Rh4CG274900

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0004701
Physical Location & Seq
Forward (+)
53072416 .. 53079142
6727 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG274900.1

Sequence Viewer

Length: 3168 bp
ATGGCAGATTTGGACGACGATTTCGGAGACATCTACACTGATGTCGAAGCGCAGGCCGCTTCAGCCATCAACGGCGTATCGGACTTCGCTCAGTTCTATACAGAACCCGAAGACCAGCAAGATAGAAATGATAGTAACAACAATGCAAAGAACGGCAAGGGATTCGTCTCCGATTCTAAGAAACCCAAAGAGGAATTGGGTGGTAAAGTTTCGGGTTCGGAGTCGGATGAGGATTACAGTGACAGTGAGGATGACCTGAATATAGTTTTGAACGATGGGGGTTGTAAAGGTATTCCCTTTCCGGTTTCAGGTGGAGGGAGCATGAGGGTTGATGATTATGAAGATGAGGATGATGATGCTCTTGTGCCCATGAAAGATTGCAAGTATGTATGGACTCAAGGATCTACTTGTCCAAGCAATGGAAAAGCCAATGAGTCTTTGGATTTGGTGTCGCCTATGCCGTTTGGAGGAGACCACTCGCAGATTAGTCGTGTTCGTGATACACCTAATCCAGTGGTGATTCGAAATAGATATGGTTTTCGACTTCCTTGGTATAGGACCATACTGGACGTGGATATTGAATCATTTGAGGAGAAGTCATGGAGGTATCCTGAAGTTGATATAACAGATTACTTCAATTTTGATTTGAACGAGGACAGCTGGAAAGAGTACTGCAACTCCCTGGAACAACTTCGGCAGCTAAAATCCACACAGTATGGCATGCCTGGCTCTTCAAAATTTTATCAGGCTAAAGAAGCTGGATCTGAGTATGGCAGATTCACCCAGGAAACTATGCCTAAAGAAATGAATTATGCTGGATCATGGACATATGCTCCTCCGTCATCAACAGTTTCTGATTTCAGACCAAAAGGGAAAGCAATTCAGATAGAAGATAGTGTTGTTGAACGCCAACCATCTTTTGATAGTAGGCATCCACGAAGTTGGAATTCTGATGTTGTGATACAGATTTCTGTGCATGATCCCACCCAGGAAACCTCCCATTCTGGTGAGGAACATGGGCATACAAATAGCAGGGCCCATGAGACATTTGAAAATGGGGAGCTTGATGCAAATGGAAACCAAAACAATATCTCATATAATACTACGACCGATGATGATTCATCATTAGGAAGTCCAGAAGCAAACACAAGAAAATTAGACAGATGTTCCCAGAAGATCAGTGCATCCCATCCAATGACAATAGACTCCGATGATCACAGTAACCAGGTCATTGGTGTTGATGGGGATAACCATAAGGAGGTGAATGGTATCTCATTGGAGGCCATTGAAATTACAAATAAAGTGACAGAAAGTCTTGACAGGAATACTTCCTGTGCTGATCAATGCATGATGGAGACACTATTATTGGTGAGTGATGGCGATGATCAACTTAGTCTCATTTCATCATGTTTTGCATCTGATTCTGAAGCTTCCAAGAACAGTGTTCATTTTGATTCAGAAGATATTCATACTCCTGTAAGCCCTGTGGTGAATTCACACACTGAACCACGCAAGCCTGTCACATCATCTTTTAAGAACTCAAAAAGCAATTGCATCAAAAGAAAAAGAGTTGATATCCAAGATTATTCCATCTGTAGAAGTTCTTCTCAAAAGAAGCATAATCATCAGCCCAGGAGGCTTAACGGTGTTGATGAACCAAGTAAGCACAGAAACAACGACAATGATAGGTCACCCACCTCAGATACAGAGGACCCATATAACAGGAATTGCTCAGAGAATTTTCGTGGACAGAAGGACAGGCTGCGAGATTCTGGCGGTAGTAACAGAGAAGATAGTCCAGATTATAAAGAACCAAAGTTTTCCTGCCATTATGGTATTAGATATGATGATAACCATCATCGGAATCAAAGAGATAAGAGAAAATTTTCAAGTAGAAAAGGTAGTCACCTGTTCCAAGAGAAACTAGATCCATATGCGAAAAGAACTTTTAATGAAAGGCAGACTTTCTGTGAAGATAAGGATAGAGATTGGAGTCACTTTGGAAGAAGGCAGTTCACTGAAGAGAGGAGTCCTCTCCCCAGCAGGGAGTCCAGGGGGTTGCATTCTAGGTGTTCCTCCACTGTTGAGGAAAGGGGTGCTCAATGGGGAAGGAATAGCAACAAACTGCTACTTAAGAAAATATCCAATTATAAGTGGCATGAGGACGATTTTCTGGGAGAAAAAGCTGGGAGATACGCATCATTCACTAGTCGAAAAAGGAATAATTTTGATGACTTTGATGAGAGGCAGTTGCCACCCGTCAGGAGAGAATTAAGTAACTGGGGCCGAAGGGGTGGATATGTGGACAGTCCCATTTATTTGGATGATTCACACTCTGAGCAATTTGAAGATGAATATTGCAAACACAGAGAAAATCGAGACTGCTCCCATCAGTCTTACAGAGACTTATATACAGCTGATGTAGGAAGCTGGAATCTCTCCATATCACCAAGAAATGAAGTTTCTTACCCAAGAACAAGTGATGAAAGATATTGGAGACGTGTGAGAAAAATAGATGCCGATGAAGCCAATCAGATTAATTGGTTTGATGATCACCATGATGCTTATGAAATCGAAGATAACATGTATCGTAATGATCATTTAAGGTGGAGAAGATCCAACTGGCAATCTGAAGTTATGCACTGGACTGAAGACCAGTTTACTTTCAGACATCACGGTGATGAATTGTATTCTGAGAAAGCATCACGTTCTTATCAGAAATTTGTACGGCGTGAAAAATTTCATGCTAAATATGGTCCTCTGCATGATGGAATGCCTATTGATATTATACAGCTAGAGCAGCATGGATTGAAAATGGCCAGAAAAGGAGTCGGTGCTAACTTTATTAATAGAAGTGCTAAGATGCATAGAGTTAAGCATGAGCAGACGTTGAGGTGCAGGGATTCGATGGACTTGGCTGTTAGGGAACAAAAGGTAAAGTTGGGGAAACCAAGGGTGAAACCTTTCCTCACCCTACTTGTATATATCAGTGCTCCAATTCAGTTGAGCAAGCCTTATTTATTCAGGTCAATGATATTACATTGCATCTTTCCTGTTTTTGTTTTTGGTTTCTTATATCATGTATTTGCTATTCCTTTGCCAAGTAATGTGTTTTATCACTTTTATGAGCCTTTAATGATTTCTAGTTTTTCGATTTGTCCTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1055

Amino Acids

121.86

Weight (kDa)

5.71

Isoelectric Point (pI)

51.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 190 - 232 5.3e-18 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1806, 2151
AccB7I CCANNNNNTGG 1 cut(s) 419
AciI CCGC 2 cut(s) 57, 1776
AclWI GGATC 6 cut(s) 409, 769, 826, 974, 1922, 2610
AcoI YGGCCR 1 cut(s) 2817
AcsI RAATTY 7 cut(s) 737, 946, 1492, 1738, 1883, 2720, 2738
AcuI CTGAAG 6 cut(s) 45, 633, 1446, 2040, 2652, 2670
AfaI GTAC 2 cut(s) 671, 2727
AfiI CCNNNNNNNGG 5 cut(s) 308, 419, 467, 1258, 2044
AflII CTTAAG 1 cut(s) 2132
AflIII ACRYGT 2 cut(s) 2500, 2583
AhdI GACNNNNNGTC 1 cut(s) 1311
AhlI ACTAGT 1 cut(s) 2207
AjiI CACGTC 2 cut(s) 571, 2501
AjnI CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
AluBI AGCT 9 cut(s) 660, 700, 758, 1063, 1430, 2186, 2417, 2430, 2794
AluI AGCT 9 cut(s) 660, 700, 758, 1063, 1430, 2186, 2417, 2430, 2794
Alw21I GWGCWC 2 cut(s) 2101, 2995
Alw26I GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
AlwI GGATC 6 cut(s) 409, 769, 826, 974, 1922, 2610
