FvH4_6g10110

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0008549
Physical Location & Seq
Forward (+)
5984089 .. 5990056
5968 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g10110.t5

Sequence Viewer

Length: 2637 bp
ATGGGCGATCTTAGGGCTTGCTCGCCTGAGCCAAACGGCGCCGTTTTGGAGGACAGGCCGACCTCGTCTTCGTCGTCGTCGCTACCGTCGTCTTCTTCGTCGTTGCTTTCAGTTTCGACCGCCGAGTACTGGCGGCGAGCGGAGGCGGCGACGCAGGGGGTTATAGCTCAGGTCCAGCCCACTGACGTGTCTGAACGGAGAAGGCGAGCCGTCATTGATTACGTCCAGCGGCTCATTCGAGGCTTTCTTGGCTGTGAGGTGTTCCCGTTTGGATCAGTGCCTCTGAAGACGTATCTGCCTGATGGGGATATTGATCTGACTGCTTTTGGTGGTCTCAATATCGACGAGGTACTGGCGAATGATGTATGTGCTGTTCTTGAGAGGGAAGATCAGAATATGGCTGCTGAGTTTATGGTGAAGGACGTGCAGTTGATTCGAGCAGAGGTTAAGCTTGTAAAGTGCCTAGTGCAGAATATTGTGGTTGATATATCCTTCAATCAGCTAGGAGGGTTATGTACGTTATGCTTTCTTGAGCAGGTTGATCGGCTCATTGGCAAAGATCATCTCTTTAAACGTAGTATCATACTGATTAAGGCTTGGTGCTATTATGAGAGTCGAATTCTTGGTGCCCATCACGGTTTGATATCTACATATGGTTTGGAGACCTTAGTTCTTTTTATCTTCCATCTATTCCATGCATCTTTGAATGGTCCTCTAGCGGTCCTGTATAAATTCTTGGACTACTTCAGTAAATTTGATTGGGACAACTATTGTATCAGCTTGAATGGTCCAGTTCGCATATCCTCACTTCCTGAACTCTTGACTGAGATGCCAGATAATGGTGGGGGTGATCTATTGCTCAGTAACGAATTTCTCAGGAGTTGTGTGGATAGGTTCTCAGTTCCTTCAAGGGGATATGAGACAAATTATAGAACATTCCAGCCAAAGCATCTTAATATAGTTGATCCCCTAAAAGAAAATAACAACCTTGGCAGAAGTGTGAGTAAAGGAAACTTTTATCGAATAAGGAGTGCTTTCACATATGGTGCTCGTAAACTAGGGCGCATCCTTTCACAGCCAGAAGAAAACATAGATGATGAGTTTAGAAAGTTCTTCTCAAACACATTGGACAGGCATGGAAGTGGACAGAGGCCAGATGTCCAGGATCCTATTCCATTTTCAGGATTTGATGGGTTTGGTTCTGCATTGGGTCCAGAGTTGCAAGAAGATAACACAGTTTATGAATCTGAATCTGCATATTCAACTGGCATGGTTGGCAATTCTGGGTCAAATCATGATGGATCTTGGGATGGTGGAGTTACAAACACTAAAAGACCCGATCAAGTTATGAATGGTCCACCCAAAAGTGATACAGAGGTAGTATCCCCAGCAATGTTTCCGGAAACTGAGGATTCTTCAAACAGAATTGCTGTTTCAGAGTGCCGCCTAGTCGGGGATGCAAAAGACCTAGCTACCTCCAGATTTCATGACCTTAAAATTTCAAATGATGCTCAGGAACCGTCCCCGTCCAGAGGTGAGATGAGTTTGTCTTCTTTGGATAAAAAACAACTTGCACCTCATCTCTGTTTCTCTCACTCGTCAGTGGGAAATGGGAACATTAGTAATGGAGATGAAGACCATGAACAGCCAGAAAGCTTTGGATCAGCTGAGAATGGGGTTGGTAGCCTGAATGAGAATCAATCAGCTTGTAATCTGGAGCTTATGGCTCCAGTTGGACAAAAGCACCAACTTTCACACTTGCATTCAATTGTGGGTTCCTCTGAAGACTTTTATCCTAGTTATTCTGGTTATCGGATGCCAATTAGCATAACTGGAAATCCTGAAACTTCTAACCCTTTGTCTGATCTCAGTGGGGATTACGATAGTCACTTAAATAGTCTACGTTATGGCCGTTCATGCTATGAGTATGAGCTCATTGCAGTCCATAATCCCATGCCACCTTCAATGCCCTCACAGTACCAGAGAAGCAAGTCTTGGGATGTAAGTCGACAGTCTGTGCAGCTCAGACAGAATGCATTTTTGCCAATGAGTCCCAATGGTGTTGTCCCTAGACAAGCATTCTACCATATGAACCAACCAATGCTGCCTAATGGTGCTGGGTTTGGTATGGAGGAGATGCAAAAACCACGAGGAACTGGAACATACTTTCCCAATACGAACCATTACAGAGATAGGCCCATGACAACAAGGGGAAGAAATCAAGCACCTGTGAGGTCTCCTCGTAACAATGGCTATGCCATGATACCATCTCCAGAGAATAATTTTCCTGACAGAAACAGTCATGATCTATCACAAGCCCAAATGCCTCTTCAAAAAGGTGGGGGAAAGTTTGGTTTCCCAGATAGCCCCACCAGCTCCCCTCGAACGAAAGCATACCCCAATGCCAATGGCTCAATACATCCTTATGATCGAGTTACAGAATTTGGGCCAGTTGAGCATGTGCCATTAGAGGCGCCTCCCAGTGGCAGGCAAACAAACTCGGGTTCATCATCTAGTCAAAATTCCAGTGTTGGCCAAGCCTCGACAAACTCGGAATTGAGTACAGATCAAGATAGGATTTCTGTGAAGTCATACCATTTGAAAGATGAAGAGGATTTCCCACCGTTGTCAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

879

Amino Acids

96.97

Weight (kDa)

5.43

Isoelectric Point (pI)

51.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAP-OAS1 PF26180 2 - 100 1e-35 PAP/OAS1 substrate-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 526
AccB1I GGYRCC 3 cut(s) 38, 626, 2473
AccB7I CCANNNNNTGG 1 cut(s) 839
AccBSI CCGCTC 1 cut(s) 140
AccI GTMKAC 2 cut(s) 1900, 2008
AccIII TCCGGA 1 cut(s) 1399
AciI CCGC 7 cut(s) 120, 133, 140, 146, 229, 719, 1444
AclWI GGATC 6 cut(s) 280, 959, 1160, 1173, 1309, 1669
AcoI YGGCCR 2 cut(s) 1909, 2533
AcsI RAATTY 7 cut(s) 618, 731, 752, 869, 1497, 2441, 2521
AcuI CTGAAG 3 cut(s) 305, 730, 1803
AcyI GRCGYC 2 cut(s) 39, 2474
AfaI GTAC 5 cut(s) 128, 351, 517, 1979, 2563
AfiI CCNNNNNNNGG 8 cut(s) 129, 839, 911, 1181, 1453, 1532, 2483, 2487
AflIII ACRYGT 1 cut(s) 186
AjiI CACGTC 2 cut(s) 187, 424
AjnI CCWGG 1 cut(s) 1161
AjuI GAANNNNNNNTTGG 4 cut(s) 1978, 2010, 2313, 2345
AleI CACNNNNGTG 1 cut(s) 185
AloI GAACNNNNNNTCC 2 cut(s) 2152, 2184
Alw21I GWGCWC 2 cut(s) 1051, 1935
Alw26I GTCTC 4 cut(s) 338, 656, 914, 2241
AlwI GGATC 6 cut(s) 280, 959, 1160, 1173, 1309, 1669
Ama87I CYCGRG 1 cut(s) 2500
Aor13HI TCCGGA 1 cut(s) 1399
AoxI GGCC 6 cut(s) 56, 1151, 1909, 2195, 2447, 2533
ApeKI GCWGC 3 cut(s) 401, 2020, 2104
ApoI RAATTY 7 cut(s) 618, 731, 752, 869, 1497, 2441, 2521
ArsI GACNNNNNNTTYG 2 cut(s) 52, 84
AspLEI GCGC 3 cut(s) 41, 1065, 2476
AspS9I GGNCC 8 cut(s) 172, 710, 721, 788, 1211, 1355, 2196, 2447
AsuHPI GGTGA 3 cut(s) 427, 860, 1547
AvaI CYCGRG 1 cut(s) 2500
AvaII GGWCC 6 cut(s) 172, 710, 721, 788, 1211, 1355
BaeGI GKGCMC 1 cut(s) 631
