Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004701

Physical Location & Seq

Genomic Coordinates Forward (+)

2083394 .. 2087793

Gene Structure 4400 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G66652.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2994 bp

ATGGATTCTACTGATGATGATTTCGGTGACTTGTACGTTGATGATGCCAAGTTTCAGGCGACTGATGCTTTCGAATCGGAGTGTGCTACGAACTCCGGCGAGGATAAGGGTTTTGAAGAGACGGTAAAGTCTGATTCGGAAGGTGAAGTGAAGAAATTTGATGTTGTTGCTAAGGATTCGAGTCCGTGTGACGACGACGATTGTGCTATGAATCTGACTGAGGCCGATGAAGAATCGGAATTTAGTGATAGTGATGATGATTTGAATATAGTGCTCAAAGACGACGACTCTAAAGCCCTTCCTGCTTCTTGTGTGTTTAACACCAACTTTGGCGGATACGAAGCATCCAAAGCTTCCTCGTTTCAGAGACGGTGGACTAGAAACGCTTCAGCTAATAATGCTTGCATCGATCCTTCTTTAGGAATGTCTCAATACAGATATAGTTTCCCAAACCCTTGGTCCAGGACACCTTTTGATGTAAATCTCGATGTGTTAGAGAAGAAGCCATGGAGGGATCCTGGTACGGATACCAGTGACTTTTTTAATTTTGGGCTTAACGAGCAGAGCTGGAAAGATTACTGTAAACCGTTGGGAAGAGCAATTGAGGTTAGAGGTGGTACTCTTGAGCGAATACCTTCTGCAGATTTGCGTCGTCCACGTGATCCTGACCCTGGCGTGGTGATACAGATCCCAGTTACTAATGATGTTGAGGAGCTACCAGTCAGGACACCTGAGAAAGCAAGATGCATAACATCAAATGAAGCATCTAGAAGTGACGTTTCTCATTCATATGGTAGCAAGGATTTGAATTCAGTCTATGGTTCTCCAAAAGATGAAGCTTTTGTGGGGTGTCAAGAAGAAAACGCTGGAAGTTTCAGTGGCGAGAAATCTCTTCCAACAGAGAATTGCTGCAGTAGGGAAGCAACACCTAGTGATAAGGAAATGCTTGAGAAGGAGAAAGAAGAGAGTGTTTGCAATTCTGATGAGACGGATCCATCCTCAGTGGAGAGGGAATCATCTCTTGGAGATCGCATTCGTTTGAGCCCTACCTCTTCTTCTTCTGTTGGTATAAATGAGGAATCTGATGATTATGAAACAGAGTCATTGAAAGACAGTGCTACTGATGACCAACGTGAAGTCAGTACCCCACCACAAGAAGCTAGACTTGCAGAACATGAAGCAATTAGTATCAAAAGAGGGGAAGATAGTGGTACAATGCATTCTAGACACAGAAGATCTCACGAAGACTCCAGCAAAAGGCACTGTGGGAGAGCTGGTTATGCTCGCTATGTTAAGGATGCATCGCCTACACCAGATCCTGGTCGTGGGAAGAAAGTTGGTTCTCTACAGGGCTTGTATCGTGATTCAAACAAAAACTGGCAGAATGGACCACCTATTACATTAGAGAGGGATGAAACTGAAGGTAAAGGCGTTCATTACTATAGAGAAAAATCTCATGGTAGATTGAATTCATCTGTGGATCATGATAGGCATAGAGAGCACAGGTTTGGTTGGCGGAACAACAAAGAATCATCACTCGGTCGAGGTTTTGATCATTCTAATAGTTACAAGTGTGGGACGCATCTTAAAGAGTATACCTCACGTTCATCCTTCGATCTTAATCAGAGAAATTCTAGATCAAGTTTTAAAGAAGAGGATGATCGATATGGTTGGCATCATCGTGAAAGAAAATATGTTCATGAAAGAAGTCCTATCCGAGCATATGAAAACTACAAAGAAAGAAATGGGTGTGATTGGCTAAGAGAACCTTATTATGAGGACTGTATACCGATTACTGACATGGATTATAGGTACCGGTCAGAGAACTCGTCTGCACATGCAATACACAACCTCAAGCACAGTCCAGAGAATGATCTTTATTGCAGAAGAAGGGGTGGATACGATTATAATTTGCATCGTGATAGATATGAAGATGGAGTTCACAGGGTAGAAAGTAGAATTCCATTTGAGCTGGCGTACAGGGAGATGCGTTCTTTTGCTGAAGTGGAAATGAGAGAATATCAAGGGTATAAAAGACATGAGGAATTCTCTGAAATAGAGAAAAGACATCATTACATTCATGATTGGCATCTTGATAGATTTGTCTCAGAGGAAGATGGTTATAAGTATAGAATCCAAGATGGTTGGTCCTCACCGTCTTTATCTTTGAGAGATTCTTGGTATACCAAAGAAGCAAAAGGTGATTTCCGGAGAGATGATACCAGAGACTTCAGAACACCTGAAGCATATGACAGCCAGAATAACCATTTTCATAAGGCTGCACCGAGAGATGGCTGGACGCAGAATCTTGGTCGTAGCCATAATGTGAGCGTAAAAGATAGACTACAGTATGATGCTGATTGGGTTGGTCCTGATAGAGGAAGATATAATATGGCAGATGACATGCAATGTTCAATGAGAGAAGTTTCTAATTCTGAGCATCCATCATATACTGATGAGATATTTGTCCGCGACATAAGAGTACCGACACATAATCGGATGGCGACCAAACAAAGGTTTGGATATTTACAGAGCCATATTCATGAAAATGATGAAAGACATCACAGATCCAAGAAGCTGAGAGGAGATGGGCATGCTTTCATCAAGCGTCAGGATCATGTTGACTTAGCTGGTAGGCAAGGAAAGGTCTCTAACCAATCAAAAAAAAGATTCTCCAATGGCGGAGATACAATCGAGCAACAAGATGTTCAGAAACCAAGAAAGTTAATGGGCAAAAGCGAAGAGAAAGCTATGCAGAATCGAGATATAAATGACAAAGAAGAAGGCGAGATAATAGAAGAAGTGAAAGGTGTTGAAATAGACAATGAACGTATACAAGAGAGTCTGAAAAAGATGGAGAAACGGAGGGAGAGGTTCAAGGGAACCAAATTGGCGGTAGAAGCGACATTCAAATCTCAAACTGAACTGAGAGCTAAAGCCGATGTTACTAATCAACAGAGGCCAGTTAGAAAGAGGAGATGGTGTGCAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098787 GO:0098789 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 ko03015 map00906 map01100 map01110 map03015

