Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004737

Physical Location & Seq

Genomic Coordinates Reverse (-)

23217233 .. 23218312

Gene Structure 1080 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G62760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 660 bp

ATGGCGATGAAGCTATATGGAGATGAGATGTCAGCGTGCGTGGCACGTGTTCTTCTCTGCCTTCATGAGAAGAACACTGAGTTCGAGCTTGTCCCTGTCAATCTCTTTGCTTGCCACCACAAGCTCCCTTCTTTTCTCTCCATGAACCCCTTTGGCAAAGTTCCAGCTCTACAAGATGACGATCTTACCCTTTTTGAGTCGAGGGCAATCACTGCATATATAGCAGAGAAGCATAGAGACAAAGGAACGGATTTGACAAGACACGAAGACCCTAAAGAAGCAGCGATTGTGAAGTTATGGTCGGAAGTGGAGGCTCACCACTTCAACCCTGCGATCTCCGCCGTCATCCACCAGCTCATCGTCGTGCCGCTTCAAGGTGAGTCTCCTAATGCAGCCATCGTGGAGGAGAATCTGGAGAATCTAGGGAAAATACTTGACGTGTACGAAGAGAGACTTGGGAAGACAAAATACTTAGCCGGAGATACTTACACACTCGCCGATCTCCACCACGTGCCTTACACTTACTACTTCATGAAGACGATTCATGCCGGTTTGATCAACGACCGTCCTAATGTCAAGGCGTGGTGGGAAGATCTCTGTTCTCGTCCGGCTTTCCTTAAAGTCTCTCCAGGCTTGACCGTTGCTCCCACCACAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009635 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0032991 GO:0034641 GO:0042221 GO:0042802 GO:0042803 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0046983 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

219

Amino Acids

24.65

Weight (kDa)

5.74

Isoelectric Point (pI)

