Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004737

Physical Location & Seq

Genomic Coordinates Forward (+)

1635682 .. 1638335

Gene Structure 2654 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G014900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 654 bp

ATGGCACTCAAGCTTCATGGCCTTCCCCTCTCAACATGCACCGGTCGTGTCTTAACCATTTTCCATGAAAAAAGCTTGGATTTCGAGCTCGTCCCTGTCAACCTTCCTGCTGGAGAACACAAGCAGCCTGCTTTCCTCGCCAAAAATCCCTTTGGACAGATTCCAGTGCTAGAAGATGGTGATCTTACTCTTTTTGAGTCTAGAGCTATCACAGCATATGTGGCTGAGAAATTCAAGGACACTGGTGCCGATCTGATTAGGCACAACAACCTGAAAGAGGCTGCATTAGTGAAGGTCTGGACAGAAGCGGAGTCTCAGAACTTCAACCCTGCAATCTCTGCCATTGTCTTCCAACATTTGGTGGCGCCAATATACGGCATGACACCAGATCAAGCGGTCATCGACGCCAACCTCGAGAAGCTTGCGAAAGTGCTGGACGTGTACGAGGCTAAGCTGAGCAGCACCAAGTACTTGGCTGGTGATTTCTATAGCCTTGCTGACCTAAACCACCTTCCCTACACTCATTATTTCATGAAGACTCCATGGGCTTCGTTGGTCAATGAGCGCTCCCATGTTAAGGCTTGGTGGGAGGACATTTCTTCTAGGCCTGCTTTCAAGAAGGTGGCTGAGGCCATGACCATGGGACAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009635 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0032991 GO:0034641 GO:0042221 GO:0042802 GO:0042803 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0046983 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

218

Amino Acids

24.26

Weight (kDa)

6.24

Isoelectric Point (pI)