BaeI ACNNNNGTAYC 4 cut(s) 757, 790, 1362, 1395
BalI TGGCCA 1 cut(s) 2535
BamHI GGATCC 1 cut(s) 1165
BanI GGYRCC 3 cut(s) 38, 626, 2473
BanII GRGCYC 1 cut(s) 1935
BauI CACGAG 1 cut(s) 2148
BbsI GAAGAC 6 cut(s) 60, 84, 293, 1542, 1641, 1791
Bbv12I GWGCWC 2 cut(s) 1051, 1935
BbvI GCAGC 3 cut(s) 388, 2032, 2091
BccI CCATC 7 cut(s) 296, 639, 693, 1184, 1292, 1304, 2275
BceAI ACGGC 4 cut(s) 26, 52, 194, 1896
BcgI CGANNNNNNTGC 4 cut(s) 416, 450, 524, 558
BciT130I CCWGG 1 cut(s) 1163
BciVI GTATCC 1 cut(s) 1393
BcoDI GTCTC 4 cut(s) 338, 656, 914, 2241
BfaI CTAG 9 cut(s) 464, 503, 716, 1058, 1448, 1469, 1797, 2070, 2514
BfoI RGCGCY 2 cut(s) 42, 2477
BfuAI ACCTGC 1 cut(s) 526
BfuI GTATCC 1 cut(s) 1393
BisI GCNGC 7 cut(s) 134, 147, 230, 402, 1444, 2021, 2105
BlsI GCNGC 7 cut(s) 135, 148, 231, 403, 1445, 2022, 2106
BmcAI AGTACT 1 cut(s) 128
Bme1390I CCNGG 1 cut(s) 1163
Bme18I GGWCC 6 cut(s) 172, 710, 721, 788, 1211, 1355
BmeT110I CYCGRG 1 cut(s) 2500
BmgBI CACGTC 2 cut(s) 187, 424
BmgT120I GGNCC 8 cut(s) 172, 710, 721, 788, 1211, 1355, 2196, 2447
BmiI GGNNCC 8 cut(s) 40, 628, 1167, 1212, 1518, 1728, 1777, 2475
BmrFI CCNGG 1 cut(s) 1163
BmrI ACTGGG 1 cut(s) 2475
BmsI GCATC 8 cut(s) 707, 819, 958, 1074, 1447, 1498, 1806, 2127
BmuI ACTGGG 1 cut(s) 2475
BpiI GAAGAC 6 cut(s) 60, 84, 293, 1542, 1641, 1791
BplI GAGNNNNNCTC 2 cut(s) 2224, 2256
BpmI CTGGAG 4 cut(s) 1462, 1713, 1736, 2256
Bpu10I CCTNAGC 3 cut(s) 27, 168, 1512
BpuEI CTTGAG 2 cut(s) 398, 551
BsaBI GATNNNNATC 1 cut(s) 312
BsaHI GRCGYC 2 cut(s) 39, 2474
BsaI GGTCTC 3 cut(s) 338, 656, 2241
BsaJI CCNNGG 1 cut(s) 988
BsaWI WCCGGW 1 cut(s) 1399
Bsc4I CCNNNNNNNGG 8 cut(s) 129, 839, 911, 1181, 1453, 1532, 2483, 2487
Bse3DI GCAATG 2 cut(s) 1398, 1935
Bse8I GATNNNNATC 1 cut(s) 312
BseAI TCCGGA 1 cut(s) 1399
BseBI CCWGG 1 cut(s) 1163
BseDI CCNNGG 1 cut(s) 988
BseGI GGATG 6 cut(s) 1065, 1315, 1462, 1821, 2005, 2419
BseJI GATNNNNATC 1 cut(s) 312
BseLI CCNNNNNNNGG 8 cut(s) 129, 839, 911, 1181, 1453, 1532, 2483, 2487
BseMI GCAATG 2 cut(s) 1398, 1935
BseRI GAGGAG 2 cut(s) 2147, 2229
BseSI GKGCMC 1 cut(s) 631
BseXI GCAGC 3 cut(s) 388, 2032, 2091
BseYI CCCAGC 2 cut(s) 1387, 2117
BsgI GTGCAG 3 cut(s) 446, 488, 2039
Bsh1285I CGRYCG 1 cut(s) 120
BshFI GGCC 6 cut(s) 58, 1153, 1911, 2197, 2449, 2535