Pfam Domains

Protein Families

Fip1

Protein Analysis

997

Amino Acids

115.37

Weight (kDa)

5.68

Isoelectric Point (pI)

52.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fip1	PF05182	159 - 196	4.6e-19	Fip1 motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G66652 AT3G66652 AT3G66652
fragaria_vesca	FvH4_4g19650 FvH4_4g19650 FvH4_4g19650 FvH4_4g19650 FvH4_4g19650 FvH4_4g19650
malus_domestica	MD13G1154900.v1.1 MD16G1154500.v1.1
prunus_persica	Prupe.1G117900_v2.0.a1
pyrus_communis	pycom13g13170 pycom16g13090
rosa_chinensis	RchiOBHm_Chr4g0425101
rosa_laevigata	RLG00000007403 RLG00000007404 RLG00000007405 RLG00000007407
rosa_multiflora	Rmu_ssc0000420.1_g000015 Rmu_ssc0000420.1_g000026
rosa_roxburghii	Rroxscaffold_5G00367170
rosa_rugosa	Rorug04G0200900 Rorug04G0201400 Rorug04G0201400 Rorug04G0201500
rosa_samantha	Rh4AG258200 Rh4BG263800 Rh4CG274900 Rh4DG259700
rosa_wichuraiana	Rw4G022320

