RchiOBHm_Chr4g0425101

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0004701
Physical Location & Seq
Forward (+)
50806580 .. 50813267
6688 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39433

Sequence Viewer

Length: 3546 bp
ATGGCAGATTTGGACGACGATTTCGGAGACATCTACACTGATGTCGAAGCGCAGGCCGCTTCAGCCATCAACGGCGTATCGGACTTCGCTCAGTTCTATACAGAAGCCGAAGACCAGCAAGATAGGAATGATAGTAACAACAATGCAAAGAACGGCAAGGGTTTCGTCTCCGATTCTAAGAAACCCAAAGAGGAATTGGGTGGTAAAGTTTTGGGTTCGGAGTCGGATGAGGATTACAGTGACAGTGAGGATGACCTGAATATAGTTTTGAACGATGGGGGTTGTAAAGGTATTCCCTTTCCGGTTTCAGGTGGAGGGAGCATGAGGGTTGATGATTATGAAGATGAGGATGATGATGCTCTTGTGCCCATGAAAGATTGCAAGTATGTATGGACTCAAGGATCTACCTGTCCAAGCAATGGAAAAGCCAATGAGTCTTTGGATTTGGTGTCGCCTATGCCGTTTGGAGGAGACCACTCGCAGATTAGTCGTGTTCGTGATACACCTAATCCAGTGGTGATTCGAAATAGATATGGTTTTCGACTTCCTTGGTATAGGACCATACTGGACGTGGATGTTGAATCATTTGAGGAGAAGTCATGGAGGTATCCTGAAGTTGATATAACAGATTACTTCAATTTTGATTTGAACGAGGACAGCTGGAAAGAGTACTGCAACTCCCTGGAACAACTTCGGCGGCTAAAATCCACACAGTATGGCATGCCTGGCTCTTCAAAATTTTATCAGGTTAAAGAAGCTGGATCTGAGTATGGCAGATTCACCCAGGAAACTATGCCTAAAGAAATGAATTATGCTGGATCATGGACATATGCTTCTCCATCATCAACAGTTTCTGATTTCAGACCAAAAGGGAAAGCAATTCAGATAGAAGATAGTGTTGTTGAACGCCAACCATCTTTTGATAGCAGGCATCCACAAAGTTGGAATTCTGATGTTGTGATACAGATTTCTGTGCATGATCCCACCCAGGAAACCTCCCATTCTGGTGAGGAACATGGGCATACAAATAGCAGGGCCCATGAGACATCTGAAAATGGGGAGCTTGATGCAAATGGAAACCAAAACAATATCTCATATAATACTACGACCGATGATGATTCATCATTAGGAAGTCCAGAAGCAAACACAAGAAAATTAGACAGATGTTCCCAGAAGATCAGTGCATCCCATCCAATGACAATAGACTCCGATGATCACAGTAACCAGGTCATTGGTGTTGATGGGGATAACCATAAGGAGGTGAATGGTATCTCATTGGAGGCCATTGAAATTGCAAATAAAGTGACAGAAAGTCTTGACAGGAATACTTCCTGTGCTGATCAATGCATGATGGAGACACTATTATTGGTGAGTGATGGCGATGATCACCTTAGTCTCATTTCGTCATGTTTTGCATCTGATTCTGAAGCTTCCAAGAACAGTGTTCATTTTGATCCAGAAGATATTCATACTCCTGTAAGCCCTGTGGTGAATTCACACACTGAACCACACAAGCCTGTCACATCATCTTTTAAGAACTCAAAAAGCAATTGCATCAAAAGAAAAAGAGTTGATATCCAAGATTATTCCATCTGTAGAAGTTCTTCTCAAAAGAAGCACAATCATCAGGCCAGGAGGCTTAACAGTGGTGATGAACCAAGTAAGCACAGAAACAATGACAATGATAGGTCACCCACCTCAGATACAGAGAACCCATATAACAGGAATTGCTCAGAGAATTTTCGTGGACAGAAGGACAGGCTGCGAGATTCTGGCGGTAGTAACATAGAAGATAGTCCAGATTATAAAGAACCAAAGTTTTCCTGCCATTATGGTATTAGATATGATGATAACCATCATCGGAATCAAAGAGATAAGAGAAATTTTTCAAGTAGAAAAGGTAGTCACCTGTTCCAAGAGAAACTAGATCCATATACGAAAAGAACTTTTAATGAAAGGCAGACTTTCTGTGAAGATAAGGATAGAGATTGGAGTCACTTTGGAAGAATGCAGTTCACTGAAGAGAGGAGTCCTCTCCCCAGCAGGGAGTCCAGGGGGTTGCATTATAGGTGTTCCTCCACCGTTGAGGAAAGGGGTGCTCAATGGGGAAGGAATAGCAACAAACTGCTATTTAAGAAAATATCCAATTATAAGTGGCATGAAGATGATTTTCTGGGAGAAAAAGCTGGGAGATACGCATCATTCACTAGTCGAAAAGGGAATAATTTTGATGACTTTGATGAGAGGCAGTTGCCACCCGTCAGGAGAGAATTAAGTAACTGGGGGCGAAGGGGTGGATATGTGGACAGTCCCATTTATTTGGATGATTCACACTCTGAGCAATTTGAAGATGAATATTGCAAACACAGAGAAAATCGAGACTGCTCCCATCAGTCTTACAGAGACTTGTATACAGCTGATGAAGGAAGCTGGAATCTCTCCATATCACCAAGAAATGAAGTTTCTTACCCAAGAACAAGTGATGAAAGATATTGGAGACGTGTGAGAAAAATAGATGCCGAAGAAGCCAATCAGATTAATTGGTTTGATGATCACCATGATGCTTATGAAATCGAAGATAACATGTATCGTAATGATCATTTAAGGTGGAGAAGATCTAACTGGCAATCTGAAGTTATGCGCTGGACTGAAGACCAGTTTACTTTCAGACATCACAGTGATGAATTGTATTCTGAGAAAGCATCACGTTCTTATCAGAAATTTGTACGGCGTGAAAAATTTCATGCTAAATATGGTCCTCTGCATGATGGAATGCCTATTGATATTATACAGCCAGAGCAGCATGGATTGAAAATGGCCAGAAAAGGAGTCGGTCCTAACTTTATTAATAGAAGTGCTAAGATGCATAGAGTTAAGCATGAGCAGACGTTGAGGCGCAGGGATTCGATGGACTTGGCTGTTAGGGAACAAAAGATCTCTGCAAGATGCTCCAAAGCCAGATTTTCGATATGCAATGGTAGGCCAGAAAGTAGGGGTGCAGAGATTAGTGGAGAGGGGATAACCTCAGGGAAATCACAGTCGTGTGAATCTGAGAAGGCGAGGGCAGTAGAAAACACCCAAAAATTTGCATGGGACCGAAACAACGAGAAAGGGCATCATATGTTTCCAGTTACAAATCAAAATGCTGATTTGGATATAGAGGAGGGCCAGATTGTAATACAAGAACAGAATACAGCAAATCCTTTGCAGAGAAAACATGCTTATGATCACACAGCACCAGCCCACAGCGTGAAAAAGAGAATGTTTGATTGTCATAATGCTTCCAATGGGAATCAGGTTGTAGAAGGACATGACAAACAAAAGATTCTTCAGACAATGGCTAAAATGGAGCAACGTGAGGAGCGCTTTAAGGAGCCGATCACCTTAAAAAAGGAGCCAGACAAGTTGGTCAAGCCTGAGGTTGATCCCACAGTTCAAGCAGCTGAAGAAAAGCAACATAGGCCAGCCCGAAAGAGGCAGTGGGGTGGTAGGTTCTCAAAGAACGACTCTCTAATGTCGGGAATTCCATTGAAAGCAAGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1181

Amino Acids

135.93

Weight (kDa)

5.81

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 190 - 232 1.3e-17 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1806, 2151
AasI GACNNNNNNGTC 1 cut(s) 3407
AccB7I CCANNNNNTGG 1 cut(s) 419
AccI GTMKAC 1 cut(s) 2411
AciI CCGC 3 cut(s) 57, 697, 1776
AclWI GGATC 7 cut(s) 409, 769, 826, 974, 1448, 1922, 3419
AcoI YGGCCR 1 cut(s) 2817
AcsI RAATTY 9 cut(s) 737, 946, 1492, 1738, 1882, 2720, 2738, 3083, 3522
AcuI CTGAAG 8 cut(s) 45, 633, 1446, 2040, 2652, 2670, 3314, 3465
AdeI CACNNNGTG 1 cut(s) 3250
AfaI GTAC 2 cut(s) 671, 2727
AfeI AGCGCT 1 cut(s) 3365
AfiI CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1258, 2044, 3474
AflIII ACRYGT 2 cut(s) 2500, 2583
AhdI GACNNNNNGTC 1 cut(s) 1311
AhlI ACTAGT 1 cut(s) 2207
AjiI CACGTC 2 cut(s) 571, 2501
AjnI CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
AleI CACNNNNGTG 1 cut(s) 3040
AluBI AGCT 8 cut(s) 660, 758, 1063, 1430, 2186, 2417, 2430, 3443
AluI AGCT 8 cut(s) 660, 758, 1063, 1430, 2186, 2417, 2430, 3443