BshNI GGYRCC 3 cut(s) 38, 626, 2473
BsiEI CGRYCG 1 cut(s) 120
BsiHKAI GWGCWC 2 cut(s) 1051, 1935
BsiHKCI CYCGRG 1 cut(s) 2500
BsiSI CCGG 1 cut(s) 1400
BslFI GGGAC 4 cut(s) 776, 1507, 2037, 2051
BslI CCNNNNNNNGG 8 cut(s) 129, 839, 911, 1181, 1453, 1532, 2483, 2487
BsmAI GTCTC 4 cut(s) 338, 656, 914, 2241
BsmFI GGGAC 4 cut(s) 776, 1507, 2037, 2051
BsmI GAATGC 3 cut(s) 1762, 2038, 2078
BsnI GGCC 6 cut(s) 58, 1153, 1911, 2197, 2449, 2535
Bso31I GGTCTC 3 cut(s) 338, 656, 2241
BsoBI CYCGRG 1 cut(s) 2500
Bsp1286I GDGCHC 3 cut(s) 631, 1051, 1935
Bsp13I TCCGGA 1 cut(s) 1399
BspACI CCGC 7 cut(s) 120, 133, 140, 146, 229, 719, 1444
BspANI GGCC 6 cut(s) 58, 1153, 1911, 2197, 2449, 2535
BspEI TCCGGA 1 cut(s) 1399
BspHI TCATGA 3 cut(s) 1294, 1486, 2302
BspLI GGNNCC 8 cut(s) 40, 628, 1167, 1212, 1518, 1728, 1777, 2475
BspMI ACCTGC 1 cut(s) 526
BspPI GGATC 6 cut(s) 280, 959, 1160, 1173, 1309, 1669
BspT107I GGYRCC 3 cut(s) 38, 626, 2473
BspTNI GGTCTC 3 cut(s) 338, 656, 2241
BsrBI CCGCTC 1 cut(s) 140
BsrDI GCAATG 2 cut(s) 1398, 1935
BssECI CCNNGG 1 cut(s) 988
BssNI GRCGYC 2 cut(s) 39, 2474
BssSI CACGAG 1 cut(s) 2148
BssT1I CCWWGG 1 cut(s) 988
Bst2BI CACGAG 1 cut(s) 2148
Bst2UI CCWGG 1 cut(s) 1163
Bst4CI ACNGT 8 cut(s) 87, 638, 1237, 1521, 1977, 2013, 2300, 2625
Bst6I CTCTTC 2 cut(s) 2334, 2604
BstACI GRCGYC 2 cut(s) 39, 2474
BstC8I GCNNGC 5 cut(s) 19, 23, 138, 207, 2489
BstF5I GGATG 6 cut(s) 1065, 1315, 1462, 1821, 2005, 2419
BstH2I RGCGCY 2 cut(s) 42, 2477
BstHHI GCGC 3 cut(s) 41, 1065, 2476
BstMAI GTCTC 4 cut(s) 338, 656, 914, 2241
BstMCI CGRYCG 1 cut(s) 120
BstMWI GCNNNNNNNGC 6 cut(s) 146, 249, 1275, 1917, 2373, 2455
BstNI CCWGG 1 cut(s) 1163
BstNSI RCATGY 1 cut(s) 2462
BstSCI CCNGG 1 cut(s) 1161
BstSLI GKGCMC 1 cut(s) 631
BstV1I GCAGC 3 cut(s) 388, 2032, 2091
BstV2I GAAGAC 6 cut(s) 60, 84, 293, 1542, 1641, 1791
BstX2I RGATCY 2 cut(s) 1165, 1301
BstYI RGATCY 2 cut(s) 1165, 1301
BsuI GTATCC 1 cut(s) 1393
BsuRI GGCC 6 cut(s) 58, 1153, 1911, 2197, 2449, 2535
BtrI CACGTC 2 cut(s) 187, 424
BtsCI GGATG 6 cut(s) 1065, 1315, 1462, 1821, 2005, 2419
BtsIMutI CAGTG 6 cut(s) 180, 282, 1608, 1876, 2488, 2533
BveI ACCTGC 1 cut(s) 526
Cac8I GCNNGC 5 cut(s) 19, 23, 138, 207, 2489
CciI TCATGA 3 cut(s) 1294, 1486, 2302
