Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004701

Physical Location & Seq

Genomic Coordinates Reverse (-)

9329997 .. 9333450

Gene Structure 3454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g13090.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGGAGGATTTTGATGATGATTTCGGGGATTTATATGCCGGCGTCGAAGCGCAGGCCAATTCGGCCATCAATGGCGCACCGGACTTCGCTCACTTTTACACAGAACCAGAAGAAGATGTCATTGAGGATAATGGAAAGGTCAAAACCGCTAGTCCTGGAACCGATTCGAAGAAATCCGATTCTGACTGCGAGGAGTTGGGCGAGAAAGTTTCTGCTTTGGAGGAGAATGAGGATTACAGTGGAAGTGATAGCGAGGATGACCTGAAAATAGTGCTGAATGATGAGGACTGCGAGGGCAAAGTGTTTCCAAATGGCGGCCGAGGGCGCGTGAAGAATGATGAGCATGAGGATGAGGATGGTGATGGGTTTCCGGCTACGAAAGAGTATAAGTACATAAGGACTCAAGGACTAACTTCTCTAAGCAATGGAAAAGGCAGTGAGGCTGTGGGTTCAGCGTCTTCCATGTCGGTTAGAGGAGACCATGAAAATAGTTTGTGCTATCAACGCAAGGGTTTGAGCTCTCAGATTAGTTGTATTGGTGATACACCTAATCAAATGGTGCCTCAAAATAGATATGGTTTCAGACTTCCTTGGTACCGGACCATACTTGACGTCAACGTTGAATCGTTTGAGGAGAAGCCATGGAGGTATCCTGAGGTTGATGTAACAGACTATTTCAATTTCGGTTTGAAAGAGGACAGTTGGAAACAGTACTGTATCTCCCTGGAACAACTACGGCTAACATCTATGCAGTTTAGGATCCCTGTCTCAAGAGCTTCAAAACTTTATCAGCCAAAGGGAAGAGCAATTCAGATTGAAGATAGTATGGTTGAACGCCAACCATCTTTTGATGGTAGGCATCCACGTAGTTTGGATGCTGATGTTGTGATACAGATTGCGGTGCAGGACGGCACTGAGGAAACCACGAACTATGGTGAGGAACAGGGCCATACAAATTGTACGGCACGTGAGGCATCTGAAAATGGGGAATGTAATGCTAATGGTAACCGAACTATTCCTGCCAAAGAAGATGATTTATTGGTTGGAACTCCAGAAGGAAACACAAGGATAGCAGACAGTTGTTCCCGGAGGATCGGTCCCACTCATCCAATGACAATAGATTCTGATCAAAGAAATGACCAGTTTGTTGATCTGGATGGGTATGACTATAAGCAGGGGAATGCTGTCTCATTGGAGACTACAGAAATTACAAATAAAACAAATGACAGTGTTGGTGGGGATACTTTATATGTTGATCAATGCATGATGGAAGCACAATTATCACTTGGTGATGACAATCAACTTAGCCCCACTTCCTTTGCAAGTGATTCTGAGGCATCCAAGAATAGTGTTCATTTTGATCCAGAAGATATTAATACTCCTGCCACATCATCTTTTAAGAACCCAAAAGGCAATGGCATCAAGAGAAAAATAGTTGATATCAAAGATTACTCCATGCATAAAAGTCCTGCTCGAAAGGAGCATAAACATCAGCAAAGGAGGCTTGACAGTGTTGTTGAACCAAAGATTCACATTAAAGATGATGATGCGTCCCCTACCTCGGAAATGGACGACCTTTATGACAGGAATAACTTATTGGATTCTAGCAGACGGAAGAAAATTCTGCCAGATTTTGGCTGTAGTGATGGAGAAGATATTTCATATTATAAGGAATCAAGGCATTATGGTAGGAGACATGCTGACAACCATGTTCATACCGCTAAAACAAACTATTTGGACAGAAAAGGTAGTCACAATATCCAGGACAAGGTAAGTCCATATTTCAGAAAAAACTGGAATGAAAGGGAGTATTTTTGTGAAGATAGGGATACAGATTGGCATCGTTTTGGAAGAACACAATTCACTAACGAGAGGAGTCTTCTCCAGAACAGGGAGTCCAGGGGCTGGCACTCCAAGTATTCCCCACCCACTGTTAAAGAAAGGGATGCACAATTTAAAAGGAATGCCAACAAACTGCAGTTTAAGAAAATACCCAACCATGGTGGTGGCTGTTTCGGTTATAAACGTGAAGATGATGACTTTGTGGGAGAAAAATTTGGGAGATGTGCTTCATTTACTGGCCGAAAGAGGAATACTTTGGATGAATTTGATGAAAGGCAGTTTCCTCGGCTCAGGAGAGATTTAGGGGGAAGGGATGGATATGTTGACAAACCCGTTTTTGATTGGGATGATTCATGGTCTGGGAAAATTGAAGATGAATATTGCAGAAATGGAGAAAATCAATACTTGTCCAATCAGTTGTACAGAGATTTACACGCAGGTGAAGGAAGATGGAATGACTCTCCATCACCAAGAAATGATGTTTCTTACTCAATAACTGATGAAAGATATGGGAGACGTGAACGAGAAATATACTCTGCTGAATCCAAAGAGAGTAACTGGTTTGATCGATCGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Fip1

Protein Analysis

807

Amino Acids

92.13

Weight (kDa)

4.99

Isoelectric Point (pI)

44.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G66652 AT3G66652 AT3G66652
fragaria_vesca	FvH4_4g19650 FvH4_4g19650 FvH4_4g19650 FvH4_4g19650 FvH4_4g19650 FvH4_4g19650
malus_domestica	MD13G1154900.v1.1 MD16G1154500.v1.1
prunus_persica	Prupe.1G117900_v2.0.a1
pyrus_communis	pycom13g13170 pycom16g13090
rosa_chinensis	RchiOBHm_Chr4g0425101
rosa_laevigata	RLG00000007403 RLG00000007404 RLG00000007405 RLG00000007407
rosa_multiflora	Rmu_ssc0000420.1_g000015 Rmu_ssc0000420.1_g000026
rosa_roxburghii	Rroxscaffold_5G00367170
rosa_rugosa	Rorug04G0200900 Rorug04G0201400 Rorug04G0201400 Rorug04G0201500
rosa_samantha	Rh4AG258200 Rh4BG263800 Rh4CG274900 Rh4DG259700
rosa_wichuraiana	Rw4G022320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1668, 2022
AarI	CACCTGC	1 cut(s)	2270
AatII	GACGTC	1 cut(s)	615
Acc36I	ACCTGC	1 cut(s)	2270
Acc65I	GGTACC	1 cut(s)	594
AccB1I	GGYRCC	2 cut(s)	559, 594
AccB7I	CCANNNNNTGG	2 cut(s)	1634, 1905
AccII	CGCG	1 cut(s)	327
AciI	CCGC	4 cut(s)	147, 315, 899, 1719
AclI	AACGTT	1 cut(s)	618
AclWI	GGATC	4 cut(s)	754, 767, 1100, 1355
AcoI	YGGCCR	3 cut(s)	63, 316, 2080
AcsI	RAATTY	3 cut(s)	1620, 2054, 2105
AcvI	CACGTG	1 cut(s)	968
AcyI	GRCGYC	2 cut(s)	42, 612
AdeI	CACNNNGTG	1 cut(s)	1289
AfaI	GTAC	5 cut(s)	392, 596, 713, 961, 2264
AfiI	CCNNNNNNNGG	7 cut(s)	314, 1561, 1634, 1768, 1891, 1905, 2000
AgsI	TTSAA	8 cut(s)	623, 679, 691, 780, 818, 833, 1520, 2213
AjiI	CACGTC	1 cut(s)	2360
