Rh4BG263800

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0004701
Physical Location & Seq
Forward (+)
43757938 .. 43764777
6840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG263800.1

Sequence Viewer

Length: 3570 bp
ATGGCAGATTTGGACGACGATTTTGGAGACATCTACACTGATGTCGAAGCGCAGGCCGCTTCAGCCATCAACGGCGTATCGGACTTCGCTCAGTTCTATACAGAACCCGAAGAAGATAGAAATGATAGTAACAACAATGCAAAGAACGGCGACAATTGCTCCGGCGAGGGTTTCGTCTCCGATTCTAAGAAACTCAAAGAGGAATTGGGTGGTAAAGTTTCGGGTTCGGAGTCGGATGAGGATTACAGTGACAGTGACAGTGACAGTGAGGATGACCTGAATATAGTTTTGAACGATGGGGGCTGTAAAGGTATTCCCTTTCCGGTTTCAGGTGGAGGGGGCATGAGGAGGATTGATGATTATGAAGATGAGGATGATGATGCTCTTGTGCCCATGAAAGATTGCAAGTATGTATGGACTCAAGGATCTACTTGTCCAAGCAATGGAAAAGCCAATGAGTCTGTGGATTTGGTGTCGTCCATGCCGTTTGGAGTAGACCACCCGCAGATTAGTCGTGTTCGTGATGCACCTAATCCAGTGGTGACTCGAAATAGATATGGTTTTCGACTTCCTTGGTATAGGACCATACTGGACGTGGATATTGAATCATTTGAGGAGAAGTCATGGAGGTATCCTGGAGTTGATATAACAGATTACTTCAATTTTGATTTGAACGAGGACAGCTGGAAAGAGTACTGCAACTCCCTGGAACAACTTCGGCAGCTAAAATCCACACAGTATGGCATGCCTGGCTCTTCAAAATTTTATCAGGCTAAAGAAGCTGGATCTGAGTATGGCAGATTCACCCAGGAAACTATGCCTAAAGAAATGAATTATGCTGGATCATGGACATATGCCCCTCCGTCATCAACAGTTTCTGATTGCAGACCAAAAGGGAAAGCAATTCAGATAGAAGATAGTGTTGTTGAACGCCAACCATCTTTTGATAGCAGGCATCCACGAAGTTGGAATTCTGATGTTGTGATACAGATTTCTGTGCATGATCCCACCCAGGAAACCTCCCATTCTGGTGAGGAACATGGGCATACAAATAGCAGGGCCCATGAGACATCTGAAAACGGGGAGCTTGATGCAAATGGAAACCAAAACAATATCTCATATAATACTACGACCGATGATGATTCATCATTAGGAAGTCCAGAAGCAAACACAAGAAAATTAGACAGATGTTCCCAGAAGATCAGTGCATCCCATCCAATGACAATAGACTCCGATGATCACAGTAACCAGGTCATTGGTGTTGATGGGGATAACCATAAGGAGGTGAATGGTATCTCATTGGAGGCCATTGAAATTGCAAATAAAGTGACAGAAAGTCTTGACAGGAATACTTCCTGTGCTGATCAATGCATGATGGAGACACTATTATTGCTGAGTGATGACGATGATCAACTTAGTCTCATTTCATCATGTTTTGCATCTGATTCTGAAGCTTCCAAGAACAGTGTTCATTTTGATCCAGAAGATATTCATACTCCTGTAAGCCCTGTGGTGAATTCACATACTGAACCACGCAAGCCTGTCACATCATCTTTTAAGAACTCAAAAAGCAATTGCATCAAAAGAAAAAGAGTTGATATCCAAGATTATTCCATCTGTAGAAGTTATTCTCAAAAGAAGCATAATCATCAGGCCAGGAGGCTTAATGGTGTTGATGAACCAAGTAAGCACAGAAACAACGACAATGATAGGTCACCCACCTCAGATACAGAGGACCCATATAACAGGAATTGCTCAGAGAATTTTCGTGGACAGAAGGACAGGCTGCAAGATTCTGGCGGTAGTAACAGAGAAGATAGTCCAGATTATAAAGAACCAAAGTTTTCCTGCCATTATGGTATTAGATATGATGATAACCATCATCGGAATCAAAGAGATAAGAGAAAATTTTCAAGTAGAAAAGGTAGTCACCTGTTCCAAGAGAAACTAGATCCATATGCGAAAAGAACTTTTAATGAAAGGCAGACTTTCTGTGAAGATAAGGAAAGAGATTGGAGTCACTTTGGAAGAACGCAGTTCACTGAGGAGAGGAGTCCTCTCCCCAGCAGGGAGTCCAGGGGGTTGCATTCTAGGTGTTCCTCCACTGTTGAGGAAAGGGATGCTCAATGGGGAAGGAATAGCAACAAACTGCTATTTAAGAAAATATCCAATTATAAGTGGCATGAAGACGATTTTCTGGGAGAAAAAGCTGGGAGATACGCATCATTCACTAGTCGAAAAAGGAATAATTTTGATGACTTTGATGAGAGGCAGTTGCCACCTGTCAGGAGAGAATTAAGTAACTGGGGGCGAAGGGTTGGATATGTGGACAGTCCCATTTATTTGGATGATTCACACTCTGAGCAATTTGAAGATGAATATTGCAAACACAGAGAAAATCGAGACTGCTCCCATCAGTCTTACAGAGACTTATATACAGCTGATGAAGGAAGCTGGAATCTCTCCATATCACCAAGAAATGATGTTTCTTACCCAAGAACAAGTGATGAAAGATATTGGAGACGTGTGAGAAAAATAGATGCCGAAGAAGCCAATCAGATTAATTGGTTTGATGATCACTATGATGCTTATGAAATCGAAGATAACATGTATCGTAATGATCATTTAAGGTGGAGAAGATCTAACTGGCGATCTGAAGTTATGCACTGGACTGAAGACCAGTTTACTTTCAGACATCACGGTGATGAATTGTATTCTGAGAAAGCATCACGTTCATATCAGAAATTTGTACGGCGTGAAAAATTTCATGCTAAATATGGTCCTCTGCGTGATGGAATGCCTATTGATATTATGCAGCCAGAGCAGCATGGATTGAAAATGCCCAGAAAAGGAGTCGGTGCTAACTTTATTAATAGAAGTGCTAAGATGCATAGAGTTAAGCATGAGCAGATGTTGAGGCGCAGGGATTCGATGGACTTGGCTGTTAGGGAACAAAAGATCTCTGCAAGATGCTCCAAAGCCAGATTTTCGATATGCAATGGTAGGCCAGAAAGTATGGGTGCAGAGATTAGTGGAGAGGGGATAACCTCAGGGAAATCGCAGTCATGTGAATCTGAGAAGGCGAGGGCAGTAGAAATCACCCAAAAATTTGCATGGGACCGAAACAACGAGAAAGGGCATCATATGTTTCGAGTTACAAATCAAAATGCTGATTTGGATATAGAGGAGGGCCAGATTGTAATACAAGAACAGAATACAGCAAATCCTTTGCAGAGAAAACATGCTTATGATCACACAGCACCAGCCCACAGCGTGAAAAAGAGAATGTTTGATTGTCATAATGCTTCCAATGGGAATCAGGTTGTAGAAGGATATGACAAACAAAAGATTCTTCAGACAATGGCTAAAATGGAGCAACGTGAGGAGCGCTTTAAGGAGCCGATCACCTTAAAAAAGGAGCCAGACAAGTTGTTCAAGCCTGAGGTTGATCCCACAGTTCAAGCAGCTGAAGAAAAGCAACATAGGCCAGCCCGAAAGAGGCAGTGGGGTGGTAGGTTCTCAAAGAATGACTCTCTAATGTTGGGAATTCCATTGAAAGCAAGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1189

Amino Acids

137.07

Weight (kDa)

5.7

Isoelectric Point (pI)

52.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 198 - 240 9.9e-20 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1830, 2175
AccB7I CCANNNNNTGG 1 cut(s) 443
AccI GTMKAC 1 cut(s) 495
AciI CCGC 3 cut(s) 57, 503, 1800
AclWI GGATC 7 cut(s) 433, 793, 850, 998, 1472, 1946, 3443
AcsI RAATTY 9 cut(s) 761, 970, 1516, 1762, 1907, 2744, 2762, 3107, 3546
AcuI CTGAAG 6 cut(s) 45, 1470, 2676, 2694, 3338, 3489
AdeI CACNNNGTG 1 cut(s) 3274
AfaI GTAC 2 cut(s) 695, 2751
AfeI AGCGCT 1 cut(s) 3389
AfiI CCNNNNNNNGG 6 cut(s) 329, 443, 1282, 2068, 2849, 3498
AflIII ACRYGT 2 cut(s) 2524, 2607
AhdI GACNNNNNGTC 1 cut(s) 1335
AhlI ACTAGT 1 cut(s) 2231
