Rh3DG109100

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0008549
Physical Location & Seq
Forward (+)
8799555 .. 8805874
6320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG109100.1

Sequence Viewer

Length: 2241 bp
ATGGCTGCTGAGTTTGTGGTGAAGGATGTGCAGTTAATTCGGGCTGAGGTTAAGCTTGTAAAGTGCCTTGTGCAAAATATTGTGGTTGATATATCCTTCAATCAGTTAGGAGGGCTATGTACGTTATGCTTTCTTGAGCAGGTTGATCGCCTCATTGGCAAAGATCATCTCTTTAAACGTAGTATCATACTGATTAAGGCTTGGTGCTATTATGAGAGTCGAATTCTTGGTGCCCATCACGGTTTGATATCTACATATGGTTTGGAGACCTTAGTTCTTTTTATCTTCCATCTATTCCATACATCTCTGAATGGTCCTCTAGCGGTCCTGTATAAATTCTTGGACTACTTCAGTAAATTTGATTGGGACAACTATTGTATCAGCTTGAATGGTCCAGTTCTCATATCCTCACTTCCTGAACTCTCGGCTGAGATGCCGGATAATGGTGGGGGTGATCTGTTGCTCAGTAGCGAATTTCTCAGGAGTTGTGTGGATAGGTTCTCAGTTCCTTCAAGGGGATATGAGACAAATTATAGAACTTTCCAGCCAAAGCATCTTAATATAGTTGATCCACTTAAAGAAAATAACAACCTTGGCAGAAGTGTGAGTAAAGGAAACTTTTACCGAATAAGGAGCGCTTTCACATATGGTGCTCGAAAACTAGGGCGCATCCTTTCCCAGCCTGAAGAGAACACTGATGATGAGATTAGAAAGTTCTTCTCAAACACATTGGACAGGCATGGAAGTGGACAGAGGCCGGATGTCCAAGATCCTATTCCATCATCCAGATATGATGGGTTTGGTTCTGCATTGGGTTCAGAGTTGCAAGAAGATAAAGCAGTTTATGAATCCGAATCTGCTTATTCAACCGGCTTGGTTGGGGATTCTGGGTTAAATCATGAGGGATCTTGGGATGGTGGAGATACAAATATTAATGTACCTGGTCAAGTTACAAATGGTCCACCCAAAAGTGATACAGAGTTAGTATCCCCAACAATGTTTCCGGAAATAGAGGGTTCCTCAAACGGAATTGCTGTTTCGGAGTGCCGCCTAGTTGGGGATGCAAAAGACCTAGCTACCTCCAGATTTCATGACCTTACAATTTCAAATGATGCTCAGAAACCATCCCCGTCCAAAGGTGAAATGAGTATGTCTCCTTTGGGTAAAACTCAACTTGCACCTCATCTTTATTTCTCTCACTCATCAATTCATGGGAACGTTAGTAATGGAGATGAAGATCACGAACTGCCAGAAAGCTTTGGATCAGCTGAGAATGGGGTTGGTAACCAGGATGAGAATCAATCAGCTTGTAATCAGGAGTCTTTGGCTCCTGTTGGACAAAAGCACCAACTTTCACGCTTGCATTCCATTGTGGGTTCATCTGAAGACTTTTATCCTAGTTATTCTGGTTATCGGATGCCAATTAGCACTACTGGAAGTCCTGAAACTTCTAACCCTTTGTCTGATCTCAGTGGGGAATATGATAGTCACTTACATAACCTACGTGATGGCCGTTCATGCTATTATGCATACGAGCTCAATGTAGTCCATCATCCCGTGCAGCCTCCAATGCCCTCACAGTACCAGAGAAGTAAGTCATGGGATGTAAGTCGACAGTCTGTGCAGCTCAGACAGAATGCATTTTCACCAATGAGTCCCAATGGTGTTGTCCCTAGACAAGCATTTTACCATATGAACCCACCAATGCTACCTAATGGTGCTGGGTTTGGTATGGAGGAGATGCCAAAACCACGAGGAACTGGAACATACTTTCCCAATACGAACCATTACAGAGATAGGCCCATGACAACAAGGGGAAGAAATCAAGCACCAGTGAGGTCTCCTCGTAACAATGGCCATGCCATGATACCACCTCCAGAAAATAATTTTCCTGACAGAAACAGTCGTGAGCTATCACAAGCCCAAATGCCTCTTCAAAAAGGTGGGGGAAAGTTTGGTTCTCCAGATAGCCCCACCAACTCCCCTCGAATGAAAGCATATCCCAATGCCAATGGGTCAATACATCCTTCTGATCGAATTGTAGAATTTGGGTCAGTTGAGCATGTGCCATTAGAGGCACATCCCAGTGGCAGGCAAACAAACTCGGGATCATCATCCAGTCAAAATTCCAGTGTTGGCCAAGCCTCAACAAACTCGGAATTGGGTACAGATCAAGATAGGATTTCTGTGCAGTCATACCGTTTGAAAGATGAAGATGATTTCCCACCGTTATCAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

746

Amino Acids

82.3

Weight (kDa)

5.78

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAP-OAS1 PF26180 52 - 244 9.8e-99 PAP/OAS1 substrate-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 130
AccB1I GGYRCC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 1612
AccIII TCCGGA 1 cut(s) 1003
AciI CCGC 2 cut(s) 323, 1048
AclI AACGTT 1 cut(s) 1218
AclWI GGATC 5 cut(s) 563, 764, 913, 1270, 2116
AcoI YGGCCR 3 cut(s) 1510, 1855, 2137
AcsI RAATTY 6 cut(s) 222, 335, 356, 473, 2045, 2125
AcuI CTGAAG 3 cut(s) 334, 705, 1404
AfaI GTAC 4 cut(s) 121, 939, 1583, 2167
AfeI AGCGCT 1 cut(s) 637
AfiI CCNNNNNNNGG 5 cut(s) 443, 515, 1057, 1136, 2091
AgsI TTSAA 7 cut(s) 100, 388, 513, 867, 1107, 1937, 2206
AjnI CCWGG 2 cut(s) 940, 1287
AjuI GAANNNNNNNTTGG 4 cut(s) 759, 791, 1917, 1949
AloI GAACNNNNNNTCC 2 cut(s) 1756, 1788
AluBI AGCT 9 cut(s) 55, 384, 1076, 1257, 1268, 1307, 1537, 1627, 1912
AluI AGCT 9 cut(s) 55, 384, 1076, 1257, 1268, 1307, 1537, 1627, 1912
Alw21I GWGCWC 2 cut(s) 655, 1539
Alw26I GTCTC 4 cut(s) 260, 518, 1158, 1845
AlwI GGATC 5 cut(s) 563, 764, 913, 1270, 2116
Ama87I CYCGRG 1 cut(s) 2104
Aor13HI TCCGGA 1 cut(s) 1003
Aor51HI AGCGCT 1 cut(s) 637
AoxI GGCC 5 cut(s) 755, 1510, 1799, 1855, 2137
ApeKI GCWGC 3 cut(s) 5, 1561, 1624
ApoI RAATTY 6 cut(s) 222, 335, 356, 473, 2045, 2125
AseI ATTAAT 1 cut(s) 933
AspLEI GCGC 2 cut(s) 638, 669
AspS9I GGNCC 5 cut(s) 314, 325, 392, 959, 1800
AsuHPI GGTGA 4 cut(s) 31, 464, 1151, 1638
AvaI CYCGRG 1 cut(s) 2104
AvaII GGWCC 4 cut(s) 314, 325, 392, 959
BaeGI GKGCMC 1 cut(s) 235
BaeI ACNNNNGTAYC 2 cut(s) 361, 394
BalI TGGCCA 2 cut(s) 1857, 2139
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 1539
BauI CACGAG 1 cut(s) 1752
BbsI GAAGAC 1 cut(s) 1392
Bbv12I GWGCWC 2 cut(s) 655, 1539
BbvCI CCTCAGC 1 cut(s) 45
BbvI GCAGC 2 cut(s) 1573, 1636
BccI CCATC 8 cut(s) 243, 297, 787, 788, 908, 1132, 1502, 1557
BceAI ACGGC 1 cut(s) 1497
BcgI CGANNNNNNTGC 4 cut(s) 20, 54, 128, 162
BciT130I CCWGG 2 cut(s) 942, 1289
BciVI GTATCC 1 cut(s) 997
BcoDI GTCTC 4 cut(s) 260, 518, 1158, 1845
BfaI CTAG 6 cut(s) 320, 662, 1052, 1073, 1398, 1674
