Rw4G022320

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0004701
Physical Location & Seq
Forward (+)
47679315 .. 47685910
6596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G022320.1

Sequence Viewer

Length: 3543 bp
ATGGCAGATTTGGACGACGATTTCGGAGACATCTACACTGATGTCGAAGCGCAGGCCGCTTCAGCCATCAACGGCGTATCGGACTTCGCGCAGTTCTATACAGAACCCGAAGACCAGCAAGATAGAAATGATAGTAACAACAATGCAAAGAACGGCAAGGGTTTCGTCTCCGATTCTAAGAAACCCAAAGAGGAATTGGGTGGTAACGTTTCGGGTTCGGAGTCGGATGAGGATTACAGTGACAGTGAGGATGACCTGAATATAGTTTTGAACGATGGGGGTTGTAAAGGTATTCCCTTTCCGGTTTCAGGTGGAGGGAGCATGAGGGTTGATGATTATGAAGATGAGGATGATGATGCTCTTGTGCCCATGAAAGATTGCAAGTATGTATGGACTCAAGGATCTACTTGTCCAAGCAATGGAAAAGCCAATGAGTCTTTGGATTTGGTGTCGCCTATACCGTTTGGAGGAGACCACTCGCAGATTAGTCGTGTTCGTGATACACCTAATCCAGTGGTGATTCGAAATAGATATGGTTTTCGACTTCCTTGGTATAGGACCATACTGGACGTGGATATTGAATCATTTGAGGAGAAGTCATGGAGGTATCCTGAAGTTGATATAACAGATTACTTCAATTTTGATTTGAACGAGGACAGCTGGAAAGAGTACTGCAACTCCCTGGAACAACTTCGGCAGCTGAAATCCACACAGTATGGCATGCCTGGCTCTTCAAAATTTTATCAGGCTAAAGAACCTGGATCTGAGTATGGCAGATTCACCCAGGAAACTATGCCTAAAGAAATGAATTATGCTGGATCATGGACATATGCTCCTCCGTCATCAAAAGTTTCTGATTTCAGACCAAAAGGGAAAGCAATTCAGATAGAAGATAGTGTTGTTGAACGCCAACCATCTTTTGATAGTAGGCATCCACGAAGTTGGAATTCTGATGTTGTGATACAGATTTCTGTGCATGATCCCACCCAGGAAACCTCCCATTCTGGTGAGGAACATGGGCATACAAATAGCAGGGCCCATGAGACATCTGAAAATGGGGAGCTTGATGCAAATGGAAACCAAAACAATATCTCATATAATACTACGACCGATGATGATTCATCATTAGGAAGTCCAGAAGCAAACACAAGAAAATTAGACAGATGTTCCCAGAAGATCAGTGCATCCCATTCAATGACAATAGACTCCGATGATCACGGTAACCAGGTCATTGGTTTTGATGGGGATAACCATAAGGAGGTGAATGGTATCTCATTGGAGGCCATTGAAATTGCAAATAAAGTGACAGAAAGTCTTGACAGGAATACTTCCTGTGCTGATCAATGCATGATGGAGACACTATTATTGGTGAGTGATGGCGATGATCAACTTAGTCTCATTTCATCATGTTTTGCATCTGATTCTGAAGCTTCCAAGAACAGTGTTCATTTTGATCCAGAAGATATTCATACTCCTGTAAGCCCTGTGGTGAATTCACACACTGAACCATGCAAGCCTGTCACATCATCTTTTAAGAACTCAAAAAGCAATTGCATCAAAAGAAAAAGAGTTGATATCCAAGATTATTCCATCTGTAGAAGTTCTTCTCAAAAGAAGCATAATCATCAGGCCAGGAGGCTTAATGGTGTTGATGAACCAAGTAAGCACAGAAACGACAATGATAGGTCACCCACCTCAGATACAGAGGACCCATATAACAGGAATTGCTCAGAGAATTTTCGTGGACAGAAGGACAGGCTGCGAGATTCTGGCGGTAGTAACAGAGAAGATAGTCCAGATTATAAAGAACCAAAGTTTTCCTGCCATTATGGTATTAGATATGATGATAACCATCATCGGAATCAAAGAGATAAGAGAAAATTTTCAAGTAGAAAAGGTAGTCACCTGTTCCAAGAGAAACTAGATCCATATGCGAAAAGAACTTTTAATGGAAGGCAGACTTTCTGTGAAGATAAGGATAGAGATTGGAGTCACTTTGGAAGAATGCAGTTCACTGAAGAGAGGAGTCCTCTCCCCAGCAGGGAGTCCAGGGGGTTGCATTCTAGGTGTTCCTCCACTGTTGAGGAAAGGGGTGCTCAATGGGGAAGGAATAGCAACAAACTGCTATTTAAGAAAATATCCAATTATAAGTGGCATGAAGACGATTTTCTGGGAGAAAAAGCTGGGAGATACGCATCATTCACTAGTCGAAAAAGGAATAATTTTGATGACTTTGATGAGAGGCGGTTGCCACCCGTCAGGAGAGAATTAAGTAACTGGGGTCGAAGGGGTGGATATGTGGACAGTCCCATTTATTTGGATGATTCACACTCTGAGCAATTTGAAGATGAATATTGCAAACACAGAGAAAATCGAGACTGCTCCCATCAGTCTTACAGAGACTTATATACAGCTGATGAAGGAAGCTGGAATCTCTCCATATCACCAAGAAATGAAGTTTCTTACCCAAGAACAAGTGATGAAAGATATTGGAGACGTGTGAGAAAAATAGATGCCGAAGAAGCCAATCAGATTAATTGGTTTGATGATCACCATGATGCTTATGAAATCGAAGATAACATGTATCGTAATGATCATTTAAGGTGGAGAAGATCTAACTGGCAATCTGAAGTTATGCACTGGACTGAAGACCAGTTTACTTTCAGACATCACGGTAATGAATTGTATTCTGAGAAAGCATCACGTTCTTATCAGAAATTTGTACGGCGTGAAAAATTTCATGCTAAATATGGTCCTCTGCATGATGGAATGCCTATTGATATTATACAGCCAGAGCAGCATGGATTGAAAATGGCCAGAAAAGGAGTTGGTGCTAACTTTATTAATAGAAGTGCTAAGATGCATAGAGTTAAGCATGAGCAGACGTTGAGGCGCAGGGATTCGATGGACTTGGCTGTTAGGGAACAAAAGATCTCTGCAAGATGCTCCAAAGCCAGATTTTCGATATGCAATGGTAGGCCAGAAAGTATGGGTGCAGAGATTAGTGGAGAGGGGATAACCTCAGGGAAATCACAGTCGTGTGAATCTGAGAAGGCGAGGGCAGTAGAAAACACCCAAAAATTTGCATGGGACCGAAACAATGAGAAAGGGCATCATATGTTTCCAGTTACAAATCAAAATGCTGATTTGGATATAGAGGAGGGCCAGATTGTAATACAAGAACAGAATACAGCAAATCCTTTGCAGGGAAAACATGCTTATGATCACACAGCACCAGCCCACAGCGTGAAAAAGAGAATGTTTGATTGTCATAATGCTTCCAATGGGAATCAGGTTGTAGAAGGATATGACAAACAAAAGATTCTTCAGACAATGGCTAAAATGGAGCAACGTGAGGAGCGCTTTAAGGAGCCGATCACCTTAAAAAAGGAGCCAGACAAGTTGTTCAAGCCTGAGGTTGATCCCACAGTTCAAGCAGCTGAAGAAAAGCAACATAGGCCAGCCCGAAAGAGGCAGTGGGGTGGTAGGTTCTCAAAGAACGACTCTCTAATGTTGGGAATTCCATTGAAAGCAAGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1180

Amino Acids

135.72

Weight (kDa)

5.83

Isoelectric Point (pI)

51.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 190 - 232 6.1e-18 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1803, 2148
AccB7I CCANNNNNTGG 1 cut(s) 419
AccII CGCG 1 cut(s) 89
AciI CCGC 3 cut(s) 57, 1773, 2245
AclI AACGTT 1 cut(s) 207
AclWI GGATC 7 cut(s) 409, 769, 826, 974, 1448, 1919, 3416
AcoI YGGCCR 1 cut(s) 2814
AcsI RAATTY 9 cut(s) 737, 946, 1492, 1735, 1880, 2717, 2735, 3080, 3519
AcuI CTGAAG 8 cut(s) 45, 633, 1446, 2037, 2649, 2667, 3311, 3462
AdeI CACNNNGTG 1 cut(s) 3247
AfaI GTAC 2 cut(s) 671, 2724
AfeI AGCGCT 1 cut(s) 3362
AfiI CCNNNNNNNGG 7 cut(s) 308, 419, 467, 1258, 2041, 3206, 3471
AflIII ACRYGT 2 cut(s) 2497, 2580
AhdI GACNNNNNGTC 1 cut(s) 1311
AhlI ACTAGT 1 cut(s) 2204
AjiI CACGTC 2 cut(s) 571, 2498
AjnI CCWGG 8 cut(s) 681, 724, 757, 783, 987, 1224, 1631, 2048
AleI CACNNNNGTG 1 cut(s) 3037
AluBI AGCT 8 cut(s) 660, 700, 1063, 1430, 2183, 2414, 2427, 3440
AluI AGCT 8 cut(s) 660, 700, 1063, 1430, 2183, 2414, 2427, 3440
Alw21I GWGCWC 1 cut(s) 2098