AjiI CACGTC 2 cut(s) 595, 2525
AjnI CCWGG 8 cut(s) 634, 705, 748, 807, 1011, 1248, 1655, 2075
AluBI AGCT 9 cut(s) 684, 724, 782, 1087, 1454, 2210, 2441, 2454, 3467
AluI AGCT 9 cut(s) 684, 724, 782, 1087, 1454, 2210, 2441, 2454, 3467
Alw26I GTCTC 8 cut(s) 21, 181, 1061, 1373, 1424, 2397, 2421, 2515
AlwI GGATC 7 cut(s) 433, 793, 850, 998, 1472, 1946, 3443
AlwNI CAGNNNCTG 1 cut(s) 878
Aor51HI AGCGCT 1 cut(s) 3389
AoxI GGCC 7 cut(s) 54, 1059, 1305, 1653, 3005, 3190, 3485
ApaI GGGCCC 1 cut(s) 1063
ApeKI GCWGC 5 cut(s) 721, 1786, 2815, 2824, 3464
ApoI RAATTY 9 cut(s) 761, 970, 1516, 1762, 1907, 2744, 2762, 3107, 3546
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 2 cut(s) 2562, 2871
Asp700I GAANNNNTTC 5 cut(s) 714, 1488, 1627, 1909, 2763
AspLEI GCGC 3 cut(s) 52, 2922, 3390
AspS9I GGNCC 7 cut(s) 582, 1059, 1060, 1735, 2780, 3118, 3190
AvaII GGWCC 4 cut(s) 582, 1735, 2780, 3118
AxyI CCTNAGG 2 cut(s) 3049, 3441
BaeGI GKGCMC 2 cut(s) 393, 1063
BanII GRGCYC 1 cut(s) 1063
BbsI GAAGAC 2 cut(s) 2193, 2682
BbvI GCAGC 5 cut(s) 733, 1773, 2827, 2836, 3476
BceAI ACGGC 4 cut(s) 88, 163, 469, 2768
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BciT130I CCWGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
BciVI GTATCC 1 cut(s) 642
BclI TGATCA 6 cut(s) 1237, 1363, 1408, 2575, 2620, 3250
BcoDI GTCTC 8 cut(s) 21, 181, 1061, 1373, 1424, 2397, 2421, 2515
BcuI ACTAGT 1 cut(s) 2231
BfaI CTAG 3 cut(s) 1949, 2091, 2232
BfmI CTRYAG 1 cut(s) 1618
BfoI RGCGCY 1 cut(s) 3391
BfuI GTATCC 1 cut(s) 642
BglII AGATCT 2 cut(s) 2639, 2958
BisI GCNGC 6 cut(s) 57, 722, 1787, 2816, 2825, 3465
BlsI GCNGC 6 cut(s) 58, 723, 1788, 2817, 2826, 3466
BmcAI AGTACT 1 cut(s) 695
Bme1390I CCNGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
Bme18I GGWCC 4 cut(s) 582, 1735, 2780, 3118
BmeRI GACNNNNNGTC 1 cut(s) 1335
BmgBI CACGTC 2 cut(s) 595, 2525
BmgT120I GGNCC 7 cut(s) 582, 1059, 1060, 1735, 2780, 3118, 3190
BmiI GGNNCC 5 cut(s) 1061, 1737, 3119, 3399, 3420
BmrFI CCNGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
BmrI ACTGGG 1 cut(s) 2314
BmuI ACTGGG 1 cut(s) 2314
BpiI GAAGAC 2 cut(s) 2193, 2682
BplI GAGNNNNNCTC 2 cut(s) 2041, 2073
BpmI CTGGAG 1 cut(s) 657
BpuEI CTTGAG 1 cut(s) 405
BsaBI GATNNNNATC 2 cut(s) 1878, 2221
BsaJI CCNNGG 5 cut(s) 572, 705, 807, 1011, 2076
