AT3G57530

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
21296457 .. 21299704
3248 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G57530.2

Sequence Viewer

Length: 1617 bp
ATGGGTAATTGTTGCGGAACAGCAGGATCATTGGCTCAAAACGATAACAAACCCAAAAAAGGAAGGAAGAAGCAAAACCCTTTCTCGATTGATTACGGTCTTCACCACGGTGGTGGAGATGGAGGTGGAAGACCTCTTAAGCTTATCGTTTTGAATGATCCAACAGGTCGTGAGATCGAGTCTAAATACACGTTGGGGAGAGAGCTAGGTCGTGGAGAATTCGGTGTTACGTATCTATGTACTGATAAGGAGACAGACGACGTTTTTGCTTGTAAATCGATTTTGAAGAAGAAGCTGAGGACAGCTGTTGATATTGAAGATGTTAGGAGAGAGGTTGAGATTATGAGGCATATGCCTGAGCATCCTAATGTTGTTACTTTGAAGGAGACTTATGAGGATGAGCATGCTGTTCATTTGGTTATGGAGCTTTGTGAAGGTGGTGAATTGTTTGATAGGATTGTTGCTAGAGGGCATTATACTGAGAGAGCTGCTGCTGCTGTCACTAAGACCATCATGGAAGTTGTTCAGGTGTGTCATAAGCATGGGGTAATGCACAGGGACCTGAAACCTGAGAACTTCTTGTTTGGAAACAAGAAGGAGACTGCACCTCTTAAGGCGATTGATTTTGGTCTCTCTGTTTTCTTTAAACCAGGCGAGAGGTTTAACGAAATCGTTGGTAGTCCGTACTACATGGCTCCCGAGGTGCTAAAACGGAATTATGGTCCAGAAGTTGATATTTGGAGTGCAGGTGTAATTCTTTACATACTGCTATGTGGTGTCCCGCCTTTCTGGGCAGAAACTGAACAAGGAGTTGCACAAGCAATTATTCGATCTGTACTAGACTTCAGAAGGGACCCATGGCCCAAGGTTTCTGAAAACGCAAAAGACCTTATCAGGAAAATGCTTGATCCTGACCAAAAGCGTCGTCTTACAGCTCAACAAGTCCTAGATCACCCGTGGTTACAGAATGCAAAGACAGCCCCCAATGTATCATTGGGTGAAACAGTGAGGGCAAGGTTGAAGCAGTTCACCGTCATGAACAAGCTCAAGAAACGAGCACTCAGGGTTATTGCTGAGCATTTATCAGATGAAGAAGCTTCAGGTATAAGAGAAGGGTTCCAAATAATGGACACAAGCCAAAGAGGGAAGATTAACATCGACGAGCTTAAAATCGGGTTGCAGAAACTTGGTCATGCCATTCCGCAAGATGATTTACAAATTTTGATGGATGCTGGAGACATCGATAGAGATGGATATTTGGACTGTGACGAGTTTATTGCCATATCGGTACACCTAAGGAAAATGGGCAATGACGAGCATCTCAAGAAAGCGTTTGCGTTCTTTGATCAAAACAATAACGGATATATCGAAATAGAGGAGTTAAGGGAAGCCTTGTCTGACGAACTTGGTACAAGTGAAGAAGTTGTTGATGCCATTATCCGTGATGTTGACACCGACAAGGATGGAAGAATAAGTTACGAAGAGTTTGTAACGATGATGAAAACAGGAACAGATTGGAGAAAAGCTTCGAGACAGTACTCGAGAGAACGGTTTAACAGTATCAGTCTCAAACTGATGCAAGATGCGTCGTTGCAGGTCAATGGTGATACAAGATGA

Protein Analysis

538

Amino Acids

60.93

Weight (kDa)

5.99

Isoelectric Point (pI)