42.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N	PF02798	1 - 76	2.5e-19	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	5 - 80	2.3e-14	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	11 - 76	1.8e-14	Glutathione S-transferase, N-terminal domain
GST_C	PF00043	114 - 203	4.7e-17	Glutathione S-transferase, C-terminal domain
GST_C_2	PF13410	132 - 195	1.9e-06	Glutathione S-transferase, C-terminal domain
GST_C_3	PF14497	138 - 204	2.2e-06	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0004737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62760
fragaria_vesca	FvH4_2g25180 FvH4_2g25180 FvH4_5g24660
malus_domestica	MD03G1283000.v1.1 MD06G1012200.v1.1 MD11G1303600.v1.1
prunus_persica	Prupe.5G014900_v2.0.a1 Prupe.8G256600_v2.0.a1 Prupe.8G260300_v2.0.a1
pyrus_communis	pycom06g01020
rosa_chinensis	RchiOBHm_Chr6g0293301 RchiOBHm_Chr7g0215041
rosa_laevigata	RLG00000002697 RLG00000011960
rosa_multiflora	Rmu_ssc0000134.1_g000067 Rmu_ssc0000162.1_g000037
rosa_roxburghii	Rroxscaffold_3G00244640 Rroxscaffold_7G00174270
rosa_rugosa	Rorug06G0234400 Rorug07G0149700
rosa_samantha	Rh6AG347200 Rh6BG354500 Rh6CG361000 Rh6DG347600 Rh7AG286700 Rh7BG278200 Rh7CG306100 Rh7DG290200
rosa_wichuraiana	Rw6G030220 Rw7G024450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	339, 368
AcvI	CACGTG	2 cut(s)	47, 511
AdeI	CACNNNGTG	1 cut(s)	511
AfaI	GTAC	1 cut(s)	443
AfiI	CCNNNNNNNGG	1 cut(s)	374
AflIII	ACRYGT	2 cut(s)	46, 438
AgsI	TTSAA	2 cut(s)	325, 374
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	1 cut(s)	628
AjuI	GAANNNNNNNTTGG	2 cut(s)	438, 470
AluBI	AGCT	5 cut(s)	13, 88, 124, 167, 355
AluI	AGCT	5 cut(s)	13, 88, 124, 167, 355
Alw26I	GTCTC	4 cut(s)	231, 387, 445, 628
ApeKI	GCWGC	2 cut(s)	281, 392
AsuHPI	GGTGA	2 cut(s)	308, 389
BarI	GAAGNNNNNNTAC	2 cut(s)	452, 484
BbrPI	CACGTG	2 cut(s)	47, 511
BbsI	GAAGAC	3 cut(s)	273, 467, 542
BbvI	GCAGC	2 cut(s)	293, 404
BccI	CCATC	1 cut(s)	404
BceAI	ACGGC	1 cut(s)	326
BciT130I	CCWGG	1 cut(s)	630
BclI	TGATCA	1 cut(s)	555
BcoDI	GTCTC	4 cut(s)	231, 387, 445, 628
BfaI	CTAG	1 cut(s)	422
BglII	AGATCT	1 cut(s)	592
BisI	GCNGC	3 cut(s)	282, 368, 393
BlsI	GCNGC	3 cut(s)	283, 369, 394
Bme1390I	CCNGG	1 cut(s)	630
BmgBI	CACGTC	1 cut(s)	439
BmrFI	CCNGG	1 cut(s)	630
BpiI	GAAGAC	3 cut(s)	273, 467, 542
BpmI	CTGGAG	2 cut(s)	434, 612
BsaAI	YACGTR	2 cut(s)	47, 511
BsaBI	GATNNNNATC	1 cut(s)	180
BsaXI	ACNNNNNCTCC	2 cut(s)	628, 658
Bsc4I	CCNNNNNNNGG	1 cut(s)	374
Bse118I	RCCGGY	1 cut(s)	548
Bse8I	GATNNNNATC	1 cut(s)	180
BseBI	CCWGG	1 cut(s)	630
BseGI	GGATG	1 cut(s)	345
BseJI	GATNNNNATC	1 cut(s)	180
BseLI	CCNNNNNNNGG	1 cut(s)	374
BseMII	CTCAG	1 cut(s)	69
BseRI	GAGGAG	1 cut(s)	419
BseXI	GCAGC	2 cut(s)	293, 404
Bsh1285I	CGRYCG	1 cut(s)	565
BsiEI	CGRYCG	1 cut(s)	565
BsiSI	CCGG	3 cut(s)	477, 549, 608
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	1 cut(s)	374
BsmAI	GTCTC	4 cut(s)	231, 387, 445, 628
BsmFI	GGGAC	1 cut(s)	77
Bsp143I	GATC	5 cut(s)	181, 333, 499, 555, 592
BspACI	CCGC	2 cut(s)	339, 368
BspCNI	CTCAG	1 cut(s)	70
BspHI	TCATGA	2 cut(s)	64, 531
BsrFI	RCCGGY	1 cut(s)	548
BssAI	RCCGGY	1 cut(s)	548
BssMI	GATC	5 cut(s)	181, 333, 499, 555, 592
Bst2UI	CCWGG	1 cut(s)	630
Bst4CI	ACNGT	2 cut(s)	566, 640
Bst6I	CTCTTC	1 cut(s)	441
BstAPI	GCANNNNNTGC	1 cut(s)	212
BstBAI	YACGTR	2 cut(s)	47, 511
BstC8I	GCNNGC	2 cut(s)	37, 112
BstDEI	CTNAG	2 cut(s)	78, 472
BstF5I	GGATG	1 cut(s)	345
BstKTI	GATC	5 cut(s)	184, 336, 502, 558, 595
BstMAI	GTCTC	4 cut(s)	231, 387, 445, 628
BstMBI	GATC	5 cut(s)	181, 333, 499, 555, 592
BstMCI	CGRYCG	1 cut(s)	565
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 212, 221, 338
BstNI	CCWGG	1 cut(s)	630
BstSCI	CCNGG	1 cut(s)	628
