Rorug06G0234400
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
37679133 .. 37680867
1735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0234400.1

Sequence Viewer

Length: 1344 bp
ATGGGAGGCCTCGGCACTGCACAGCTATCTTTTTCAGTAGCACTGCCATGGCGCCATCCGCCCCCACAGTCAAAATCCTCACTCCAAATCCAATGCGCTCTGACCAAACAAGGACAACGCTTCCTGACCAAGCTCGCAGCCAATGCCGGCGACCCATCCGTCGCCAACAAATTGATCACCAAGTTCCTGTCGAGCTCTCCCAAGTCCACTGCTCTCACCACTCTCTCTTATCTTCTCTCTCCTCACACCACCCACCCTCACCTCTCTTCCCTCGCCCTCCCCTTGTACTCGAAAATCACAGAGGCGTCTTGGTTTGAGTGGAATCCGAAGTTGGTAGCTGCCCTTGTTGCGTTGCTTGATAAACAAGGACTACACAGTCAATCAGAAGCTTTAATCTCCGAGACCGTTTCGAAATTAGGCACCAGAGAACGAGAGCTTGCTCAGTTTCATTGCCAATTGGTGGAGTCACACTCTAAGTTAAGCTCAAAGCGTGGGTTTGATAATGCTTACGCTTATCTCTATCAGCTTCTTCAGAATTCTAACTCTGTTTATGTAAAACGACGAGCTTTTGAATCGATGGTTGGTGGTTTATGCGCCATGGATAGGCCTCGTGAAGCTGACGATTTGATTGAGGAGATGAGAGTTAAGGGACTGAAGGCGTCGGTTTTCGAGTTCAGGTCTGTGGTTTATGGCTATGGAAGGTTGGGAATGTTTGAAGAAATGCTGAAGATTGTGGACCAAATGGAGAAGCAGGGGTTTGGTGATGATACTATTTGCTCTAACATGGTTCTTTCATCATATGGAGCTCATAATGAGCTGGCTGCGATGGCAATGTGGCTTCGAAAAATGAAAGAATCGAGTGTTCCTTTCTCGATTAGGACTTACAATTCGGTGTTGAATTCGTGCCCTACGATTATGGCAATGCTGCAGGAAACGAAAGCTGTTCCGTGTTCAGTTGAAGAACTGACTGGGATTTTGGATGGTGATGAGGCTTTGGTGGTTAAAGAGTTGGTTGGATCGGCAGTTGTGGATGAGGCGATGATGTGGGATTCTAGTGAGGCCAAGTTGGATTTGCATGGCATGCATTTGGGTTCAGCTTACGTGGTAATGCTAGAATGGTTTGAGGCAATGCGATACAGGTTTGACTGTGGGGAGTATGTGGTTCCAGCAGAGGTTGTCATTGTTTGTGGATTGGGAAAGCATAGCAGTATTAGAGGTGAATCCCCGGTTAAAGATCTGGTTAAAGAGATGATGCGTCGAATGGAAAGTCCGATGAGAATCGATAGGAAGAACGGGGGGTGTTTCATTGCCAAGGGAAGAGCTGTGAAGGACTGGTTATGTTAA

Protein Analysis

447

Amino Acids

49.67

Weight (kDa)