BsaWI WCCGGW 1 cut(s) 322
BsaXI ACNNNNNCTCC 4 cut(s) 143, 173, 686, 716
Bsc4I CCNNNNNNNGG 6 cut(s) 329, 443, 1282, 2068, 2849, 3498
Bse1I ACTGG 6 cut(s) 536, 594, 2309, 2651, 2672, 2680
Bse21I CCTNAGG 2 cut(s) 3049, 3441
Bse3DI GCAATG 2 cut(s) 448, 3004
Bse8I GATNNNNATC 2 cut(s) 1878, 2221
BseBI CCWGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
BseDI CCNNGG 5 cut(s) 572, 705, 807, 1011, 2076
BseGI GGATG 8 cut(s) 241, 277, 379, 955, 1208, 1213, 2125, 2353
BseJI GATNNNNATC 2 cut(s) 1878, 2221
BseLI CCNNNNNNNGG 6 cut(s) 329, 443, 1282, 2068, 2849, 3498
BseMI GCAATG 2 cut(s) 448, 3004
BseNI ACTGG 6 cut(s) 536, 594, 2309, 2651, 2672, 2680
BseRI GAGGAG 6 cut(s) 361, 629, 2060, 2065, 3200, 3398
BseSI GKGCMC 2 cut(s) 393, 1063
BseXI GCAGC 5 cut(s) 733, 1773, 2827, 2836, 3476
BseYI CCCAGC 2 cut(s) 2063, 2210
BsgI GTGCAG 1 cut(s) 3042
Bsh1285I CGRYCG 1 cut(s) 1134
BshFI GGCC 7 cut(s) 56, 1061, 1307, 1655, 3007, 3192, 3487
BsiEI CGRYCG 1 cut(s) 1134
BsiSI CCGG 2 cut(s) 162, 323
BslFI GGGAC 2 cut(s) 2319, 3131
BslI CCNNNNNNNGG 6 cut(s) 329, 443, 1282, 2068, 2849, 3498
BsmAI GTCTC 8 cut(s) 21, 181, 1061, 1373, 1424, 2397, 2421, 2515
BsmBI CGTCTC 2 cut(s) 181, 2515
BsmFI GGGAC 2 cut(s) 2319, 3131
BsmI GAATGC 2 cut(s) 2086, 2802
BsnI GGCC 7 cut(s) 56, 1061, 1307, 1655, 3007, 3192, 3487
Bsp120I GGGCCC 1 cut(s) 1059
Bsp1286I GDGCHC 2 cut(s) 393, 1063
BspACI CCGC 3 cut(s) 57, 503, 1800
BspANI GGCC 7 cut(s) 56, 1061, 1307, 1655, 3007, 3192, 3487
BspLI GGNNCC 5 cut(s) 1061, 1737, 3119, 3399, 3420
BspPI GGATC 7 cut(s) 433, 793, 850, 998, 1472, 1946, 3443
BspQI GCTCTTC 1 cut(s) 760
BsrDI GCAATG 2 cut(s) 448, 3004
BsrI ACTGG 6 cut(s) 536, 594, 2309, 2651, 2672, 2680
BssECI CCNNGG 5 cut(s) 572, 705, 807, 1011, 2076
BssT1I CCWWGG 1 cut(s) 572
Bst2UI CCWGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
Bst6I CTCTTC 1 cut(s) 760
BstC8I GCNNGC 5 cut(s) 54, 746, 953, 1538, 3489
BstEII GGTNACC 1 cut(s) 1713
BstF5I GGATG 8 cut(s) 241, 277, 379, 955, 1208, 1213, 2125, 2353
BstH2I RGCGCY 1 cut(s) 3391
BstHHI GCGC 3 cut(s) 52, 2922, 3390
BstMAI GTCTC 8 cut(s) 21, 181, 1061, 1373, 1424, 2397, 2421, 2515
BstMCI CGRYCG 1 cut(s) 1134
BstMWI GCNNNNNNNGC 9 cut(s) 56, 62, 156, 750, 779, 2549, 2821, 2824, 3484
BstNI CCWGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
