Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004737

Physical Location & Seq

Genomic Coordinates Forward (+)

21880955 .. 21882133

Gene Structure 1179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G256600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 663 bp

ATGGTGCTCAAGCTGCATGGATTTCCTGTATCTCCCAGCACGGCTCGCGTAGAGGCTTGTCTCCATGAAAAAGCTCTCGACTTCGAGTTCGTCCCGGTTAATATTTTGGGCCTTGAAAACAAGCAGCCTTCTTTTCTTGCCAAGAATCCCTTTGGCCAGATTCCAGCATTTGAAGATGGTGACGTCACACTATTTGAGTCCAGAGCAATCACAGCATATGTAGCTGAAAAATTCAAGGAAACTGGATATGATCTCATTAGGCACGAAAACTTGAAAGAAGCTGCATTGGTGAAGGTATGGATAGAAGTGGAATCTCAACAATACCACCCAGCAATCTGCCCCATTGTGTATGAGTTTTTCGGGAAGCCTGTGGTGGGCTGTAAGCCCGATCAAACAGTAATCGATGCGAGCTTAGAGAAGCTCAAGAAGGTGCTCGACGTGTACGAGACCAGGCTGAGCAGCAACAAGTACCTTGCTGGTGATTTCTATAGCCTGGCTGACCTTCACCACTTCGCTTACACTTTTTATTTCATGAAGACTCCTTGGTCTTCATTGATAAACGATCGTCCTCATGTTAAGGCGTGGTGGGAGGAAATTTCAGCTAGGCCTGCCTCTGTCAAAGTGGCTGAGGGCATGAATTTTGGTGAAGTTGAAATTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009635 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0032991 GO:0034641 GO:0042221 GO:0042802 GO:0042803 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0046983 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N GST_N_3

Protein Analysis

221

Amino Acids

25.02

Weight (kDa)

5.67

Isoelectric Point (pI)

