1047
BstMAI	GTCTC	6 cut(s)	175, 638, 803, 896, 1536, 2226
BstMWI	GCNNNNNNNGC	5 cut(s)	22, 128, 534, 1899, 1951
BstNI	CCWGG	2 cut(s)	1320, 1670
BstNSI	RCATGY	1 cut(s)	2447
BstPI	GGTNACC	1 cut(s)	1664
BstSCI	CCNGG	3 cut(s)	279, 1318, 1668
BstSLI	GKGCMC	1 cut(s)	613
BstV1I	GCAGC	3 cut(s)	370, 1954, 2017
BstV2I	GAAGAC	3 cut(s)	60, 275, 1773
BstX2I	RGATCY	2 cut(s)	1147, 1283
BstYI	RGATCY	2 cut(s)	1147, 1283
BsuI	GTATCC	1 cut(s)	1375
BsuRI	GGCC	8 cut(s)	16, 191, 338, 1135, 1893, 2182, 2238, 2520
BtrI	CACGTC	1 cut(s)	169
BtsIMutI	CAGTG	6 cut(s)	332, 1071, 1858, 2220, 2473, 2518
BveI	ACCTGC	1 cut(s)	508
Cac8I	GCNNGC	2 cut(s)	1742, 2474
CciI	TCATGA	2 cut(s)	1276, 1468
CfoI	GCGC	2 cut(s)	1016, 1047
Cfr10I	RCCGGY	1 cut(s)	1247
Cfr13I	GGNCC	6 cut(s)	154, 692, 703, 770, 1337, 2181
CseI	GACGC	3 cut(s)	28, 142, 820
CsiI	ACCWGGT	1 cut(s)	1318
Csp6I	GTAC	6 cut(s)	260, 498, 1316, 1963, 2210, 2547
CviAII	CATG	9 cut(s)	1118, 1277, 1469, 1899, 1980, 2185, 2240, 2245, 2444
CviQI	GTAC	6 cut(s)	260, 498, 1316, 1963, 2210, 2547
DraI	TTTAAA	1 cut(s)	553
EaeI	YGGCCR	4 cut(s)	336, 1891, 2236, 2518
Eam1104I	CTCTTC	2 cut(s)	1059, 2319
EarI	CTCTTC	2 cut(s)	1059, 2319
EciI	GGCGGA	1 cut(s)	130
Ecl136II	GAGCTC	1 cut(s)	1918
Eco130I	CCWWGG	2 cut(s)	17, 970
Eco147I	AGGCCT	1 cut(s)	16
Eco24I	GRGCYC	1 cut(s)	1920
Eco31I	GGTCTC	2 cut(s)	638, 2226
Eco32I	GATATC	1 cut(s)	627
Eco47I	GGWCC	5 cut(s)	154, 692, 703, 770, 1337
Eco47III	AGCGCT	1 cut(s)	1015
Eco53kI	GAGCTC	1 cut(s)	1918
Eco57I	CTGAAG	4 cut(s)	287, 712, 1785, 2300
Eco88I	CYCGRG	1 cut(s)	2485
Eco91I	GGTNACC	1 cut(s)	1664
EcoICRI	GAGCTC	1 cut(s)	1918
EcoO65I	GGTNACC	1 cut(s)	1664
EcoRI	GAATTC	1 cut(s)	600
EcoRII	CCWGG	2 cut(s)	1318, 1668
EcoRV	GATATC	1 cut(s)	627
EcoT14I	CCWWGG	2 cut(s)	17, 970
EcoT22I	ATGCAT	2 cut(s)	1912, 2023
EcoT38I	GRGCYC	1 cut(s)	1920
ErhI	CCWWGG	2 cut(s)	17, 970
Esp3I	CGTCTC	2 cut(s)	175, 803
FaeI	CATG	9 cut(s)	1121, 1280, 1472, 1902, 1983, 2188, 2243, 2248, 2447
FalI	AAGNNNNNCTT	2 cut(s)	1000, 1032
FaqI	GGGAC	3 cut(s)	758, 2022, 2036
FatI	CATG	9 cut(s)	1117, 1276, 1468, 1898, 1979, 2184, 2239, 2244, 2443
FauNDI	CATATG	3 cut(s)	634, 1024, 2073
FblI	GTMKAC	1 cut(s)	1993
Fnu4HI	GCNGC	4 cut(s)	384, 1426, 1943, 2006
FriOI	GRGCYC	1 cut(s)	1920
Fsp4HI	GCNGC	4 cut(s)	384, 1426, 1943, 2006
FspBI	CTAG	6 cut(s)	698, 1040, 1430, 1451, 1779, 2055
GlaI	GCGC	2 cut(s)	1015, 1046
GluI	GCNGC	4 cut(s)	384, 1426, 1943, 2006
GsaI	CCCAGC	2 cut(s)	1060, 2106
GsuI	CTGGAG	4 cut(s)	533, 1444, 2241, 2328
HaeII	RGCGCY	1 cut(s)	1017
HaeIII	GGCC	8 cut(s)	16, 191, 338, 1135, 1893, 2182, 2238, 2520
HapII	CCGG	3 cut(s)	281, 1136, 1248
