MD13G1154900.v1.1

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0004701
Physical Location & Seq
Reverse (-)
12073701 .. 12080001
6301 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1154900.v1.1.491

Sequence Viewer

Length: 3402 bp
ATGGAGGATTTCGACGATGATTTCGGGGATTTGTATGCAGGCGTTGAAGCGCAGGCCAGTTTGGCCATCAATGGCGTAGCAGACTTCGCTCACTTTTACACAGAAGATGTAAGTGATGATAATGGAAAGGCGAAAAACGCTAGTCCTGGCTCCGATTCGAAGAAGCCCGATTCTGTCTGCGAGGAGTTGGGTGAGAAAGTTTCGGCTTTGGAGGAGGATGAGGACTTCAATGGAAGTGATAGCGAGGATGACCTGAAAATAGTGCTGAATGATGAGGACTGTGAGGGCAAAGTGTTTCCAAATGGCGGCCGAGGGAGAGTGAAGAATGATGAGCATGAGGATGAGGGTGATGATGGTTTTCCGCCTACGAAAGAGTATAAGTACCATGATAATAGTATGTGCTATCAACACAAGGGGTCGAGCTCTCAGATTAGTGGTATTCGTGATCCCCCTAATCGAATGGTGGCTCAAAATAGATATGGTTTCAGACTTCCTTGGTATAGGACCATACTTGATGTAAACATTGAATCATTTGAGGAGAAGCCATGGAAGTATCCTGGAGTTGATGTAACAGATTATTTCAATTTCGGTTTGAACGAGGACTGTTGGAAACAGTACTGCATCTCCCTGGAACAACTATGGCTAACATCTATGCAGTTTGGGATCCCTGTCTCAAAAGCGTCAAAATTTTATCAGGCTAAAGAAGCTGGATCTGCGTATGAGAAATTCTCCCAGGAAACTATTTATAAAGAAACGAACAATGCTGGACCAACAAAGTTTGCTCCGCCTCCATCTAGAGATTCTGATTCCAGTTTCAGAGAGTTGGAACTACCAAAAGGAAGAGCAATTCAGGTTGAAGATAGTATGGTTGAACGCCAACCATCTTTTGATAGTAGGCATCCACGTAGTTTGGATTCTGATGTTGTGATACAGATTGCGGTGCAGGATGGCACTGAGGAAACCTCAAACTCTGGTGAGGAACAGGGCCATACAAATCTTACTGCACATGAGGCATCTGATAATGGAGAATTAACTGCAAATGGCAACCAAATTATTCCTGCCGAAGAAGATGATTTATTGGTAGGAACTCCGGAAGGGAACACAAGAAGATCAGACAGGTGTTCCCCGAGGATCAGTGCCACTTGTCCAATGAAAATAGATTCTGATCAAAGAAATAACCAGGTCGTTGCTCTGGATGGGTATGACCAAATTCAGGGGAATGCTGTCTCATTGGAGACTACTGAAATTGCAAATAAAACAAGGGACGGTGTTGGCAAGGATACTTTGTATGCTGATCAATGCCTGATGGAGGCACAATTATCATTTGGTGATGACGATCAACTTAGCCCCACTTCATCCTGTTTTGGAAGTGATTCTGAAGCATCAAAGAATGGTGTTCATTTTGATCCAGAAGATATTCATACTCCTGTCACATCATCTTTTGAGAACTCGAAAAGCAATGGCATCAAGAGAACAATAGTTGATATAAAAAATTATTCCACACGTAATAGTCATGCTCAAAAGGAGCATAAGCATCAGAAAAGGAGGCTTCACAGTGTTGTCGAACCAAAGATTCACATTAAAGATGATGATGATGATGATGCTTCCCTCACCTCGGAAATGGAGGACCTTTATGACAGGGATAGCTCATTGAATTATAGCAGACAGAAAAAAATTCTGCGAGATTTTGGCTGTAGTGATAGAGAAGATATTTCAGATTATAAAGAATCTCGGAGATATGCCGACAACCATGTTCATACCGCTAAAACAAATTATGTGGATAGAAAAGGTAATCACAAGATCCAAGACAAGCTAGATCCATTTTTCAGAAAAAACTGGAATGAAAGGGAGTATTTTTGTGAAGATAGGGATAGAGATTGGCATCGTTTTGGAAGAGCACGATTCTCTAAGGAGAGGAGTCCTCTCTCGAGCAGGGAGTCCAGGGGGTGGCATTCCAGTTATTCCCCACACACTGTTGAAGAAAGGGATGCTCAATTTAGAAGGAATGCCAAGAAACTGCAGTTTCAGAAAATACCCATCCATGGTGGTGGCCGTTTCGGTTATAAACGTGAAGATGACTTTGTGGGAGAAAAATTTAGGAAATGTGCTTCATTCACTGATCAAAGAACGAATAATTTGGATGAATTTGATGAAAGGCAGTTTCCTCGGCTCAGGAGAGAATTACAACACTCCAGGGGAAGGGGTGGATATGTTGACAGTCCCAATTTTGATTGGGATGATTCATGGTCTGAGAAAATTGAAAATGAATATTGCAGACATGGAGAAAATCAATATTTGTTCGATCAGTCTTACAAAGAATCATACGCAGGGGATGAAGGAAGGTGGATTGATTCCCTATCACCAAGAATTGATGTTTCTCACACAAGAGCAACTGATGAAAGATATTGGAGACATGCTAGAGAAACATACTCTGCTGAATTCAAAGAAAGTAATTGGTTTGATAATCGTTATAATGCTGATGAAATTGATGACATCATTTATCCGAGTGATCAATTTAAGTGGAGAAGATCTAACCAGCGATCTGAAGTCCTACACTGGACTGAGGATCAGTTAACTGTCAGGTGCCGTGGTGATAAATTGTATTCTGAGAAGTCATCCCTTTCATATCAGAAATTTGTAAGACATGACAAATTTCATGCTAAATATGGTTCCTACAATGATGCAATGCATGTTGATATGCTATCAGAGCAGGATAGACTAGAATTGATGAGAAAAGGAAGTAGTGCTAACTGTATTAATAGTAGTTCTAAGATGTATATCGGTAAGCATGAGCGGACGGCCCTGAGGTGCAGAGGTTCGATTGACTTGGTTGTTGGGGAAGGAAAGTCTGTAAGAAGCCACAAACGTGGAAGTTTGATTCGCAATGGTATGCTGGAAAATATGGATCCAGAGTTTGGTGGTGAGCAGACAACCTTAGCGGATTGTAGTCAATATGAGAAGGTGAGGGCAGTCCAATTTAACACCCAAAAAGTCGGACGCAACCAAAACAATACAAAAGGGCTCGATAAGTTTCCAGTTGAAAATGGTGATTTGGATGCTGAAGCGGGCCAGACTCTGACAGAAGACCTCAAGACGGCACATCCCTTACAGGGAAAACATGCTTCTGAGTATTCATCAGCAGCTCAGAATGTGAATAGGCGAACATTCTGTGGAGAAATTGGTTCCAGTGGGGACAAGGTTGCAGAAGGATATGACAACCAAAGGATTCTTGCGACGAAGGCAAAAATGGAGAAACGTGGGGAGCGTTTTAAGGAGCCAATCACCCTGAAAAAAGAGCCAGACAAGTTGTCCAAGCCTGAGATTGATCTAGTTGAAACAGCTGAAGCACAGTTACATAGGCCAAGCCGAAAGAGGAGGTGGGGCGGTATAGAGGCTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1134

Amino Acids

129.89

Weight (kDa)

5.34

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 172 - 213 5.5e-19 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 747, 1722, 2064, 2472
AccB1I GGYRCC 1 cut(s) 2583
AccB7I CCANNNNNTGG 2 cut(s) 1947, 2915
AccBSI CCGCTC 1 cut(s) 2794
AccIII TCCGGA 1 cut(s) 1090
AciI CCGC 9 cut(s) 306, 362, 785, 938, 1761, 2794, 2939, 3065, 3384
AcoI YGGCCR 3 cut(s) 63, 307, 2050
AcsI RAATTY 9 cut(s) 686, 725, 1209, 1674, 2093, 2144, 2438, 2633, 2651
AcuI CTGAAG 4 cut(s) 1398, 2565, 3081, 3363
AfaI GTAC 2 cut(s) 383, 617
AflIII ACRYGT 1 cut(s) 1502
AhdI GACNNNNNGTC 1 cut(s) 3307
AjnI CCWGG 7 cut(s) 145, 556, 627, 732, 1179, 1940, 2192
AleI CACNNNNGTG 1 cut(s) 2865
AluBI AGCT 6 cut(s) 423, 707, 1647, 1813, 3143, 3341
AluI AGCT 6 cut(s) 423, 707, 1647, 1813, 3143, 3341
Alw21I GWGCWC 2 cut(s) 425, 1900
Alw26I GTCTC 4 cut(s) 676, 1229, 1231, 2404