CfoI GCGC 3 cut(s) 41, 1065, 2476
Cfr13I GGNCC 8 cut(s) 172, 710, 721, 788, 1211, 1355, 2196, 2447
CseI GACGC 1 cut(s) 160
Csp6I GTAC 5 cut(s) 127, 350, 516, 1978, 2562
CviQI GTAC 5 cut(s) 127, 350, 516, 1978, 2562
DinI GGCGCC 2 cut(s) 40, 2475
DraI TTTAAA 1 cut(s) 571
EaeI YGGCCR 2 cut(s) 1909, 2533
Eam1104I CTCTTC 2 cut(s) 2334, 2604
EarI CTCTTC 2 cut(s) 2334, 2604
Ecl136II GAGCTC 1 cut(s) 1933
Eco130I CCWWGG 1 cut(s) 988
Eco24I GRGCYC 1 cut(s) 1935
Eco31I GGTCTC 3 cut(s) 338, 656, 2241
Eco32I GATATC 1 cut(s) 645
Eco47I GGWCC 6 cut(s) 172, 710, 721, 788, 1211, 1355
Eco53kI GAGCTC 1 cut(s) 1933
Eco57I CTGAAG 3 cut(s) 305, 730, 1803
Eco88I CYCGRG 1 cut(s) 2500
EcoICRI GAGCTC 1 cut(s) 1933
EcoRI GAATTC 1 cut(s) 618
EcoRII CCWGG 1 cut(s) 1161
EcoRV GATATC 1 cut(s) 645
EcoT14I CCWWGG 1 cut(s) 988
EcoT22I ATGCAT 2 cut(s) 700, 2038
EcoT38I GRGCYC 1 cut(s) 1935
EgeI GGCGCC 2 cut(s) 40, 2475
EheI GGCGCC 2 cut(s) 40, 2475
ErhI CCWWGG 1 cut(s) 988
FalI AAGNNNNNCTT 4 cut(s) 1018, 1050, 1978, 2010
FaqI GGGAC 4 cut(s) 776, 1507, 2037, 2051
FauNDI CATATG 3 cut(s) 652, 1042, 2088
FblI GTMKAC 2 cut(s) 1900, 2008
Fnu4HI GCNGC 7 cut(s) 134, 147, 230, 402, 1444, 2021, 2105
FokI GGATG 6 cut(s) 1052, 1322, 1469, 1828, 2012, 2406
FriOI GRGCYC 1 cut(s) 1935
Fsp4HI GCNGC 7 cut(s) 134, 147, 230, 402, 1444, 2021, 2105
FspBI CTAG 9 cut(s) 464, 503, 716, 1058, 1448, 1469, 1797, 2070, 2514
GlaI GCGC 3 cut(s) 40, 1064, 2475
GluI GCNGC 7 cut(s) 134, 147, 230, 402, 1444, 2021, 2105
GsaI CCCAGC 2 cut(s) 1391, 2121
GsuI CTGGAG 4 cut(s) 1462, 1713, 1736, 2256
HaeII RGCGCY 2 cut(s) 42, 2477
HaeIII GGCC 6 cut(s) 58, 1153, 1911, 2197, 2449, 2535
HapII CCGG 1 cut(s) 1400
HgaI GACGC 1 cut(s) 160
HhaI GCGC 3 cut(s) 41, 1065, 2476
Hin1I GRCGYC 2 cut(s) 39, 2474
Hin6I GCGC 3 cut(s) 39, 1063, 2474
HinP1I GCGC 3 cut(s) 39, 1063, 2474
HincII GTYRAC 1 cut(s) 2009
HindII GTYRAC 1 cut(s) 2009
HindIII AAGCTT 2 cut(s) 449, 1654
HinfI GANTC 7 cut(s) 433, 613, 1244, 1250, 1412, 1696, 2050
HpaII CCGG 1 cut(s) 1400
HphI GGTGA 3 cut(s) 427, 860, 1547
Hpy166II GTNNAC 5 cut(s) 1055, 1145, 1358, 1901, 2009
Hpy8I GTNNAC 5 cut(s) 1055, 1145, 1358, 1901, 2009
Hpy99I CGWCG 7 cut(s) 76, 79, 82, 91, 103, 154, 347
HpyAV CCTTC 5 cut(s) 195, 412, 502, 915, 1971