AlwNI CAGNNNCTG 1 cut(s) 854
AoxI GGCC 5 cut(s) 54, 1035, 1281, 2284, 2817
ApaI GGGCCC 1 cut(s) 1039
ApeKI GCWGC 3 cut(s) 697, 1762, 2800
ApoI RAATTY 7 cut(s) 737, 946, 1492, 1738, 1883, 2720, 2738
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 2 cut(s) 2538, 2847
Asp700I GAANNNNTTC 6 cut(s) 690, 1464, 1603, 1885, 2739, 2963
AspLEI GCGC 1 cut(s) 52
AspS9I GGNCC 6 cut(s) 558, 1035, 1036, 1711, 2284, 2756
AsuII TTCGAA 1 cut(s) 523
AvaII GGWCC 3 cut(s) 558, 1711, 2756
BaeGI GKGCMC 2 cut(s) 369, 1039
BalI TGGCCA 1 cut(s) 2819
BanII GRGCYC 1 cut(s) 1039
BarI GAAGNNNNNNTAC 2 cut(s) 1588, 1620
BbsI GAAGAC 2 cut(s) 117, 2658
Bbv12I GWGCWC 2 cut(s) 2101, 2995
BbvI GCAGC 3 cut(s) 709, 1749, 2812
BceAI ACGGC 4 cut(s) 88, 169, 445, 2744
BcgI CGANNNNNNTGC 4 cut(s) 145, 179, 470, 504
BciT130I CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 5 cut(s) 1213, 1339, 1384, 2551, 2596
BcoDI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
BcuI ACTAGT 1 cut(s) 2207
BfaI CTAG 5 cut(s) 1925, 2067, 2208, 2795, 3144
BfmI CTRYAG 1 cut(s) 1594
BfrI CTTAAG 1 cut(s) 2132
BfuI GTATCC 1 cut(s) 618
BglI GCCNNNNNGGC 1 cut(s) 1636
BisI GCNGC 4 cut(s) 57, 698, 1763, 2801
BlsI GCNGC 4 cut(s) 58, 699, 1764, 2802
BmcAI AGTACT 1 cut(s) 671
Bme1390I CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
Bme18I GGWCC 3 cut(s) 558, 1711, 2756
BmeRI GACNNNNNGTC 1 cut(s) 1311
BmgBI CACGTC 2 cut(s) 571, 2501
BmgT120I GGNCC 6 cut(s) 558, 1035, 1036, 1711, 2284, 2756
BmiI GGNNCC 3 cut(s) 1037, 1713, 2285
BmrFI CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BmrI ACTGGG 1 cut(s) 2290
BmuI ACTGGG 1 cut(s) 2290
BpiI GAAGAC 2 cut(s) 117, 2658
BplI GAGNNNNNCTC 2 cut(s) 2017, 2049
Bpu14I TTCGAA 1 cut(s) 523
BpuEI CTTGAG 1 cut(s) 381
BsaBI GATNNNNATC 2 cut(s) 1854, 2197
BsaI GGTCTC 1 cut(s) 465
BsaJI CCNNGG 7 cut(s) 548, 681, 783, 987, 1631, 2052, 2951
BsaWI WCCGGW 1 cut(s) 301
BsaXI ACNNNNNCTCC 4 cut(s) 662, 692, 817, 847
Bsc4I CCNNNNNNNGG 5 cut(s) 308, 419, 467, 1258, 2044
Bse1I ACTGG 6 cut(s) 512, 570, 2285, 2627, 2648, 2656
Bse3DI GCAATG 2 cut(s) 424, 3040
Bse8I GATNNNNATC 2 cut(s) 1854, 2197
BseBI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BseDI CCNNGG 7 cut(s) 548, 681, 783, 987, 1631, 2052, 2951
BseGI GGATG 7 cut(s) 232, 256, 355, 931, 1184, 1189, 2329