AlwNI CAGNNNCTG 1 cut(s) 3076
Ama87I CYCGRG 2 cut(s) 1126, 1927
Aor13HI TCCGGA 1 cut(s) 1090
AoxI GGCC 8 cut(s) 54, 63, 307, 985, 2050, 2799, 3067, 3359
ApeKI GCWGC 1 cut(s) 3140
ApoI RAATTY 9 cut(s) 686, 725, 1209, 1674, 2093, 2144, 2438, 2633, 2651
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 1 cut(s) 2757
Asp700I GAANNNNTTC 2 cut(s) 1372, 1416
AspLEI GCGC 1 cut(s) 52
AspS9I GGNCC 6 cut(s) 504, 767, 985, 1627, 2800, 3067
AsuII TTCGAA 1 cut(s) 158
AvaI CYCGRG 2 cut(s) 1126, 1927
AvaII GGWCC 3 cut(s) 504, 767, 1627
AxyI CCTNAGG 1 cut(s) 2804
BalI TGGCCA 1 cut(s) 65
BamHI GGATCC 2 cut(s) 663, 2905
BanI GGYRCC 1 cut(s) 2583
BanII GRGCYC 2 cut(s) 425, 3024
BarI GAAGNNNNNNTAC 2 cut(s) 3336, 3368
BbsI GAAGAC 1 cut(s) 3090
Bbv12I GWGCWC 2 cut(s) 425, 1900
BbvI GCAGC 1 cut(s) 3152
BccI CCATC 8 cut(s) 74, 347, 799, 889, 941, 1190, 1300, 2045
BceAI ACGGC 4 cut(s) 2037, 2571, 2814, 3111
BcgI CGANNNNNNTGC 2 cut(s) 2147, 2181
BciT130I CCWGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
BciVI GTATCC 2 cut(s) 564, 1273
BclI TGATCA 4 cut(s) 1165, 1294, 2119, 2509
BcoDI GTCTC 4 cut(s) 676, 1229, 1231, 2404
BfaI CTAG 6 cut(s) 141, 795, 1814, 2418, 2720, 3329
BfmI CTRYAG 2 cut(s) 1693, 2018
BfuI GTATCC 2 cut(s) 564, 1273
BglI GCCNNNNNGGC 1 cut(s) 62
BglII AGATCT 1 cut(s) 2528
BisI GCNGC 2 cut(s) 307, 3141
BlsI GCNGC 2 cut(s) 308, 3142
BmcAI AGTACT 1 cut(s) 617
Bme1390I CCNGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
Bme18I GGWCC 3 cut(s) 504, 767, 1627
BmeRI GACNNNNNGTC 1 cut(s) 3307
BmeT110I CYCGRG 2 cut(s) 1126, 1927
BmgT120I GGNCC 6 cut(s) 504, 767, 985, 1627, 2800, 3067
BmiI GGNNCC 7 cut(s) 151, 665, 2585, 2671, 2907, 3184, 3276
BmrFI CCNGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
BpiI GAAGAC 1 cut(s) 3090
BplI GAGNNNNNCTC 6 cut(s) 713, 745, 947, 979, 1906, 1938
BpmI CTGGAG 2 cut(s) 579, 2176
Bpu10I CCTNAGC 2 cut(s) 2171, 2935
Bpu14I TTCGAA 1 cut(s) 158
BpuEI CTTGAG 1 cut(s) 3074
BsaAI YACGTR 2 cut(s) 905, 1505
BsaBI GATNNNNATC 4 cut(s) 1164, 1335, 1881, 2777
BsaWI WCCGGW 1 cut(s) 1090
BsaXI ACNNNNNCTCC 4 cut(s) 552, 582, 608, 638
Bse1I ACTGG 7 cut(s) 57, 810, 1841, 1956, 2561, 3035, 3186
Bse21I CCTNAGG 1 cut(s) 2804
Bse3DI GCAATG 3 cut(s) 1465, 2691, 2890
Bse8I GATNNNNATC 4 cut(s) 1164, 1335, 1881, 2777