BfoI RGCGCY 1 cut(s) 639
BfuAI ACCTGC 1 cut(s) 130
BfuI GTATCC 1 cut(s) 997
BglI GCCNNNNNGGC 1 cut(s) 156
BisI GCNGC 4 cut(s) 6, 1048, 1562, 1625
BlsI GCNGC 4 cut(s) 7, 1049, 1563, 1626
Bme1390I CCNGG 2 cut(s) 942, 1289
Bme18I GGWCC 4 cut(s) 314, 325, 392, 959
BmeT110I CYCGRG 1 cut(s) 2104
BmgT120I GGNCC 5 cut(s) 314, 325, 392, 959, 1800
BmiI GGNNCC 3 cut(s) 232, 1018, 1329
BmrFI CCNGG 2 cut(s) 942, 1289
BmrI ACTGGG 1 cut(s) 2079
BmsI GCATC 7 cut(s) 423, 562, 678, 1051, 1102, 1407, 1731
BmuI ACTGGG 1 cut(s) 2079
BpiI GAAGAC 1 cut(s) 1392
BplI GAGNNNNNCTC 6 cut(s) 1004, 1036, 1138, 1170, 1828, 1860
BpmI CTGGAG 3 cut(s) 1066, 1860, 1947
Bpu10I CCTNAGC 1 cut(s) 45
BpuEI CTTGAG 1 cut(s) 155
BsaAI YACGTR 1 cut(s) 1505
BsaBI GATNNNNATC 3 cut(s) 1236, 1296, 2113
BsaI GGTCTC 2 cut(s) 260, 1845
BsaJI CCNNGG 1 cut(s) 592
BsaWI WCCGGW 1 cut(s) 1003
Bsc4I CCNNNNNNNGG 5 cut(s) 443, 515, 1057, 1136, 2091
Bse118I RCCGGY 1 cut(s) 869
Bse1I ACTGG 7 cut(s) 395, 1438, 1765, 1832, 2085, 2118, 2130
Bse8I GATNNNNATC 3 cut(s) 1236, 1296, 2113
BseAI TCCGGA 1 cut(s) 1003
BseBI CCWGG 2 cut(s) 942, 1289
BseDI CCNNGG 1 cut(s) 592
BseJI GATNNNNATC 3 cut(s) 1236, 1296, 2113
BseLI CCNNNNNNNGG 5 cut(s) 443, 515, 1057, 1136, 2091
BseMII CTCAG 9 cut(s) 36, 420, 478, 493, 516, 1130, 1260, 1483, 1642
BseNI ACTGG 7 cut(s) 395, 1438, 1765, 1832, 2085, 2118, 2130
BseRI GAGGAG 2 cut(s) 1751, 1833
BseSI GKGCMC 1 cut(s) 235
BseXI GCAGC 2 cut(s) 1573, 1636
BseYI CCCAGC 2 cut(s) 678, 1721
BsgI GTGCAG 4 cut(s) 50, 1580, 1643, 2210
BshFI GGCC 5 cut(s) 757, 1512, 1801, 1857, 2139
BshNI GGYRCC 1 cut(s) 230
BsiHKAI GWGCWC 2 cut(s) 655, 1539
BsiHKCI CYCGRG 1 cut(s) 2104
BsiSI CCGG 4 cut(s) 437, 758, 870, 1004
BslFI GGGAC 3 cut(s) 380, 1641, 1655
BslI CCNNNNNNNGG 5 cut(s) 443, 515, 1057, 1136, 2091
BsmAI GTCTC 4 cut(s) 260, 518, 1158, 1845
BsmFI GGGAC 3 cut(s) 380, 1641, 1655
BsmI GAATGC 2 cut(s) 1363, 1642
BsnI GGCC 5 cut(s) 757, 1512, 1801, 1857, 2139
Bso31I GGTCTC 2 cut(s) 260, 1845
BsoBI CYCGRG 1 cut(s) 2104
Bsp1286I GDGCHC 3 cut(s) 235, 655, 1539
Bsp13I TCCGGA 1 cut(s) 1003
BspACI CCGC 2 cut(s) 323, 1048
BspANI GGCC 5 cut(s) 757, 1512, 1801, 1857, 2139
BspCNI CTCAG 9 cut(s) 37, 421, 477, 492, 515, 1129, 1261, 1482, 1641
BspEI TCCGGA 1 cut(s) 1003
BspHI TCATGA 2 cut(s) 898, 1090
BspLI GGNNCC 3 cut(s) 232, 1018, 1329
