Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004737

Physical Location & Seq

Genomic Coordinates Reverse (-)

22031323 .. 22032149

Gene Structure 827 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G260300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 582 bp

ATGGTGCTCAAGCTGCATGGATTTCCTGTATCTCCCAGCACGGCTCGCGTAGAGGCTTGTCTCCATGAAAAAACTCTCGACTTCGAGTTCGTCCCGGTTAATATTTTGGGCCTTGAAAACAAGCAGCCTTCTTTTCTTGCCAAGAATCCCTTTGGCCAGATTCCAGCATTTGAAGATGGTGACGTCACACTATTTGAAGCTGCATTGGTGAAGGTATGGATGGAAGTGGAATCTCAACAATACCACCCAGCAATCTGCCCCATTGTGTATGAGTTTTTCGGGAAGCCTGTGGTGGGCTGTAAGCCCGATCAAACAGTAATCGATGCGAGCTTAGAGAAGCTCAAGAAGGTGCTCGACATGTACGAGACCAGGCTGAGCAGCAACAAGTACCTTGCTGGTGATTTCTATAGCCTGGCTGACCTTCACCACTTCGCTTACACTTTTTATTTCATGAAGACTCCTTGGTCTTCATTGATAAACGATCGTCCTCATGTTAAGGCGTGGTGGGAGGACATTTCAGCTAGGCCTGCCTCTGTCAAAGTGGCTGAGGGCATGAATTTTGGTGAAGTTGAAATTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009635 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0032991 GO:0034641 GO:0042221 GO:0042802 GO:0042803 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0046983 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

194

Amino Acids

21.92

Weight (kDa)

5.51

Isoelectric Point (pI)