36.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 63 - 321 8.1e-80 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 64 - 316 1.6e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 737
Acc36I ACCTGC 2 cut(s) 737, 1585
AccB7I CCANNNNNTGG 1 cut(s) 1126
AciI CCGC 3 cut(s) 15, 782, 1202
AclWI GGATC 3 cut(s) 34, 152, 902
AcsI RAATTY 2 cut(s) 218, 1218
AcuI CTGAAG 2 cut(s) 829, 1083
AfaI GTAC 6 cut(s) 241, 686, 837, 1290, 1411, 1538
AfiI CCNNNNNNNGG 2 cut(s) 59, 1126
AflII CTTAAG 2 cut(s) 137, 611
AflIII ACRYGT 1 cut(s) 189
AgsI TTSAA 5 cut(s) 154, 286, 317, 382, 1021
AjnI CCWGG 1 cut(s) 649
AleI CACNNNNGTG 2 cut(s) 108, 111
Alw21I GWGCWC 1 cut(s) 1060
Alw26I GTCTC 7 cut(s) 245, 380, 593, 635, 1230, 1525, 1571
AlwI GGATC 3 cut(s) 34, 152, 902
AlwNI CAGNNNCTG 1 cut(s) 800
Ama87I CYCGRG 2 cut(s) 698, 1540
AoxI GGCC 1 cut(s) 860
ApeKI GCWGC 3 cut(s) 488, 491, 494
ApoI RAATTY 2 cut(s) 218, 1218
ArsI GACNNNNNNTTYG 4 cut(s) 248, 280, 910, 942
Asp700I GAANNNNTTC 3 cut(s) 522, 1025, 1525
AspS9I GGNCC 4 cut(s) 559, 722, 853, 861
AsuHPI GGTGA 6 cut(s) 95, 452, 944, 1010, 1021, 1616
AvaI CYCGRG 2 cut(s) 698, 1540
AvaII GGWCC 3 cut(s) 559, 722, 853
AxyI CCTNAGG 1 cut(s) 1295
BbsI GAAGAC 2 cut(s) 92, 136
Bbv12I GWGCWC 1 cut(s) 1060
BbvCI CCTCAGC 1 cut(s) 296
BbvI GCAGC 3 cut(s) 475, 478, 481
BccI CCATC 5 cut(s) 113, 518, 1219, 1244, 1457
BcgI CGANNNNNNTGC 4 cut(s) 248, 282, 1259, 1293
BciT130I CCWGG 1 cut(s) 651
BclI TGATCA 1 cut(s) 1345
BcoDI GTCTC 7 cut(s) 245, 380, 593, 635, 1230, 1525, 1571
BfaI CTAG 4 cut(s) 206, 465, 839, 947
BfrI CTTAAG 2 cut(s) 137, 611
BfuAI ACCTGC 2 cut(s) 737, 1585
BisI GCNGC 3 cut(s) 489, 492, 495
BlpI GCTNAGC 1 cut(s) 1074
BlsI GCNGC 3 cut(s) 490, 493, 496
BmcAI AGTACT 1 cut(s) 1538
Bme1390I CCNGG 1 cut(s) 651
Bme18I GGWCC 3 cut(s) 559, 722, 853
BmeT110I CYCGRG 2 cut(s) 698, 1540
BmgT120I GGNCC 4 cut(s) 559, 722, 853, 861
BmiI GGNNCC 5 cut(s) 560, 696, 854, 855, 1118
BmrFI CCNGG 1 cut(s) 651
BmsI GCATC 6 cut(s) 370, 1219, 1327, 1420, 1566, 1573
BpiI GAAGAC 2 cut(s) 92, 136
BpmI CTGGAG 1 cut(s) 1254
Bpu10I CCTNAGC 2 cut(s) 296, 357
Bpu1102I GCTNAGC 1 cut(s) 1074
BpuEI CTTGAG 2 cut(s) 1031, 1307
Bsa29I ATCGAT 2 cut(s) 278, 1242
BsaAI YACGTR 1 cut(s) 231