BspMI ACCTGC 1 cut(s) 130
BspPI GGATC 5 cut(s) 563, 764, 913, 1270, 2116
BspT107I GGYRCC 1 cut(s) 230
BspTNI GGTCTC 2 cut(s) 260, 1845
BsrFI RCCGGY 1 cut(s) 869
BsrI ACTGG 7 cut(s) 395, 1438, 1765, 1832, 2085, 2118, 2130
BssAI RCCGGY 1 cut(s) 869
BssECI CCNNGG 1 cut(s) 592
BssSI CACGAG 1 cut(s) 1752
BssT1I CCWWGG 1 cut(s) 592
Bst2BI CACGAG 1 cut(s) 1752
Bst2UI CCWGG 2 cut(s) 942, 1289
Bst4CI ACNGT 6 cut(s) 242, 1581, 1617, 1904, 2201, 2229
Bst6I CTCTTC 2 cut(s) 681, 1938
BstBAI YACGTR 1 cut(s) 1505
BstC8I GCNNGC 2 cut(s) 1361, 2093
BstEII GGTNACC 1 cut(s) 1283
BstH2I RGCGCY 1 cut(s) 639
BstHHI GCGC 2 cut(s) 638, 669
BstMAI GTCTC 4 cut(s) 260, 518, 1158, 1845
BstMWI GCNNNNNNNGC 3 cut(s) 156, 1518, 1570
BstNI CCWGG 2 cut(s) 942, 1289
BstNSI RCATGY 1 cut(s) 2066
BstPI GGTNACC 1 cut(s) 1283
BstSCI CCNGG 2 cut(s) 940, 1287
BstSLI GKGCMC 1 cut(s) 235
BstV1I GCAGC 2 cut(s) 1573, 1636
BstV2I GAAGAC 1 cut(s) 1392
BstX2I RGATCY 2 cut(s) 769, 905
BstYI RGATCY 2 cut(s) 769, 905
BsuI GTATCC 1 cut(s) 997
BsuRI GGCC 5 cut(s) 757, 1512, 1801, 1857, 2139
BtsIMutI CAGTG 5 cut(s) 693, 1477, 1839, 2092, 2137
BveI ACCTGC 1 cut(s) 130
Cac8I GCNNGC 2 cut(s) 1361, 2093
CciI TCATGA 2 cut(s) 898, 1090
CfoI GCGC 2 cut(s) 638, 669
Cfr10I RCCGGY 1 cut(s) 869
Cfr13I GGNCC 5 cut(s) 314, 325, 392, 959, 1800
CsiI ACCWGGT 1 cut(s) 940
Csp6I GTAC 4 cut(s) 120, 938, 1582, 2166
CviQI GTAC 4 cut(s) 120, 938, 1582, 2166
DraI TTTAAA 1 cut(s) 175
EaeI YGGCCR 3 cut(s) 1510, 1855, 2137
Eam1104I CTCTTC 2 cut(s) 681, 1938
EarI CTCTTC 2 cut(s) 681, 1938
Ecl136II GAGCTC 1 cut(s) 1537
Eco130I CCWWGG 1 cut(s) 592
Eco24I GRGCYC 1 cut(s) 1539
Eco31I GGTCTC 2 cut(s) 260, 1845
Eco32I GATATC 1 cut(s) 249
Eco47I GGWCC 4 cut(s) 314, 325, 392, 959
Eco47III AGCGCT 1 cut(s) 637
Eco53kI GAGCTC 1 cut(s) 1537
Eco57I CTGAAG 3 cut(s) 334, 705, 1404
Eco88I CYCGRG 1 cut(s) 2104
Eco91I GGTNACC 1 cut(s) 1283
EcoICRI GAGCTC 1 cut(s) 1537
EcoO65I GGTNACC 1 cut(s) 1283
EcoRI GAATTC 1 cut(s) 222
EcoRII CCWGG 2 cut(s) 940, 1287
EcoRV GATATC 1 cut(s) 249
EcoT14I CCWWGG 1 cut(s) 592
EcoT22I ATGCAT 2 cut(s) 1531, 1642
EcoT38I GRGCYC 1 cut(s) 1539
ErhI CCWWGG 1 cut(s) 592
FalI AAGNNNNNCTT 2 cut(s) 622, 654
FaqI GGGAC 3 cut(s) 380, 1641, 1655
FauNDI CATATG 3 cut(s) 256, 646, 1692
FblI GTMKAC 1 cut(s) 1612
Fnu4HI GCNGC 4 cut(s) 6, 1048, 1562, 1625