AjnI	CCWGG	4 cut(s)	154, 723, 1761, 1898
AjuI	GAANNNNNNNTTGG	2 cut(s)	1580, 1612
AleI	CACNNNNGTG	1 cut(s)	2280
AloI	GAACNNNNNNTCC	2 cut(s)	1880, 1912
AluBI	AGCT	2 cut(s)	519, 776
AluI	AGCT	2 cut(s)	519, 776
Alw21I	GWGCWC	1 cut(s)	521
Alw26I	GTCTC	6 cut(s)	471, 772, 1190, 1192, 1687, 2350
AlwI	GGATC	4 cut(s)	754, 767, 1100, 1355
AlwNI	CAGNNNCTG	1 cut(s)	1905
AoxI	GGCC	5 cut(s)	54, 63, 316, 946, 2080
ApoI	RAATTY	3 cut(s)	1620, 2054, 2105
AseI	ATTAAT	1 cut(s)	1374
Asp700I	GAANNNNTTC	1 cut(s)	163
Asp718I	GGTACC	1 cut(s)	594
AspLEI	GCGC	3 cut(s)	52, 77, 327
AspS9I	GGNCC	3 cut(s)	600, 946, 1097
AsuC2I	CCSGG	1 cut(s)	1087
AsuHPI	GGTGA	6 cut(s)	371, 551, 947, 1301, 2294, 2301
AsuII	TTCGAA	1 cut(s)	167
AvaII	GGWCC	2 cut(s)	600, 1097
AxyI	CCTNAGG	1 cut(s)	654
BamHI	GGATCC	1 cut(s)	759
BanI	GGYRCC	2 cut(s)	559, 594
BanII	GRGCYC	1 cut(s)	521
BbrPI	CACGTG	1 cut(s)	968
BbsI	GAAGAC	2 cut(s)	450, 1871
Bbv12I	GWGCWC	1 cut(s)	521
BceAI	ACGGC	3 cut(s)	752, 925, 978
BcgI	CGANNNNNNTGC	2 cut(s)	2108, 2142
BciT130I	CCWGG	4 cut(s)	156, 725, 1763, 1900
BciVI	GTATCC	3 cut(s)	660, 1234, 1822
BclI	TGATCA	2 cut(s)	1126, 1255
BcnI	CCSGG	1 cut(s)	1087
BcoDI	GTCTC	6 cut(s)	471, 772, 1190, 1192, 1687, 2350
BfaI	CTAG	2 cut(s)	150, 1605
BfmI	CTRYAG	3 cut(s)	1200, 1639, 1976
BfuAI	ACCTGC	1 cut(s)	2270
BfuI	GTATCC	3 cut(s)	660, 1234, 1822
BglI	GCCNNNNNGGC	1 cut(s)	62
BisI	GCNGC	1 cut(s)	316
BlsI	GCNGC	1 cut(s)	317
BmcAI	AGTACT	1 cut(s)	713
Bme1390I	CCNGG	5 cut(s)	156, 725, 1087, 1763, 1900
Bme18I	GGWCC	2 cut(s)	600, 1097
BmgBI	CACGTC	1 cut(s)	2360
BmgT120I	GGNCC	3 cut(s)	600, 946, 1097
BmiI	GGNNCC	5 cut(s)	160, 561, 596, 761, 1099
BmrFI	CCNGG	5 cut(s)	156, 725, 1087, 1763, 1900
BmsI	GCATC	8 cut(s)	865, 868, 983, 1346, 1428, 1537, 1849, 1936
BpiI	GAAGAC	2 cut(s)	450, 1871
BpmI	CTGGAG	2 cut(s)	1035, 1868
Bpu10I	CCTNAGC	1 cut(s)	2132
Bpu14I	TTCGAA	1 cut(s)	167
BpuEI	CTTGAG	2 cut(s)	387, 754
BpuMI	CCSGG	1 cut(s)	1087
Bsa29I	ATCGAT	1 cut(s)	2410
BsaAI	YACGTR	2 cut(s)	866, 968
BsaBI	GATNNNNATC	3 cut(s)	1125, 1296, 1839
BsaHI	GRCGYC	2 cut(s)	42, 612
BsaI	GGTCTC	1 cut(s)	471
BsaJI	CCNNGG	8 cut(s)	319, 590, 641, 723, 1560, 1899, 1999, 2126
BsaWI	WCCGGW	2 cut(s)	79, 597