Alw26I GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2370, 2394, 2488
AlwI GGATC 7 cut(s) 409, 769, 826, 974, 1448, 1919, 3416
Aor51HI AGCGCT 1 cut(s) 3362
AoxI GGCC 8 cut(s) 54, 1035, 1281, 1629, 2814, 2978, 3163, 3458
ApaI GGGCCC 1 cut(s) 1039
ApeKI GCWGC 4 cut(s) 697, 1759, 2797, 3437
ApoI RAATTY 9 cut(s) 737, 946, 1492, 1735, 1880, 2717, 2735, 3080, 3519
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 2 cut(s) 2535, 2844
Asp700I GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1882, 2736
AspLEI GCGC 4 cut(s) 52, 91, 2895, 3363
AspS9I GGNCC 7 cut(s) 558, 1035, 1036, 1708, 2753, 3091, 3163
AsuII TTCGAA 1 cut(s) 523
AvaII GGWCC 4 cut(s) 558, 1708, 2753, 3091
AxyI CCTNAGG 2 cut(s) 3022, 3414
BaeGI GKGCMC 2 cut(s) 369, 1039
BalI TGGCCA 1 cut(s) 2816
BanII GRGCYC 1 cut(s) 1039
BarI GAAGNNNNNNTAC 2 cut(s) 1588, 1620
BbsI GAAGAC 3 cut(s) 117, 2166, 2655
Bbv12I GWGCWC 1 cut(s) 2098
BbvI GCAGC 4 cut(s) 709, 1746, 2809, 3449
BceAI ACGGC 3 cut(s) 88, 169, 2741
BcgI CGANNNNNNTGC 4 cut(s) 145, 179, 470, 504
BciT130I CCWGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 6 cut(s) 1213, 1339, 1384, 2548, 2593, 3223
BcoDI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2370, 2394, 2488
BcuI ACTAGT 1 cut(s) 2204
BfaI CTAG 3 cut(s) 1922, 2064, 2205
BfmI CTRYAG 1 cut(s) 1594
BfoI RGCGCY 1 cut(s) 3364
BfuI GTATCC 1 cut(s) 618
BglII AGATCT 2 cut(s) 2612, 2931
BisI GCNGC 5 cut(s) 57, 698, 1760, 2798, 3438
BlsI GCNGC 5 cut(s) 58, 699, 1761, 2799, 3439
BmcAI AGTACT 1 cut(s) 671
Bme1390I CCNGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
Bme18I GGWCC 4 cut(s) 558, 1708, 2753, 3091
BmeRI GACNNNNNGTC 1 cut(s) 1311
BmgBI CACGTC 2 cut(s) 571, 2498
BmgT120I GGNCC 7 cut(s) 558, 1035, 1036, 1708, 2753, 3091, 3163
BmiI GGNNCC 5 cut(s) 1037, 1710, 3092, 3372, 3393
BmrFI CCNGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
BmrI ACTGGG 1 cut(s) 2287
BmuI ACTGGG 1 cut(s) 2287
BpiI GAAGAC 3 cut(s) 117, 2166, 2655
BplI GAGNNNNNCTC 2 cut(s) 2014, 2046
Bpu14I TTCGAA 1 cut(s) 523
BpuEI CTTGAG 1 cut(s) 381
BsaBI GATNNNNATC 2 cut(s) 1851, 2194
BsaI GGTCTC 1 cut(s) 465
BsaJI CCNNGG 5 cut(s) 548, 681, 783, 987, 2049
BsaWI WCCGGW 1 cut(s) 301
BsaXI ACNNNNNCTCC 4 cut(s) 662, 692, 817, 847
Bsc4I CCNNNNNNNGG 7 cut(s) 308, 419, 467, 1258, 2041, 3206, 3471
Bse1I ACTGG 7 cut(s) 512, 570, 2282, 2624, 2645, 2653, 3125
Bse21I CCTNAGG 2 cut(s) 3022, 3414
Bse3DI GCAATG 2 cut(s) 424, 2977
Bse8I GATNNNNATC 2 cut(s) 1851, 2194