39.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62760
fragaria_vesca	FvH4_2g25180 FvH4_2g25180 FvH4_5g24660
malus_domestica	MD03G1283000.v1.1 MD06G1012200.v1.1 MD11G1303600.v1.1
prunus_persica	Prupe.5G014900_v2.0.a1 Prupe.8G256600_v2.0.a1 Prupe.8G260300_v2.0.a1
pyrus_communis	pycom06g01020
rosa_chinensis	RchiOBHm_Chr6g0293301 RchiOBHm_Chr7g0215041
rosa_laevigata	RLG00000002697 RLG00000011960
rosa_multiflora	Rmu_ssc0000134.1_g000067 Rmu_ssc0000162.1_g000037
rosa_roxburghii	Rroxscaffold_3G00244640 Rroxscaffold_7G00174270
rosa_rugosa	Rorug06G0234400 Rorug07G0149700
rosa_samantha	Rh6AG347200 Rh6BG354500 Rh6CG361000 Rh6DG347600 Rh7AG286700 Rh7BG278200 Rh7CG306100 Rh7DG290200
rosa_wichuraiana	Rw6G030220 Rw7G024450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	463
AatII	GACGTC	1 cut(s)	186
AccII	CGCG	1 cut(s)	48
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	1 cut(s)	556
AcyI	GRCGYC	1 cut(s)	183
AfaI	GTAC	2 cut(s)	362, 389
AfiI	CCNNNNNNNGG	1 cut(s)	293
AflIII	ACRYGT	1 cut(s)	357
AgsI	TTSAA	4 cut(s)	116, 173, 197, 572
AjnI	CCWGG	2 cut(s)	368, 411
AluBI	AGCT	5 cut(s)	13, 200, 330, 340, 521
AluI	AGCT	5 cut(s)	13, 200, 330, 340, 521
Alw21I	GWGCWC	2 cut(s)	9, 354
Alw26I	GTCTC	2 cut(s)	65, 359
AoxI	GGCC	3 cut(s)	109, 154, 524
ApeKI	GCWGC	4 cut(s)	13, 124, 200, 378
ApoI	RAATTY	1 cut(s)	556
ArsI	GACNNNNNNTTYG	2 cut(s)	71, 103
AspS9I	GGNCC	1 cut(s)	109
AsuC2I	CCSGG	1 cut(s)	95
AsuHPI	GGTGA	5 cut(s)	191, 220, 410, 416, 575
BalI	TGGCCA	1 cut(s)	156
BbsI	GAAGAC	2 cut(s)	459, 461
Bbv12I	GWGCWC	2 cut(s)	9, 354
BbvCI	CCTCAGC	1 cut(s)	546
BbvI	GCAGC	3 cut(s)	136, 187, 390
BccI	CCATC	2 cut(s)	170, 214
BceAI	ACGGC	1 cut(s)	57
BciT130I	CCWGG	2 cut(s)	370, 413
BcnI	CCSGG	1 cut(s)	95
BcoDI	GTCTC	2 cut(s)	65, 359
BfaI	CTAG	1 cut(s)	522
BfmI	CTRYAG	1 cut(s)	406
BisI	GCNGC	4 cut(s)	14, 125, 201, 379
BlpI	GCTNAGC	1 cut(s)	374
BlsI	GCNGC	4 cut(s)	15, 126, 202, 380
Bme1390I	CCNGG	3 cut(s)	95, 370, 413
BmgT120I	GGNCC	1 cut(s)	109
BmrFI	CCNGG	3 cut(s)	95, 370, 413
BmsI	GCATC	1 cut(s)	313
BpiI	GAAGAC	2 cut(s)	459, 461
Bpu10I	CCTNAGC	1 cut(s)	546
Bpu1102I	GCTNAGC	1 cut(s)	374
BpuEI	CTTGAG	1 cut(s)	326
BpuMI	CCSGG	1 cut(s)	95
Bsa29I	ATCGAT	1 cut(s)	321
BsaHI	GRCGYC	1 cut(s)	183
BsaI	GGTCTC	1 cut(s)	359
BsaJI	CCNNGG	1 cut(s)	461
Bsc4I	CCNNNNNNNGG	1 cut(s)	293
BseBI	CCWGG	2 cut(s)	370, 413
BseCI	ATCGAT	1 cut(s)	321
BseDI	CCNNGG	1 cut(s)	461
BseGI	GGATG	1 cut(s)	225
BseLI	CCNNNNNNNGG	1 cut(s)	293
BseMII	CTCAG	2 cut(s)	365, 537
BseXI	GCAGC	3 cut(s)	136, 187, 390
BseYI	CCCAGC	2 cut(s)	35, 247
Bsh1236I	CGCG	1 cut(s)	48
Bsh1285I	CGRYCG	1 cut(s)	484
BshFI	GGCC	3 cut(s)	111, 156, 526
BshVI	ATCGAT	1 cut(s)	321