BseJI GATNNNNATC 2 cut(s) 1854, 2197
BseLI CCNNNNNNNGG 5 cut(s) 308, 419, 467, 1258, 2044
BseMI GCAATG 2 cut(s) 424, 3040
BseMII CTCAG 6 cut(s) 104, 756, 1713, 1746, 2328, 2685
BseNI ACTGG 6 cut(s) 512, 570, 2285, 2627, 2648, 2656
BseRI GAGGAG 4 cut(s) 483, 605, 825, 2041
BseSI GKGCMC 2 cut(s) 369, 1039
BseXI GCAGC 3 cut(s) 709, 1749, 2812
BseYI CCCAGC 2 cut(s) 2039, 2186
BsgI GTGCAG 1 cut(s) 2917
Bsh1285I CGRYCG 1 cut(s) 1110
BshFI GGCC 5 cut(s) 56, 1037, 1283, 2286, 2819
BsiEI CGRYCG 1 cut(s) 1110
BsiHKAI GWGCWC 2 cut(s) 2101, 2995
BsiSI CCGG 1 cut(s) 302
BslFI GGGAC 1 cut(s) 2295
BslI CCNNNNNNNGG 5 cut(s) 308, 419, 467, 1258, 2044
BsmAI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
BsmBI CGTCTC 2 cut(s) 172, 2491
BsmFI GGGAC 1 cut(s) 2295
BsmI GAATGC 2 cut(s) 2062, 2778
BsnI GGCC 5 cut(s) 56, 1037, 1283, 2286, 2819
Bso31I GGTCTC 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 523
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 4 cut(s) 369, 1039, 2101, 2995
BspACI CCGC 2 cut(s) 57, 1776
BspANI GGCC 5 cut(s) 56, 1037, 1283, 2286, 2819
BspCNI CTCAG 6 cut(s) 103, 757, 1712, 1745, 2329, 2686
BspLI GGNNCC 3 cut(s) 1037, 1713, 2285
BspPI GGATC 6 cut(s) 409, 769, 826, 974, 1922, 2610
BspQI GCTCTTC 1 cut(s) 736
BspT104I TTCGAA 1 cut(s) 523
BspTI CTTAAG 1 cut(s) 2132
BspTNI GGTCTC 1 cut(s) 465
BsrDI GCAATG 2 cut(s) 424, 3040
BsrI ACTGG 6 cut(s) 512, 570, 2285, 2627, 2648, 2656
BssECI CCNNGG 7 cut(s) 548, 681, 783, 987, 1631, 2052, 2951
BssT1I CCWWGG 2 cut(s) 548, 2951
Bst2UI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
Bst6I CTCTTC 2 cut(s) 736, 2016
BstAFI CTTAAG 1 cut(s) 2132
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 4 cut(s) 54, 722, 1514, 3011
BstDEI CTNAG 9 cut(s) 90, 177, 765, 1391, 1699, 1732, 2337, 2694, 2859
BstEII GGTNACC 1 cut(s) 1689
BstF5I GGATG 7 cut(s) 232, 256, 355, 931, 1184, 1189, 2329
BstHHI GCGC 1 cut(s) 52
BstMAI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
BstMCI CGRYCG 1 cut(s) 1110
BstMWI GCNNNNNNNGC 7 cut(s) 56, 62, 726, 755, 1636, 2525, 2800
BstNI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BstNSI RCATGY 2 cut(s) 724, 2587
BstPI GGTNACC 1 cut(s) 1689
BstSCI CCNGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