BseBI CCWGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
BseDI CCNNGG 5 cut(s) 548, 681, 783, 987, 2049
BseGI GGATG 6 cut(s) 232, 256, 355, 931, 1184, 2326
BseJI GATNNNNATC 2 cut(s) 1851, 2194
BseLI CCNNNNNNNGG 7 cut(s) 308, 419, 467, 1258, 2041, 3206, 3471
BseMI GCAATG 2 cut(s) 424, 2977
BseMII CTCAG 8 cut(s) 756, 1710, 1743, 2325, 2682, 3036, 3039, 3405
BseNI ACTGG 7 cut(s) 512, 570, 2282, 2624, 2645, 2653, 3125
BseRI GAGGAG 6 cut(s) 483, 605, 825, 2038, 3173, 3371
BseSI GKGCMC 2 cut(s) 369, 1039
BseXI GCAGC 4 cut(s) 709, 1746, 2809, 3449
BseYI CCCAGC 2 cut(s) 2036, 2183
BsgI GTGCAG 1 cut(s) 3015
Bsh1236I CGCG 1 cut(s) 89
Bsh1285I CGRYCG 1 cut(s) 1110
BshFI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2816, 2980, 3165, 3460
BsiEI CGRYCG 1 cut(s) 1110
BsiHKAI GWGCWC 1 cut(s) 2098
BsiSI CCGG 1 cut(s) 302
BslFI GGGAC 2 cut(s) 2292, 3104
BslI CCNNNNNNNGG 7 cut(s) 308, 419, 467, 1258, 2041, 3206, 3471
BsmAI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2370, 2394, 2488
BsmBI CGTCTC 2 cut(s) 172, 2488
BsmFI GGGAC 2 cut(s) 2292, 3104
BsmI GAATGC 3 cut(s) 2010, 2059, 2775
BsnI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2816, 2980, 3165, 3460
Bso31I GGTCTC 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 523
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 3 cut(s) 369, 1039, 2098
BspACI CCGC 3 cut(s) 57, 1773, 2245
BspANI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2816, 2980, 3165, 3460
BspCNI CTCAG 8 cut(s) 757, 1709, 1742, 2326, 2683, 3035, 3040, 3406
BspFNI CGCG 1 cut(s) 89
BspLI GGNNCC 5 cut(s) 1037, 1710, 3092, 3372, 3393
BspPI GGATC 7 cut(s) 409, 769, 826, 974, 1448, 1919, 3416
BspQI GCTCTTC 1 cut(s) 736
BspT104I TTCGAA 1 cut(s) 523
BspTNI GGTCTC 1 cut(s) 465
BsrDI GCAATG 2 cut(s) 424, 2977
BsrI ACTGG 7 cut(s) 512, 570, 2282, 2624, 2645, 2653, 3125
BssECI CCNNGG 5 cut(s) 548, 681, 783, 987, 2049
BssT1I CCWWGG 1 cut(s) 548
Bst2UI CCWGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
Bst6I CTCTTC 2 cut(s) 736, 2013
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 4 cut(s) 54, 722, 1514, 3462
BstEII GGTNACC 2 cut(s) 1220, 1686
BstF5I GGATG 6 cut(s) 232, 256, 355, 931, 1184, 2326
BstFNI CGCG 1 cut(s) 89
BstH2I RGCGCY 1 cut(s) 3364
BstHHI GCGC 4 cut(s) 52, 91, 2895, 3363
BstMAI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2370, 2394, 2488
BstMCI CGRYCG 1 cut(s) 1110
BstMWI GCNNNNNNNGC 6 cut(s) 56, 62, 726, 2522, 2797, 3457