HgaI	GACGC	3 cut(s)	28, 142, 820
HhaI	GCGC	2 cut(s)	1016, 1047
Hin1I	GRCGYC	2 cut(s)	39, 812
Hin1II	CATG	9 cut(s)	1121, 1280, 1472, 1902, 1983, 2188, 2243, 2248, 2447
Hin6I	GCGC	2 cut(s)	1014, 1045
HinP1I	GCGC	2 cut(s)	1014, 1045
HincII	GTYRAC	1 cut(s)	1994
HindII	GTYRAC	1 cut(s)	1994
HindIII	AAGCTT	2 cut(s)	431, 1636
HinfI	GANTC	8 cut(s)	329, 595, 1226, 1232, 1262, 1678, 1700, 2035
HpaII	CCGG	3 cut(s)	281, 1136, 1248
HphI	GGTGA	4 cut(s)	409, 842, 1529, 2019
Hpy166II	GTNNAC	4 cut(s)	1127, 1340, 1380, 1994
Hpy8I	GTNNAC	4 cut(s)	1127, 1340, 1380, 1994
Hpy99I	CGWCG	2 cut(s)	44, 136
HpyAV	CCTTC	7 cut(s)	177, 181, 362, 394, 484, 897, 2418
HpyCH4III	ACNGT	6 cut(s)	620, 1962, 1998, 2285, 2582, 2610
HpyCH4IV	ACGT	7 cut(s)	168, 204, 272, 500, 556, 1599, 1885
HpyF10VI	GCNNNNNNNGC	5 cut(s)	22, 128, 534, 1899, 1951
HpySE526I	ACGT	7 cut(s)	168, 204, 272, 500, 556, 1599, 1885
Hsp92I	GRCGYC	2 cut(s)	39, 812
Hsp92II	CATG	9 cut(s)	1121, 1280, 1472, 1902, 1983, 2188, 2243, 2248, 2447
HspAI	GCGC	2 cut(s)	1014, 1045
LmnI	GCTCC	3 cut(s)	514, 1011, 1714
Lsp1109I	GCAGC	3 cut(s)	370, 1954, 2017
LweI	GCATC	6 cut(s)	940, 1056, 1429, 1480, 1788, 2112
MabI	ACCWGGT	1 cut(s)	1318
MaeI	CTAG	6 cut(s)	698, 1040, 1430, 1451, 1779, 2055
MaeII	ACGT	7 cut(s)	168, 204, 272, 500, 556, 1599, 1885
MaeIII	GTNAC	6 cut(s)	330, 371, 1327, 1664, 1868, 2228
MbiI	CCGCTC	2 cut(s)	122, 178
MflI	RGATCY	2 cut(s)	1147, 1283
MhlI	GDGCHC	3 cut(s)	613, 1033, 1920
MlsI	TGGCCA	3 cut(s)	338, 2238, 2520
MluNI	TGGCCA	3 cut(s)	338, 2238, 2520
MlyI	GAGTC	4 cut(s)	338, 604, 1709, 2044
MmeI	TCCRAC	2 cut(s)	1398, 1696
Mox20I	TGGCCA	3 cut(s)	338, 2238, 2520
Mph1103I	ATGCAT	2 cut(s)	1912, 2023
MscI	TGGCCA	3 cut(s)	338, 2238, 2520
MseI	TTAA	9 cut(s)	413, 429, 552, 573, 936, 954, 1271, 1311, 1988
MslI	CAYNNNNRTG	1 cut(s)	1122
Msp20I	TGGCCA	3 cut(s)	338, 2238, 2520
MspA1I	CMGCKG	1 cut(s)	1649
MspI	CCGG	3 cut(s)	281, 1136, 1248
MspR9I	CCNGG	3 cut(s)	281, 1320, 1670
Mva1269I	GAATGC	2 cut(s)	1744, 2023
MvaI	CCWGG	2 cut(s)	1320, 1670
MwoI	GCNNNNNNNGC	5 cut(s)	22, 128, 534, 1899, 1951
NciI	CCSGG	1 cut(s)	281
NdeI	CATATG	3 cut(s)	634, 1024, 2073
NlaIII	CATG	9 cut(s)	1121, 1280, 1472, 1902, 1983, 2188, 2243, 2248, 2447
NlaIV	GGNNCC	4 cut(s)	610, 1396, 1710, 2460
NmuCI	GTSAC	3 cut(s)	330, 371, 1868
NsiI	ATGCAT	2 cut(s)	1912, 2023
NspI	RCATGY	1 cut(s)	2447
PagI	TCATGA	2 cut(s)	1276, 1468
PceI	AGGCCT	1 cut(s)	16
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 1891
PctI	GAATGC	2 cut(s)	1744, 2023
PfeI	GAWTC	4 cut(s)	1226, 1232, 1262, 1678
PflFI	GACNNNGTC	1 cut(s)	64
PflMI	CCANNNNNTGG	1 cut(s)	821
PfoI	TCCNGGA	1 cut(s)	279