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1908, 2124
AasI	GACNNNNNNGTC	1 cut(s)	127
Acc65I	GGTACC	1 cut(s)	1812
AccB1I	GGYRCC	1 cut(s)	1812
AccB7I	CCANNNNNTGG	1 cut(s)	1319
AccI	GTMKAC	4 cut(s)	1595, 1786, 2183, 2833
AccII	CGCG	1 cut(s)	2472
AccIII	TCCGGA	1 cut(s)	2208
AciI	CCGC	5 cut(s)	333, 1516, 2470, 2682, 2894
AcsI	RAATTY	7 cut(s)	155, 239, 808, 1468, 1630, 1959, 2045
AcuI	CTGAAG	5 cut(s)	372, 1440, 2022, 2215, 2262
AcvI	CACGTG	1 cut(s)	659
AdeI	CACNNNGTG	1 cut(s)	932
AfaI	GTAC	8 cut(s)	35, 523, 619, 1144, 1213, 1814, 1979, 2484
AfiI	CCNNNNNNNGG	9 cut(s)	419, 671, 676, 1257, 1319, 1325, 2291, 2378, 2514
AgeI	ACCGGT	1 cut(s)	1815
AjnI	CCWGG	4 cut(s)	461, 517, 670, 1318
AjuI	GAANNNNNNNTTGG	2 cut(s)	1005, 1037
Alw21I	GWGCWC	2 cut(s)	276, 1503
Alw26I	GTCTC	7 cut(s)	113, 361, 432, 980, 2110, 2220, 2653
AlwNI	CAGNNNCTG	1 cut(s)	1319
Aor13HI	TCCGGA	1 cut(s)	2208
AoxI	GGCC	2 cut(s)	222, 2960
ApeKI	GCWGC	2 cut(s)	909, 2279
ApoI	RAATTY	7 cut(s)	155, 239, 808, 1468, 1630, 1959, 2045
ArsI	GACNNNNNNTTYG	2 cut(s)	443, 475
AsiGI	ACCGGT	1 cut(s)	1815
Asp700I	GAANNNNTTC	2 cut(s)	385, 634
Asp718I	GGTACC	1 cut(s)	1812
AspS9I	GGNCC	4 cut(s)	459, 1388, 2148, 2369
AsuHPI	GGTGA	5 cut(s)	38, 155, 691, 2145, 2213
AsuII	TTCGAA	1 cut(s)	72
AvaII	GGWCC	4 cut(s)	459, 1388, 2148, 2369
BamHI	GGATCC	2 cut(s)	514, 991
BanI	GGYRCC	1 cut(s)	1812
BanII	GRGCYC	1 cut(s)	1046
BbrPI	CACGTG	1 cut(s)	659
BbsI	GAAGAC	1 cut(s)	1251
Bbv12I	GWGCWC	2 cut(s)	276, 1503
BbvI	GCAGC	2 cut(s)	896, 2266
BcgI	CGANNNNNNTGC	2 cut(s)	185, 219
BciT130I	CCWGG	4 cut(s)	463, 519, 672, 1320
BciVI	GTATCC	3 cut(s)	329, 520, 1892
BclI	TGATCA	1 cut(s)	1552
BcoDI	GTCTC	7 cut(s)	113, 361, 432, 980, 2110, 2220, 2653
BfaI	CTAG	6 cut(s)	378, 768, 930, 1161, 1224, 1635
BfmI	CTRYAG	5 cut(s)	639, 910, 1346, 1441, 2345
BfuI	GTATCC	3 cut(s)	329, 520, 1892
BglII	AGATCT	1 cut(s)	1235
BisI	GCNGC	2 cut(s)	910, 2280
BlsI	GCNGC	2 cut(s)	911, 2281
Bme1390I	CCNGG	4 cut(s)	463, 519, 672, 1320
Bme18I	GGWCC	4 cut(s)	459, 1388, 2148, 2369
BmgT120I	GGNCC	4 cut(s)	459, 1388, 2148, 2369
BmiI	GGNNCC	4 cut(s)	516, 993, 1814, 2884