28.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62760
fragaria_vesca	FvH4_2g25180 FvH4_2g25180 FvH4_5g24660
malus_domestica	MD03G1283000.v1.1 MD06G1012200.v1.1 MD11G1303600.v1.1
prunus_persica	Prupe.5G014900_v2.0.a1 Prupe.8G256600_v2.0.a1 Prupe.8G260300_v2.0.a1
pyrus_communis	pycom06g01020
rosa_chinensis	RchiOBHm_Chr6g0293301 RchiOBHm_Chr7g0215041
rosa_laevigata	RLG00000002697 RLG00000011960
rosa_multiflora	Rmu_ssc0000134.1_g000067 Rmu_ssc0000162.1_g000037
rosa_roxburghii	Rroxscaffold_3G00244640 Rroxscaffold_7G00174270
rosa_rugosa	Rorug06G0234400 Rorug07G0149700
rosa_samantha	Rh6AG347200 Rh6BG354500 Rh6CG361000 Rh6DG347600 Rh7AG286700 Rh7BG278200 Rh7CG306100 Rh7DG290200
rosa_wichuraiana	Rw6G030220 Rw7G024450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	245, 364
AccB7I	CCANNNNNTGG	1 cut(s)	358
AciI	CCGC	2 cut(s)	308, 395
AcsI	RAATTY	1 cut(s)	230
AcyI	GRCGYC	2 cut(s)	365, 405
AfaI	GTAC	2 cut(s)	443, 470
AfeI	AGCGCT	1 cut(s)	566
AfiI	CCNNNNNNNGG	4 cut(s)	277, 358, 374, 577
AflIII	ACRYGT	1 cut(s)	438
AgeI	ACCGGT	1 cut(s)	41
AgsI	TTSAA	3 cut(s)	235, 325, 616
AjiI	CACGTC	1 cut(s)	439
AluBI	AGCT	6 cut(s)	13, 75, 88, 206, 421, 454
AluI	AGCT	6 cut(s)	13, 75, 88, 206, 421, 454
Alw21I	GWGCWC	1 cut(s)	90
Alw26I	GTCTC	1 cut(s)	318
Ama87I	CYCGRG	1 cut(s)	413
Aor51HI	AGCGCT	1 cut(s)	566
AoxI	GGCC	3 cut(s)	19, 605, 630
ApeKI	GCWGC	3 cut(s)	124, 281, 459
ApoI	RAATTY	1 cut(s)	230
AsiGI	ACCGGT	1 cut(s)	41
AspLEI	GCGC	2 cut(s)	367, 567
AsuHPI	GGTGA	2 cut(s)	191, 491
AvaI	CYCGRG	1 cut(s)	413
BanI	GGYRCC	2 cut(s)	245, 364
BanII	GRGCYC	1 cut(s)	90
BbsI	GAAGAC	2 cut(s)	340, 542
Bbv12I	GWGCWC	1 cut(s)	90
BbvCI	CCTCAGC	1 cut(s)	627
BbvI	GCAGC	3 cut(s)	136, 268, 471
BccI	CCATC	1 cut(s)	170
BceAI	ACGGC	1 cut(s)	391
BcgI	CGANNNNNNTGC	2 cut(s)	404, 438
BcoDI	GTCTC	1 cut(s)	318
BfaI	CTAG	3 cut(s)	170, 201, 603
BfmI	CTRYAG	1 cut(s)	487
BfoI	RGCGCY	2 cut(s)	368, 568
BisI	GCNGC	3 cut(s)	125, 282, 460
BlpI	GCTNAGC	2 cut(s)	450, 455
BlsI	GCNGC	3 cut(s)	126, 283, 461
BmcAI	AGTACT	1 cut(s)	470
BmeT110I	CYCGRG	1 cut(s)	413
BmgBI	CACGTC	1 cut(s)	439
BmiI	GGNNCC	2 cut(s)	247, 366
BpiI	GAAGAC	2 cut(s)	340, 542
BpmI	CTGGAG	1 cut(s)	132
Bpu10I	CCTNAGC	1 cut(s)	627
Bpu1102I	GCTNAGC	2 cut(s)	450, 455
BsaBI	GATNNNNATC	1 cut(s)	180
BsaHI	GRCGYC	2 cut(s)	365, 405