BstNSI RCATGY 3 cut(s) 748, 2611, 3245
BstPI GGTNACC 1 cut(s) 1713
BstSCI CCNGG 8 cut(s) 634, 705, 748, 807, 1011, 1248, 1655, 2075
BstSFI CTRYAG 1 cut(s) 1618
BstSLI GKGCMC 2 cut(s) 393, 1063
BstV1I GCAGC 5 cut(s) 733, 1773, 2827, 2836, 3476
BstV2I GAAGAC 2 cut(s) 2193, 2682
BstX2I RGATCY 5 cut(s) 425, 785, 1951, 2639, 2958
BstXI CCANNNNNNTGG 3 cut(s) 966, 1256, 2344
BstYI RGATCY 5 cut(s) 425, 785, 1951, 2639, 2958
Bsu36I CCTNAGG 2 cut(s) 3049, 3441
BsuI GTATCC 1 cut(s) 642
BsuRI GGCC 7 cut(s) 56, 1061, 1307, 1655, 3007, 3192, 3487
BtrI CACGTC 2 cut(s) 595, 2525
BtsCI GGATG 8 cut(s) 241, 277, 379, 955, 1208, 1213, 2125, 2353
BtsI GCAGTG 1 cut(s) 3509
Cac8I GCNNGC 5 cut(s) 54, 746, 953, 1538, 3489
CaiI CAGNNNCTG 1 cut(s) 878
CfoI GCGC 3 cut(s) 52, 2922, 3390
Cfr13I GGNCC 7 cut(s) 582, 1059, 1060, 1735, 2780, 3118, 3190
CsiI ACCWGGT 1 cut(s) 1248
Csp6I GTAC 2 cut(s) 694, 2750
CviQI GTAC 2 cut(s) 694, 2750
DraIII CACNNNGTG 1 cut(s) 3274
DriI GACNNNNNGTC 1 cut(s) 1335
Eam1104I CTCTTC 1 cut(s) 760
Eam1105I GACNNNNNGTC 1 cut(s) 1335
EarI CTCTTC 1 cut(s) 760
Eco130I CCWWGG 1 cut(s) 572
Eco24I GRGCYC 1 cut(s) 1063
Eco32I GATATC 1 cut(s) 1600
Eco47I GGWCC 4 cut(s) 582, 1735, 2780, 3118
Eco47III AGCGCT 1 cut(s) 3389
Eco57I CTGAAG 6 cut(s) 45, 1470, 2676, 2694, 3338, 3489
Eco81I CCTNAGG 2 cut(s) 3049, 3441
Eco91I GGTNACC 1 cut(s) 1713
EcoO109I RGGNCCY 2 cut(s) 1059, 1735
EcoO65I GGTNACC 1 cut(s) 1713
EcoRI GAATTC 3 cut(s) 970, 1516, 3546
EcoRII CCWGG 8 cut(s) 634, 705, 748, 807, 1011, 1248, 1655, 2075
EcoRV GATATC 1 cut(s) 1600
EcoT14I CCWWGG 1 cut(s) 572
EcoT22I ATGCAT 2 cut(s) 1373, 2892
EcoT38I GRGCYC 1 cut(s) 1063
ErhI CCWWGG 1 cut(s) 572
Esp3I CGTCTC 2 cut(s) 181, 2515
FalI AAGNNNNNCTT 2 cut(s) 1972, 2004
FaqI GGGAC 2 cut(s) 2319, 3131
FauI CCCGC 1 cut(s) 510
FauNDI CATATG 3 cut(s) 853, 1957, 3144
FbaI TGATCA 6 cut(s) 1237, 1363, 1408, 2575, 2620, 3250
FblI GTMKAC 1 cut(s) 495
Fnu4HI GCNGC 6 cut(s) 57, 722, 1787, 2816, 2825, 3465
FokI GGATG 8 cut(s) 248, 284, 386, 942, 1195, 1200, 2132, 2360
FriOI GRGCYC 1 cut(s) 1063
Fsp4HI GCNGC 6 cut(s) 57, 722, 1787, 2816, 2825, 3465
FspBI CTAG 3 cut(s) 1949, 2091, 2232
GlaI GCGC 3 cut(s) 51, 2921, 3389
GluI GCNGC 6 cut(s) 57, 722, 1787, 2816, 2825, 3465
GsaI CCCAGC 2 cut(s) 2067, 2214