Alw21I GWGCWC 1 cut(s) 2101
Alw26I GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
AlwI GGATC 7 cut(s) 409, 769, 826, 974, 1448, 1922, 3419
AlwNI CAGNNNCTG 1 cut(s) 854
Aor51HI AGCGCT 1 cut(s) 3365
AoxI GGCC 8 cut(s) 54, 1035, 1281, 1629, 2817, 2981, 3166, 3461
ApaI GGGCCC 1 cut(s) 1039
ApeKI GCWGC 3 cut(s) 1762, 2800, 3440
ApoI RAATTY 9 cut(s) 737, 946, 1492, 1738, 1882, 2720, 2738, 3083, 3522
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 2 cut(s) 2538, 2847
Asp700I GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1885, 2739
AspLEI GCGC 4 cut(s) 52, 2643, 2898, 3366
AspS9I GGNCC 7 cut(s) 558, 1035, 1036, 2756, 2834, 3094, 3166
AsuII TTCGAA 1 cut(s) 523
AvaII GGWCC 4 cut(s) 558, 2756, 2834, 3094
AxyI CCTNAGG 2 cut(s) 3025, 3417
BaeGI GKGCMC 2 cut(s) 369, 1039
BalI TGGCCA 1 cut(s) 2819
BanII GRGCYC 1 cut(s) 1039
BarI GAAGNNNNNNTAC 2 cut(s) 1588, 1620
BbsI GAAGAC 2 cut(s) 117, 2658
Bbv12I GWGCWC 1 cut(s) 2101
BbvI GCAGC 3 cut(s) 1749, 2812, 3452
BceAI ACGGC 4 cut(s) 88, 169, 445, 2744
BcgI CGANNNNNNTGC 4 cut(s) 145, 179, 470, 504
BciT130I CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 6 cut(s) 1213, 1339, 1384, 2551, 2596, 3226
BcoDI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
BcuI ACTAGT 1 cut(s) 2207
BfaI CTAG 2 cut(s) 1925, 2208
BfmI CTRYAG 1 cut(s) 1594
BfoI RGCGCY 1 cut(s) 3367
BfuI GTATCC 1 cut(s) 618
BglII AGATCT 2 cut(s) 2615, 2934
BisI GCNGC 5 cut(s) 57, 698, 1763, 2801, 3441
BlsI GCNGC 5 cut(s) 58, 699, 1764, 2802, 3442
BmcAI AGTACT 1 cut(s) 671
Bme1390I CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
Bme18I GGWCC 4 cut(s) 558, 2756, 2834, 3094
BmeRI GACNNNNNGTC 1 cut(s) 1311
BmgBI CACGTC 2 cut(s) 571, 2501
BmgT120I GGNCC 7 cut(s) 558, 1035, 1036, 2756, 2834, 3094, 3166
BmiI GGNNCC 4 cut(s) 1037, 3095, 3375, 3396
BmrFI CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BmrI ACTGGG 1 cut(s) 2290
BmuI ACTGGG 1 cut(s) 2290
BpiI GAAGAC 2 cut(s) 117, 2658
BplI GAGNNNNNCTC 2 cut(s) 2017, 2049
Bpu14I TTCGAA 1 cut(s) 523
BpuEI CTTGAG 1 cut(s) 381
BsaBI GATNNNNATC 2 cut(s) 1854, 2197
BsaI GGTCTC 1 cut(s) 465
BsaJI CCNNGG 5 cut(s) 548, 681, 783, 987, 2052
BsaWI WCCGGW 1 cut(s) 301
BsaXI ACNNNNNCTCC 2 cut(s) 662, 692
Bsc4I CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1258, 2044, 3474
Bse1I ACTGG 6 cut(s) 512, 570, 2285, 2627, 2656, 3128
Bse21I CCTNAGG 2 cut(s) 3025, 3417
Bse3DI GCAATG 2 cut(s) 424, 2980
Bse8I GATNNNNATC 2 cut(s) 1854, 2197