7.57

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 158, 375
AccB1I GGYRCC 2 cut(s) 51, 419
AccB7I CCANNNNNTGG 1 cut(s) 460
AciI CCGC 1 cut(s) 59
AclWI GGATC 1 cut(s) 1024
AcsI RAATTY 2 cut(s) 535, 898
AcuI CTGAAG 3 cut(s) 515, 674, 746
AcyI GRCGYC 3 cut(s) 52, 305, 659
AfaI GTAC 1 cut(s) 287
AfiI CCNNNNNNNGG 2 cut(s) 460, 603
AgsI TTSAA 4 cut(s) 572, 716, 898, 959
AjuI GAANNNNNNNTTGG 4 cut(s) 314, 346, 564, 596
Alw21I GWGCWC 2 cut(s) 197, 808
Alw26I GTCTC 1 cut(s) 395
AlwI GGATC 1 cut(s) 1024
AoxI GGCC 3 cut(s) 7, 605, 1059
ApeKI GCWGC 4 cut(s) 137, 338, 821, 925
ApoI RAATTY 2 cut(s) 535, 898
ArsI GACNNNNNNTTYG 6 cut(s) 871, 903, 958, 990, 1252, 1284
AspLEI GCGC 3 cut(s) 54, 98, 596
AspS9I GGNCC 1 cut(s) 736
AsuC2I CCSGG 1 cut(s) 1226
AsuHPI GGTGA 6 cut(s) 169, 208, 251, 773, 995, 1229
AsuII TTCGAA 2 cut(s) 410, 841
AvaII GGWCC 1 cut(s) 736
BaeGI GKGCMC 1 cut(s) 908
BanI GGYRCC 2 cut(s) 51, 419
BanII GRGCYC 2 cut(s) 197, 808
BauI CACGAG 1 cut(s) 609
Bbv12I GWGCWC 2 cut(s) 197, 808
BbvI GCAGC 4 cut(s) 149, 325, 808, 912
BccI CCATC 5 cut(s) 63, 163, 571, 820, 974
BclI TGATCA 1 cut(s) 174
BcnI CCSGG 1 cut(s) 1226
BcoDI GTCTC 1 cut(s) 395
BfaI CTAG 2 cut(s) 1053, 1112
BfmI CTRYAG 1 cut(s) 926
BfoI RGCGCY 1 cut(s) 55
BglII AGATCT 1 cut(s) 1234
BisI GCNGC 4 cut(s) 138, 339, 822, 926
BlsI GCNGC 4 cut(s) 139, 340, 823, 927
Bme1390I CCNGG 1 cut(s) 1226
Bme18I GGWCC 1 cut(s) 736
BmgT120I GGNCC 1 cut(s) 736
BmiI GGNNCC 3 cut(s) 53, 421, 1164
BmrFI CCNGG 1 cut(s) 1226
BmrI ACTGGG 1 cut(s) 978
BmsI GCATC 1 cut(s) 1242
BmuI ACTGGG 1 cut(s) 978
BplI GAGNNNNNCTC 2 cut(s) 455, 487
Bpu14I TTCGAA 2 cut(s) 410, 841
BpuMI CCSGG 1 cut(s) 1226
Bsa29I ATCGAT 2 cut(s) 575, 1281
BsaAI YACGTR 1 cut(s) 1102
BsaBI GATNNNNATC 1 cut(s) 1277
BsaHI GRCGYC 3 cut(s) 52, 305, 659
BsaI GGTCTC 1 cut(s) 395
BsaJI CCNNGG 5 cut(s) 10, 47, 597, 1224, 1311
Bsc4I CCNNNNNNNGG 2 cut(s) 460, 603
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 2 cut(s) 973, 1337
Bse3DI GCAATG 5 cut(s) 448, 837, 927, 1134, 1305
Bse8I GATNNNNATC 1 cut(s) 1277
BseCI ATCGAT 2 cut(s) 575, 1281
BseDI CCNNGG 5 cut(s) 10, 47, 597, 1224, 1311
BseGI GGATG 4 cut(s) 55, 155, 985, 1036
BseJI GATNNNNATC 1 cut(s) 1277
BseLI CCNNNNNNNGG 2 cut(s) 460, 603
BseMI GCAATG 5 cut(s) 448, 837, 927, 1134, 1305
BseMII CTCAG 1 cut(s) 455
BseNI ACTGG 2 cut(s) 973, 1337
BseRI GAGGAG 2 cut(s) 231, 647
BseSI GKGCMC 1 cut(s) 908
BseXI GCAGC 4 cut(s) 149, 325, 808, 912
BshFI GGCC 3 cut(s) 9, 607, 1061
BshNI GGYRCC 2 cut(s) 51, 419
BshVI ATCGAT 2 cut(s) 575, 1281
BsiHKAI GWGCWC 2 cut(s) 197, 808
BsiSI CCGG 2 cut(s) 147, 1226
BslFI GGGAC 1 cut(s) 663
BslI CCNNNNNNNGG 2 cut(s) 460, 603