BsaXI	ACNNNNNCTCC	4 cut(s)	704, 734, 1081, 1111
Bsc4I	CCNNNNNNNGG	7 cut(s)	314, 1561, 1634, 1768, 1891, 1905, 2000
Bse118I	RCCGGY	1 cut(s)	38
Bse1I	ACTGG	4 cut(s)	1141, 1799, 2083, 2405
Bse21I	CCTNAGG	1 cut(s)	654
Bse3DI	GCAATG	2 cut(s)	430, 1420
Bse8I	GATNNNNATC	3 cut(s)	1125, 1296, 1839
BseBI	CCWGG	4 cut(s)	156, 725, 1763, 1900
BseCI	ATCGAT	1 cut(s)	2410
BseDI	CCNNGG	8 cut(s)	319, 590, 641, 723, 1560, 1899, 1999, 2126
BseJI	GATNNNNATC	3 cut(s)	1125, 1296, 1839
BseLI	CCNNNNNNNGG	7 cut(s)	314, 1561, 1634, 1768, 1891, 1905, 2000
BseMI	GCAATG	2 cut(s)	430, 1420
BseMII	CTCAG	5 cut(s)	536, 645, 906, 1323, 2146
BseNI	ACTGG	4 cut(s)	1141, 1799, 2083, 2405
BseRI	GAGGAG	5 cut(s)	206, 236, 489, 647, 1888
BseX3I	CGGCCG	1 cut(s)	316
BsgI	GTGCAG	1 cut(s)	923
Bsh1236I	CGCG	1 cut(s)	327
Bsh1285I	CGRYCG	2 cut(s)	319, 2414
BshFI	GGCC	5 cut(s)	56, 65, 318, 948, 2082
BshNI	GGYRCC	2 cut(s)	559, 594
BshVI	ATCGAT	1 cut(s)	2410
BsiEI	CGRYCG	2 cut(s)	319, 2414
BsiHKAI	GWGCWC	1 cut(s)	521
BsiSI	CCGG	5 cut(s)	39, 80, 371, 598, 1087
BslFI	GGGAC	2 cut(s)	1083, 1537
BslI	CCNNNNNNNGG	7 cut(s)	314, 1561, 1634, 1768, 1891, 1905, 2000
BsmAI	GTCTC	6 cut(s)	471, 772, 1190, 1192, 1687, 2350
BsmBI	CGTCTC	1 cut(s)	2350
BsmFI	GGGAC	2 cut(s)	1083, 1537
BsmI	GAATGC	2 cut(s)	1186, 1969
BsnI	GGCC	5 cut(s)	56, 65, 318, 948, 2082
Bso31I	GGTCTC	1 cut(s)	471
Bsp119I	TTCGAA	1 cut(s)	167
Bsp1286I	GDGCHC	1 cut(s)	521
Bsp1407I	TGTACA	1 cut(s)	2262
Bsp143I	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
Bsp19I	CCATGG	2 cut(s)	641, 1999
BspACI	CCGC	4 cut(s)	147, 315, 899, 1719
BspANI	GGCC	5 cut(s)	56, 65, 318, 948, 2082
BspCNI	CTCAG	5 cut(s)	535, 646, 907, 1324, 2145
BspDI	ATCGAT	1 cut(s)	2410
BspFNI	CGCG	1 cut(s)	327
BspLI	GGNNCC	5 cut(s)	160, 561, 596, 761, 1099
BspMAI	CTGCAG	1 cut(s)	1980
BspMI	ACCTGC	1 cut(s)	2270
BspPI	GGATC	4 cut(s)	754, 767, 1100, 1355
BspQI	GCTCTTC	1 cut(s)	796
BspT104I	TTCGAA	1 cut(s)	167
BspT107I	GGYRCC	2 cut(s)	559, 594
BspTNI	GGTCTC	1 cut(s)	471
BsrDI	GCAATG	2 cut(s)	430, 1420
BsrFI	RCCGGY	1 cut(s)	38
BsrGI	TGTACA	1 cut(s)	2262
BsrI	ACTGG	4 cut(s)	1141, 1799, 2083, 2405
BssAI	RCCGGY	1 cut(s)	38