BsaJI	CCNNGG	2 cut(s)	542, 639
BsaWI	WCCGGW	1 cut(s)	41
Bsc4I	CCNNNNNNNGG	4 cut(s)	277, 358, 374, 577
Bse118I	RCCGGY	1 cut(s)	41
Bse1I	ACTGG	2 cut(s)	164, 247
Bse8I	GATNNNNATC	1 cut(s)	180
BseDI	CCNNGG	2 cut(s)	542, 639
BseJI	GATNNNNATC	1 cut(s)	180
BseLI	CCNNNNNNNGG	4 cut(s)	277, 358, 374, 577
BseMII	CTCAG	4 cut(s)	216, 329, 446, 618
BseNI	ACTGG	2 cut(s)	164, 247
BseXI	GCAGC	3 cut(s)	136, 268, 471
Bsh1285I	CGRYCG	1 cut(s)	46
BshFI	GGCC	3 cut(s)	21, 607, 632
BshNI	GGYRCC	2 cut(s)	245, 364
BshTI	ACCGGT	1 cut(s)	41
BsiEI	CGRYCG	1 cut(s)	46
BsiHKAI	GWGCWC	1 cut(s)	90
BsiHKCI	CYCGRG	1 cut(s)	413
BsiSI	CCGG	1 cut(s)	42
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	4 cut(s)	277, 358, 374, 577
BsmAI	GTCTC	1 cut(s)	318
BsmFI	GGGAC	1 cut(s)	77
BsnI	GGCC	3 cut(s)	21, 607, 632
BsoBI	CYCGRG	1 cut(s)	413
Bsp1286I	GDGCHC	1 cut(s)	90
Bsp143I	GATC	3 cut(s)	181, 250, 388
Bsp1720I	GCTNAGC	2 cut(s)	450, 455
Bsp19I	CCATGG	2 cut(s)	542, 639
BspACI	CCGC	2 cut(s)	308, 395
BspANI	GGCC	3 cut(s)	21, 607, 632
BspCNI	CTCAG	4 cut(s)	217, 328, 447, 619
BspHI	TCATGA	1 cut(s)	531
BspLI	GGNNCC	2 cut(s)	247, 366
BspT107I	GGYRCC	2 cut(s)	245, 364
BsrFI	RCCGGY	1 cut(s)	41
BsrI	ACTGG	2 cut(s)	164, 247
BssAI	RCCGGY	1 cut(s)	41
BssECI	CCNNGG	2 cut(s)	542, 639
BssMI	GATC	3 cut(s)	181, 250, 388
BssNI	GRCGYC	2 cut(s)	365, 405
BssT1I	CCWWGG	2 cut(s)	542, 639
BstACI	GRCGYC	2 cut(s)	365, 405
BstAPI	GCANNNNNTGC	1 cut(s)	338
BstC8I	GCNNGC	3 cut(s)	129, 423, 609
BstDEI	CTNAG	5 cut(s)	225, 315, 450, 455, 627
BstDSI	CCRYGG	2 cut(s)	542, 639
BstENI	CCTNNNNNAGG	1 cut(s)	275
BstH2I	RGCGCY	2 cut(s)	368, 568
BstHHI	GCGC	2 cut(s)	367, 567
BstKTI	GATC	3 cut(s)	184, 253, 391
BstMAI	GTCTC	1 cut(s)	318
BstMBI	GATC	3 cut(s)	181, 250, 388
BstMCI	CGRYCG	1 cut(s)	46
BstMWI	GCNNNNNNNGC	4 cut(s)	137, 212, 221, 338
BstNSI	RCATGY	1 cut(s)	39
BstSFI	CTRYAG	1 cut(s)	487
BstV1I	GCAGC	3 cut(s)	136, 268, 471
BstV2I	GAAGAC	2 cut(s)	340, 542
BstXI	CCANNNNNNTGG	2 cut(s)	472, 640
BsuRI	GGCC	3 cut(s)	21, 607, 632
BtgI	CCRYGG	2 cut(s)	542, 639
BtrI	CACGTC	1 cut(s)	439
BtsIMutI	CAGTG	2 cut(s)	171, 240
Cac8I	GCNNGC	3 cut(s)	129, 423, 609
CciI	TCATGA	1 cut(s)	531
CfoI	GCGC	2 cut(s)	367, 567
Cfr10I	RCCGGY	1 cut(s)	41
CseI	GACGC	1 cut(s)	413
Csp6I	GTAC	2 cut(s)	442, 469