BsmAI GTCTC 1 cut(s) 395
BsmFI GGGAC 1 cut(s) 663
BsnI GGCC 3 cut(s) 9, 607, 1061
Bso31I GGTCTC 1 cut(s) 395
Bsp119I TTCGAA 2 cut(s) 410, 841
Bsp1286I GDGCHC 3 cut(s) 197, 808, 908
Bsp143I GATC 3 cut(s) 174, 1016, 1234
Bsp19I CCATGG 2 cut(s) 47, 597
BspACI CCGC 1 cut(s) 59
BspANI GGCC 3 cut(s) 9, 607, 1061
BspCNI CTCAG 1 cut(s) 454
BspDI ATCGAT 2 cut(s) 575, 1281
BspLI GGNNCC 3 cut(s) 53, 421, 1164
BspMAI CTGCAG 1 cut(s) 930
BspPI GGATC 1 cut(s) 1024
BspQI GCTCTTC 1 cut(s) 1312
BspT104I TTCGAA 2 cut(s) 410, 841
BspT107I GGYRCC 2 cut(s) 51, 419
BspTNI GGTCTC 1 cut(s) 395
BsrDI GCAATG 5 cut(s) 448, 837, 927, 1134, 1305
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 2 cut(s) 973, 1337
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 5 cut(s) 10, 47, 597, 1224, 1311
BssMI GATC 3 cut(s) 174, 1016, 1234
BssNI GRCGYC 3 cut(s) 52, 305, 659
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 3 cut(s) 47, 597, 1311
Bst2BI CACGAG 1 cut(s) 609
Bst4CI ACNGT 4 cut(s) 69, 377, 406, 1148
Bst6I CTCTTC 2 cut(s) 271, 1312
BstACI GRCGYC 3 cut(s) 52, 305, 659
BstAPI GCANNNNNTGC 2 cut(s) 143, 1081
BstBAI YACGTR 1 cut(s) 1102
BstBI TTCGAA 2 cut(s) 410, 841
BstC8I GCNNGC 5 cut(s) 135, 148, 438, 819, 1082
BstDEI CTNAG 2 cut(s) 441, 474
BstDSI CCRYGG 2 cut(s) 47, 597
BstF5I GGATG 4 cut(s) 55, 155, 985, 1036
BstH2I RGCGCY 1 cut(s) 55
BstHHI GCGC 3 cut(s) 54, 98, 596
BstKTI GATC 3 cut(s) 177, 1019, 1237
BstMAI GTCTC 1 cut(s) 395
BstMBI GATC 3 cut(s) 174, 1016, 1234
BstMWI GCNNNNNNNGC 5 cut(s) 58, 143, 347, 827, 1081
BstNSI RCATGY 1 cut(s) 1084
BstSCI CCNGG 1 cut(s) 1224
BstSFI CTRYAG 1 cut(s) 926
BstSLI GKGCMC 1 cut(s) 908
BstV1I GCAGC 4 cut(s) 149, 325, 808, 912
BstX2I RGATCY 1 cut(s) 1234
BstYI RGATCY 1 cut(s) 1234
Bsu15I ATCGAT 2 cut(s) 575, 1281
BsuRI GGCC 3 cut(s) 9, 607, 1061
BsuTUI ATCGAT 2 cut(s) 575, 1281
BtgI CCRYGG 2 cut(s) 47, 597
BtgZI GCGATG 2 cut(s) 839, 1052
BtsCI GGATG 4 cut(s) 55, 155, 985, 1036
BtsI GCAGTG 3 cut(s) 15, 41, 207
BtsIMutI CAGTG 3 cut(s) 15, 41, 207
Cac8I GCNNGC 5 cut(s) 135, 148, 438, 819, 1082
CfoI GCGC 3 cut(s) 54, 98, 596
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 736
ClaI ATCGAT 2 cut(s) 575, 1281
CseI GACGC 3 cut(s) 294, 648, 1244
Csp6I GTAC 1 cut(s) 286
CviAII CATG 5 cut(s) 48, 598, 784, 1076, 1081
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 2 cut(s) 441, 474
DinI GGCGCC 1 cut(s) 53
DpnI GATC 3 cut(s) 176, 1018, 1236
DpnII GATC 3 cut(s) 174, 1016, 1234
DrdI GACNNNNNNGTC 2 cut(s) 158, 375
DseDI GACNNNNNNGTC 2 cut(s) 158, 375
Eam1104I CTCTTC 2 cut(s) 271, 1312
EarI CTCTTC 2 cut(s) 271, 1312
EciI GGCGGA 1 cut(s) 48
Ecl136II GAGCTC 2 cut(s) 195, 806