FriOI GRGCYC 1 cut(s) 1539
Fsp4HI GCNGC 4 cut(s) 6, 1048, 1562, 1625
FspBI CTAG 6 cut(s) 320, 662, 1052, 1073, 1398, 1674
GlaI GCGC 2 cut(s) 637, 668
GluI GCNGC 4 cut(s) 6, 1048, 1562, 1625
GsaI CCCAGC 2 cut(s) 682, 1725
GsuI CTGGAG 3 cut(s) 1066, 1860, 1947
HaeII RGCGCY 1 cut(s) 639
HaeIII GGCC 5 cut(s) 757, 1512, 1801, 1857, 2139
HapII CCGG 4 cut(s) 437, 758, 870, 1004
HhaI GCGC 2 cut(s) 638, 669
Hin6I GCGC 2 cut(s) 636, 667
HinP1I GCGC 2 cut(s) 636, 667
HincII GTYRAC 1 cut(s) 1613
HindII GTYRAC 1 cut(s) 1613
HindIII AAGCTT 2 cut(s) 53, 1255
HinfI GANTC 7 cut(s) 217, 848, 854, 884, 1297, 1319, 1654
HpaII CCGG 4 cut(s) 437, 758, 870, 1004
HphI GGTGA 4 cut(s) 31, 464, 1151, 1638
Hpy166II GTNNAC 3 cut(s) 749, 962, 1613
Hpy8I GTNNAC 3 cut(s) 749, 962, 1613
HpyAV CCTTC 4 cut(s) 16, 106, 519, 2037
HpyCH4III ACNGT 6 cut(s) 242, 1581, 1617, 1904, 2201, 2229
HpyCH4IV ACGT 4 cut(s) 122, 178, 1218, 1504
HpyF10VI GCNNNNNNNGC 3 cut(s) 156, 1518, 1570
HpySE526I ACGT 4 cut(s) 122, 178, 1218, 1504
HspAI GCGC 2 cut(s) 636, 667
Kpn2I TCCGGA 1 cut(s) 1003
LmnI GCTCC 2 cut(s) 633, 1333
Lsp1109I GCAGC 2 cut(s) 1573, 1636
LweI GCATC 7 cut(s) 423, 562, 678, 1051, 1102, 1407, 1731
MabI ACCWGGT 1 cut(s) 940
MaeI CTAG 6 cut(s) 320, 662, 1052, 1073, 1398, 1674
MaeII ACGT 4 cut(s) 122, 178, 1218, 1504
MaeIII GTNAC 4 cut(s) 949, 1283, 1487, 1847
MboII GAAGA 9 cut(s) 277, 698, 709, 842, 1247, 1397, 1830, 1925, 2225
MflI RGATCY 2 cut(s) 769, 905
MhlI GDGCHC 3 cut(s) 235, 655, 1539
MlsI TGGCCA 2 cut(s) 1857, 2139
MluNI TGGCCA 2 cut(s) 1857, 2139
MlyI GAGTC 3 cut(s) 226, 1328, 1663
MmeI TCCRAC 1 cut(s) 1315
Mox20I TGGCCA 2 cut(s) 1857, 2139
Mph1103I ATGCAT 2 cut(s) 1531, 1642
MroI TCCGGA 1 cut(s) 1003
MscI TGGCCA 2 cut(s) 1857, 2139
MseI TTAA 8 cut(s) 35, 51, 174, 195, 558, 576, 893, 933
MslI CAYNNNNRTG 2 cut(s) 744, 2085
Msp20I TGGCCA 2 cut(s) 1857, 2139
MspA1I CMGCKG 1 cut(s) 1268
MspI CCGG 4 cut(s) 437, 758, 870, 1004
MspR9I CCNGG 2 cut(s) 942, 1289
Mva1269I GAATGC 2 cut(s) 1363, 1642
MvaI CCWGG 2 cut(s) 942, 1289
MwoI GCNNNNNNNGC 3 cut(s) 156, 1518, 1570
NdeI CATATG 3 cut(s) 256, 646, 1692
NlaIV GGNNCC 3 cut(s) 232, 1018, 1329
NmeAIII GCCGAG 1 cut(s) 404
NmuCI GTSAC 1 cut(s) 1487
NsiI ATGCAT 2 cut(s) 1531, 1642
NspI RCATGY 1 cut(s) 2066
PagI TCATGA 2 cut(s) 898, 1090
PcsI WCGNNNNNNNCGW 1 cut(s) 1510