HpyCH4III ACNGT 8 cut(s) 87, 638, 1237, 1521, 1977, 2013, 2300, 2625
HpyCH4IV ACGT 7 cut(s) 186, 222, 290, 423, 518, 574, 1903
HpyF10VI GCNNNNNNNGC 6 cut(s) 146, 249, 1275, 1917, 2373, 2455
HpySE526I ACGT 7 cut(s) 186, 222, 290, 423, 518, 574, 1903
Hsp92I GRCGYC 2 cut(s) 39, 2474
HspAI GCGC 3 cut(s) 39, 1063, 2474
KasI GGCGCC 2 cut(s) 38, 2473
Kpn2I TCCGGA 1 cut(s) 1399
LmnI GCTCC 3 cut(s) 1717, 1732, 2381
Lsp1109I GCAGC 3 cut(s) 388, 2032, 2091
LweI GCATC 8 cut(s) 707, 819, 958, 1074, 1447, 1498, 1806, 2127
MaeI CTAG 9 cut(s) 464, 503, 716, 1058, 1448, 1469, 1797, 2070, 2514
MaeII ACGT 7 cut(s) 186, 222, 290, 423, 518, 574, 1903
MaeIII GTNAC 5 cut(s) 863, 1318, 1886, 2243, 2434
MbiI CCGCTC 1 cut(s) 140
MfeI CAATTG 1 cut(s) 1767
MflI RGATCY 2 cut(s) 1165, 1301
MhlI GDGCHC 3 cut(s) 631, 1051, 1935
MlsI TGGCCA 1 cut(s) 2535
MluNI TGGCCA 1 cut(s) 2535
Mly113I GGCGCC 2 cut(s) 39, 2474
MlyI GAGTC 2 cut(s) 622, 2059
MmeI TCCRAC 1 cut(s) 1714
Mox20I TGGCCA 1 cut(s) 2535
Mph1103I ATGCAT 2 cut(s) 700, 2038
MroI TCCGGA 1 cut(s) 1399
MscI TGGCCA 1 cut(s) 2535
MseI TTAA 6 cut(s) 447, 570, 591, 954, 1494, 1892
MslI CAYNNNNRTG 3 cut(s) 185, 1140, 2424
Msp20I TGGCCA 1 cut(s) 2535
MspA1I CMGCKG 2 cut(s) 229, 1667
MspI CCGG 1 cut(s) 1400
MspR9I CCNGG 1 cut(s) 1163
MunI CAATTG 1 cut(s) 1767
Mva1269I GAATGC 3 cut(s) 1762, 2038, 2078
MvaI CCWGG 1 cut(s) 1163
MwoI GCNNNNNNNGC 6 cut(s) 146, 249, 1275, 1917, 2373, 2455
NarI GGCGCC 2 cut(s) 39, 2474
NdeI CATATG 3 cut(s) 652, 1042, 2088
NlaIV GGNNCC 8 cut(s) 40, 628, 1167, 1212, 1518, 1728, 1777, 2475
NmeAIII GCCGAG 1 cut(s) 148
NmuCI GTSAC 1 cut(s) 1886
NsiI ATGCAT 2 cut(s) 700, 2038
NspI RCATGY 1 cut(s) 2462
OliI CACNNNNGTG 1 cut(s) 185
PagI TCATGA 3 cut(s) 1294, 1486, 2302
PcsI WCGNNNNNNNCGW 6 cut(s) 71, 83, 86, 95, 202, 1909
PctI GAATGC 3 cut(s) 1762, 2038, 2078
PfeI GAWTC 5 cut(s) 433, 1244, 1250, 1412, 1696
PflFI GACNNNGTC 1 cut(s) 64
PflMI CCANNNNNTGG 1 cut(s) 839
PfoI TCCNGGA 1 cut(s) 1161
PkrI GCNGC 7 cut(s) 135, 148, 231, 403, 1445, 2022, 2106
PleI GAGTC 2 cut(s) 621, 2058
PluTI GGCGCC 2 cut(s) 42, 2477
PpsI GAGTC 2 cut(s) 621, 2058
Psp124BI GAGCTC 1 cut(s) 1935
Psp6I CCWGG 1 cut(s) 1161
PspFI CCCAGC 2 cut(s) 1387, 2117
PspGI CCWGG 1 cut(s) 1161
PspN4I GGNNCC 8 cut(s) 40, 628, 1167, 1212, 1518, 1728, 1777, 2475