BmrFI	CCNGG	4 cut(s)	463, 519, 672, 1320
BmrI	ACTGGG	1 cut(s)	686
BmuI	ACTGGG	1 cut(s)	686
BpiI	GAAGAC	1 cut(s)	1251
BplI	GAGNNNNNCTC	4 cut(s)	1583, 1615, 2033, 2065
BpmI	CTGGAG	1 cut(s)	1234
Bpu10I	CCTNAGC	1 cut(s)	171
Bpu14I	TTCGAA	1 cut(s)	72
BpuEI	CTTGAG	3 cut(s)	644, 968, 1838
Bsa29I	ATCGAT	2 cut(s)	408, 1663
BsaAI	YACGTR	1 cut(s)	659
BsaBI	GATNNNNATC	4 cut(s)	480, 686, 1620, 2088
BsaI	GGTCTC	1 cut(s)	2653
BsaJI	CCNNGG	3 cut(s)	455, 506, 670
BsaWI	WCCGGW	2 cut(s)	1815, 2208
BsaXI	ACNNNNNCTCC	5 cut(s)	1232, 1261, 1262, 1291, 2968
Bsc4I	CCNNNNNNNGG	9 cut(s)	419, 671, 676, 1257, 1319, 1325, 2291, 2378, 2514
Bse118I	RCCGGY	1 cut(s)	1815
Bse1I	ACTGG	5 cut(s)	531, 692, 719, 1382, 2963
Bse3DI	GCAATG	1 cut(s)	2414
Bse8I	GATNNNNATC	4 cut(s)	480, 686, 1620, 2088
BseAI	TCCGGA	1 cut(s)	2208
BseBI	CCWGG	4 cut(s)	463, 519, 672, 1320
BseCI	ATCGAT	2 cut(s)	408, 1663
BseDI	CCNNGG	3 cut(s)	455, 506, 670
BseGI	GGATG	8 cut(s)	344, 995, 1303, 1417, 1607, 1663, 2440, 2505
BseJI	GATNNNNATC	4 cut(s)	480, 686, 1620, 2088
BseLI	CCNNNNNNNGG	9 cut(s)	419, 671, 676, 1257, 1319, 1325, 2291, 2378, 2514
BseMI	GCAATG	1 cut(s)	2414
BseMII	CTCAG	7 cut(s)	210, 723, 1014, 2121, 2427, 2570, 2918
BseNI	ACTGG	5 cut(s)	531, 692, 719, 1382, 2963
BseRI	GAGGAG	3 cut(s)	725, 2598, 2989
BseXI	GCAGC	2 cut(s)	896, 2266
BsgI	GTGCAG	2 cut(s)	1818, 2265
Bsh1236I	CGCG	1 cut(s)	2472
Bsh1285I	CGRYCG	1 cut(s)	1543
BshFI	GGCC	2 cut(s)	224, 2962
BshNI	GGYRCC	1 cut(s)	1812
BshTI	ACCGGT	1 cut(s)	1815
BshVI	ATCGAT	2 cut(s)	408, 1663
BsiEI	CGRYCG	1 cut(s)	1543
BsiHKAI	GWGCWC	2 cut(s)	276, 1503
BsiSI	CCGG	3 cut(s)	96, 1816, 2209
BslFI	GGGAC	1 cut(s)	1591
BslI	CCNNNNNNNGG	9 cut(s)	419, 671, 676, 1257, 1319, 1325, 2291, 2378, 2514
BsmAI	GTCTC	7 cut(s)	113, 361, 432, 980, 2110, 2220, 2653
BsmBI	CGTCTC	3 cut(s)	113, 361, 980
BsmFI	GGGAC	1 cut(s)	1591
BsmI	GAATGC	2 cut(s)	1032, 1219
BsnI	GGCC	2 cut(s)	224, 2962
Bso31I	GGTCTC	1 cut(s)	2653
Bsp119I	TTCGAA	1 cut(s)	72
Bsp1286I	GDGCHC	3 cut(s)	276, 1046, 1503
Bsp13I	TCCGGA	1 cut(s)	2208
Bsp19I	CCATGG	1 cut(s)	506
BspACI	CCGC	5 cut(s)	333, 1516, 2470, 2682, 2894