BseAI TCCGGA 1 cut(s) 1090
BseBI CCWGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
BseJI GATNNNNATC 4 cut(s) 1164, 1335, 1881, 2777
BseMI GCAATG 3 cut(s) 1465, 2691, 2890
BseNI ACTGG 7 cut(s) 57, 810, 1841, 1956, 2561, 3035, 3186
BseRI GAGGAG 5 cut(s) 197, 227, 551, 1930, 3388
BseX3I CGGCCG 1 cut(s) 307
BseXI GCAGC 1 cut(s) 3152
BsgI GTGCAG 3 cut(s) 962, 987, 2830
Bsh1285I CGRYCG 1 cut(s) 310
BshFI GGCC 8 cut(s) 56, 65, 309, 987, 2052, 2801, 3069, 3361
BshNI GGYRCC 1 cut(s) 2583
BsiEI CGRYCG 1 cut(s) 310
BsiHKAI GWGCWC 2 cut(s) 425, 1900
BsiHKCI CYCGRG 2 cut(s) 1126, 1927
BsiSI CCGG 1 cut(s) 1091
BslFI GGGAC 3 cut(s) 1277, 2205, 3206
BsmAI GTCTC 4 cut(s) 676, 1229, 1231, 2404
BsmFI GGGAC 3 cut(s) 1277, 2205, 3206
BsmI GAATGC 3 cut(s) 1225, 1951, 2011
BsnI GGCC 8 cut(s) 56, 65, 309, 987, 2052, 2801, 3069, 3361
BsoBI CYCGRG 2 cut(s) 1126, 1927
Bsp119I TTCGAA 1 cut(s) 158
Bsp1286I GDGCHC 3 cut(s) 425, 1900, 3024
Bsp13I TCCGGA 1 cut(s) 1090
Bsp19I CCATGG 2 cut(s) 545, 2041
BspACI CCGC 9 cut(s) 306, 362, 785, 938, 1761, 2794, 2939, 3065, 3384
BspANI GGCC 8 cut(s) 56, 65, 309, 987, 2052, 2801, 3069, 3361
BspEI TCCGGA 1 cut(s) 1090
BspLI GGNNCC 7 cut(s) 151, 665, 2585, 2671, 2907, 3184, 3276
BspMAI CTGCAG 1 cut(s) 2022
BspQI GCTCTTC 2 cut(s) 835, 1888
BspT104I TTCGAA 1 cut(s) 158
BspT107I GGYRCC 1 cut(s) 2583
BsrBI CCGCTC 1 cut(s) 2794
BsrDI GCAATG 3 cut(s) 1465, 2691, 2890
BsrI ACTGG 7 cut(s) 57, 810, 1841, 1956, 2561, 3035, 3186
BssT1I CCWWGG 3 cut(s) 494, 545, 2041
Bst2UI CCWGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
Bst6I CTCTTC 2 cut(s) 835, 1888
BstBAI YACGTR 2 cut(s) 905, 1505
BstBI TTCGAA 1 cut(s) 158
BstC8I GCNNGC 3 cut(s) 40, 54, 3067
BstDSI CCRYGG 3 cut(s) 545, 2041, 2587
BstENI CCTNNNNNAGG 1 cut(s) 1307
BstHHI GCGC 1 cut(s) 52
BstMAI GTCTC 4 cut(s) 676, 1229, 1231, 2404
BstMCI CGRYCG 1 cut(s) 310
BstMWI GCNNNNNNNGC 8 cut(s) 62, 86, 137, 704, 713, 1010, 2707, 3239
BstNI CCWGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
BstNSI RCATGY 3 cut(s) 2417, 2693, 3122
BstSCI CCNGG 7 cut(s) 145, 556, 627, 732, 1179, 1940, 2192
BstSFI CTRYAG 2 cut(s) 1693, 2018
BstV1I GCAGC 1 cut(s) 3152
BstV2I GAAGAC 1 cut(s) 3090
BstX2I RGATCY 6 cut(s) 663, 710, 1800, 1816, 2528, 2905
BstXI CCANNNNNNTGG 2 cut(s) 2048, 2867