BssECI	CCNNGG	8 cut(s)	319, 590, 641, 723, 1560, 1899, 1999, 2126
BssMI	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
BssNI	GRCGYC	2 cut(s)	42, 612
BssT1I	CCWWGG	3 cut(s)	590, 641, 1999
Bst2UI	CCWGG	4 cut(s)	156, 725, 1763, 1900
Bst4CI	ACNGT	8 cut(s)	239, 701, 711, 716, 1079, 1229, 1511, 1933
Bst6I	CTCTTC	1 cut(s)	796
BstACI	GRCGYC	2 cut(s)	42, 612
BstAUI	TGTACA	1 cut(s)	2262
BstBAI	YACGTR	2 cut(s)	866, 968
BstBI	TTCGAA	1 cut(s)	167
BstC8I	GCNNGC	3 cut(s)	40, 54, 1907
BstDEI	CTNAG	7 cut(s)	419, 522, 654, 915, 1304, 1332, 2132
BstDSI	CCRYGG	2 cut(s)	641, 1999
BstEII	GGTNACC	1 cut(s)	1004
BstFNI	CGCG	1 cut(s)	327
BstHHI	GCGC	3 cut(s)	52, 77, 327
BstKTI	GATC	8 cut(s)	762, 1095, 1129, 1153, 1258, 1363, 2410, 2414
BstMAI	GTCTC	6 cut(s)	471, 772, 1190, 1192, 1687, 2350
BstMBI	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
BstMCI	CGRYCG	2 cut(s)	319, 2414
BstMWI	GCNNNNNNNGC	5 cut(s)	62, 324, 504, 971, 1501
BstNI	CCWGG	4 cut(s)	156, 725, 1763, 1900
BstNSI	RCATGY	1 cut(s)	1700
BstPI	GGTNACC	1 cut(s)	1004
BstSCI	CCNGG	5 cut(s)	154, 723, 1085, 1761, 1898
BstSFI	CTRYAG	3 cut(s)	1200, 1639, 1976
BstUI	CGCG	1 cut(s)	327
BstV2I	GAAGAC	2 cut(s)	450, 1871
BstX2I	RGATCY	1 cut(s)	759
BstXI	CCANNNNNNTGG	1 cut(s)	2006
BstYI	RGATCY	1 cut(s)	759
BstZI	CGGCCG	1 cut(s)	316
Bsu15I	ATCGAT	1 cut(s)	2410
Bsu36I	CCTNAGG	1 cut(s)	654
BsuI	GTATCC	3 cut(s)	660, 1234, 1822
BsuRI	GGCC	5 cut(s)	56, 65, 318, 948, 2082
BsuTUI	ATCGAT	1 cut(s)	2410
BtgI	CCRYGG	2 cut(s)	641, 1999
BtrI	CACGTC	1 cut(s)	2360
BtsI	GCAGTG	1 cut(s)	442
BtsIMutI	CAGTG	6 cut(s)	244, 442, 912, 1234, 1516, 1929
BveI	ACCTGC	1 cut(s)	2270
Cac8I	GCNNGC	3 cut(s)	40, 54, 1907
CaiI	CAGNNNCTG	1 cut(s)	1905
CfoI	GCGC	3 cut(s)	52, 77, 327
Cfr10I	RCCGGY	1 cut(s)	38
Cfr13I	GGNCC	3 cut(s)	600, 946, 1097
ClaI	ATCGAT	1 cut(s)	2410
CseI	GACGC	3 cut(s)	31, 444, 1539
Csp6I	GTAC	5 cut(s)	391, 595, 712, 960, 2263
CspCI	CAANNNNNGTGG	6 cut(s)	852, 887, 1300, 1335, 1984, 2019
CviQI	GTAC	5 cut(s)	391, 595, 712, 960, 2263
DdeI	CTNAG	7 cut(s)	419, 522, 654, 915, 1304, 1332, 2132
DpnI	GATC	8 cut(s)	761, 1094, 1128, 1152, 1257, 1362, 2409, 2413
DpnII	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