BspANI	GGCC	2 cut(s)	224, 2962
BspCNI	CTCAG	7 cut(s)	211, 724, 1013, 2120, 2428, 2571, 2919
BspDI	ATCGAT	2 cut(s)	408, 1663
BspEI	TCCGGA	1 cut(s)	2208
BspFNI	CGCG	1 cut(s)	2472
BspHI	TCATGA	4 cut(s)	1483, 1699, 2080, 2542
BspLI	GGNNCC	4 cut(s)	516, 993, 1814, 2884
BspMAI	CTGCAG	2 cut(s)	643, 914
BspQI	GCTCTTC	1 cut(s)	589
BspT104I	TTCGAA	1 cut(s)	72
BspT107I	GGYRCC	1 cut(s)	1812
BspTNI	GGTCTC	1 cut(s)	2653
BsrDI	GCAATG	1 cut(s)	2414
BsrFI	RCCGGY	1 cut(s)	1815
BsrI	ACTGG	5 cut(s)	531, 692, 719, 1382, 2963
BssAI	RCCGGY	1 cut(s)	1815
BssECI	CCNNGG	3 cut(s)	455, 506, 670
BssNAI	GTATAC	4 cut(s)	1596, 1787, 2184, 2834
BssT1I	CCWWGG	2 cut(s)	455, 506
Bst1107I	GTATAC	4 cut(s)	1596, 1787, 2184, 2834
Bst2UI	CCWGG	4 cut(s)	463, 519, 672, 1320
Bst6I	CTCTTC	7 cut(s)	111, 589, 897, 957, 1057, 1647, 2736
BstBAI	YACGTR	1 cut(s)	659
BstBI	TTCGAA	1 cut(s)	72
BstC8I	GCNNGC	4 cut(s)	403, 1285, 1974, 2595
BstDSI	CCRYGG	1 cut(s)	506
BstENI	CCTNNNNNAGG	2 cut(s)	417, 2376
BstF5I	GGATG	8 cut(s)	344, 995, 1303, 1417, 1607, 1663, 2440, 2505
BstFNI	CGCG	1 cut(s)	2472
BstMAI	GTCTC	7 cut(s)	113, 361, 432, 980, 2110, 2220, 2653
BstMCI	CGRYCG	1 cut(s)	1543
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 302, 350, 398, 559, 1166, 1280, 1498, 2900
BstNI	CCWGG	4 cut(s)	463, 519, 672, 1320
BstNSI	RCATGY	3 cut(s)	1841, 2407, 2597
BstSCI	CCNGG	4 cut(s)	461, 517, 670, 1318
BstSFI	CTRYAG	5 cut(s)	639, 910, 1346, 1441, 2345
BstUI	CGCG	1 cut(s)	2472
BstV1I	GCAGC	2 cut(s)	896, 2266
BstV2I	GAAGAC	1 cut(s)	1251
BstX2I	RGATCY	6 cut(s)	514, 687, 991, 1235, 1315, 2567
BstXI	CCANNNNNNTGG	1 cut(s)	456
BstYI	RGATCY	6 cut(s)	514, 687, 991, 1235, 1315, 2567
BstZ17I	GTATAC	4 cut(s)	1596, 1787, 2184, 2834
Bsu15I	ATCGAT	2 cut(s)	408, 1663
BsuI	GTATCC	3 cut(s)	329, 520, 1892
BsuRI	GGCC	2 cut(s)	224, 2962
BsuTUI	ATCGAT	2 cut(s)	408, 1663
BtgI	CCRYGG	1 cut(s)	506
BtgZI	GCGATG	1 cut(s)	1287
BtsCI	GGATG	8 cut(s)	344, 995, 1303, 1417, 1607, 1663, 2440, 2505
BtsIMutI	CAGTG	5 cut(s)	538, 883, 1008, 1120, 1261
Cac8I	GCNNGC	4 cut(s)	403, 1285, 1974, 2595
CaiI	CAGNNNCTG	1 cut(s)	1319