BsiEI	CGRYCG	1 cut(s)	484
BsiHKAI	GWGCWC	2 cut(s)	9, 354
BsiSI	CCGG	1 cut(s)	95
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	1 cut(s)	293
BsmAI	GTCTC	2 cut(s)	65, 359
BsmFI	GGGAC	1 cut(s)	77
BsnI	GGCC	3 cut(s)	111, 156, 526
Bso31I	GGTCTC	1 cut(s)	359
Bsp1286I	GDGCHC	2 cut(s)	9, 354
Bsp143I	GATC	2 cut(s)	307, 481
Bsp1720I	GCTNAGC	1 cut(s)	374
BspANI	GGCC	3 cut(s)	111, 156, 526
BspCNI	CTCAG	2 cut(s)	366, 538
BspDI	ATCGAT	1 cut(s)	321
BspFNI	CGCG	1 cut(s)	48
BspHI	TCATGA	1 cut(s)	450
BspTNI	GGTCTC	1 cut(s)	359
BssECI	CCNNGG	1 cut(s)	461
BssMI	GATC	2 cut(s)	307, 481
BssNI	GRCGYC	1 cut(s)	183
BssT1I	CCWWGG	1 cut(s)	461
Bst2UI	CCWGG	2 cut(s)	370, 413
Bst4CI	ACNGT	1 cut(s)	316
BstACI	GRCGYC	1 cut(s)	183
BstC8I	GCNNGC	3 cut(s)	46, 328, 528
BstDEI	CTNAG	3 cut(s)	331, 374, 546
BstF5I	GGATG	1 cut(s)	225
BstFNI	CGCG	1 cut(s)	48
BstKTI	GATC	2 cut(s)	310, 484
BstMAI	GTCTC	2 cut(s)	65, 359
BstMBI	GATC	2 cut(s)	307, 481
BstMCI	CGRYCG	1 cut(s)	484
BstMWI	GCNNNNNNNGC	3 cut(s)	13, 45, 527
BstNI	CCWGG	2 cut(s)	370, 413
BstNSI	RCATGY	1 cut(s)	361
BstSCI	CCNGG	3 cut(s)	93, 368, 411
BstSFI	CTRYAG	1 cut(s)	406
BstUI	CGCG	1 cut(s)	48
BstV1I	GCAGC	3 cut(s)	136, 187, 390
BstV2I	GAAGAC	2 cut(s)	459, 461
Bsu15I	ATCGAT	1 cut(s)	321
BsuRI	GGCC	3 cut(s)	111, 156, 526
BsuTUI	ATCGAT	1 cut(s)	321
BtsCI	GGATG	1 cut(s)	225
Cac8I	GCNNGC	3 cut(s)	46, 328, 528
CciI	TCATGA	1 cut(s)	450
Cfr13I	GGNCC	1 cut(s)	109
ClaI	ATCGAT	1 cut(s)	321
Csp6I	GTAC	2 cut(s)	361, 388
CviAII	CATG	6 cut(s)	17, 65, 358, 451, 491, 553
CviQI	GTAC	2 cut(s)	361, 388
DdeI	CTNAG	3 cut(s)	331, 374, 546
DpnI	GATC	2 cut(s)	309, 483
DpnII	GATC	2 cut(s)	307, 481
DrdI	GACNNNNNNGTC	1 cut(s)	463
DseDI	GACNNNNNNGTC	1 cut(s)	463
EaeI	YGGCCR	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	461
Eco147I	AGGCCT	1 cut(s)	526
Eco31I	GGTCTC	1 cut(s)	359
EcoRII	CCWGG	2 cut(s)	368, 411
EcoT14I	CCWWGG	1 cut(s)	461
ErhI	CCWWGG	1 cut(s)	461
FaeI	CATG	6 cut(s)	20, 68, 361, 454, 494, 556
FaiI	YATR	9 cut(s)	18, 66, 217, 270, 359, 408, 452, 492, 554
FalI	AAGNNNNNCTT	2 cut(s)	134, 166
FaqI	GGGAC	1 cut(s)	77
FatI	CATG	6 cut(s)	16, 64, 357, 450, 490, 552
Fnu4HI	GCNGC	4 cut(s)	14, 125, 201, 379
FokI	GGATG	1 cut(s)	232
Fsp4HI	GCNGC	4 cut(s)	14, 125, 201, 379
FspBI	CTAG	1 cut(s)	522
GluI	GCNGC	4 cut(s)	14, 125, 201, 379
GsaI	CCCAGC	2 cut(s)	39, 251
HaeIII	GGCC	3 cut(s)	111, 156, 526
HapII	CCGG	1 cut(s)	95
Hin1I	GRCGYC	1 cut(s)	183
Hin1II	CATG	6 cut(s)	20, 68, 361, 454, 494, 556
HinfI	GANTC	4 cut(s)	145, 160, 230, 457
HpaII	CCGG	1 cut(s)	95
HphI	GGTGA	5 cut(s)	191, 220, 410, 416, 575
Hpy188III	TCNNGA	4 cut(s)	77, 280, 343, 451
HpyAV	CCTTC	4 cut(s)	138, 205, 340, 431