BseBI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BseDI CCNNGG 5 cut(s) 548, 681, 783, 987, 2052
BseGI GGATG 8 cut(s) 232, 256, 355, 580, 931, 1184, 1189, 2329
BseJI GATNNNNATC 2 cut(s) 1854, 2197
BseLI CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1258, 2044, 3474
BseMI GCAATG 2 cut(s) 424, 2980
BseMII CTCAG 9 cut(s) 104, 756, 1713, 1746, 2328, 2685, 3039, 3042, 3408
BseNI ACTGG 6 cut(s) 512, 570, 2285, 2627, 2656, 3128
BseRI GAGGAG 5 cut(s) 483, 605, 2041, 3176, 3374
BseSI GKGCMC 2 cut(s) 369, 1039
BseXI GCAGC 3 cut(s) 1749, 2812, 3452
BseYI CCCAGC 2 cut(s) 2039, 2186
BsgI GTGCAG 1 cut(s) 3018
Bsh1285I CGRYCG 1 cut(s) 1110
BshFI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2819, 2983, 3168, 3463
BsiEI CGRYCG 1 cut(s) 1110
BsiHKAI GWGCWC 1 cut(s) 2101
BsiSI CCGG 1 cut(s) 302
BslFI GGGAC 2 cut(s) 2295, 3107
BslI CCNNNNNNNGG 6 cut(s) 308, 419, 467, 1258, 2044, 3474
BsmAI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
BsmBI CGTCTC 2 cut(s) 172, 2491
BsmFI GGGAC 2 cut(s) 2295, 3107
BsmI GAATGC 2 cut(s) 2013, 2778
BsnI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2819, 2983, 3168, 3463
Bso31I GGTCTC 1 cut(s) 465
Bsp119I TTCGAA 1 cut(s) 523
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 3 cut(s) 369, 1039, 2101
BspACI CCGC 3 cut(s) 57, 697, 1776
BspANI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2819, 2983, 3168, 3463
BspCNI CTCAG 9 cut(s) 103, 757, 1712, 1745, 2329, 2686, 3038, 3043, 3409
BspLI GGNNCC 4 cut(s) 1037, 3095, 3375, 3396
BspPI GGATC 7 cut(s) 409, 769, 826, 974, 1448, 1922, 3419
BspQI GCTCTTC 1 cut(s) 736
BspT104I TTCGAA 1 cut(s) 523
BspTNI GGTCTC 1 cut(s) 465
BsrDI GCAATG 2 cut(s) 424, 2980
BsrI ACTGG 6 cut(s) 512, 570, 2285, 2627, 2656, 3128
BssECI CCNNGG 5 cut(s) 548, 681, 783, 987, 2052
BssNAI GTATAC 1 cut(s) 2412
BssT1I CCWWGG 1 cut(s) 548
Bst1107I GTATAC 1 cut(s) 2412
Bst2UI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
Bst6I CTCTTC 2 cut(s) 736, 2016
BstBI TTCGAA 1 cut(s) 523
BstC8I GCNNGC 4 cut(s) 54, 722, 929, 3465
BstEII GGTNACC 1 cut(s) 1689
BstF5I GGATG 8 cut(s) 232, 256, 355, 580, 931, 1184, 1189, 2329
BstH2I RGCGCY 1 cut(s) 3367
BstHHI GCGC 4 cut(s) 52, 2643, 2898, 3366
BstMAI GTCTC 9 cut(s) 21, 172, 465, 1037, 1349, 1400, 2373, 2397, 2491
BstMCI CGRYCG 1 cut(s) 1110
BstMWI GCNNNNNNNGC 6 cut(s) 56, 62, 726, 2525, 2800, 3460
BstNI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
BstNSI RCATGY 3 cut(s) 724, 2587, 3221