CciI	TCATGA	4 cut(s)	1483, 1699, 2080, 2542
Cfr10I	RCCGGY	1 cut(s)	1815
Cfr13I	GGNCC	4 cut(s)	459, 1388, 2148, 2369
ClaI	ATCGAT	2 cut(s)	408, 1663
CseI	GACGC	4 cut(s)	638, 1588, 2308, 2597
Csp6I	GTAC	8 cut(s)	34, 522, 618, 1143, 1212, 1813, 1978, 2483
CspAI	ACCGGT	1 cut(s)	1815
CviQI	GTAC	8 cut(s)	34, 522, 618, 1143, 1212, 1813, 1978, 2483
DraI	TTTAAA	1 cut(s)	1648
DraIII	CACNNNGTG	1 cut(s)	932
DrdI	GACNNNNNNGTC	1 cut(s)	127
DseDI	GACNNNNNNGTC	1 cut(s)	127
Eam1104I	CTCTTC	7 cut(s)	111, 589, 897, 957, 1057, 1647, 2736
EarI	CTCTTC	7 cut(s)	111, 589, 897, 957, 1057, 1647, 2736
EciI	GGCGGA	3 cut(s)	348, 1531, 2697
Eco130I	CCWWGG	2 cut(s)	455, 506
Eco24I	GRGCYC	1 cut(s)	1046
Eco31I	GGTCTC	1 cut(s)	2653
Eco47I	GGWCC	4 cut(s)	459, 1388, 2148, 2369
Eco57I	CTGAAG	5 cut(s)	372, 1440, 2022, 2215, 2262
Eco72I	CACGTG	1 cut(s)	659
EcoNI	CCTNNNNNAGG	2 cut(s)	417, 2376
EcoRI	GAATTC	4 cut(s)	808, 1468, 1959, 2045
EcoRII	CCWGG	4 cut(s)	461, 517, 670, 1318
EcoT14I	CCWWGG	2 cut(s)	455, 506
EcoT22I	ATGCAT	3 cut(s)	749, 1221, 1303
EcoT38I	GRGCYC	1 cut(s)	1046
ErhI	CCWWGG	2 cut(s)	455, 506
Esp3I	CGTCTC	3 cut(s)	113, 361, 980
FalI	AAGNNNNNCTT	4 cut(s)	1149, 1181, 1753, 1785
FaqI	GGGAC	1 cut(s)	1591
FauNDI	CATATG	3 cut(s)	790, 1723, 2248
FbaI	TGATCA	1 cut(s)	1552
FblI	GTMKAC	4 cut(s)	1595, 1786, 2183, 2833
Fnu4HI	GCNGC	2 cut(s)	910, 2280
FokI	GGATG	8 cut(s)	331, 982, 1310, 1424, 1594, 1670, 2427, 2512
FriOI	GRGCYC	1 cut(s)	1046
Fsp4HI	GCNGC	2 cut(s)	910, 2280
FspBI	CTAG	6 cut(s)	378, 768, 930, 1161, 1224, 1635
GluI	GCNGC	2 cut(s)	910, 2280
GsuI	CTGGAG	1 cut(s)	1234
HaeIII	GGCC	2 cut(s)	224, 2962
HapII	CCGG	3 cut(s)	96, 1816, 2209
HgaI	GACGC	4 cut(s)	638, 1588, 2308, 2597
HincII	GTYRAC	1 cut(s)	2623
HindII	GTYRAC	1 cut(s)	2623
HindIII	AAGCTT	2 cut(s)	351, 837
HpaII	CCGG	3 cut(s)	96, 1816, 2209
HphI	GGTGA	5 cut(s)	38, 155, 691, 2145, 2213
Hpy166II	GTNNAC	9 cut(s)	375, 584, 656, 1596, 1787, 1942, 2184, 2623, 2834
Hpy8I	GTNNAC	9 cut(s)	375, 584, 656, 1596, 1787, 1942, 2184, 2623, 2834
Hpy99I	CGWCG	4 cut(s)	197, 200, 287, 654
HpyAV	CCTTC	9 cut(s)	134, 308, 423, 645, 946, 1415, 1621, 1884, 2777