38.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62760
fragaria_vesca	FvH4_2g25180 FvH4_2g25180 FvH4_5g24660
malus_domestica	MD03G1283000.v1.1 MD06G1012200.v1.1 MD11G1303600.v1.1
prunus_persica	Prupe.5G014900_v2.0.a1 Prupe.8G256600_v2.0.a1 Prupe.8G260300_v2.0.a1
pyrus_communis	pycom06g01020
rosa_chinensis	RchiOBHm_Chr6g0293301 RchiOBHm_Chr7g0215041
rosa_laevigata	RLG00000002697 RLG00000011960
rosa_multiflora	Rmu_ssc0000134.1_g000067 Rmu_ssc0000162.1_g000037
rosa_roxburghii	Rroxscaffold_3G00244640 Rroxscaffold_7G00174270
rosa_rugosa	Rorug06G0234400 Rorug07G0149700
rosa_samantha	Rh6AG347200 Rh6BG354500 Rh6CG361000 Rh6DG347600 Rh7AG286700 Rh7BG278200 Rh7CG306100 Rh7DG290200
rosa_wichuraiana	Rw6G030220 Rw7G024450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	544
AatII	GACGTC	1 cut(s)	186
AccII	CGCG	1 cut(s)	48
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	3 cut(s)	230, 594, 637
AcyI	GRCGYC	1 cut(s)	183
AfaI	GTAC	2 cut(s)	443, 470
AfiI	CCNNNNNNNGG	1 cut(s)	374
AflIII	ACRYGT	1 cut(s)	438
AgsI	TTSAA	5 cut(s)	116, 173, 235, 274, 653
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	2 cut(s)	449, 492
AluBI	AGCT	7 cut(s)	13, 74, 224, 281, 411, 421, 602
AluI	AGCT	7 cut(s)	13, 74, 224, 281, 411, 421, 602
Alw21I	GWGCWC	2 cut(s)	9, 435
Alw26I	GTCTC	2 cut(s)	65, 440
AoxI	GGCC	3 cut(s)	109, 154, 605
ApeKI	GCWGC	4 cut(s)	13, 124, 281, 459
ApoI	RAATTY	3 cut(s)	230, 594, 637
ArsI	GACNNNNNNTTYG	2 cut(s)	71, 103
AspS9I	GGNCC	1 cut(s)	109
AsuC2I	CCSGG	1 cut(s)	95
AsuHPI	GGTGA	5 cut(s)	191, 301, 491, 497, 656
BalI	TGGCCA	1 cut(s)	156
BbsI	GAAGAC	2 cut(s)	540, 542
Bbv12I	GWGCWC	2 cut(s)	9, 435
BbvCI	CCTCAGC	1 cut(s)	627
BbvI	GCAGC	3 cut(s)	136, 268, 471
BccI	CCATC	1 cut(s)	170
BceAI	ACGGC	1 cut(s)	57
BciT130I	CCWGG	2 cut(s)	451, 494
BcnI	CCSGG	1 cut(s)	95
BcoDI	GTCTC	2 cut(s)	65, 440
BfaI	CTAG	1 cut(s)	603
BfmI	CTRYAG	1 cut(s)	487
BisI	GCNGC	4 cut(s)	14, 125, 282, 460
BlpI	GCTNAGC	1 cut(s)	455
BlsI	GCNGC	4 cut(s)	15, 126, 283, 461
Bme1390I	CCNGG	3 cut(s)	95, 451, 494
BmgBI	CACGTC	1 cut(s)	439
BmgT120I	GGNCC	1 cut(s)	109
BmrFI	CCNGG	3 cut(s)	95, 451, 494
BmsI	GCATC	1 cut(s)	394
BpiI	GAAGAC	2 cut(s)	540, 542
Bpu10I	CCTNAGC	1 cut(s)	627
Bpu1102I	GCTNAGC	1 cut(s)	455
BpuEI	CTTGAG	1 cut(s)	407
BpuMI	CCSGG	1 cut(s)	95
Bsa29I	ATCGAT	1 cut(s)	402
BsaHI	GRCGYC	1 cut(s)	183
BsaI	GGTCTC	1 cut(s)	440
BsaJI	CCNNGG	1 cut(s)	542
Bsc4I	CCNNNNNNNGG	1 cut(s)	374
Bse1I	ACTGG	1 cut(s)	247
BseBI	CCWGG	2 cut(s)	451, 494
BseCI	ATCGAT	1 cut(s)	402
BseDI	CCNNGG	1 cut(s)	542
BseLI	CCNNNNNNNGG	1 cut(s)	374
BseMII	CTCAG	2 cut(s)	446, 618
BseNI	ACTGG	1 cut(s)	247
BseXI	GCAGC	3 cut(s)	136, 268, 471
BseYI	CCCAGC	2 cut(s)	35, 328
Bsh1236I	CGCG	1 cut(s)	48
Bsh1285I	CGRYCG	1 cut(s)	565