GsuI CTGGAG 1 cut(s) 657
HaeII RGCGCY 1 cut(s) 3391
HaeIII GGCC 7 cut(s) 56, 1061, 1307, 1655, 3007, 3192, 3487
HapII CCGG 2 cut(s) 162, 323
HhaI GCGC 3 cut(s) 52, 2922, 3390
Hin6I GCGC 3 cut(s) 50, 2920, 3388
HinP1I GCGC 3 cut(s) 50, 2920, 3388
HindIII AAGCTT 1 cut(s) 1452
HpaII CCGG 2 cut(s) 162, 323
Hpy166II GTNNAC 5 cut(s) 496, 1772, 2040, 2329, 2685
Hpy188III TCNNGA 7 cut(s) 521, 1160, 1340, 1481, 1823, 2287, 2402
Hpy8I GTNNAC 5 cut(s) 496, 1772, 2040, 2329, 2685
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 6 cut(s) 1771, 2127, 2307, 2441, 3073, 3323
HpyCH4IV ACGT 4 cut(s) 594, 2524, 2731, 3379
HpyF10VI GCNNNNNNNGC 9 cut(s) 56, 62, 156, 750, 779, 2549, 2821, 2824, 3484
HpySE526I ACGT 4 cut(s) 594, 2524, 2731, 3379
HspAI GCGC 3 cut(s) 50, 2920, 3388
Ksp22I TGATCA 6 cut(s) 1237, 1363, 1408, 2575, 2620, 3250
LguI GCTCTTC 1 cut(s) 760
LmnI GCTCC 8 cut(s) 164, 1084, 2414, 2978, 3373, 3385, 3397, 3418
Lsp1109I GCAGC 5 cut(s) 733, 1773, 2827, 2836, 3476
MabI ACCWGGT 1 cut(s) 1248
MaeI CTAG 3 cut(s) 1949, 2091, 2232
MaeII ACGT 4 cut(s) 594, 2524, 2731, 3379
MfeI CAATTG 2 cut(s) 154, 1573
MflI RGATCY 5 cut(s) 425, 785, 1951, 2639, 2958
MhlI GDGCHC 2 cut(s) 393, 1063
MmeI TCCRAC 3 cut(s) 213, 947, 2299
Mph1103I ATGCAT 2 cut(s) 1373, 2892
MroXI GAANNNNTTC 5 cut(s) 714, 1488, 1627, 1909, 2763
MslI CAYNNNNRTG 5 cut(s) 1029, 2583, 2700, 2703, 3246
MspA1I CMGCKG 3 cut(s) 684, 2441, 3467
MspI CCGG 2 cut(s) 162, 323
MspR9I CCNGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
MunI CAATTG 2 cut(s) 154, 1573
Mva1269I GAATGC 2 cut(s) 2086, 2802
MvaI CCWGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
MwoI GCNNNNNNNGC 9 cut(s) 56, 62, 156, 750, 779, 2549, 2821, 2824, 3484
NdeI CATATG 3 cut(s) 853, 1957, 3144
NlaIV GGNNCC 5 cut(s) 1061, 1737, 3119, 3399, 3420
NmuCI GTSAC 9 cut(s) 248, 254, 260, 541, 1327, 1543, 1713, 1928, 2018
NsiI ATGCAT 2 cut(s) 1373, 2892
NspI RCATGY 3 cut(s) 748, 2611, 3245
PaeI GCATGC 1 cut(s) 748
PciI ACATGT 1 cut(s) 2607
PciSI GCTCTTC 1 cut(s) 760
PcsI WCGNNNNNNNCGW 1 cut(s) 482
PctI GAATGC 2 cut(s) 2086, 2802
PdmI GAANNNNTTC 5 cut(s) 714, 1488, 1627, 1909, 2763
PflMI CCANNNNNTGG 1 cut(s) 443
PfoI TCCNGGA 1 cut(s) 634
PkrI GCNGC 6 cut(s) 58, 723, 1788, 2817, 2826, 3466
PpuMI RGGWCCY 1 cut(s) 1735
PscI ACATGT 1 cut(s) 2607