HpyCH4IV	ACGT	6 cut(s)	36, 658, 777, 1132, 1603, 2830
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 302, 350, 398, 559, 1166, 1280, 1498, 2900
HpySE526I	ACGT	6 cut(s)	36, 658, 777, 1132, 1603, 2830
Kpn2I	TCCGGA	1 cut(s)	2208
KpnI	GGTACC	1 cut(s)	1816
Ksp22I	TGATCA	1 cut(s)	1552
LguI	GCTCTTC	1 cut(s)	589
LmnI	GCTCC	1 cut(s)	712
Lsp1109I	GCAGC	2 cut(s)	896, 2266
MaeI	CTAG	6 cut(s)	378, 768, 930, 1161, 1224, 1635
MaeII	ACGT	6 cut(s)	36, 658, 777, 1132, 1603, 2830
MaeIII	GTNAC	7 cut(s)	26, 188, 533, 694, 773, 1565, 2944
MfeI	CAATTG	1 cut(s)	600
MflI	RGATCY	6 cut(s)	514, 687, 991, 1235, 1315, 2567
MhlI	GDGCHC	3 cut(s)	276, 1046, 1503
MlyI	GAGTC	5 cut(s)	190, 281, 1109, 1241, 2851
MmeI	TCCRAC	1 cut(s)	920
Mph1103I	ATGCAT	3 cut(s)	749, 1221, 1303
MroI	TCCGGA	1 cut(s)	2208
MroXI	GAANNNNTTC	2 cut(s)	385, 634
MseI	TTAA	9 cut(s)	318, 543, 555, 1293, 1587, 1620, 1647, 2726, 2992
MslI	CAYNNNNRTG	4 cut(s)	789, 1680, 2541, 2547
MspI	CCGG	3 cut(s)	96, 1816, 2209
MspR9I	CCNGG	4 cut(s)	463, 519, 672, 1320
MunI	CAATTG	1 cut(s)	600
Mva1269I	GAATGC	2 cut(s)	1032, 1219
MvaI	CCWGG	4 cut(s)	463, 519, 672, 1320
MvnI	CGCG	1 cut(s)	2472
MwoI	GCNNNNNNNGC	9 cut(s)	65, 302, 350, 398, 559, 1166, 1280, 1498, 2900
NcoI	CCATGG	1 cut(s)	506
NdeI	CATATG	3 cut(s)	790, 1723, 2248
NlaIV	GGNNCC	4 cut(s)	516, 993, 1814, 2884
NmuCI	GTSAC	4 cut(s)	26, 188, 533, 773
NsiI	ATGCAT	3 cut(s)	749, 1221, 1303
NspI	RCATGY	3 cut(s)	1841, 2407, 2597
NspV	TTCGAA	1 cut(s)	72
PaeI	GCATGC	1 cut(s)	2597
PagI	TCATGA	4 cut(s)	1483, 1699, 2080, 2542
PciSI	GCTCTTC	1 cut(s)	589
PctI	GAATGC	2 cut(s)	1032, 1219
PdmI	GAANNNNTTC	2 cut(s)	385, 634
PflMI	CCANNNNNTGG	1 cut(s)	1319
PfoI	TCCNGGA	1 cut(s)	461
PinAI	ACCGGT	1 cut(s)	1815
PkrI	GCNGC	2 cut(s)	911, 2281
PleI	GAGTC	5 cut(s)	189, 281, 1108, 1241, 2850
PmaCI	CACGTG	1 cut(s)	659
PmlI	CACGTG	1 cut(s)	659
PpsI	GAGTC	5 cut(s)	189, 281, 1108, 1241, 2850
Ppu21I	YACGTR	1 cut(s)	659
PsiI	TTATAA	2 cut(s)	1908, 2124
Psp6I	CCWGG	4 cut(s)	461, 517, 670, 1318
PspCI	CACGTG	1 cut(s)	659
PspGI	CCWGG	4 cut(s)	461, 517, 670, 1318