HpyCH4III	ACNGT	1 cut(s)	316
HpyCH4IV	ACGT	1 cut(s)	183
HpyCH4V	TGCA	2 cut(s)	16, 203
HpyF10VI	GCNNNNNNNGC	3 cut(s)	13, 45, 527
HpyF3I	CTNAG	3 cut(s)	331, 374, 546
HpySE526I	ACGT	1 cut(s)	183
Hsp92I	GRCGYC	1 cut(s)	183
Hsp92II	CATG	6 cut(s)	20, 68, 361, 454, 494, 556
Kzo9I	GATC	2 cut(s)	307, 481
Lsp1109I	GCAGC	3 cut(s)	136, 187, 390
LweI	GCATC	1 cut(s)	313
MaeI	CTAG	1 cut(s)	522
MaeII	ACGT	1 cut(s)	183
MaeIII	GTNAC	2 cut(s)	179, 184
MalI	GATC	2 cut(s)	309, 483
MboI	GATC	2 cut(s)	307, 481
MboII	GAAGA	3 cut(s)	185, 459, 466
MhlI	GDGCHC	2 cut(s)	9, 354
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	2 cut(s)	556, 573
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	1 cut(s)	451
MnlI	CCTC	5 cut(s)	46, 498, 502, 541, 541
Mox20I	TGGCCA	1 cut(s)	156
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	3 cut(s)	99, 495, 576
Msp20I	TGGCCA	1 cut(s)	156
MspI	CCGG	1 cut(s)	95
MspR9I	CCNGG	3 cut(s)	95, 370, 413
MvaI	CCWGG	2 cut(s)	370, 413
MvnI	CGCG	1 cut(s)	48
MwoI	GCNNNNNNNGC	3 cut(s)	13, 45, 527
NciI	CCSGG	1 cut(s)	95
NdeII	GATC	2 cut(s)	307, 481
NlaIII	CATG	6 cut(s)	20, 68, 361, 454, 494, 556
NmuCI	GTSAC	2 cut(s)	179, 184
NspI	RCATGY	1 cut(s)	361
PagI	TCATGA	1 cut(s)	450
PceI	AGGCCT	1 cut(s)	526
PciI	ACATGT	1 cut(s)	357
PcsI	WCGNNNNNNNCGW	1 cut(s)	360
PfeI	GAWTC	3 cut(s)	145, 160, 230
PkrI	GCNGC	4 cut(s)	15, 126, 202, 380
Ple19I	CGATCG	1 cut(s)	484
PleI	GAGTC	1 cut(s)	451
PpsI	GAGTC	1 cut(s)	451
PscI	ACATGT	1 cut(s)	357
Psp6I	CCWGG	2 cut(s)	368, 411
PspFI	CCCAGC	2 cut(s)	35, 247
PspGI	CCWGG	2 cut(s)	368, 411
PspPI	GGNCC	1 cut(s)	109
PvuI	CGATCG	1 cut(s)	484
RsaI	GTAC	2 cut(s)	362, 389
RsaNI	GTAC	2 cut(s)	361, 388
SaqAI	TTAA	3 cut(s)	99, 495, 576
SatI	GCNGC	4 cut(s)	14, 125, 201, 379
Sau3AI	GATC	2 cut(s)	307, 481
Sau96I	GGNCC	1 cut(s)	109
SchI	GAGTC	1 cut(s)	451
ScrFI	CCNGG	3 cut(s)	95, 370, 413
SduI	GDGCHC	2 cut(s)	9, 354
SfaNI	GCATC	1 cut(s)	313
SfcI	CTRYAG	1 cut(s)	406
SmlI	CTYRAG	2 cut(s)	8, 341
SmoI	CTYRAG	2 cut(s)	8, 341
Sse9I	AATT	2 cut(s)	556, 573
SseBI	AGGCCT	1 cut(s)	526
SspI	AATATT	1 cut(s)	103
SspMI	CTAG	1 cut(s)	522
StuI	AGGCCT	1 cut(s)	526
StyD4I	CCNGG	3 cut(s)	93, 368, 411
StyI	CCWWGG	1 cut(s)	461
TaaI	ACNGT	1 cut(s)	316
TaiI	ACGT	1 cut(s)	186
TaqI	TCGA	4 cut(s)	78, 84, 321, 354
TasI	AATT	2 cut(s)	556, 573
TfiI	GAWTC	3 cut(s)	145, 160, 230
Tru1I	TTAA	3 cut(s)	99, 495, 576
Tru9I	TTAA	3 cut(s)	99, 495, 576
TseFI	GTSAC	2 cut(s)	179, 184
TseI	GCWGC	4 cut(s)	13, 124, 200, 378
Tsp45I	GTSAC	2 cut(s)	179, 184
TspDTI	ATGAA	5 cut(s)	81, 439, 459, 467, 569
XapI	RAATTY	1 cut(s)	556
XceI	RCATGY	1 cut(s)	361
XspI	CTAG	1 cut(s)	522
ZraI	GACGTC	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.