DraI	TTTAAA	1 cut(s)	1957
DraIII	CACNNNGTG	1 cut(s)	1289
EaeI	YGGCCR	3 cut(s)	63, 316, 2080
EagI	CGGCCG	1 cut(s)	316
Eam1104I	CTCTTC	1 cut(s)	796
EarI	CTCTTC	1 cut(s)	796
Ecl136II	GAGCTC	1 cut(s)	519
EclXI	CGGCCG	1 cut(s)	316
Eco130I	CCWWGG	3 cut(s)	590, 641, 1999
Eco24I	GRGCYC	1 cut(s)	521
Eco31I	GGTCTC	1 cut(s)	471
Eco32I	GATATC	1 cut(s)	1441
Eco47I	GGWCC	2 cut(s)	600, 1097
Eco52I	CGGCCG	1 cut(s)	316
Eco53kI	GAGCTC	1 cut(s)	519
Eco72I	CACGTG	1 cut(s)	968
Eco81I	CCTNAGG	1 cut(s)	654
Eco91I	GGTNACC	1 cut(s)	1004
EcoICRI	GAGCTC	1 cut(s)	519
EcoO65I	GGTNACC	1 cut(s)	1004
EcoRII	CCWGG	4 cut(s)	154, 723, 1761, 1898
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	3 cut(s)	590, 641, 1999
EcoT22I	ATGCAT	2 cut(s)	1265, 1461
EcoT38I	GRGCYC	1 cut(s)	521
ErhI	CCWWGG	3 cut(s)	590, 641, 1999
Esp3I	CGTCTC	1 cut(s)	2350
FaqI	GGGAC	2 cut(s)	1083, 1537
FbaI	TGATCA	2 cut(s)	1126, 1255
Fnu4HI	GCNGC	1 cut(s)	316
FriOI	GRGCYC	1 cut(s)	521
Fsp4HI	GCNGC	1 cut(s)	316
FspBI	CTAG	2 cut(s)	150, 1605
GlaI	GCGC	3 cut(s)	51, 76, 326
GluI	GCNGC	1 cut(s)	316
GsuI	CTGGAG	2 cut(s)	1035, 1868
HaeIII	GGCC	5 cut(s)	56, 65, 318, 948, 2082
HapII	CCGG	5 cut(s)	39, 80, 371, 598, 1087
HgaI	GACGC	3 cut(s)	31, 444, 1539
HhaI	GCGC	3 cut(s)	52, 77, 327
Hin1I	GRCGYC	2 cut(s)	42, 612
Hin6I	GCGC	3 cut(s)	50, 75, 325
HinP1I	GCGC	3 cut(s)	50, 75, 325
HincII	GTYRAC	2 cut(s)	616, 2167
HindII	GTYRAC	2 cut(s)	616, 2167
HpaII	CCGG	5 cut(s)	39, 80, 371, 598, 1087
HphI	GGTGA	6 cut(s)	371, 551, 947, 1301, 2294, 2301
Hpy166II	GTNNAC	3 cut(s)	616, 2167, 2363
Hpy188III	TCNNGA	8 cut(s)	653, 771, 1052, 1154, 1364, 1423, 1885, 2134
Hpy8I	GTNNAC	3 cut(s)	616, 2167, 2363
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	3 cut(s)	1049, 2145, 2279
HpyCH4III	ACNGT	8 cut(s)	239, 701, 711, 716, 1079, 1229, 1511, 1933
HpyCH4IV	ACGT	6 cut(s)	612, 618, 865, 967, 2026, 2359
HpyCH4V	TGCA	8 cut(s)	751, 904, 1263, 1322, 1459, 1949, 1978, 2226
HpyF10VI	GCNNNNNNNGC	5 cut(s)	62, 324, 504, 971, 1501
HpyF3I	CTNAG	7 cut(s)	419, 522, 654, 915, 1304, 1332, 2132
HpySE526I	ACGT	6 cut(s)	612, 618, 865, 967, 2026, 2359
Hsp92I	GRCGYC	2 cut(s)	42, 612