PctI GAATGC 2 cut(s) 1363, 1642
PfeI GAWTC 4 cut(s) 848, 854, 884, 1297
PkrI GCNGC 4 cut(s) 7, 1049, 1563, 1626
PleI GAGTC 3 cut(s) 225, 1327, 1662
PpsI GAGTC 3 cut(s) 225, 1327, 1662
Ppu21I YACGTR 1 cut(s) 1505
PshBI ATTAAT 1 cut(s) 933
Psp124BI GAGCTC 1 cut(s) 1539
Psp1406I AACGTT 1 cut(s) 1218
Psp6I CCWGG 2 cut(s) 940, 1287
PspEI GGTNACC 1 cut(s) 1283
PspFI CCCAGC 2 cut(s) 678, 1721
PspGI CCWGG 2 cut(s) 940, 1287
PspN4I GGNNCC 3 cut(s) 232, 1018, 1329
PspPI GGNCC 5 cut(s) 314, 325, 392, 959, 1800
PsuI RGATCY 2 cut(s) 769, 905
PvuII CAGCTG 1 cut(s) 1268
RsaI GTAC 4 cut(s) 121, 939, 1583, 2167
RsaNI GTAC 4 cut(s) 120, 938, 1582, 2166
RseI CAYNNNNRTG 2 cut(s) 744, 2085
SacI GAGCTC 1 cut(s) 1539
SalI GTCGAC 1 cut(s) 1611
SaqAI TTAA 8 cut(s) 35, 51, 174, 195, 558, 576, 893, 933
SatI GCNGC 4 cut(s) 6, 1048, 1562, 1625
Sau96I GGNCC 5 cut(s) 314, 325, 392, 959, 1800
SchI GAGTC 3 cut(s) 226, 1328, 1663
ScrFI CCNGG 2 cut(s) 942, 1289
SduI GDGCHC 3 cut(s) 235, 655, 1539
SexAI ACCWGGT 1 cut(s) 940
SfaNI GCATC 7 cut(s) 423, 562, 678, 1051, 1102, 1407, 1731
SinI GGWCC 4 cut(s) 314, 325, 392, 959
SmiMI CAYNNNNRTG 2 cut(s) 744, 2085
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
SsiI CCGC 2 cut(s) 323, 1048
SspI AATATT 2 cut(s) 79, 931
SspMI CTAG 6 cut(s) 320, 662, 1052, 1073, 1398, 1674
SstI GAGCTC 1 cut(s) 1539
StyD4I CCNGG 2 cut(s) 940, 1287
StyI CCWWGG 1 cut(s) 592
TaaI ACNGT 6 cut(s) 242, 1581, 1617, 1904, 2201, 2229
TaiI ACGT 4 cut(s) 125, 181, 1221, 1507
TaqI TCGA 5 cut(s) 220, 655, 1612, 1987, 2035
TauI GCSGC 1 cut(s) 1050
TfiI GAWTC 4 cut(s) 848, 854, 884, 1297
Tru1I TTAA 8 cut(s) 35, 51, 174, 195, 558, 576, 893, 933
Tru9I TTAA 8 cut(s) 35, 51, 174, 195, 558, 576, 893, 933
TscAI CASTG 5 cut(s) 700, 1477, 1839, 2092, 2137
TseFI GTSAC 1 cut(s) 1487
TseI GCWGC 3 cut(s) 5, 1561, 1624
Tsp45I GTSAC 1 cut(s) 1487
TspDTI ATGAA 9 cut(s) 861, 1079, 1199, 1248, 1368, 1506, 1709, 2006, 2226
TspGWI ACGGA 1 cut(s) 1041
TspRI CASTG 5 cut(s) 700, 1477, 1839, 2092, 2137
VpaK11BI GGWCC 4 cut(s) 314, 325, 392, 959
VspI ATTAAT 1 cut(s) 933
XapI RAATTY 6 cut(s) 222, 335, 356, 473, 2045, 2125
XceI RCATGY 1 cut(s) 2066
XmiI GTMKAC 1 cut(s) 1612
XspI CTAG 6 cut(s) 320, 662, 1052, 1073, 1398, 1674
Zsp2I ATGCAT 2 cut(s) 1531, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.