PspPI GGNCC 8 cut(s) 172, 710, 721, 788, 1211, 1355, 2196, 2447
PsrI GAACNNNNNNTAC 2 cut(s) 357, 389
PsuI RGATCY 2 cut(s) 1165, 1301
PsyI GACNNNGTC 1 cut(s) 64
PvuII CAGCTG 1 cut(s) 1667
RsaI GTAC 5 cut(s) 128, 351, 517, 1979, 2563
RsaNI GTAC 5 cut(s) 127, 350, 516, 1978, 2562
RseI CAYNNNNRTG 3 cut(s) 185, 1140, 2424
SacI GAGCTC 1 cut(s) 1935
SalI GTCGAC 1 cut(s) 2007
SaqAI TTAA 6 cut(s) 447, 570, 591, 954, 1494, 1892
SatI GCNGC 7 cut(s) 134, 147, 230, 402, 1444, 2021, 2105
Sau96I GGNCC 8 cut(s) 172, 710, 721, 788, 1211, 1355, 2196, 2447
ScaI AGTACT 1 cut(s) 128
SchI GAGTC 2 cut(s) 622, 2059
ScrFI CCNGG 1 cut(s) 1163
SduI GDGCHC 3 cut(s) 631, 1051, 1935
SfaNI GCATC 8 cut(s) 707, 819, 958, 1074, 1447, 1498, 1806, 2127
SfoI GGCGCC 2 cut(s) 40, 2475
SinI GGWCC 6 cut(s) 172, 710, 721, 788, 1211, 1355
SmiMI CAYNNNNRTG 3 cut(s) 185, 1140, 2424
SmlI CTYRAG 2 cut(s) 377, 530
SmoI CTYRAG 2 cut(s) 377, 530
SsiI CCGC 7 cut(s) 120, 133, 140, 146, 229, 719, 1444
SspDI GGCGCC 2 cut(s) 38, 2473
SspI AATATT 1 cut(s) 475
SspMI CTAG 9 cut(s) 464, 503, 716, 1058, 1448, 1469, 1797, 2070, 2514
SstI GAGCTC 1 cut(s) 1935
StyD4I CCNGG 1 cut(s) 1161
StyI CCWWGG 1 cut(s) 988
TaaI ACNGT 8 cut(s) 87, 638, 1237, 1521, 1977, 2013, 2300, 2625
TaiI ACGT 7 cut(s) 189, 225, 293, 426, 521, 577, 1906
TatI WGTACW 2 cut(s) 126, 2561
TauI GCSGC 4 cut(s) 136, 149, 232, 1446
TfiI GAWTC 5 cut(s) 433, 1244, 1250, 1412, 1696
Tru1I TTAA 6 cut(s) 447, 570, 591, 954, 1494, 1892
Tru9I TTAA 6 cut(s) 447, 570, 591, 954, 1494, 1892
TscAI CASTG 6 cut(s) 187, 282, 1608, 1876, 2488, 2533
TseFI GTSAC 1 cut(s) 1886
TseI GCWGC 3 cut(s) 401, 2020, 2104
Tsp45I GTSAC 1 cut(s) 1886
TspDTI ATGAA 9 cut(s) 1257, 1364, 1475, 1647, 1656, 1905, 2105, 2496, 2622
TspGWI ACGGA 1 cut(s) 211
TspRI CASTG 6 cut(s) 187, 282, 1608, 1876, 2488, 2533
Tth111I GACNNNGTC 1 cut(s) 64
Van91I CCANNNNNTGG 1 cut(s) 839
VpaK11BI GGWCC 6 cut(s) 172, 710, 721, 788, 1211, 1355
XapI RAATTY 7 cut(s) 618, 731, 752, 869, 1497, 2441, 2521
XceI RCATGY 1 cut(s) 2462
XmiI GTMKAC 2 cut(s) 1900, 2008
XspI CTAG 9 cut(s) 464, 503, 716, 1058, 1448, 1469, 1797, 2070, 2514
ZrmI AGTACT 1 cut(s) 128
Zsp2I ATGCAT 2 cut(s) 700, 2038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.