BstSFI CTRYAG 1 cut(s) 1594
BstSLI GKGCMC 2 cut(s) 369, 1039
BstV1I GCAGC 3 cut(s) 709, 1749, 2812
BstV2I GAAGAC 2 cut(s) 117, 2658
BstX2I RGATCY 4 cut(s) 401, 761, 1927, 2615
BstXI CCANNNNNNTGG 3 cut(s) 942, 1232, 2320
BstYI RGATCY 4 cut(s) 401, 761, 1927, 2615
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 5 cut(s) 56, 1037, 1283, 2286, 2819
BtgZI GCGATG 1 cut(s) 1395
BtrI CACGTC 2 cut(s) 571, 2501
BtsCI GGATG 7 cut(s) 232, 256, 355, 931, 1184, 1189, 2329
Cac8I GCNNGC 4 cut(s) 54, 722, 1514, 3011
CaiI CAGNNNCTG 1 cut(s) 854
CfoI GCGC 1 cut(s) 52
Cfr13I GGNCC 6 cut(s) 558, 1035, 1036, 1711, 2284, 2756
CsiI ACCWGGT 1 cut(s) 1224
Csp6I GTAC 2 cut(s) 670, 2726
CviQI GTAC 2 cut(s) 670, 2726
DdeI CTNAG 9 cut(s) 90, 177, 765, 1391, 1699, 1732, 2337, 2694, 2859
DriI GACNNNNNGTC 1 cut(s) 1311
EaeI YGGCCR 1 cut(s) 2817
Eam1104I CTCTTC 2 cut(s) 736, 2016
Eam1105I GACNNNNNGTC 1 cut(s) 1311
EarI CTCTTC 2 cut(s) 736, 2016
Eco130I CCWWGG 2 cut(s) 548, 2951
Eco24I GRGCYC 1 cut(s) 1039
Eco31I GGTCTC 1 cut(s) 465
Eco32I GATATC 1 cut(s) 1576
Eco47I GGWCC 3 cut(s) 558, 1711, 2756
Eco57I CTGAAG 6 cut(s) 45, 633, 1446, 2040, 2652, 2670
Eco91I GGTNACC 1 cut(s) 1689
EcoO109I RGGNCCY 2 cut(s) 1035, 1711
EcoO65I GGTNACC 1 cut(s) 1689
EcoRI GAATTC 2 cut(s) 946, 1492
EcoRII CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
EcoRV GATATC 1 cut(s) 1576
EcoT14I CCWWGG 2 cut(s) 548, 2951
EcoT22I ATGCAT 2 cut(s) 1349, 2868
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 2 cut(s) 548, 2951
Esp3I CGTCTC 2 cut(s) 172, 2491
FalI AAGNNNNNCTT 2 cut(s) 1948, 1980
FaqI GGGAC 1 cut(s) 2295
FauNDI CATATG 2 cut(s) 829, 1933
FbaI TGATCA 5 cut(s) 1213, 1339, 1384, 2551, 2596
Fnu4HI GCNGC 4 cut(s) 57, 698, 1763, 2801
FokI GGATG 7 cut(s) 239, 263, 362, 918, 1171, 1176, 2336
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 4 cut(s) 57, 698, 1763, 2801
FspBI CTAG 5 cut(s) 1925, 2067, 2208, 2795, 3144
GlaI GCGC 1 cut(s) 51
GluI GCNGC 4 cut(s) 57, 698, 1763, 2801
GsaI CCCAGC 2 cut(s) 2043, 2190
HaeIII GGCC 5 cut(s) 56, 1037, 1283, 2286, 2819
HapII CCGG 1 cut(s) 302
HhaI GCGC 1 cut(s) 52
Hin6I GCGC 1 cut(s) 50
HinP1I GCGC 1 cut(s) 50
HindIII AAGCTT 1 cut(s) 1428
HpaII CCGG 1 cut(s) 302
Hpy166II GTNNAC 4 cut(s) 1748, 2016, 2305, 2661