BstYI RGATCY 6 cut(s) 663, 710, 1800, 1816, 2528, 2905
BstZI CGGCCG 1 cut(s) 307
Bsu36I CCTNAGG 1 cut(s) 2804
BsuI GTATCC 2 cut(s) 564, 1273
BsuRI GGCC 8 cut(s) 56, 65, 309, 987, 2052, 2801, 3069, 3361
BtgI CCRYGG 3 cut(s) 545, 2041, 2587
BtsIMutI CAGTG 7 cut(s) 951, 1141, 1561, 1971, 2115, 2554, 3193
Cac8I GCNNGC 3 cut(s) 40, 54, 3067
CaiI CAGNNNCTG 1 cut(s) 3076
CfoI GCGC 1 cut(s) 52
Cfr13I GGNCC 6 cut(s) 504, 767, 985, 1627, 2800, 3067
CseI GACGC 2 cut(s) 669, 3006
CsiI ACCWGGT 1 cut(s) 1179
Csp6I GTAC 2 cut(s) 382, 616
CspCI CAANNNNNGTGG 6 cut(s) 891, 926, 1758, 1793, 2501, 2536
CviQI GTAC 2 cut(s) 382, 616
DriI GACNNNNNGTC 1 cut(s) 3307
EaeI YGGCCR 3 cut(s) 63, 307, 2050
EagI CGGCCG 1 cut(s) 307
Eam1104I CTCTTC 2 cut(s) 835, 1888
Eam1105I GACNNNNNGTC 1 cut(s) 3307
EarI CTCTTC 2 cut(s) 835, 1888
EciI GGCGGA 2 cut(s) 351, 774
Ecl136II GAGCTC 1 cut(s) 423
EclXI CGGCCG 1 cut(s) 307
Eco130I CCWWGG 3 cut(s) 494, 545, 2041
Eco24I GRGCYC 2 cut(s) 425, 3024
Eco47I GGWCC 3 cut(s) 504, 767, 1627
Eco52I CGGCCG 1 cut(s) 307
Eco53kI GAGCTC 1 cut(s) 423
Eco57I CTGAAG 4 cut(s) 1398, 2565, 3081, 3363
Eco81I CCTNAGG 1 cut(s) 2804
Eco88I CYCGRG 2 cut(s) 1126, 1927
EcoICRI GAGCTC 1 cut(s) 423
EcoNI CCTNNNNNAGG 1 cut(s) 1307
EcoO109I RGGNCCY 1 cut(s) 1627
EcoRI GAATTC 1 cut(s) 2438
EcoRII CCWGG 7 cut(s) 145, 556, 627, 732, 1179, 1940, 2192
EcoT14I CCWWGG 3 cut(s) 494, 545, 2041
EcoT22I ATGCAT 1 cut(s) 2691
EcoT38I GRGCYC 2 cut(s) 425, 3024
ErhI CCWWGG 3 cut(s) 494, 545, 2041
FaqI GGGAC 3 cut(s) 1277, 2205, 3206
FauI CCCGC 1 cut(s) 3058
FbaI TGATCA 4 cut(s) 1165, 1294, 2119, 2509
Fnu4HI GCNGC 2 cut(s) 307, 3141
FriOI GRGCYC 2 cut(s) 425, 3024
Fsp4HI GCNGC 2 cut(s) 307, 3141
FspBI CTAG 6 cut(s) 141, 795, 1814, 2418, 2720, 3329
GlaI GCGC 1 cut(s) 51
GluI GCNGC 2 cut(s) 307, 3141
GsuI CTGGAG 2 cut(s) 579, 2176
HaeIII GGCC 8 cut(s) 56, 65, 309, 987, 2052, 2801, 3069, 3361
HapII CCGG 1 cut(s) 1091
HgaI GACGC 2 cut(s) 669, 3006
HhaI GCGC 1 cut(s) 52
Hin6I GCGC 1 cut(s) 50
HinP1I GCGC 1 cut(s) 50
HincII GTYRAC 2 cut(s) 2215, 2574
HindII GTYRAC 2 cut(s) 2215, 2574
HpaI GTTAAC 1 cut(s) 2574
HpaII CCGG 1 cut(s) 1091
Hpy166II GTNNAC 3 cut(s) 520, 2215, 2574
Hpy8I GTNNAC 3 cut(s) 520, 2215, 2574
Hpy99I CGWCG 2 cut(s) 17, 3238
HpyAV CCTTC 9 cut(s) 1088, 1995, 2193, 2330, 2334, 2834, 2953, 3200, 3232