BstNI CCWGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
BstNSI RCATGY 3 cut(s) 724, 2584, 3218
BstPI GGTNACC 2 cut(s) 1220, 1686
BstSCI CCNGG 8 cut(s) 681, 724, 757, 783, 987, 1224, 1631, 2048
BstSFI CTRYAG 1 cut(s) 1594
BstSLI GKGCMC 2 cut(s) 369, 1039
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 4 cut(s) 709, 1746, 2809, 3449
BstV2I GAAGAC 3 cut(s) 117, 2166, 2655
BstX2I RGATCY 5 cut(s) 401, 761, 1924, 2612, 2931
BstXI CCANNNNNNTGG 3 cut(s) 942, 1232, 2317
BstYI RGATCY 5 cut(s) 401, 761, 1924, 2612, 2931
Bsu36I CCTNAGG 2 cut(s) 3022, 3414
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2816, 2980, 3165, 3460
BtgZI GCGATG 1 cut(s) 1395
BtrI CACGTC 2 cut(s) 571, 2498
BtsCI GGATG 6 cut(s) 232, 256, 355, 931, 1184, 2326
BtsI GCAGTG 1 cut(s) 3482
Cac8I GCNNGC 4 cut(s) 54, 722, 1514, 3462
CfoI GCGC 4 cut(s) 52, 91, 2895, 3363
Cfr13I GGNCC 7 cut(s) 558, 1035, 1036, 1708, 2753, 3091, 3163
CsiI ACCWGGT 1 cut(s) 1224
Csp6I GTAC 2 cut(s) 670, 2723
CviQI GTAC 2 cut(s) 670, 2723
DraIII CACNNNGTG 1 cut(s) 3247
DriI GACNNNNNGTC 1 cut(s) 1311
EaeI YGGCCR 1 cut(s) 2814
Eam1104I CTCTTC 2 cut(s) 736, 2013
Eam1105I GACNNNNNGTC 1 cut(s) 1311
EarI CTCTTC 2 cut(s) 736, 2013
Eco130I CCWWGG 1 cut(s) 548
Eco24I GRGCYC 1 cut(s) 1039
Eco31I GGTCTC 1 cut(s) 465
Eco32I GATATC 1 cut(s) 1576
Eco47I GGWCC 4 cut(s) 558, 1708, 2753, 3091
Eco47III AGCGCT 1 cut(s) 3362
Eco57I CTGAAG 8 cut(s) 45, 633, 1446, 2037, 2649, 2667, 3311, 3462
Eco81I CCTNAGG 2 cut(s) 3022, 3414
Eco91I GGTNACC 2 cut(s) 1220, 1686
EcoO109I RGGNCCY 2 cut(s) 1035, 1708
EcoO65I GGTNACC 2 cut(s) 1220, 1686
EcoRI GAATTC 3 cut(s) 946, 1492, 3519
EcoRII CCWGG 8 cut(s) 681, 724, 757, 783, 987, 1224, 1631, 2048
EcoRV GATATC 1 cut(s) 1576
EcoT14I CCWWGG 1 cut(s) 548
EcoT22I ATGCAT 2 cut(s) 1349, 2865
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 1 cut(s) 548
Esp3I CGTCTC 2 cut(s) 172, 2488
FalI AAGNNNNNCTT 2 cut(s) 1945, 1977
FaqI GGGAC 2 cut(s) 2292, 3104
FauNDI CATATG 3 cut(s) 829, 1930, 3117
FbaI TGATCA 6 cut(s) 1213, 1339, 1384, 2548, 2593, 3223
Fnu4HI GCNGC 5 cut(s) 57, 698, 1760, 2798, 3438
FokI GGATG 6 cut(s) 239, 263, 362, 918, 1171, 2333
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 5 cut(s) 57, 698, 1760, 2798, 3438
FspBI CTAG 3 cut(s) 1922, 2064, 2205
GlaI GCGC 4 cut(s) 51, 90, 2894, 3362
GluI GCNGC 5 cut(s) 57, 698, 1760, 2798, 3438
GsaI CCCAGC 2 cut(s) 2040, 2187
HaeII RGCGCY 1 cut(s) 3364
HaeIII GGCC 8 cut(s) 56, 1037, 1283, 1631, 2816, 2980, 3165, 3460