BsaBI GATNNNNATC 1 cut(s) 1154
BsaI GGTCTC 1 cut(s) 635
BsaJI CCNNGG 5 cut(s) 106, 699, 857, 864, 956
BsaXI ACNNNNNCTCC 2 cut(s) 733, 763
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 1126
Bse21I CCTNAGG 1 cut(s) 1295
Bse3DI GCAATG 1 cut(s) 1315
Bse8I GATNNNNATC 1 cut(s) 1154
BseBI CCWGG 1 cut(s) 651
BseCI ATCGAT 2 cut(s) 278, 1242
BseDI CCNNGG 5 cut(s) 106, 699, 857, 864, 956
BseGI GGATG 4 cut(s) 361, 403, 1234, 1468
BseJI GATNNNNATC 1 cut(s) 1154
BseLI CCNNNNNNNGG 2 cut(s) 59, 1126
BseMI GCAATG 1 cut(s) 1315
BseMII CTCAG 6 cut(s) 287, 348, 471, 561, 1065, 1075
BseRI GAGGAG 1 cut(s) 1391
BseXI GCAGC 3 cut(s) 475, 478, 481
BsgI GTGCAG 2 cut(s) 588, 765
BshFI GGCC 1 cut(s) 862
BshVI ATCGAT 2 cut(s) 278, 1242
BsiHKAI GWGCWC 1 cut(s) 1060
BsiHKCI CYCGRG 2 cut(s) 698, 1540
BslFI GGGAC 3 cut(s) 572, 764, 866
BslI CCNNNNNNNGG 2 cut(s) 59, 1126
BsmAI GTCTC 7 cut(s) 245, 380, 593, 635, 1230, 1525, 1571
BsmFI GGGAC 3 cut(s) 572, 764, 866
BsmI GAATGC 1 cut(s) 973
BsnI GGCC 1 cut(s) 862
Bso31I GGTCTC 1 cut(s) 635
BsoBI CYCGRG 2 cut(s) 698, 1540
Bsp1286I GDGCHC 1 cut(s) 1060
Bsp143I GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
Bsp1720I GCTNAGC 1 cut(s) 1074
Bsp19I CCATGG 1 cut(s) 857
BspACI CCGC 3 cut(s) 15, 782, 1202
BspANI GGCC 1 cut(s) 862
BspCNI CTCAG 6 cut(s) 288, 349, 472, 562, 1066, 1074
BspDI ATCGAT 2 cut(s) 278, 1242
BspHI TCATGA 1 cut(s) 1035
BspLI GGNNCC 5 cut(s) 560, 696, 854, 855, 1118
BspMI ACCTGC 2 cut(s) 737, 1585
BspPI GGATC 3 cut(s) 34, 152, 902
BspTI CTTAAG 2 cut(s) 137, 611
BspTNI GGTCTC 1 cut(s) 635
BsrDI GCAATG 1 cut(s) 1315
BssECI CCNNGG 5 cut(s) 106, 699, 857, 864, 956
BssMI GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
BssT1I CCWWGG 2 cut(s) 857, 864
Bst2UI CCWGG 1 cut(s) 651
Bst4CI ACNGT 8 cut(s) 98, 110, 1006, 1033, 1265, 1536, 1551, 1559
Bst6I CTCTTC 1 cut(s) 1476
BstAFI CTTAAG 2 cut(s) 137, 611
BstBAI YACGTR 1 cut(s) 231
BstC8I GCNNGC 1 cut(s) 405
BstDEI CTNAG 8 cut(s) 296, 357, 480, 504, 570, 1061, 1074, 1295
BstDSI CCRYGG 3 cut(s) 106, 857, 956
BstF5I GGATG 4 cut(s) 361, 403, 1234, 1468
BstKTI GATC 7 cut(s) 29, 160, 177, 833, 910, 952, 1348
BstMAI GTCTC 7 cut(s) 245, 380, 593, 635, 1230, 1525, 1571