PshBI ATTAAT 2 cut(s) 2562, 2871
PsiI TTATAA 2 cut(s) 1830, 2175
Psp5II RGGWCCY 1 cut(s) 1735
Psp6I CCWGG 8 cut(s) 634, 705, 748, 807, 1011, 1248, 1655, 2075
PspEI GGTNACC 1 cut(s) 1713
PspFI CCCAGC 2 cut(s) 2063, 2210
PspGI CCWGG 8 cut(s) 634, 705, 748, 807, 1011, 1248, 1655, 2075
PspN4I GGNNCC 5 cut(s) 1061, 1737, 3119, 3399, 3420
PspOMI GGGCCC 1 cut(s) 1059
PspPI GGNCC 7 cut(s) 582, 1059, 1060, 1735, 2780, 3118, 3190
PspPPI RGGWCCY 1 cut(s) 1735
PstNI CAGNNNCTG 1 cut(s) 878
PsuI RGATCY 5 cut(s) 425, 785, 1951, 2639, 2958
PvuII CAGCTG 3 cut(s) 684, 2441, 3467
RsaI GTAC 2 cut(s) 695, 2751
RsaNI GTAC 2 cut(s) 694, 2750
RseI CAYNNNNRTG 5 cut(s) 1029, 2583, 2700, 2703, 3246
SapI GCTCTTC 1 cut(s) 760
SatI GCNGC 6 cut(s) 57, 722, 1787, 2816, 2825, 3465
Sau96I GGNCC 7 cut(s) 582, 1059, 1060, 1735, 2780, 3118, 3190
ScaI AGTACT 1 cut(s) 695
ScrFI CCNGG 8 cut(s) 636, 707, 750, 809, 1013, 1250, 1657, 2077
SduI GDGCHC 2 cut(s) 393, 1063
SexAI ACCWGGT 1 cut(s) 1248
SfcI CTRYAG 1 cut(s) 1618
SinI GGWCC 4 cut(s) 582, 1735, 2780, 3118
SmiMI CAYNNNNRTG 5 cut(s) 1029, 2583, 2700, 2703, 3246
SmlI CTYRAG 1 cut(s) 420
SmoI CTYRAG 1 cut(s) 420
SpeI ACTAGT 1 cut(s) 2231
SphI GCATGC 1 cut(s) 748
SsiI CCGC 3 cut(s) 57, 503, 1800
SspI AATATT 1 cut(s) 2381
SspMI CTAG 3 cut(s) 1949, 2091, 2232
StyD4I CCNGG 8 cut(s) 634, 705, 748, 807, 1011, 1248, 1655, 2075
StyI CCWWGG 1 cut(s) 572
TaiI ACGT 4 cut(s) 597, 2527, 2734, 3382
TaqI TCGA 9 cut(s) 45, 547, 565, 2236, 2401, 2598, 2930, 2990, 3151
TaqII GACCGA 2 cut(s) 1148, 3135
TatI WGTACW 1 cut(s) 693
TauI GCSGC 1 cut(s) 59
TseFI GTSAC 9 cut(s) 248, 254, 260, 541, 1327, 1543, 1713, 1928, 2018
TseI GCWGC 5 cut(s) 721, 1786, 2815, 2824, 3464
Tsp45I GTSAC 9 cut(s) 248, 254, 260, 541, 1327, 1543, 1713, 1928, 2018
TspGWI ACGGA 1 cut(s) 852
Van91I CCANNNNNTGG 1 cut(s) 443
VpaK11BI GGWCC 4 cut(s) 582, 1735, 2780, 3118
VspI ATTAAT 2 cut(s) 2562, 2871
XapI RAATTY 9 cut(s) 761, 970, 1516, 1762, 1907, 2744, 2762, 3107, 3546
XceI RCATGY 3 cut(s) 748, 2611, 3245
XcmI CCANNNNNNNNNTGG 2 cut(s) 460, 592
XmiI GTMKAC 1 cut(s) 495
XmnI GAANNNNTTC 5 cut(s) 714, 1488, 1627, 1909, 2763
XspI CTAG 3 cut(s) 1949, 2091, 2232
ZrmI AGTACT 1 cut(s) 695
Zsp2I ATGCAT 2 cut(s) 1373, 2892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.