HapII CCGG 1 cut(s) 302
HhaI GCGC 4 cut(s) 52, 91, 2895, 3363
Hin6I GCGC 4 cut(s) 50, 89, 2893, 3361
HinP1I GCGC 4 cut(s) 50, 89, 2893, 3361
HindIII AAGCTT 1 cut(s) 1428
HpaII CCGG 1 cut(s) 302
Hpy166II GTNNAC 4 cut(s) 1745, 2013, 2302, 2658
Hpy188III TCNNGA 8 cut(s) 497, 611, 1136, 1316, 1457, 1796, 2260, 2375
Hpy8I GTNNAC 4 cut(s) 1745, 2013, 2302, 2658
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 7 cut(s) 1744, 1947, 2100, 2280, 2414, 3046, 3296
HpyCH4IV ACGT 6 cut(s) 207, 570, 2497, 2704, 2885, 3352
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 62, 726, 2522, 2797, 3457
HpySE526I ACGT 6 cut(s) 207, 570, 2497, 2704, 2885, 3352
HspAI GCGC 4 cut(s) 50, 89, 2893, 3361
Ksp22I TGATCA 6 cut(s) 1213, 1339, 1384, 2548, 2593, 3223
LguI GCTCTTC 1 cut(s) 736
LmnI GCTCC 9 cut(s) 318, 838, 1060, 2387, 2951, 3346, 3358, 3370, 3391
Lsp1109I GCAGC 4 cut(s) 709, 1746, 2809, 3449
MabI ACCWGGT 1 cut(s) 1224
MaeI CTAG 3 cut(s) 1922, 2064, 2205
MaeII ACGT 6 cut(s) 207, 570, 2497, 2704, 2885, 3352
MfeI CAATTG 1 cut(s) 1549
MflI RGATCY 5 cut(s) 401, 761, 1924, 2612, 2931
MhlI GDGCHC 3 cut(s) 369, 1039, 2098
MlsI TGGCCA 1 cut(s) 2816
MluNI TGGCCA 1 cut(s) 2816
MlyI GAGTC 8 cut(s) 230, 388, 443, 1199, 1999, 2035, 2054, 3497
MmeI TCCRAC 2 cut(s) 204, 923
Mox20I TGGCCA 1 cut(s) 2816
Mph1103I ATGCAT 2 cut(s) 1349, 2865
MroXI GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1882, 2736
MscI TGGCCA 1 cut(s) 2816
MslI CAYNNNNRTG 5 cut(s) 1005, 2556, 2676, 3037, 3219
Msp20I TGGCCA 1 cut(s) 2816
MspA1I CMGCKG 4 cut(s) 660, 700, 2414, 3440
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
MunI CAATTG 1 cut(s) 1549
Mva1269I GAATGC 3 cut(s) 2010, 2059, 2775
MvaI CCWGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 6 cut(s) 56, 62, 726, 2522, 2797, 3457
NdeI CATATG 3 cut(s) 829, 1930, 3117
NlaIV GGNNCC 5 cut(s) 1037, 1710, 3092, 3372, 3393
NmuCI GTSAC 6 cut(s) 239, 1303, 1519, 1686, 1901, 1991
NsiI ATGCAT 2 cut(s) 1349, 2865
NspI RCATGY 3 cut(s) 724, 2584, 3218
NspV TTCGAA 1 cut(s) 523
OliI CACNNNNGTG 1 cut(s) 3037
PaeI GCATGC 1 cut(s) 724
PciI ACATGT 1 cut(s) 2580
PciSI GCTCTTC 1 cut(s) 736
PcsI WCGNNNNNNNCGW 1 cut(s) 458
PctI GAATGC 3 cut(s) 2010, 2059, 2775
PdmI GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1882, 2736
PflMI CCANNNNNTGG 1 cut(s) 419
PkrI GCNGC 5 cut(s) 58, 699, 1761, 2799, 3439
PleI GAGTC 8 cut(s) 229, 388, 442, 1199, 1998, 2034, 2053, 3497
PpsI GAGTC 8 cut(s) 229, 388, 442, 1199, 1998, 2034, 2053, 3497