BstV1I	GCAGC	2 cut(s)	293, 404
BstV2I	GAAGAC	3 cut(s)	273, 467, 542
BstX2I	RGATCY	1 cut(s)	592
BstYI	RGATCY	1 cut(s)	592
BtgZI	GCGATG	1 cut(s)	20
BtrI	CACGTC	1 cut(s)	439
BtsCI	GGATG	1 cut(s)	345
BtsI	GCAGTG	1 cut(s)	210
BtsIMutI	CAGTG	2 cut(s)	75, 210
Cac8I	GCNNGC	2 cut(s)	37, 112
CciI	TCATGA	2 cut(s)	64, 531
Cfr10I	RCCGGY	1 cut(s)	548
Csp6I	GTAC	1 cut(s)	442
CviAII	CATG	4 cut(s)	65, 142, 532, 545
CviQI	GTAC	1 cut(s)	442
DdeI	CTNAG	2 cut(s)	78, 472
DpnI	GATC	5 cut(s)	183, 335, 501, 557, 594
DpnII	GATC	5 cut(s)	181, 333, 499, 555, 592
DraIII	CACNNNGTG	1 cut(s)	511
Eam1104I	CTCTTC	1 cut(s)	441
EarI	CTCTTC	1 cut(s)	441
EciI	GGCGGA	1 cut(s)	328
Eco72I	CACGTG	2 cut(s)	47, 511
EcoRII	CCWGG	1 cut(s)	628
FaeI	CATG	4 cut(s)	68, 145, 535, 548
FalI	AAGNNNNNCTT	2 cut(s)	438, 470
FaqI	GGGAC	1 cut(s)	77
FatI	CATG	4 cut(s)	64, 141, 531, 544
FbaI	TGATCA	1 cut(s)	555
Fnu4HI	GCNGC	3 cut(s)	282, 368, 393
FokI	GGATG	1 cut(s)	332
Fsp4HI	GCNGC	3 cut(s)	282, 368, 393
FspBI	CTAG	1 cut(s)	422
GluI	GCNGC	3 cut(s)	282, 368, 393
GsuI	CTGGAG	2 cut(s)	434, 612
HapII	CCGG	3 cut(s)	477, 549, 608
Hin1II	CATG	4 cut(s)	68, 145, 535, 548
HinfI	GANTC	5 cut(s)	197, 380, 409, 418, 541
HpaII	CCGG	3 cut(s)	477, 549, 608
HphI	GGTGA	2 cut(s)	308, 389
Hpy166II	GTNNAC	1 cut(s)	442
Hpy188I	TCNGA	1 cut(s)	304
Hpy188III	TCNNGA	3 cut(s)	65, 413, 532
Hpy8I	GTNNAC	1 cut(s)	442
Hpy99I	CGWCG	1 cut(s)	365
HpyAV	CCTTC	2 cut(s)	71, 138
HpyCH4III	ACNGT	2 cut(s)	566, 640
HpyCH4IV	ACGT	3 cut(s)	46, 438, 510
HpyCH4V	TGCA	2 cut(s)	215, 392
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 212, 221, 338
HpyF3I	CTNAG	2 cut(s)	78, 472
HpySE526I	ACGT	3 cut(s)	46, 438, 510
Hsp92II	CATG	4 cut(s)	68, 145, 535, 548
Ksp22I	TGATCA	1 cut(s)	555
Kzo9I	GATC	5 cut(s)	181, 333, 499, 555, 592
LmnI	GCTCC	2 cut(s)	129, 649
Lsp1109I	GCAGC	2 cut(s)	293, 404
MaeI	CTAG	1 cut(s)	422
MaeII	ACGT	3 cut(s)	46, 438, 510
MalI	GATC	5 cut(s)	183, 335, 501, 557, 594
MboI	GATC	5 cut(s)	181, 333, 499, 555, 592
MboII	GAAGA	7 cut(s)	44, 82, 278, 458, 472, 547, 602
MflI	RGATCY	1 cut(s)	592
MluCI	AATT	1 cut(s)	655
MlyI	GAGTC	2 cut(s)	206, 389
MmeI	TCCRAC	1 cut(s)	282
MnlI	CCTC	3 cut(s)	195, 304, 397
MseI	TTAA	1 cut(s)	618
MslI	CAYNNNNRTG	1 cut(s)	362
MspI	CCGG	3 cut(s)	477, 549, 608
MspR9I	CCNGG	1 cut(s)	630
MvaI	CCWGG	1 cut(s)	630
MwoI	GCNNNNNNNGC	4 cut(s)	41, 212, 221, 338
NdeII	GATC	5 cut(s)	181, 333, 499, 555, 592
NlaIII	CATG	4 cut(s)	68, 145, 535, 548
PagI	TCATGA	2 cut(s)	64, 531
PfeI	GAWTC	3 cut(s)	409, 418, 541
PkrI	GCNGC	3 cut(s)	283, 369, 394
PleI	GAGTC	2 cut(s)	205, 388
PmaCI	CACGTG	2 cut(s)	47, 511
PmlI	CACGTG	2 cut(s)	47, 511
PpsI	GAGTC	2 cut(s)	205, 388
Ppu21I	YACGTR	2 cut(s)	47, 511
Psp6I	CCWGG	1 cut(s)	628
PspCI	CACGTG	2 cut(s)	47, 511
PspGI	CCWGG	1 cut(s)	628
PsuI	RGATCY	1 cut(s)	592
RsaI	GTAC	1 cut(s)	443
RsaNI	GTAC	1 cut(s)	442
RseI	CAYNNNNRTG	1 cut(s)	362
SaqAI	TTAA	1 cut(s)	618
SatI	GCNGC	3 cut(s)	282, 368, 393
Sau3AI	GATC	5 cut(s)	181, 333, 499, 555, 592
SchI	GAGTC	2 cut(s)	206, 389
ScrFI	CCNGG	1 cut(s)	630
SetI	ASST	9 cut(s)	15, 49, 90, 126, 169, 357, 379, 441, 513
SmiMI	CAYNNNNRTG	1 cut(s)	362
Sse9I	AATT	1 cut(s)	655
SsiI	CCGC	2 cut(s)	339, 368
SspMI	CTAG	1 cut(s)	422
StyD4I	CCNGG	1 cut(s)	628
TaaI	ACNGT	2 cut(s)	566, 640
TaiI	ACGT	3 cut(s)	49, 441, 513
TaqI	TCGA	2 cut(s)	84, 200
TasI	AATT	1 cut(s)	655
TauI	GCSGC	1 cut(s)	370
TfiI	GAWTC	3 cut(s)	409, 418, 541
Tru1I	TTAA	1 cut(s)	618
Tru9I	TTAA	1 cut(s)	618
TscAI	CASTG	2 cut(s)	82, 217
TseI	GCWGC	2 cut(s)	281, 392
TspDTI	ATGAA	6 cut(s)	23, 53, 158, 520, 533, 548
TspGWI	ACGGA	1 cut(s)	263
TspRI	CASTG	2 cut(s)	82, 217
XspI	CTAG	1 cut(s)	422

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.