BstMBI GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
BstMWI GCNNNNNNNGC 2 cut(s) 494, 977
BstNI CCWGG 1 cut(s) 651
BstNSI RCATGY 1 cut(s) 407
BstSCI CCNGG 1 cut(s) 649
BstSNI TACGTA 1 cut(s) 231
BstV1I GCAGC 3 cut(s) 475, 478, 481
BstV2I GAAGAC 2 cut(s) 92, 136
BstXI CCANNNNNNTGG 1 cut(s) 113
Bsu15I ATCGAT 2 cut(s) 278, 1242
Bsu36I CCTNAGG 1 cut(s) 1295
BsuRI GGCC 1 cut(s) 862
BsuTUI ATCGAT 2 cut(s) 278, 1242
BtgI CCRYGG 3 cut(s) 106, 857, 956
BtsCI GGATG 4 cut(s) 361, 403, 1234, 1468
BtsIMutI CAGTG 1 cut(s) 1011
BveI ACCTGC 2 cut(s) 737, 1585
Cac8I GCNNGC 1 cut(s) 405
CaiI CAGNNNCTG 1 cut(s) 800
CciI TCATGA 1 cut(s) 1035
Cfr13I GGNCC 4 cut(s) 559, 722, 853, 861
ClaI ATCGAT 2 cut(s) 278, 1242
CseI GACGC 2 cut(s) 911, 1575
Csp6I GTAC 6 cut(s) 240, 685, 836, 1289, 1410, 1537
CviAII CATG 7 cut(s) 404, 514, 542, 691, 858, 1036, 1193
CviQI GTAC 6 cut(s) 240, 685, 836, 1289, 1410, 1537
DdeI CTNAG 8 cut(s) 296, 357, 480, 504, 570, 1061, 1074, 1295
DpnI GATC 7 cut(s) 28, 159, 176, 832, 909, 951, 1347
DpnII GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
DraI TTTAAA 1 cut(s) 646
Eam1104I CTCTTC 1 cut(s) 1476
EarI CTCTTC 1 cut(s) 1476
Eco105I TACGTA 1 cut(s) 231
Eco130I CCWWGG 2 cut(s) 857, 864
Eco31I GGTCTC 1 cut(s) 635
Eco47I GGWCC 3 cut(s) 559, 722, 853
Eco57I CTGAAG 2 cut(s) 829, 1083
Eco81I CCTNAGG 1 cut(s) 1295
Eco88I CYCGRG 2 cut(s) 698, 1540
EcoO109I RGGNCCY 2 cut(s) 559, 853
EcoRI GAATTC 1 cut(s) 218
EcoRII CCWGG 1 cut(s) 649
EcoT14I CCWWGG 2 cut(s) 857, 864
ErhI CCWWGG 2 cut(s) 857, 864
FaeI CATG 7 cut(s) 407, 517, 545, 694, 861, 1039, 1196
FaqI GGGAC 3 cut(s) 572, 764, 866
FatI CATG 7 cut(s) 403, 513, 541, 690, 857, 1035, 1192
FauI CCCGC 1 cut(s) 789
FauNDI CATATG 1 cut(s) 351
FbaI TGATCA 1 cut(s) 1345
Fnu4HI GCNGC 3 cut(s) 489, 492, 495
FokI GGATG 4 cut(s) 348, 410, 1241, 1475
Fsp4HI GCNGC 3 cut(s) 489, 492, 495
FspBI CTAG 4 cut(s) 206, 465, 839, 947
GluI GCNGC 3 cut(s) 489, 492, 495
GsuI CTGGAG 1 cut(s) 1254
HaeIII GGCC 1 cut(s) 862
HgaI GACGC 2 cut(s) 911, 1575
Hin1II CATG 7 cut(s) 407, 517, 545, 694, 861, 1039, 1196
HincII GTYRAC 1 cut(s) 1450
HindII GTYRAC 1 cut(s) 1450
HindIII AAGCTT 3 cut(s) 140, 1095, 1524
HinfI GANTC 1 cut(s) 179
HphI GGTGA 6 cut(s) 95, 452, 944, 1010, 1021, 1616