CspAI	ACCGGT	1 cut(s)	41
CviAII	CATG	9 cut(s)	17, 36, 65, 379, 532, 543, 572, 634, 640
CviQI	GTAC	2 cut(s)	442, 469
DdeI	CTNAG	5 cut(s)	225, 315, 450, 455, 627
DinI	GGCGCC	1 cut(s)	366
DpnI	GATC	3 cut(s)	183, 252, 390
DpnII	GATC	3 cut(s)	181, 250, 388
Ecl136II	GAGCTC	1 cut(s)	88
Eco130I	CCWWGG	2 cut(s)	542, 639
Eco147I	AGGCCT	1 cut(s)	607
Eco24I	GRGCYC	1 cut(s)	90
Eco47III	AGCGCT	1 cut(s)	566
Eco53kI	GAGCTC	1 cut(s)	88
Eco88I	CYCGRG	1 cut(s)	413
EcoICRI	GAGCTC	1 cut(s)	88
EcoNI	CCTNNNNNAGG	1 cut(s)	275
EcoT14I	CCWWGG	2 cut(s)	542, 639
EcoT38I	GRGCYC	1 cut(s)	90
EgeI	GGCGCC	1 cut(s)	366
EheI	GGCGCC	1 cut(s)	366
ErhI	CCWWGG	2 cut(s)	542, 639
FaeI	CATG	9 cut(s)	20, 39, 68, 382, 535, 546, 575, 637, 643
FaqI	GGGAC	1 cut(s)	77
FatI	CATG	9 cut(s)	16, 35, 64, 378, 531, 542, 571, 633, 639
FauNDI	CATATG	1 cut(s)	217
Fnu4HI	GCNGC	3 cut(s)	125, 282, 460
FriOI	GRGCYC	1 cut(s)	90
Fsp4HI	GCNGC	3 cut(s)	125, 282, 460
FspBI	CTAG	3 cut(s)	170, 201, 603
GlaI	GCGC	2 cut(s)	366, 566
GluI	GCNGC	3 cut(s)	125, 282, 460
GsuI	CTGGAG	1 cut(s)	132
HaeII	RGCGCY	2 cut(s)	368, 568
HaeIII	GGCC	3 cut(s)	21, 607, 632
HapII	CCGG	1 cut(s)	42
HgaI	GACGC	1 cut(s)	413
HhaI	GCGC	2 cut(s)	367, 567
Hin1I	GRCGYC	2 cut(s)	365, 405
Hin1II	CATG	9 cut(s)	20, 39, 68, 382, 535, 546, 575, 637, 643
Hin6I	GCGC	2 cut(s)	365, 565
HinP1I	GCGC	2 cut(s)	365, 565
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HindIII	AAGCTT	3 cut(s)	11, 73, 419
HinfI	GANTC	4 cut(s)	160, 197, 311, 538
HpaII	CCGG	1 cut(s)	42
HphI	GGTGA	2 cut(s)	191, 491
Hpy166II	GTNNAC	2 cut(s)	100, 442
Hpy188I	TCNGA	2 cut(s)	255, 318
Hpy188III	TCNNGA	5 cut(s)	201, 298, 415, 532, 616
Hpy8I	GTNNAC	2 cut(s)	100, 442
Hpy99I	CGWCG	1 cut(s)	407
HpyAV	CCTTC	5 cut(s)	32, 113, 286, 521, 613
HpyCH4IV	ACGT	1 cut(s)	438
HpyCH4V	TGCA	3 cut(s)	39, 284, 332
HpyF10VI	GCNNNNNNNGC	4 cut(s)	137, 212, 221, 338
HpyF3I	CTNAG	5 cut(s)	225, 315, 450, 455, 627
HpySE526I	ACGT	1 cut(s)	438
Hsp92I	GRCGYC	2 cut(s)	365, 405
Hsp92II	CATG	9 cut(s)	20, 39, 68, 382, 535, 546, 575, 637, 643
HspAI	GCGC	2 cut(s)	365, 565
KasI	GGCGCC	1 cut(s)	364
Kzo9I	GATC	3 cut(s)	181, 250, 388
LmnI	GCTCC	1 cut(s)	572
Lsp1109I	GCAGC	3 cut(s)	136, 268, 471
MaeI	CTAG	3 cut(s)	170, 201, 603
MaeII	ACGT	1 cut(s)	438
MalI	GATC	3 cut(s)	183, 252, 390
MboI	GATC	3 cut(s)	181, 250, 388