Eco130I CCWWGG 3 cut(s) 47, 597, 1311
Eco147I AGGCCT 2 cut(s) 9, 607
Eco24I GRGCYC 2 cut(s) 197, 808
Eco31I GGTCTC 1 cut(s) 395
Eco47I GGWCC 1 cut(s) 736
Eco53kI GAGCTC 2 cut(s) 195, 806
Eco57I CTGAAG 3 cut(s) 515, 674, 746
EcoICRI GAGCTC 2 cut(s) 195, 806
EcoRI GAATTC 2 cut(s) 535, 898
EcoT14I CCWWGG 3 cut(s) 47, 597, 1311
EcoT22I ATGCAT 1 cut(s) 1086
EcoT38I GRGCYC 2 cut(s) 197, 808
EgeI GGCGCC 1 cut(s) 53
EheI GGCGCC 1 cut(s) 53
ErhI CCWWGG 3 cut(s) 47, 597, 1311
FaeI CATG 5 cut(s) 51, 601, 787, 1079, 1084
FaqI GGGAC 1 cut(s) 663
FatI CATG 5 cut(s) 47, 597, 783, 1075, 1080
FauNDI CATATG 1 cut(s) 799
FbaI TGATCA 1 cut(s) 174
Fnu4HI GCNGC 4 cut(s) 138, 339, 822, 926
FokI GGATG 4 cut(s) 42, 142, 992, 1043
FriOI GRGCYC 2 cut(s) 197, 808
Fsp4HI GCNGC 4 cut(s) 138, 339, 822, 926
FspBI CTAG 2 cut(s) 1053, 1112
GlaI GCGC 3 cut(s) 53, 97, 595
GluI GCNGC 4 cut(s) 138, 339, 822, 926
HaeII RGCGCY 1 cut(s) 55
HaeIII GGCC 3 cut(s) 9, 607, 1061
HapII CCGG 2 cut(s) 147, 1226
HgaI GACGC 3 cut(s) 294, 648, 1244
HhaI GCGC 3 cut(s) 54, 98, 596
Hin1I GRCGYC 3 cut(s) 52, 305, 659
Hin1II CATG 5 cut(s) 51, 601, 787, 1079, 1084
Hin6I GCGC 3 cut(s) 52, 96, 594
HinP1I GCGC 3 cut(s) 52, 96, 594
HindIII AAGCTT 1 cut(s) 387
HinfI GANTC 7 cut(s) 322, 464, 572, 854, 1049, 1220, 1278
HpaII CCGG 2 cut(s) 147, 1226
HphI GGTGA 6 cut(s) 169, 208, 251, 773, 995, 1229
Hpy166II GTNNAC 2 cut(s) 207, 736
Hpy188I TCNGA 6 cut(s) 102, 327, 385, 400, 534, 1272
Hpy188III TCNNGA 3 cut(s) 124, 611, 871
Hpy8I GTNNAC 2 cut(s) 207, 736
Hpy99I CGWCG 4 cut(s) 164, 564, 664, 1260
HpyAV CCTTC 3 cut(s) 649, 693, 1321
HpyCH4III ACNGT 4 cut(s) 69, 377, 406, 1148
HpyCH4IV ACGT 1 cut(s) 1101
HpyCH4V TGCA 4 cut(s) 20, 928, 1075, 1084
HpyF10VI GCNNNNNNNGC 5 cut(s) 58, 143, 347, 827, 1081
HpyF3I CTNAG 2 cut(s) 441, 474
HpySE526I ACGT 1 cut(s) 1101
Hsp92I GRCGYC 3 cut(s) 52, 305, 659
Hsp92II CATG 5 cut(s) 51, 601, 787, 1079, 1084
HspAI GCGC 3 cut(s) 52, 96, 594
KasI GGCGCC 1 cut(s) 51
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 3 cut(s) 174, 1016, 1234
LguI GCTCTTC 1 cut(s) 1312
LmnI GCTCC 1 cut(s) 803
Lsp1109I GCAGC 4 cut(s) 149, 325, 808, 912
LweI GCATC 1 cut(s) 1242
MaeI CTAG 2 cut(s) 1053, 1112
MaeII ACGT 1 cut(s) 1101
MaeIII GTNAC 1 cut(s) 465
MalI GATC 3 cut(s) 176, 1018, 1236
MboI GATC 3 cut(s) 174, 1016, 1234
MboII GAAGA 8 cut(s) 224, 258, 521, 728, 739, 971, 1300, 1329
MfeI CAATTG 1 cut(s) 455
MflI RGATCY 1 cut(s) 1234
MhlI GDGCHC 3 cut(s) 197, 808, 908
MluCI AATT 6 cut(s) 170, 413, 455, 535, 886, 898
Mly113I GGCGCC 1 cut(s) 52
MlyI GAGTC 1 cut(s) 473
MmeI TCCRAC 2 cut(s) 994, 1047
Mph1103I ATGCAT 1 cut(s) 1086
MroNI GCCGGC 1 cut(s) 146