Hpy166II GTNNAC 3 cut(s) 1029, 1291, 1450
Hpy188I TCNGA 4 cut(s) 848, 874, 1087, 1399
Hpy8I GTNNAC 3 cut(s) 1029, 1291, 1450
Hpy99I CGWCG 4 cut(s) 263, 927, 1163, 1591
HpyAV CCTTC 6 cut(s) 57, 376, 428, 589, 843, 1106
HpyCH4III ACNGT 8 cut(s) 98, 110, 1006, 1033, 1265, 1536, 1551, 1559
HpyCH4IV ACGT 3 cut(s) 191, 230, 261
HpyCH4V TGCA 8 cut(s) 553, 605, 746, 815, 971, 1180, 1579, 1594
HpyF10VI GCNNNNNNNGC 2 cut(s) 494, 977
HpyF3I CTNAG 8 cut(s) 296, 357, 480, 504, 570, 1061, 1074, 1295
HpySE526I ACGT 3 cut(s) 191, 230, 261
Hsp92II CATG 7 cut(s) 407, 517, 545, 694, 861, 1039, 1196
KflI GGGWCCC 1 cut(s) 853
Ksp22I TGATCA 1 cut(s) 1345
Kzo9I GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
LmnI GCTCC 2 cut(s) 424, 700
Lsp1109I GCAGC 3 cut(s) 475, 478, 481
LweI GCATC 6 cut(s) 370, 1219, 1327, 1420, 1566, 1573
MaeI CTAG 4 cut(s) 206, 465, 839, 947
MaeII ACGT 3 cut(s) 191, 230, 261
MaeIII GTNAC 7 cut(s) 226, 373, 499, 960, 1265, 1475, 1489
MalI GATC 7 cut(s) 28, 159, 176, 832, 909, 951, 1347
MboI GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
MhlI GDGCHC 1 cut(s) 1060
MluCI AATT 7 cut(s) 7, 218, 443, 715, 753, 822, 1218
MlyI GAGTC 1 cut(s) 188
MmeI TCCRAC 1 cut(s) 185
MroXI GAANNNNTTC 3 cut(s) 522, 1025, 1525
MseI TTAA 8 cut(s) 138, 612, 645, 663, 1152, 1167, 1382, 1554
MslI CAYNNNNRTG 5 cut(s) 108, 111, 366, 540, 1034
MspA1I CMGCKG 1 cut(s) 305
MspCI CTTAAG 2 cut(s) 137, 611
MspR9I CCNGG 1 cut(s) 651
Mva1269I GAATGC 1 cut(s) 973
MvaI CCWGG 1 cut(s) 651
MwoI GCNNNNNNNGC 2 cut(s) 494, 977
NcoI CCATGG 1 cut(s) 857
NdeI CATATG 1 cut(s) 351
NdeII GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
NlaIII CATG 7 cut(s) 407, 517, 545, 694, 861, 1039, 1196
NlaIV GGNNCC 5 cut(s) 560, 696, 854, 855, 1118
NmuCI GTSAC 2 cut(s) 499, 1265
NspI RCATGY 1 cut(s) 407
OliI CACNNNNGTG 2 cut(s) 108, 111
PaeI GCATGC 1 cut(s) 407
PaeR7I CTCGAG 1 cut(s) 1540
PagI TCATGA 1 cut(s) 1035
PaqCI CACCTGC 1 cut(s) 737
PcsI WCGNNNNNNNCGW 1 cut(s) 1365
PctI GAATGC 1 cut(s) 973
PdmI GAANNNNTTC 3 cut(s) 522, 1025, 1525
PflMI CCANNNNNTGG 1 cut(s) 1126
PkrI GCNGC 3 cut(s) 490, 493, 496
PleI GAGTC 1 cut(s) 187
PpsI GAGTC 1 cut(s) 187
Ppu21I YACGTR 1 cut(s) 231
PpuMI RGGWCCY 2 cut(s) 559, 853