BshFI	GGCC	3 cut(s)	111, 156, 607
BshVI	ATCGAT	1 cut(s)	402
BsiEI	CGRYCG	1 cut(s)	565
BsiHKAI	GWGCWC	2 cut(s)	9, 435
BsiSI	CCGG	1 cut(s)	95
BslFI	GGGAC	1 cut(s)	77
BslI	CCNNNNNNNGG	1 cut(s)	374
BsmAI	GTCTC	2 cut(s)	65, 440
BsmFI	GGGAC	1 cut(s)	77
BsnI	GGCC	3 cut(s)	111, 156, 607
Bso31I	GGTCTC	1 cut(s)	440
Bsp1286I	GDGCHC	2 cut(s)	9, 435
Bsp143I	GATC	3 cut(s)	250, 388, 562
Bsp1720I	GCTNAGC	1 cut(s)	455
BspANI	GGCC	3 cut(s)	111, 156, 607
BspCNI	CTCAG	2 cut(s)	447, 619
BspDI	ATCGAT	1 cut(s)	402
BspFNI	CGCG	1 cut(s)	48
BspHI	TCATGA	1 cut(s)	531
BspTNI	GGTCTC	1 cut(s)	440
BsrI	ACTGG	1 cut(s)	247
BssECI	CCNNGG	1 cut(s)	542
BssMI	GATC	3 cut(s)	250, 388, 562
BssNI	GRCGYC	1 cut(s)	183
BssT1I	CCWWGG	1 cut(s)	542
Bst2UI	CCWGG	2 cut(s)	451, 494
Bst4CI	ACNGT	1 cut(s)	397
BstACI	GRCGYC	1 cut(s)	183
BstC8I	GCNNGC	3 cut(s)	46, 409, 609
BstDEI	CTNAG	3 cut(s)	412, 455, 627
BstFNI	CGCG	1 cut(s)	48
BstKTI	GATC	3 cut(s)	253, 391, 565
BstMAI	GTCTC	2 cut(s)	65, 440
BstMBI	GATC	3 cut(s)	250, 388, 562
BstMCI	CGRYCG	1 cut(s)	565
BstMWI	GCNNNNNNNGC	5 cut(s)	13, 45, 212, 221, 608
BstNI	CCWGG	2 cut(s)	451, 494
BstSCI	CCNGG	3 cut(s)	93, 449, 492
BstSFI	CTRYAG	1 cut(s)	487
BstUI	CGCG	1 cut(s)	48
BstV1I	GCAGC	3 cut(s)	136, 268, 471
BstV2I	GAAGAC	2 cut(s)	540, 542
Bsu15I	ATCGAT	1 cut(s)	402
BsuRI	GGCC	3 cut(s)	111, 156, 607
BsuTUI	ATCGAT	1 cut(s)	402
BtrI	CACGTC	1 cut(s)	439
Cac8I	GCNNGC	3 cut(s)	46, 409, 609
CciI	TCATGA	1 cut(s)	531
Cfr13I	GGNCC	1 cut(s)	109
ClaI	ATCGAT	1 cut(s)	402
Csp6I	GTAC	2 cut(s)	442, 469
CviAII	CATG	5 cut(s)	17, 65, 532, 572, 634
CviQI	GTAC	2 cut(s)	442, 469
DdeI	CTNAG	3 cut(s)	412, 455, 627
DpnI	GATC	3 cut(s)	252, 390, 564
DpnII	GATC	3 cut(s)	250, 388, 562
DrdI	GACNNNNNNGTC	1 cut(s)	544
DseDI	GACNNNNNNGTC	1 cut(s)	544
EaeI	YGGCCR	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	542
Eco147I	AGGCCT	1 cut(s)	607
Eco31I	GGTCTC	1 cut(s)	440
EcoRII	CCWGG	2 cut(s)	449, 492
EcoT14I	CCWWGG	1 cut(s)	542
ErhI	CCWWGG	1 cut(s)	542
FaeI	CATG	5 cut(s)	20, 68, 535, 575, 637
FalI	AAGNNNNNCTT	2 cut(s)	134, 166
FaqI	GGGAC	1 cut(s)	77
FatI	CATG	5 cut(s)	16, 64, 531, 571, 633
FauNDI	CATATG	1 cut(s)	217
Fnu4HI	GCNGC	4 cut(s)	14, 125, 282, 460
Fsp4HI	GCNGC	4 cut(s)	14, 125, 282, 460
FspBI	CTAG	1 cut(s)	603
GluI	GCNGC	4 cut(s)	14, 125, 282, 460
GsaI	CCCAGC	2 cut(s)	39, 332
HaeIII	GGCC	3 cut(s)	111, 156, 607
HapII	CCGG	1 cut(s)	95
Hin1I	GRCGYC	1 cut(s)	183
Hin1II	CATG	5 cut(s)	20, 68, 535, 575, 637
HinfI	GANTC	5 cut(s)	145, 160, 197, 311, 538
HpaII	CCGG	1 cut(s)	95
HphI	GGTGA	5 cut(s)	191, 301, 491, 497, 656
Hpy166II	GTNNAC	1 cut(s)	442
Hpy188III	TCNNGA	5 cut(s)	77, 201, 361, 424, 532
Hpy8I	GTNNAC	1 cut(s)	442
Hpy99I	CGWCG	1 cut(s)	440
HpyAV	CCTTC	4 cut(s)	138, 286, 421, 512