HpyCH4IV ACGT 5 cut(s) 904, 1504, 2068, 2866, 3256
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 86, 137, 704, 713, 1010, 2707, 3239
HpySE526I ACGT 5 cut(s) 904, 1504, 2068, 2866, 3256
HspAI GCGC 1 cut(s) 50
Kpn2I TCCGGA 1 cut(s) 1090
Ksp22I TGATCA 4 cut(s) 1165, 1294, 2119, 2509
KspAI GTTAAC 1 cut(s) 2574
LguI GCTCTTC 2 cut(s) 835, 1888
LmnI GCTCC 5 cut(s) 155, 787, 1525, 3262, 3274
Lsp1109I GCAGC 1 cut(s) 3152
MabI ACCWGGT 1 cut(s) 1179
MaeI CTAG 6 cut(s) 141, 795, 1814, 2418, 2720, 3329
MaeII ACGT 5 cut(s) 904, 1504, 2068, 2866, 3256
MaeIII GTNAC 3 cut(s) 568, 1429, 3351
MbiI CCGCTC 1 cut(s) 2794
MflI RGATCY 6 cut(s) 663, 710, 1800, 1816, 2528, 2905
MhlI GDGCHC 3 cut(s) 425, 1900, 3024
MlsI TGGCCA 1 cut(s) 65
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 3 cut(s) 1927, 1946, 3067
MmeI TCCRAC 3 cut(s) 587, 804, 2974
Mox20I TGGCCA 1 cut(s) 65
Mph1103I ATGCAT 1 cut(s) 2691
MroI TCCGGA 1 cut(s) 1090
MroXI GAANNNNTTC 2 cut(s) 1372, 1416
MscI TGGCCA 1 cut(s) 65
MseI TTAA 7 cut(s) 1031, 1581, 2517, 2573, 2757, 2979, 3270
MslI CAYNNNNRTG 3 cut(s) 339, 2046, 2865
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 3341
MspI CCGG 1 cut(s) 1091
MspR9I CCNGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
Mva1269I GAATGC 3 cut(s) 1225, 1951, 2011
MvaI CCWGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
MwoI GCNNNNNNNGC 8 cut(s) 62, 86, 137, 704, 713, 1010, 2707, 3239
NcoI CCATGG 2 cut(s) 545, 2041
NlaIV GGNNCC 7 cut(s) 151, 665, 2585, 2671, 2907, 3184, 3276
NmeAIII GCCGAG 2 cut(s) 335, 2146
NmuCI GTSAC 1 cut(s) 1429
NsiI ATGCAT 1 cut(s) 2691
NspI RCATGY 3 cut(s) 2417, 2693, 3122
NspV TTCGAA 1 cut(s) 158
OliI CACNNNNGTG 1 cut(s) 2865
PaeR7I CTCGAG 1 cut(s) 1927
PciSI GCTCTTC 2 cut(s) 835, 1888
PcsI WCGNNNNNNNCGW 2 cut(s) 594, 3262
PctI GAATGC 3 cut(s) 1225, 1951, 2011
PdmI GAANNNNTTC 2 cut(s) 1372, 1416
PflMI CCANNNNNTGG 2 cut(s) 1947, 2915
PfoI TCCNGGA 1 cut(s) 556
PkrI GCNGC 2 cut(s) 308, 3142
PleI GAGTC 3 cut(s) 1926, 1945, 3067
PpsI GAGTC 3 cut(s) 1926, 1945, 3067
Ppu21I YACGTR 2 cut(s) 905, 1505
PpuMI RGGWCCY 1 cut(s) 1627
PshBI ATTAAT 1 cut(s) 2757
PsiI TTATAA 4 cut(s) 747, 1722, 2064, 2472
Psp124BI GAGCTC 1 cut(s) 425
Psp5II RGGWCCY 1 cut(s) 1627
Psp6I CCWGG 7 cut(s) 145, 556, 627, 732, 1179, 1940, 2192