Hpy188III TCNNGA 7 cut(s) 497, 611, 1136, 1316, 1799, 2263, 2378
Hpy8I GTNNAC 4 cut(s) 1748, 2016, 2305, 2661
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 4 cut(s) 1747, 2001, 2103, 2283
HpyCH4IV ACGT 4 cut(s) 570, 2500, 2707, 2888
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 62, 726, 755, 1636, 2525, 2800
HpyF3I CTNAG 9 cut(s) 90, 177, 765, 1391, 1699, 1732, 2337, 2694, 2859
HpySE526I ACGT 4 cut(s) 570, 2500, 2707, 2888
HspAI GCGC 1 cut(s) 50
Ksp22I TGATCA 5 cut(s) 1213, 1339, 1384, 2551, 2596
LguI GCTCTTC 1 cut(s) 736
LmnI GCTCC 5 cut(s) 318, 838, 1060, 2390, 2998
Lsp1109I GCAGC 3 cut(s) 709, 1749, 2812
MabI ACCWGGT 1 cut(s) 1224
MaeI CTAG 5 cut(s) 1925, 2067, 2208, 2795, 3144
MaeII ACGT 4 cut(s) 570, 2500, 2707, 2888
MfeI CAATTG 1 cut(s) 1549
MflI RGATCY 4 cut(s) 401, 761, 1927, 2615
MhlI GDGCHC 4 cut(s) 369, 1039, 2101, 2995
MlsI TGGCCA 1 cut(s) 2819
MluNI TGGCCA 1 cut(s) 2819
MlyI GAGTC 8 cut(s) 230, 388, 443, 1199, 2002, 2038, 2057, 2838
MmeI TCCRAC 3 cut(s) 204, 923, 2643
Mox20I TGGCCA 1 cut(s) 2819
Mph1103I ATGCAT 2 cut(s) 1349, 2868
MroXI GAANNNNTTC 6 cut(s) 690, 1464, 1603, 1885, 2739, 2963
MscI TGGCCA 1 cut(s) 2819
MslI CAYNNNNRTG 5 cut(s) 1005, 2559, 2676, 2679, 3123
Msp20I TGGCCA 1 cut(s) 2819
MspA1I CMGCKG 2 cut(s) 660, 2417
MspCI CTTAAG 1 cut(s) 2132
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
MunI CAATTG 1 cut(s) 1549
Mva1269I GAATGC 2 cut(s) 2062, 2778
MvaI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
MwoI GCNNNNNNNGC 7 cut(s) 56, 62, 726, 755, 1636, 2525, 2800
NdeI CATATG 2 cut(s) 829, 1933
NlaIV GGNNCC 3 cut(s) 1037, 1713, 2285
NmuCI GTSAC 6 cut(s) 239, 1303, 1519, 1689, 1904, 1994
NsiI ATGCAT 2 cut(s) 1349, 2868
NspI RCATGY 2 cut(s) 724, 2587
NspV TTCGAA 1 cut(s) 523
PaeI GCATGC 1 cut(s) 724
PciI ACATGT 1 cut(s) 2583
PciSI GCTCTTC 1 cut(s) 736
PcsI WCGNNNNNNNCGW 1 cut(s) 458
PctI GAATGC 2 cut(s) 2062, 2778
PdmI GAANNNNTTC 6 cut(s) 690, 1464, 1603, 1885, 2739, 2963
PflMI CCANNNNNTGG 1 cut(s) 419
PkrI GCNGC 4 cut(s) 58, 699, 1764, 2802
PleI GAGTC 8 cut(s) 229, 388, 442, 1199, 2001, 2037, 2056, 2837
PpsI GAGTC 8 cut(s) 229, 388, 442, 1199, 2001, 2037, 2056, 2837
PpuMI RGGWCCY 1 cut(s) 1711
PscI ACATGT 1 cut(s) 2583
PshBI ATTAAT 2 cut(s) 2538, 2847
PsiI TTATAA 2 cut(s) 1806, 2151