HspAI	GCGC	3 cut(s)	50, 75, 325
KpnI	GGTACC	1 cut(s)	598
KroI	GCCGGC	1 cut(s)	38
KroNI	GCCGGC	1 cut(s)	40
Ksp22I	TGATCA	2 cut(s)	1126, 1255
Kzo9I	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
LguI	GCTCTTC	1 cut(s)	796
LmnI	GCTCC	1 cut(s)	1480
LweI	GCATC	8 cut(s)	865, 868, 983, 1346, 1428, 1537, 1849, 1936
MaeI	CTAG	2 cut(s)	150, 1605
MaeII	ACGT	6 cut(s)	612, 618, 865, 967, 2026, 2359
MaeIII	GTNAC	4 cut(s)	664, 1004, 1751, 2396
MalI	GATC	8 cut(s)	761, 1094, 1128, 1152, 1257, 1362, 2409, 2413
MboI	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
MflI	RGATCY	1 cut(s)	759
MhlI	GDGCHC	1 cut(s)	521
MlyI	GAGTC	4 cut(s)	394, 1885, 1904, 2294
MmeI	TCCRAC	2 cut(s)	683, 1024
Mph1103I	ATGCAT	2 cut(s)	1265, 1461
MroNI	GCCGGC	1 cut(s)	38
MroXI	GAANNNNTTC	1 cut(s)	163
MseI	TTAA	6 cut(s)	1374, 1398, 1536, 1935, 1956, 1983
MslI	CAYNNNNRTG	3 cut(s)	348, 2004, 2280
MspI	CCGG	5 cut(s)	39, 80, 371, 598, 1087
MspR9I	CCNGG	5 cut(s)	156, 725, 1087, 1763, 1900
Mva1269I	GAATGC	2 cut(s)	1186, 1969
MvaI	CCWGG	4 cut(s)	156, 725, 1763, 1900
MvnI	CGCG	1 cut(s)	327
MwoI	GCNNNNNNNGC	5 cut(s)	62, 324, 504, 971, 1501
NaeI	GCCGGC	1 cut(s)	40
NciI	CCSGG	1 cut(s)	1087
NcoI	CCATGG	2 cut(s)	641, 1999
NdeII	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
NgoMIV	GCCGGC	1 cut(s)	38
NlaIV	GGNNCC	5 cut(s)	160, 561, 596, 761, 1099
NmeAIII	GCCGAG	2 cut(s)	344, 2107
NmuCI	GTSAC	1 cut(s)	1751
NsiI	ATGCAT	2 cut(s)	1265, 1461
NspI	RCATGY	1 cut(s)	1700
NspV	TTCGAA	1 cut(s)	167
OliI	CACNNNNGTG	1 cut(s)	2280
PaqCI	CACCTGC	1 cut(s)	2270
PciSI	GCTCTTC	1 cut(s)	796
PctI	GAATGC	2 cut(s)	1186, 1969
PdiI	GCCGGC	1 cut(s)	40
PdmI	GAANNNNTTC	1 cut(s)	163
PflMI	CCANNNNNTGG	2 cut(s)	1634, 1905
PfoI	TCCNGGA	3 cut(s)	154, 1085, 1761
PkrI	GCNGC	1 cut(s)	317
Ple19I	CGATCG	1 cut(s)	2414
PleI	GAGTC	4 cut(s)	394, 1884, 1903, 2294
PmaCI	CACGTG	1 cut(s)	968
PmlI	CACGTG	1 cut(s)	968
PpsI	GAGTC	4 cut(s)	394, 1884, 1903, 2294
Ppu21I	YACGTR	2 cut(s)	866, 968
PshBI	ATTAAT	1 cut(s)	1374
PsiI	TTATAA	2 cut(s)	1668, 2022
Psp124BI	GAGCTC	1 cut(s)	521
Psp1406I	AACGTT	1 cut(s)	618
Psp6I	CCWGG	4 cut(s)	154, 723, 1761, 1898
PspCI	CACGTG	1 cut(s)	968
PspEI	GGTNACC	1 cut(s)	1004