BstPI GGTNACC 1 cut(s) 1689
BstSCI CCNGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
BstSFI CTRYAG 1 cut(s) 1594
BstSLI GKGCMC 2 cut(s) 369, 1039
BstV1I GCAGC 3 cut(s) 1749, 2812, 3452
BstV2I GAAGAC 2 cut(s) 117, 2658
BstX2I RGATCY 5 cut(s) 401, 761, 1927, 2615, 2934
BstXI CCANNNNNNTGG 3 cut(s) 942, 1232, 2320
BstYI RGATCY 5 cut(s) 401, 761, 1927, 2615, 2934
BstZ17I GTATAC 1 cut(s) 2412
Bsu36I CCTNAGG 2 cut(s) 3025, 3417
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 8 cut(s) 56, 1037, 1283, 1631, 2819, 2983, 3168, 3463
BtgZI GCGATG 1 cut(s) 1395
BtrI CACGTC 2 cut(s) 571, 2501
BtsCI GGATG 8 cut(s) 232, 256, 355, 580, 931, 1184, 1189, 2329
BtsI GCAGTG 1 cut(s) 3485
Cac8I GCNNGC 4 cut(s) 54, 722, 929, 3465
CaiI CAGNNNCTG 1 cut(s) 854
CfoI GCGC 4 cut(s) 52, 2643, 2898, 3366
Cfr13I GGNCC 7 cut(s) 558, 1035, 1036, 2756, 2834, 3094, 3166
CsiI ACCWGGT 1 cut(s) 1224
Csp6I GTAC 2 cut(s) 670, 2726
CviQI GTAC 2 cut(s) 670, 2726
DraIII CACNNNGTG 1 cut(s) 3250
DrdI GACNNNNNNGTC 1 cut(s) 3407
DriI GACNNNNNGTC 1 cut(s) 1311
DseDI GACNNNNNNGTC 1 cut(s) 3407
EaeI YGGCCR 1 cut(s) 2817
Eam1104I CTCTTC 2 cut(s) 736, 2016
Eam1105I GACNNNNNGTC 1 cut(s) 1311
EarI CTCTTC 2 cut(s) 736, 2016
Eco130I CCWWGG 1 cut(s) 548
Eco24I GRGCYC 1 cut(s) 1039
Eco31I GGTCTC 1 cut(s) 465
Eco32I GATATC 1 cut(s) 1576
Eco47I GGWCC 4 cut(s) 558, 2756, 2834, 3094
Eco47III AGCGCT 1 cut(s) 3365
Eco57I CTGAAG 8 cut(s) 45, 633, 1446, 2040, 2652, 2670, 3314, 3465
Eco81I CCTNAGG 2 cut(s) 3025, 3417
Eco91I GGTNACC 1 cut(s) 1689
EcoO109I RGGNCCY 1 cut(s) 1035
EcoO65I GGTNACC 1 cut(s) 1689
EcoRI GAATTC 3 cut(s) 946, 1492, 3522
EcoRII CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
EcoRV GATATC 1 cut(s) 1576
EcoT14I CCWWGG 1 cut(s) 548
EcoT22I ATGCAT 2 cut(s) 1349, 2868
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 1 cut(s) 548
Esp3I CGTCTC 2 cut(s) 172, 2491
FalI AAGNNNNNCTT 2 cut(s) 1948, 1980
FaqI GGGAC 2 cut(s) 2295, 3107
FauNDI CATATG 2 cut(s) 829, 3120
FbaI TGATCA 6 cut(s) 1213, 1339, 1384, 2551, 2596, 3226
FblI GTMKAC 1 cut(s) 2411
Fnu4HI GCNGC 5 cut(s) 57, 698, 1763, 2801, 3441
FokI GGATG 8 cut(s) 239, 263, 362, 587, 918, 1171, 1176, 2336
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 5 cut(s) 57, 698, 1763, 2801, 3441
FspBI CTAG 2 cut(s) 1925, 2208
GlaI GCGC 4 cut(s) 51, 2642, 2897, 3365
GluI GCNGC 5 cut(s) 57, 698, 1763, 2801, 3441
GsaI CCCAGC 2 cut(s) 2043, 2190
HaeII RGCGCY 1 cut(s) 3367