PpuMI RGGWCCY 1 cut(s) 1708
PscI ACATGT 1 cut(s) 2580
PshBI ATTAAT 2 cut(s) 2535, 2844
PsiI TTATAA 2 cut(s) 1803, 2148
Psp1406I AACGTT 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 1708
Psp6I CCWGG 8 cut(s) 681, 724, 757, 783, 987, 1224, 1631, 2048
PspEI GGTNACC 2 cut(s) 1220, 1686
PspFI CCCAGC 2 cut(s) 2036, 2183
PspGI CCWGG 8 cut(s) 681, 724, 757, 783, 987, 1224, 1631, 2048
PspN4I GGNNCC 5 cut(s) 1037, 1710, 3092, 3372, 3393
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 7 cut(s) 558, 1035, 1036, 1708, 2753, 3091, 3163
PspPPI RGGWCCY 1 cut(s) 1708
PsuI RGATCY 5 cut(s) 401, 761, 1924, 2612, 2931
PvuII CAGCTG 4 cut(s) 660, 700, 2414, 3440
RsaI GTAC 2 cut(s) 671, 2724
RsaNI GTAC 2 cut(s) 670, 2723
RseI CAYNNNNRTG 5 cut(s) 1005, 2556, 2676, 3037, 3219
SapI GCTCTTC 1 cut(s) 736
SatI GCNGC 5 cut(s) 57, 698, 1760, 2798, 3438
Sau96I GGNCC 7 cut(s) 558, 1035, 1036, 1708, 2753, 3091, 3163
ScaI AGTACT 1 cut(s) 671
SchI GAGTC 8 cut(s) 230, 388, 443, 1199, 1999, 2035, 2054, 3497
ScrFI CCNGG 8 cut(s) 683, 726, 759, 785, 989, 1226, 1633, 2050
SduI GDGCHC 3 cut(s) 369, 1039, 2098
SexAI ACCWGGT 1 cut(s) 1224
SfcI CTRYAG 1 cut(s) 1594
SfuI TTCGAA 1 cut(s) 523
SinI GGWCC 4 cut(s) 558, 1708, 2753, 3091
SmiMI CAYNNNNRTG 5 cut(s) 1005, 2556, 2676, 3037, 3219
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
SpeI ACTAGT 1 cut(s) 2204
SphI GCATGC 1 cut(s) 724
SsiI CCGC 3 cut(s) 57, 1773, 2245
SspI AATATT 1 cut(s) 2354
SspMI CTAG 3 cut(s) 1922, 2064, 2205
StyD4I CCNGG 8 cut(s) 681, 724, 757, 783, 987, 1224, 1631, 2048
StyI CCWWGG 1 cut(s) 548
TaiI ACGT 6 cut(s) 210, 573, 2500, 2707, 2888, 3355
TaqI TCGA 9 cut(s) 45, 523, 541, 2209, 2284, 2374, 2571, 2903, 2963
TaqII GACCGA 2 cut(s) 1124, 3108
TatI WGTACW 1 cut(s) 669
TauI GCSGC 1 cut(s) 59
TseFI GTSAC 6 cut(s) 239, 1303, 1519, 1686, 1901, 1991
TseI GCWGC 4 cut(s) 697, 1759, 2797, 3437
Tsp45I GTSAC 6 cut(s) 239, 1303, 1519, 1686, 1901, 1991
TspGWI ACGGA 1 cut(s) 828
Van91I CCANNNNNTGG 1 cut(s) 419
VpaK11BI GGWCC 4 cut(s) 558, 1708, 2753, 3091
VspI ATTAAT 2 cut(s) 2535, 2844
XapI RAATTY 9 cut(s) 737, 946, 1492, 1735, 1880, 2717, 2735, 3080, 3519
XceI RCATGY 3 cut(s) 724, 2584, 3218
XcmI CCANNNNNNNNNTGG 3 cut(s) 193, 436, 568
XmnI GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1882, 2736
XspI CTAG 3 cut(s) 1922, 2064, 2205
ZrmI AGTACT 1 cut(s) 671
Zsp2I ATGCAT 2 cut(s) 1349, 2865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.