PspGI CCWGG 7 cut(s) 145, 556, 627, 732, 1179, 1940, 2192
PspN4I GGNNCC 7 cut(s) 151, 665, 2585, 2671, 2907, 3184, 3276
PspPI GGNCC 6 cut(s) 504, 767, 985, 1627, 2800, 3067
PspPPI RGGWCCY 1 cut(s) 1627
PstI CTGCAG 1 cut(s) 2022
PstNI CAGNNNCTG 1 cut(s) 3076
PsuI RGATCY 6 cut(s) 663, 710, 1800, 1816, 2528, 2905
PvuII CAGCTG 1 cut(s) 3341
RsaI GTAC 2 cut(s) 383, 617
RsaNI GTAC 2 cut(s) 382, 616
RseI CAYNNNNRTG 3 cut(s) 339, 2046, 2865
SacI GAGCTC 1 cut(s) 425
SapI GCTCTTC 2 cut(s) 835, 1888
SaqAI TTAA 7 cut(s) 1031, 1581, 2517, 2573, 2757, 2979, 3270
SatI GCNGC 2 cut(s) 307, 3141
Sau96I GGNCC 6 cut(s) 504, 767, 985, 1627, 2800, 3067
ScaI AGTACT 1 cut(s) 617
SchI GAGTC 3 cut(s) 1927, 1946, 3067
ScrFI CCNGG 7 cut(s) 147, 558, 629, 734, 1181, 1942, 2194
SduI GDGCHC 3 cut(s) 425, 1900, 3024
SexAI ACCWGGT 1 cut(s) 1179
SfcI CTRYAG 2 cut(s) 1693, 2018
SfiI GGCCNNNNNGGCC 1 cut(s) 62
Sfr274I CTCGAG 1 cut(s) 1927
SfuI TTCGAA 1 cut(s) 158
SinI GGWCC 3 cut(s) 504, 767, 1627
SlaI CTCGAG 1 cut(s) 1927
SmiMI CAYNNNNRTG 3 cut(s) 339, 2046, 2865
SmlI CTYRAG 2 cut(s) 1927, 3089
SmoI CTYRAG 2 cut(s) 1927, 3089
SsiI CCGC 9 cut(s) 306, 362, 785, 938, 1761, 2794, 2939, 3065, 3384
SspI AATATT 2 cut(s) 2270, 2294
SspMI CTAG 6 cut(s) 141, 795, 1814, 2418, 2720, 3329
SstI GAGCTC 1 cut(s) 425
StyD4I CCNGG 7 cut(s) 145, 556, 627, 732, 1179, 1940, 2192
StyI CCWWGG 3 cut(s) 494, 545, 2041
TaiI ACGT 5 cut(s) 907, 1507, 2071, 2869, 3259
TatI WGTACW 1 cut(s) 615
TauI GCSGC 1 cut(s) 309
Tru1I TTAA 7 cut(s) 1031, 1581, 2517, 2573, 2757, 2979, 3270
Tru9I TTAA 7 cut(s) 1031, 1581, 2517, 2573, 2757, 2979, 3270
TscAI CASTG 7 cut(s) 958, 1141, 1561, 1978, 2122, 2561, 3193
TseFI GTSAC 1 cut(s) 1429
TseI GCWGC 1 cut(s) 3140
Tsp45I GTSAC 1 cut(s) 1429
TspRI CASTG 7 cut(s) 958, 1141, 1561, 1978, 2122, 2561, 3193
Van91I CCANNNNNTGG 2 cut(s) 1947, 2915
VpaK11BI GGWCC 3 cut(s) 504, 767, 1627
VspI ATTAAT 1 cut(s) 2757
XagI CCTNNNNNAGG 1 cut(s) 1307
XapI RAATTY 9 cut(s) 686, 725, 1209, 1674, 2093, 2144, 2438, 2633, 2651
XbaI TCTAGA 1 cut(s) 794
XceI RCATGY 3 cut(s) 2417, 2693, 3122
XhoI CTCGAG 1 cut(s) 1927
XmnI GAANNNNTTC 2 cut(s) 1372, 1416
XspI CTAG 6 cut(s) 141, 795, 1814, 2418, 2720, 3329
ZrmI AGTACT 1 cut(s) 617
Zsp2I ATGCAT 1 cut(s) 2691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.