HaeIII GGCC 8 cut(s) 56, 1037, 1283, 1631, 2819, 2983, 3168, 3463
HapII CCGG 1 cut(s) 302
HhaI GCGC 4 cut(s) 52, 2643, 2898, 3366
Hin6I GCGC 4 cut(s) 50, 2641, 2896, 3364
HinP1I GCGC 4 cut(s) 50, 2641, 2896, 3364
HindIII AAGCTT 1 cut(s) 1428
HpaII CCGG 1 cut(s) 302
Hpy166II GTNNAC 5 cut(s) 1748, 2016, 2305, 2412, 2661
Hpy188III TCNNGA 9 cut(s) 497, 611, 1136, 1316, 1457, 1799, 2263, 2378, 3519
Hpy8I GTNNAC 5 cut(s) 1748, 2016, 2305, 2412, 2661
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 6 cut(s) 1747, 2103, 2283, 2417, 3049, 3299
HpyCH4IV ACGT 5 cut(s) 570, 2500, 2707, 2888, 3355
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 62, 726, 2525, 2800, 3460
HpySE526I ACGT 5 cut(s) 570, 2500, 2707, 2888, 3355
HspAI GCGC 4 cut(s) 50, 2641, 2896, 3364
Ksp22I TGATCA 6 cut(s) 1213, 1339, 1384, 2551, 2596, 3226
LguI GCTCTTC 1 cut(s) 736
LmnI GCTCC 8 cut(s) 318, 1060, 2390, 2954, 3349, 3361, 3373, 3394
Lsp1109I GCAGC 3 cut(s) 1749, 2812, 3452
MabI ACCWGGT 1 cut(s) 1224
MaeI CTAG 2 cut(s) 1925, 2208
MaeII ACGT 5 cut(s) 570, 2500, 2707, 2888, 3355
MfeI CAATTG 1 cut(s) 1549
MflI RGATCY 5 cut(s) 401, 761, 1927, 2615, 2934
MhlI GDGCHC 3 cut(s) 369, 1039, 2101
MlsI TGGCCA 1 cut(s) 2819
MluNI TGGCCA 1 cut(s) 2819
MlyI GAGTC 9 cut(s) 230, 388, 443, 1199, 2002, 2038, 2057, 2838, 3500
MmeI TCCRAC 2 cut(s) 204, 923
Mox20I TGGCCA 1 cut(s) 2819
Mph1103I ATGCAT 2 cut(s) 1349, 2868
MroXI GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1885, 2739
MscI TGGCCA 1 cut(s) 2819
MslI CAYNNNNRTG 7 cut(s) 1005, 2163, 2559, 2676, 2679, 3040, 3222
Msp20I TGGCCA 1 cut(s) 2819
MspA1I CMGCKG 3 cut(s) 660, 2417, 3443
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
MunI CAATTG 1 cut(s) 1549
Mva1269I GAATGC 2 cut(s) 2013, 2778
MvaI CCWGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
MwoI GCNNNNNNNGC 6 cut(s) 56, 62, 726, 2525, 2800, 3460
NdeI CATATG 2 cut(s) 829, 3120
NlaIV GGNNCC 4 cut(s) 1037, 3095, 3375, 3396
NmuCI GTSAC 6 cut(s) 239, 1303, 1519, 1689, 1904, 1994
NsiI ATGCAT 2 cut(s) 1349, 2868
NspI RCATGY 3 cut(s) 724, 2587, 3221
NspV TTCGAA 1 cut(s) 523
OliI CACNNNNGTG 1 cut(s) 3040
PaeI GCATGC 1 cut(s) 724
PciI ACATGT 1 cut(s) 2583
PciSI GCTCTTC 1 cut(s) 736
PcsI WCGNNNNNNNCGW 1 cut(s) 458
PctI GAATGC 2 cut(s) 2013, 2778
PdmI GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1885, 2739
PflMI CCANNNNNTGG 1 cut(s) 419
PkrI GCNGC 5 cut(s) 58, 699, 1764, 2802, 3442