PspGI	CCWGG	4 cut(s)	154, 723, 1761, 1898
PspN4I	GGNNCC	5 cut(s)	160, 561, 596, 761, 1099
PspPI	GGNCC	3 cut(s)	600, 946, 1097
PstI	CTGCAG	1 cut(s)	1980
PstNI	CAGNNNCTG	1 cut(s)	1905
PsuI	RGATCY	1 cut(s)	759
PvuI	CGATCG	1 cut(s)	2414
RsaI	GTAC	5 cut(s)	392, 596, 713, 961, 2264
RsaNI	GTAC	5 cut(s)	391, 595, 712, 960, 2263
RseI	CAYNNNNRTG	3 cut(s)	348, 2004, 2280
SacI	GAGCTC	1 cut(s)	521
SapI	GCTCTTC	1 cut(s)	796
SaqAI	TTAA	6 cut(s)	1374, 1398, 1536, 1935, 1956, 1983
SatI	GCNGC	1 cut(s)	316
Sau3AI	GATC	8 cut(s)	759, 1092, 1126, 1150, 1255, 1360, 2407, 2411
Sau96I	GGNCC	3 cut(s)	600, 946, 1097
ScaI	AGTACT	1 cut(s)	713
SchI	GAGTC	4 cut(s)	394, 1885, 1904, 2294
ScrFI	CCNGG	5 cut(s)	156, 725, 1087, 1763, 1900
SduI	GDGCHC	1 cut(s)	521
SfaNI	GCATC	8 cut(s)	865, 868, 983, 1346, 1428, 1537, 1849, 1936
SfcI	CTRYAG	3 cut(s)	1200, 1639, 1976
SfiI	GGCCNNNNNGGCC	1 cut(s)	62
SfuI	TTCGAA	1 cut(s)	167
SinI	GGWCC	2 cut(s)	600, 1097
SmiMI	CAYNNNNRTG	3 cut(s)	348, 2004, 2280
SmlI	CTYRAG	2 cut(s)	402, 769
SmoI	CTYRAG	2 cut(s)	402, 769
SsiI	CCGC	4 cut(s)	147, 315, 899, 1719
SspI	AATATT	1 cut(s)	2222
SspMI	CTAG	2 cut(s)	150, 1605
SstI	GAGCTC	1 cut(s)	521
StyD4I	CCNGG	5 cut(s)	154, 723, 1085, 1761, 1898
StyI	CCWWGG	3 cut(s)	590, 641, 1999
TaaI	ACNGT	8 cut(s)	239, 701, 711, 716, 1079, 1229, 1511, 1933
TaiI	ACGT	6 cut(s)	615, 621, 868, 970, 2029, 2362
TaqI	TCGA	4 cut(s)	45, 167, 1474, 2410
TaqII	GACCGA	1 cut(s)	1085
TatI	WGTACW	3 cut(s)	390, 711, 2262
TauI	GCSGC	1 cut(s)	318
Tru1I	TTAA	6 cut(s)	1374, 1398, 1536, 1935, 1956, 1983
Tru9I	TTAA	6 cut(s)	1374, 1398, 1536, 1935, 1956, 1983
TscAI	CASTG	6 cut(s)	244, 442, 919, 1234, 1516, 1936
TseFI	GTSAC	1 cut(s)	1751
Tsp45I	GTSAC	1 cut(s)	1751
TspGWI	ACGGA	1 cut(s)	1627
TspRI	CASTG	6 cut(s)	244, 442, 919, 1234, 1516, 1936
Van91I	CCANNNNNTGG	2 cut(s)	1634, 1905
VpaK11BI	GGWCC	2 cut(s)	600, 1097
VspI	ATTAAT	1 cut(s)	1374
XapI	RAATTY	3 cut(s)	1620, 2054, 2105
XceI	RCATGY	1 cut(s)	1700
XmnI	GAANNNNTTC	1 cut(s)	163
XspI	CTAG	2 cut(s)	150, 1605
ZraI	GACGTC	1 cut(s)	613
ZrmI	AGTACT	1 cut(s)	713
Zsp2I	ATGCAT	2 cut(s)	1265, 1461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.