PspN4I	GGNNCC	4 cut(s)	516, 993, 1814, 2884
PspPI	GGNCC	4 cut(s)	459, 1388, 2148, 2369
PstI	CTGCAG	2 cut(s)	643, 914
PstNI	CAGNNNCTG	1 cut(s)	1319
PsuI	RGATCY	6 cut(s)	514, 687, 991, 1235, 1315, 2567
RsaI	GTAC	8 cut(s)	35, 523, 619, 1144, 1213, 1814, 1979, 2484
RsaNI	GTAC	8 cut(s)	34, 522, 618, 1143, 1212, 1813, 1978, 2483
RseI	CAYNNNNRTG	4 cut(s)	789, 1680, 2541, 2547
SapI	GCTCTTC	1 cut(s)	589
SaqAI	TTAA	9 cut(s)	318, 543, 555, 1293, 1587, 1620, 1647, 2726, 2992
SatI	GCNGC	2 cut(s)	910, 2280
Sau96I	GGNCC	4 cut(s)	459, 1388, 2148, 2369
SchI	GAGTC	5 cut(s)	190, 281, 1109, 1241, 2851
ScrFI	CCNGG	4 cut(s)	463, 519, 672, 1320
SduI	GDGCHC	3 cut(s)	276, 1046, 1503
SfcI	CTRYAG	5 cut(s)	639, 910, 1346, 1441, 2345
SfuI	TTCGAA	1 cut(s)	72
SinI	GGWCC	4 cut(s)	459, 1388, 2148, 2369
SmiMI	CAYNNNNRTG	4 cut(s)	789, 1680, 2541, 2547
SmlI	CTYRAG	3 cut(s)	623, 947, 1853
SmoI	CTYRAG	3 cut(s)	623, 947, 1853
SphI	GCATGC	1 cut(s)	2597
SsiI	CCGC	5 cut(s)	333, 1516, 2470, 2682, 2894
SspMI	CTAG	6 cut(s)	378, 768, 930, 1161, 1224, 1635
StyD4I	CCNGG	4 cut(s)	461, 517, 670, 1318
StyI	CCWWGG	2 cut(s)	455, 506
TaiI	ACGT	6 cut(s)	39, 661, 780, 1135, 1606, 2833
TaqI	TCGA	9 cut(s)	72, 179, 408, 486, 1543, 1614, 1663, 2694, 2761
TaqII	GACCGA	1 cut(s)	1529
Tru1I	TTAA	9 cut(s)	318, 543, 555, 1293, 1587, 1620, 1647, 2726, 2992
Tru9I	TTAA	9 cut(s)	318, 543, 555, 1293, 1587, 1620, 1647, 2726, 2992
TscAI	CASTG	5 cut(s)	538, 883, 1008, 1120, 1268
TseFI	GTSAC	4 cut(s)	26, 188, 533, 773
TseI	GCWGC	2 cut(s)	909, 2279
Tsp45I	GTSAC	4 cut(s)	26, 188, 533, 773
TspGWI	ACGGA	4 cut(s)	174, 539, 1004, 2878
TspRI	CASTG	5 cut(s)	538, 883, 1008, 1120, 1268
Van91I	CCANNNNNTGG	1 cut(s)	1319
VpaK11BI	GGWCC	4 cut(s)	459, 1388, 2148, 2369
XagI	CCTNNNNNAGG	2 cut(s)	417, 2376
XapI	RAATTY	7 cut(s)	155, 239, 808, 1468, 1630, 1959, 2045
XbaI	TCTAGA	3 cut(s)	767, 1223, 1634
XceI	RCATGY	3 cut(s)	1841, 2407, 2597
XmiI	GTMKAC	4 cut(s)	1595, 1786, 2183, 2833
XmnI	GAANNNNTTC	2 cut(s)	385, 634
XspI	CTAG	6 cut(s)	378, 768, 930, 1161, 1224, 1635
Zsp2I	ATGCAT	3 cut(s)	749, 1221, 1303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.