MseI TTAA 7 cut(s) 392, 479, 645, 1002, 1230, 1242, 1342
MslI CAYNNNNRTG 1 cut(s) 46
MspI CCGG 2 cut(s) 147, 1226
MspR9I CCNGG 1 cut(s) 1226
MunI CAATTG 1 cut(s) 455
MwoI GCNNNNNNNGC 5 cut(s) 58, 143, 347, 827, 1081
NaeI GCCGGC 1 cut(s) 148
NarI GGCGCC 1 cut(s) 52
NciI CCSGG 1 cut(s) 1226
NcoI CCATGG 2 cut(s) 47, 597
NdeI CATATG 1 cut(s) 799
NdeII GATC 3 cut(s) 174, 1016, 1234
NgoMIV GCCGGC 1 cut(s) 146
NlaIII CATG 5 cut(s) 51, 601, 787, 1079, 1084
NlaIV GGNNCC 3 cut(s) 53, 421, 1164
NmuCI GTSAC 1 cut(s) 465
NsiI ATGCAT 1 cut(s) 1086
NspI RCATGY 1 cut(s) 1084
NspV TTCGAA 2 cut(s) 410, 841
PaeI GCATGC 1 cut(s) 1084
PceI AGGCCT 2 cut(s) 9, 607
PciSI GCTCTTC 1 cut(s) 1312
PcsI WCGNNNNNNNCGW 1 cut(s) 908
PdiI GCCGGC 1 cut(s) 148
PfeI GAWTC 6 cut(s) 322, 572, 854, 1049, 1220, 1278
PflMI CCANNNNNTGG 1 cut(s) 460
PkrI GCNGC 4 cut(s) 139, 340, 823, 927
PleI GAGTC 1 cut(s) 472
PluTI GGCGCC 1 cut(s) 55
PpsI GAGTC 1 cut(s) 472
Ppu21I YACGTR 1 cut(s) 1102
Psp124BI GAGCTC 2 cut(s) 197, 808
PspN4I GGNNCC 3 cut(s) 53, 421, 1164
PspPI GGNCC 1 cut(s) 736
PstI CTGCAG 1 cut(s) 930
PsuI RGATCY 1 cut(s) 1234
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 46
SacI GAGCTC 2 cut(s) 197, 808
SapI GCTCTTC 1 cut(s) 1312
SaqAI TTAA 7 cut(s) 392, 479, 645, 1002, 1230, 1242, 1342
SatI GCNGC 4 cut(s) 138, 339, 822, 926
Sau3AI GATC 3 cut(s) 174, 1016, 1234
Sau96I GGNCC 1 cut(s) 736
SchI GAGTC 1 cut(s) 473
ScrFI CCNGG 1 cut(s) 1226
SduI GDGCHC 3 cut(s) 197, 808, 908
SfaNI GCATC 1 cut(s) 1242
SfcI CTRYAG 1 cut(s) 926
SfoI GGCGCC 1 cut(s) 53
SfuI TTCGAA 2 cut(s) 410, 841
SinI GGWCC 1 cut(s) 736
SmiMI CAYNNNNRTG 1 cut(s) 46
SphI GCATGC 1 cut(s) 1084
Sse9I AATT 6 cut(s) 170, 413, 455, 535, 886, 898
SseBI AGGCCT 2 cut(s) 9, 607
SsiI CCGC 1 cut(s) 59
SspDI GGCGCC 1 cut(s) 51
SspMI CTAG 2 cut(s) 1053, 1112
SstI GAGCTC 2 cut(s) 197, 808
StuI AGGCCT 2 cut(s) 9, 607
StyD4I CCNGG 1 cut(s) 1224
StyI CCWWGG 3 cut(s) 47, 597, 1311
TaaI ACNGT 4 cut(s) 69, 377, 406, 1148
TaiI ACGT 1 cut(s) 1104
TasI AATT 6 cut(s) 170, 413, 455, 535, 886, 898
TatI WGTACW 1 cut(s) 285
TfiI GAWTC 6 cut(s) 322, 572, 854, 1049, 1220, 1278
Tru1I TTAA 7 cut(s) 392, 479, 645, 1002, 1230, 1242, 1342
Tru9I TTAA 7 cut(s) 392, 479, 645, 1002, 1230, 1242, 1342
TscAI CASTG 3 cut(s) 22, 48, 214
TseFI GTSAC 1 cut(s) 465
TseI GCWGC 4 cut(s) 137, 338, 821, 925
Tsp45I GTSAC 1 cut(s) 465
TspDTI ATGAA 4 cut(s) 437, 783, 863, 1294
TspGWI ACGGA 2 cut(s) 148, 936
TspRI CASTG 3 cut(s) 22, 48, 214
Van91I CCANNNNNTGG 1 cut(s) 460
VpaK11BI GGWCC 1 cut(s) 736
XapI RAATTY 2 cut(s) 535, 898
XceI RCATGY 1 cut(s) 1084
XspI CTAG 2 cut(s) 1053, 1112
Zsp2I ATGCAT 1 cut(s) 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.