PkrI	GCNGC	4 cut(s)	385, 1427, 1944, 2007
PleI	GAGTC	4 cut(s)	337, 603, 1708, 2043
PpsI	GAGTC	4 cut(s)	337, 603, 1708, 2043
Ppu21I	YACGTR	1 cut(s)	1886
PshBI	ATTAAT	1 cut(s)	1311
Psp124BI	GAGCTC	1 cut(s)	1920
Psp1406I	AACGTT	1 cut(s)	1599
Psp6I	CCWGG	2 cut(s)	1318, 1668
PspEI	GGTNACC	1 cut(s)	1664
PspFI	CCCAGC	2 cut(s)	1056, 2102
PspGI	CCWGG	2 cut(s)	1318, 1668
PspN4I	GGNNCC	4 cut(s)	610, 1396, 1710, 2460
PspPI	GGNCC	6 cut(s)	154, 692, 703, 770, 1337, 2181
PsuI	RGATCY	2 cut(s)	1147, 1283
PsyI	GACNNNGTC	1 cut(s)	64
PvuII	CAGCTG	1 cut(s)	1649
RsaI	GTAC	6 cut(s)	261, 499, 1317, 1964, 2211, 2548
RsaNI	GTAC	6 cut(s)	260, 498, 1316, 1963, 2210, 2547
RseI	CAYNNNNRTG	1 cut(s)	1122
SacI	GAGCTC	1 cut(s)	1920
SalI	GTCGAC	1 cut(s)	1992
SaqAI	TTAA	9 cut(s)	413, 429, 552, 573, 936, 954, 1271, 1311, 1988
SatI	GCNGC	4 cut(s)	384, 1426, 1943, 2006
Sau96I	GGNCC	6 cut(s)	154, 692, 703, 770, 1337, 2181
SchI	GAGTC	4 cut(s)	338, 604, 1709, 2044
ScrFI	CCNGG	3 cut(s)	281, 1320, 1670
SduI	GDGCHC	3 cut(s)	613, 1033, 1920
SexAI	ACCWGGT	1 cut(s)	1318
SfaNI	GCATC	6 cut(s)	940, 1056, 1429, 1480, 1788, 2112
SinI	GGWCC	5 cut(s)	154, 692, 703, 770, 1337
SmiMI	CAYNNNNRTG	1 cut(s)	1122
SseBI	AGGCCT	1 cut(s)	16
SsiI	CCGC	7 cut(s)	115, 122, 178, 701, 1426, 2462, 2572
SspI	AATATT	2 cut(s)	457, 1309
SspMI	CTAG	6 cut(s)	698, 1040, 1430, 1451, 1779, 2055
SstI	GAGCTC	1 cut(s)	1920
StuI	AGGCCT	1 cut(s)	16
StyD4I	CCNGG	3 cut(s)	279, 1318, 1668
StyI	CCWWGG	2 cut(s)	17, 970
TaaI	ACNGT	6 cut(s)	620, 1962, 1998, 2285, 2582, 2610
TaiI	ACGT	7 cut(s)	171, 207, 275, 503, 559, 1602, 1888
TaqI	TCGA	5 cut(s)	598, 1033, 1993, 2368, 2416
TauI	GCSGC	1 cut(s)	1428
TfiI	GAWTC	4 cut(s)	1226, 1232, 1262, 1678
Tru1I	TTAA	9 cut(s)	413, 429, 552, 573, 936, 954, 1271, 1311, 1988
Tru9I	TTAA	9 cut(s)	413, 429, 552, 573, 936, 954, 1271, 1311, 1988
TscAI	CASTG	6 cut(s)	339, 1078, 1858, 2220, 2473, 2518
TseFI	GTSAC	3 cut(s)	330, 371, 1868
TseI	GCWGC	3 cut(s)	383, 1942, 2005
Tsp45I	GTSAC	3 cut(s)	330, 371, 1868
TspDTI	ATGAA	8 cut(s)	1239, 1457, 1629, 1749, 1887, 2090, 2387, 2607
TspGWI	ACGGA	3 cut(s)	67, 1397, 1419
TspRI	CASTG	6 cut(s)	339, 1078, 1858, 2220, 2473, 2518
Tth111I	GACNNNGTC	1 cut(s)	64
Van91I	CCANNNNNTGG	1 cut(s)	821
VpaK11BI	GGWCC	5 cut(s)	154, 692, 703, 770, 1337
VspI	ATTAAT	1 cut(s)	1311
XapI	RAATTY	6 cut(s)	600, 713, 734, 851, 2426, 2506
XceI	RCATGY	1 cut(s)	2447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	215
XmiI	GTMKAC	1 cut(s)	1993
XspI	CTAG	6 cut(s)	698, 1040, 1430, 1451, 1779, 2055
Zsp2I	ATGCAT	2 cut(s)	1912, 2023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.