PleI GAGTC 9 cut(s) 229, 388, 442, 1199, 2001, 2037, 2056, 2837, 3500
PpsI GAGTC 9 cut(s) 229, 388, 442, 1199, 2001, 2037, 2056, 2837, 3500
PscI ACATGT 1 cut(s) 2583
PshBI ATTAAT 2 cut(s) 2538, 2847
PsiI TTATAA 2 cut(s) 1806, 2151
Psp6I CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
PspEI GGTNACC 1 cut(s) 1689
PspFI CCCAGC 2 cut(s) 2039, 2186
PspGI CCWGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
PspN4I GGNNCC 4 cut(s) 1037, 3095, 3375, 3396
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 7 cut(s) 558, 1035, 1036, 2756, 2834, 3094, 3166
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 5 cut(s) 401, 761, 1927, 2615, 2934
PvuII CAGCTG 3 cut(s) 660, 2417, 3443
RsaI GTAC 2 cut(s) 671, 2727
RsaNI GTAC 2 cut(s) 670, 2726
RseI CAYNNNNRTG 7 cut(s) 1005, 2163, 2559, 2676, 2679, 3040, 3222
SapI GCTCTTC 1 cut(s) 736
SatI GCNGC 5 cut(s) 57, 698, 1763, 2801, 3441
Sau96I GGNCC 7 cut(s) 558, 1035, 1036, 2756, 2834, 3094, 3166
ScaI AGTACT 1 cut(s) 671
SchI GAGTC 9 cut(s) 230, 388, 443, 1199, 2002, 2038, 2057, 2838, 3500
ScrFI CCNGG 7 cut(s) 683, 726, 785, 989, 1226, 1633, 2053
SduI GDGCHC 3 cut(s) 369, 1039, 2101
SexAI ACCWGGT 1 cut(s) 1224
SfcI CTRYAG 1 cut(s) 1594
SfuI TTCGAA 1 cut(s) 523
SinI GGWCC 4 cut(s) 558, 2756, 2834, 3094
SmiMI CAYNNNNRTG 7 cut(s) 1005, 2163, 2559, 2676, 2679, 3040, 3222
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
SpeI ACTAGT 1 cut(s) 2207
SphI GCATGC 1 cut(s) 724
SsiI CCGC 3 cut(s) 57, 697, 1776
SspI AATATT 1 cut(s) 2357
SspMI CTAG 2 cut(s) 1925, 2208
StyD4I CCNGG 7 cut(s) 681, 724, 783, 987, 1224, 1631, 2051
StyI CCWWGG 1 cut(s) 548
TaiI ACGT 5 cut(s) 573, 2503, 2710, 2891, 3358
TaqI TCGA 8 cut(s) 45, 523, 541, 2212, 2377, 2574, 2906, 2966
TaqII GACCGA 3 cut(s) 1124, 2822, 3111
TatI WGTACW 1 cut(s) 669
TauI GCSGC 2 cut(s) 59, 700
TseFI GTSAC 6 cut(s) 239, 1303, 1519, 1689, 1904, 1994
TseI GCWGC 3 cut(s) 1762, 2800, 3440
Tsp45I GTSAC 6 cut(s) 239, 1303, 1519, 1689, 1904, 1994
Van91I CCANNNNNTGG 1 cut(s) 419
VpaK11BI GGWCC 4 cut(s) 558, 2756, 2834, 3094
VspI ATTAAT 2 cut(s) 2538, 2847
XapI RAATTY 9 cut(s) 737, 946, 1492, 1738, 1882, 2720, 2738, 3083, 3522
XceI RCATGY 3 cut(s) 724, 2587, 3221
XcmI CCANNNNNNNNNTGG 3 cut(s) 193, 436, 568
XmiI GTMKAC 1 cut(s) 2411
XmnI GAANNNNTTC 5 cut(s) 690, 1464, 1603, 1885, 2739
XspI CTAG 2 cut(s) 1925, 2208
ZrmI AGTACT 1 cut(s) 671
Zsp2I ATGCAT 2 cut(s) 1349, 2868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.