Psp5II RGGWCCY 1 cut(s) 1711
Psp6I CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
PspEI GGTNACC 1 cut(s) 1689
PspFI CCCAGC 2 cut(s) 2039, 2186
PspGI CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
PspN4I GGNNCC 3 cut(s) 1037, 1713, 2285
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 6 cut(s) 558, 1035, 1036, 1711, 2284, 2756
PspPPI RGGWCCY 1 cut(s) 1711
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 4 cut(s) 401, 761, 1927, 2615
PvuII CAGCTG 2 cut(s) 660, 2417
RsaI GTAC 2 cut(s) 671, 2727
RsaNI GTAC 2 cut(s) 670, 2726
RseI CAYNNNNRTG 5 cut(s) 1005, 2559, 2676, 2679, 3123
SapI GCTCTTC 1 cut(s) 736
SatI GCNGC 4 cut(s) 57, 698, 1763, 2801
Sau96I GGNCC 6 cut(s) 558, 1035, 1036, 1711, 2284, 2756
ScaI AGTACT 1 cut(s) 671
SchI GAGTC 8 cut(s) 230, 388, 443, 1199, 2002, 2038, 2057, 2838
ScrFI CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
SduI GDGCHC 4 cut(s) 369, 1039, 2101, 2995
SexAI ACCWGGT 1 cut(s) 1224
SfcI CTRYAG 1 cut(s) 1594
SfuI TTCGAA 1 cut(s) 523
SinI GGWCC 3 cut(s) 558, 1711, 2756
SmiMI CAYNNNNRTG 5 cut(s) 1005, 2559, 2676, 2679, 3123
SmlI CTYRAG 2 cut(s) 396, 2132
SmoI CTYRAG 2 cut(s) 396, 2132
SpeI ACTAGT 1 cut(s) 2207
SphI GCATGC 1 cut(s) 724
SsiI CCGC 2 cut(s) 57, 1776
SspI AATATT 1 cut(s) 2357
SspMI CTAG 5 cut(s) 1925, 2067, 2208, 2795, 3144
StyD4I CCNGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
StyI CCWWGG 2 cut(s) 548, 2951
TaiI ACGT 4 cut(s) 573, 2503, 2710, 2891
TaqI TCGA 8 cut(s) 45, 523, 541, 2212, 2377, 2574, 2906, 3152
TaqII GACCGA 1 cut(s) 1124
TatI WGTACW 1 cut(s) 669
TauI GCSGC 1 cut(s) 59
TseFI GTSAC 6 cut(s) 239, 1303, 1519, 1689, 1904, 1994
TseI GCWGC 3 cut(s) 697, 1762, 2800
Tsp45I GTSAC 6 cut(s) 239, 1303, 1519, 1689, 1904, 1994
TspGWI ACGGA 1 cut(s) 828
Van91I CCANNNNNTGG 1 cut(s) 419
Vha464I CTTAAG 1 cut(s) 2132
VpaK11BI GGWCC 3 cut(s) 558, 1711, 2756
VspI ATTAAT 2 cut(s) 2538, 2847
XapI RAATTY 7 cut(s) 737, 946, 1492, 1738, 1883, 2720, 2738
XceI RCATGY 2 cut(s) 724, 2587
XcmI CCANNNNNNNNNTGG 3 cut(s) 193, 436, 568
XmnI GAANNNNTTC 6 cut(s) 690, 1464, 1603, 1885, 2739, 2963
XspI CTAG 5 cut(s) 1925, 2067, 2208, 2795, 3144
ZrmI AGTACT 1 cut(s) 671
Zsp2I ATGCAT 2 cut(s) 1349, 2868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.