HpyCH4III	ACNGT	1 cut(s)	397
HpyCH4IV	ACGT	2 cut(s)	183, 438
HpyCH4V	TGCA	2 cut(s)	16, 284
HpyF10VI	GCNNNNNNNGC	5 cut(s)	13, 45, 212, 221, 608
HpyF3I	CTNAG	3 cut(s)	412, 455, 627
HpySE526I	ACGT	2 cut(s)	183, 438
Hsp92I	GRCGYC	1 cut(s)	183
Hsp92II	CATG	5 cut(s)	20, 68, 535, 575, 637
Kzo9I	GATC	3 cut(s)	250, 388, 562
Lsp1109I	GCAGC	3 cut(s)	136, 268, 471
LweI	GCATC	1 cut(s)	394
MaeI	CTAG	1 cut(s)	603
MaeII	ACGT	2 cut(s)	183, 438
MaeIII	GTNAC	2 cut(s)	179, 184
MalI	GATC	3 cut(s)	252, 390, 564
MboI	GATC	3 cut(s)	250, 388, 562
MboII	GAAGA	3 cut(s)	185, 540, 547
MhlI	GDGCHC	2 cut(s)	9, 435
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	4 cut(s)	230, 594, 637, 654
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	2 cut(s)	206, 532
MnlI	CCTC	5 cut(s)	46, 579, 583, 622, 622
Mox20I	TGGCCA	1 cut(s)	156
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	3 cut(s)	99, 576, 657
Msp20I	TGGCCA	1 cut(s)	156
MspI	CCGG	1 cut(s)	95
MspR9I	CCNGG	3 cut(s)	95, 451, 494
MvaI	CCWGG	2 cut(s)	451, 494
MvnI	CGCG	1 cut(s)	48
MwoI	GCNNNNNNNGC	5 cut(s)	13, 45, 212, 221, 608
NciI	CCSGG	1 cut(s)	95
NdeI	CATATG	1 cut(s)	217
NdeII	GATC	3 cut(s)	250, 388, 562
NlaIII	CATG	5 cut(s)	20, 68, 535, 575, 637
NmuCI	GTSAC	2 cut(s)	179, 184
PagI	TCATGA	1 cut(s)	531
PceI	AGGCCT	1 cut(s)	607
PcsI	WCGNNNNNNNCGW	1 cut(s)	441
PfeI	GAWTC	3 cut(s)	145, 160, 311
PkrI	GCNGC	4 cut(s)	15, 126, 283, 461
Ple19I	CGATCG	1 cut(s)	565
PleI	GAGTC	2 cut(s)	205, 532
PpsI	GAGTC	2 cut(s)	205, 532
Psp6I	CCWGG	2 cut(s)	449, 492
PspFI	CCCAGC	2 cut(s)	35, 328
PspGI	CCWGG	2 cut(s)	449, 492
PspPI	GGNCC	1 cut(s)	109
PvuI	CGATCG	1 cut(s)	565
RsaI	GTAC	2 cut(s)	443, 470
RsaNI	GTAC	2 cut(s)	442, 469
SaqAI	TTAA	3 cut(s)	99, 576, 657
SatI	GCNGC	4 cut(s)	14, 125, 282, 460
Sau3AI	GATC	3 cut(s)	250, 388, 562
Sau96I	GGNCC	1 cut(s)	109
SchI	GAGTC	2 cut(s)	206, 532
ScrFI	CCNGG	3 cut(s)	95, 451, 494
SduI	GDGCHC	2 cut(s)	9, 435
SfaNI	GCATC	1 cut(s)	394
SfcI	CTRYAG	1 cut(s)	487
SmlI	CTYRAG	2 cut(s)	8, 422
SmoI	CTYRAG	2 cut(s)	8, 422
Sse9I	AATT	4 cut(s)	230, 594, 637, 654
SseBI	AGGCCT	1 cut(s)	607
SspI	AATATT	1 cut(s)	103
SspMI	CTAG	1 cut(s)	603
StuI	AGGCCT	1 cut(s)	607
StyD4I	CCNGG	3 cut(s)	93, 449, 492
StyI	CCWWGG	1 cut(s)	542
TaaI	ACNGT	1 cut(s)	397
TaiI	ACGT	2 cut(s)	186, 441
TaqI	TCGA	4 cut(s)	78, 84, 402, 435
TasI	AATT	4 cut(s)	230, 594, 637, 654
TfiI	GAWTC	3 cut(s)	145, 160, 311
Tru1I	TTAA	3 cut(s)	99, 576, 657
Tru9I	TTAA	3 cut(s)	99, 576, 657
TseFI	GTSAC	2 cut(s)	179, 184
TseI	GCWGC	4 cut(s)	13, 124, 281, 459
Tsp45I	GTSAC	2 cut(s)	179, 184
TspDTI	ATGAA	5 cut(s)	81, 520, 540, 548, 650
XapI	RAATTY	3 cut(s)	230, 594, 637
XspI	CTAG	1 cut(s)	603
ZraI	GACGTC	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.