MboII	GAAGA	4 cut(s)	185, 340, 547, 591
MhlI	GDGCHC	1 cut(s)	90
MluCI	AATT	1 cut(s)	230
Mly113I	GGCGCC	1 cut(s)	365
MlyI	GAGTC	3 cut(s)	206, 320, 532
MmeI	TCCRAC	1 cut(s)	376
MnlI	CCTC	7 cut(s)	38, 146, 271, 422, 439, 583, 622
MseI	TTAA	2 cut(s)	53, 576
MslI	CAYNNNNRTG	1 cut(s)	638
MspI	CCGG	1 cut(s)	42
MwoI	GCNNNNNNNGC	4 cut(s)	137, 212, 221, 338
NarI	GGCGCC	1 cut(s)	365
NcoI	CCATGG	2 cut(s)	542, 639
NdeI	CATATG	1 cut(s)	217
NdeII	GATC	3 cut(s)	181, 250, 388
NlaIII	CATG	9 cut(s)	20, 39, 68, 382, 535, 546, 575, 637, 643
NlaIV	GGNNCC	2 cut(s)	247, 366
NspI	RCATGY	1 cut(s)	39
PaeR7I	CTCGAG	1 cut(s)	413
PagI	TCATGA	1 cut(s)	531
PceI	AGGCCT	1 cut(s)	607
PcsI	WCGNNNNNNNCGW	1 cut(s)	411
PfeI	GAWTC	1 cut(s)	160
PflMI	CCANNNNNTGG	1 cut(s)	358
PinAI	ACCGGT	1 cut(s)	41
PkrI	GCNGC	3 cut(s)	126, 283, 461
PleI	GAGTC	3 cut(s)	205, 319, 532
PluTI	GGCGCC	1 cut(s)	368
PpsI	GAGTC	3 cut(s)	205, 319, 532
Psp124BI	GAGCTC	1 cut(s)	90
PspN4I	GGNNCC	2 cut(s)	247, 366
RsaI	GTAC	2 cut(s)	443, 470
RsaNI	GTAC	2 cut(s)	442, 469
RseI	CAYNNNNRTG	1 cut(s)	638
SacI	GAGCTC	1 cut(s)	90
SaqAI	TTAA	2 cut(s)	53, 576
SatI	GCNGC	3 cut(s)	125, 282, 460
Sau3AI	GATC	3 cut(s)	181, 250, 388
ScaI	AGTACT	1 cut(s)	470
SchI	GAGTC	3 cut(s)	206, 320, 532
SduI	GDGCHC	1 cut(s)	90
SfcI	CTRYAG	1 cut(s)	487
SfoI	GGCGCC	1 cut(s)	366
Sfr274I	CTCGAG	1 cut(s)	413
SlaI	CTCGAG	1 cut(s)	413
SmiMI	CAYNNNNRTG	1 cut(s)	638
SmlI	CTYRAG	2 cut(s)	8, 413
SmoI	CTYRAG	2 cut(s)	8, 413
Sse9I	AATT	1 cut(s)	230
SseBI	AGGCCT	1 cut(s)	607
SsiI	CCGC	2 cut(s)	308, 395
SspDI	GGCGCC	1 cut(s)	364
SspMI	CTAG	3 cut(s)	170, 201, 603
SstI	GAGCTC	1 cut(s)	90
StuI	AGGCCT	1 cut(s)	607
StyI	CCWWGG	2 cut(s)	542, 639
TaiI	ACGT	1 cut(s)	441
TaqI	TCGA	3 cut(s)	84, 402, 414
TasI	AATT	1 cut(s)	230
TatI	WGTACW	1 cut(s)	468
TfiI	GAWTC	1 cut(s)	160
Tru1I	TTAA	2 cut(s)	53, 576
Tru9I	TTAA	2 cut(s)	53, 576
TscAI	CASTG	2 cut(s)	171, 247
TseI	GCWGC	3 cut(s)	124, 281, 459
TspDTI	ATGAA	4 cut(s)	5, 81, 520, 548
TspRI	CASTG	2 cut(s)	171, 247
Van91I	CCANNNNNTGG	1 cut(s)	358
XagI	CCTNNNNNAGG	1 cut(s)	275
XapI	RAATTY	1 cut(s)	230
XbaI	TCTAGA	1 cut(s)	200
XceI	RCATGY	1 cut(s)	39
XhoI	CTCGAG	1 cut(s)	413
XspI	CTAG	3 cut(s)	170, 201, 603
ZrmI	AGTACT	1 cut(s)	470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.