Psp5II RGGWCCY 2 cut(s) 559, 853
Psp6I CCWGG 1 cut(s) 649
PspGI CCWGG 1 cut(s) 649
PspN4I GGNNCC 5 cut(s) 560, 696, 854, 855, 1118
PspPI GGNCC 4 cut(s) 559, 722, 853, 861
PspPPI RGGWCCY 2 cut(s) 559, 853
PstNI CAGNNNCTG 1 cut(s) 800
PvuII CAGCTG 1 cut(s) 305
RsaI GTAC 6 cut(s) 241, 686, 837, 1290, 1411, 1538
RsaNI GTAC 6 cut(s) 240, 685, 836, 1289, 1410, 1537
RseI CAYNNNNRTG 5 cut(s) 108, 111, 366, 540, 1034
SaqAI TTAA 8 cut(s) 138, 612, 645, 663, 1152, 1167, 1382, 1554
SatI GCNGC 3 cut(s) 489, 492, 495
Sau3AI GATC 7 cut(s) 26, 157, 174, 830, 907, 949, 1345
Sau96I GGNCC 4 cut(s) 559, 722, 853, 861
ScaI AGTACT 1 cut(s) 1538
SchI GAGTC 1 cut(s) 188
ScrFI CCNGG 1 cut(s) 651
SduI GDGCHC 1 cut(s) 1060
SfaNI GCATC 6 cut(s) 370, 1219, 1327, 1420, 1566, 1573
Sfr274I CTCGAG 1 cut(s) 1540
SinI GGWCC 3 cut(s) 559, 722, 853
SlaI CTCGAG 1 cut(s) 1540
SmiMI CAYNNNNRTG 5 cut(s) 108, 111, 366, 540, 1034
SmlI CTYRAG 5 cut(s) 137, 611, 1046, 1322, 1540
SmoI CTYRAG 5 cut(s) 137, 611, 1046, 1322, 1540
SnaBI TACGTA 1 cut(s) 231
SphI GCATGC 1 cut(s) 407
Sse9I AATT 7 cut(s) 7, 218, 443, 715, 753, 822, 1218
SsiI CCGC 3 cut(s) 15, 782, 1202
SspMI CTAG 4 cut(s) 206, 465, 839, 947
StyD4I CCNGG 1 cut(s) 649
StyI CCWWGG 2 cut(s) 857, 864
TaaI ACNGT 8 cut(s) 98, 110, 1006, 1033, 1265, 1536, 1551, 1559
TaiI ACGT 3 cut(s) 194, 233, 264
TaqI TCGA 9 cut(s) 86, 177, 278, 829, 1158, 1242, 1368, 1529, 1541
TasI AATT 7 cut(s) 7, 218, 443, 715, 753, 822, 1218
TatI WGTACW 3 cut(s) 239, 835, 1536
Tru1I TTAA 8 cut(s) 138, 612, 645, 663, 1152, 1167, 1382, 1554
Tru9I TTAA 8 cut(s) 138, 612, 645, 663, 1152, 1167, 1382, 1554
TscAI CASTG 1 cut(s) 1011
TseFI GTSAC 2 cut(s) 499, 1265
TseI GCWGC 3 cut(s) 488, 491, 494
Tsp45I GTSAC 2 cut(s) 499, 1265
TspDTI ATGAA 4 cut(s) 401, 1052, 1104, 1514
TspGWI ACGGA 4 cut(s) 672, 727, 1374, 1430
TspRI CASTG 1 cut(s) 1011
Van91I CCANNNNNTGG 1 cut(s) 1126
Vha464I CTTAAG 2 cut(s) 137, 611
VpaK11BI GGWCC 3 cut(s) 559, 722, 853
XapI RAATTY 2 cut(s) 218, 1218
XceI RCATGY 1 cut(s) 407
XcmI CCANNNNNNNNNTGG 1 cut(s) 991
XhoI CTCGAG 1 cut(s) 1540
XmnI GAANNNNTTC 3 cut(s) 522, 1025, 1525
XspI CTAG 4 cut(s) 206, 465, 839, 947
ZrmI AGTACT 1 cut(s) 1538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.