RLG00000007403

Fip1 motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0004701
Physical Location & Seq
Reverse (-)
16514273 .. 16520559
6287 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007403

Sequence Viewer

Length: 3516 bp
ATGGCAGATTTGGACGACGATTTTGGAGACATCTACACTGATGTCGAAGCGCAGGCCGCTTCAGCCATCAATGGCGTATCGGACTTCGCTCAGTTCTATACAGAACCCGAAGAAGATAGAAATGATAGTAATAACATTGCAAAGAACGGCGACACTTGCTCAGGCGAGGGTTTCGTCTCCGATTCTAAGAAACCCAAAGAGGAATTGGGTGGTAAAGTTTCGGGTTCGGAGTCGGATGAGGATTACAGTGACAGTGAGGATGACCTGAATATAGTTTTGAACGATGGGGGCTGTAAAGGTATTCCCTTTCCGGTTTCAGGTGGAGGGGGCATGAGGATTGATGATTATGAAGATGAGGATGATGATGCTCTTGTGGCCTTGAAAGATTGCAAGTATGTATGGACTAAAGGATCTACTTGTCCAAGCATTGGAAAAGCCAATGAGTCTGTGGATTTGGTGTCGTCCATGCCATTTGGAGTAGACCACTCGCAGATTAGTCGTGTTCGTGATGCACCTAATCCAGTGGTGACTCGAAATAGATTTGGTTTTCGACTTCCTTGGTATAGGACCATATTGGACGTGGATATTGAATCATTTGAGGAGAAGTCGTGGAGGTATCCTGGAGTTGATATAACAGATTACTTCAATTTTGATTTGAATGAGGACAGCTGGAAAGAGTACTGCAACTCCCTGGAACAACTTCGGCAGCTCAAATCCACGCAGTATGGCATGACTGGCTCTTCAAAATTTTCTCAGGCTAAAGAAGCTGGATATGAGTATGGCAGATTCACCCAGGAAATGAATTATGTTGGATCAAGCACATATGCTCCTCTGTCATCAACAGTTTCTGATTGCAGACCAAAAGGGAAAGCAATTCAGATAGAAGATAGTATTGTTGAACGCCAACCATCTTTTGATAGCAGGCATCCACGAAGTTGGAATTCTGATGTTGTGATACAGATTTCCATGCAGGATCCCACCCAGGAAACCTCCCATTCTGGTGAGGAACATGGGCATACAAATAGCAGGGCCCGTGAGACATCTGAAAATGGGGAGTTTGATGCAAATGAAAACCAAAACAATATCTCATATAATACTACAACCGATGATGATTCATCATTAGGAAGTCCAGAAGCAAACACAAGAAAAGTAGACAGATGTTCCCAGAAGATCAGTGCATCCCATCCAATGACAATAGACTCCGATGATCACAGTAACCAGGTCATTGGTGTGGATGGGGATAAACATAAGGAGGTGAATGGTATCTCATTGGAGGCCATTGAAATTGCAAATAAAGTGACAGAAAGTCTTGACAGGAATACTTCCTGTGCTGATCAATGCATGATGGAGACACTATTATCACTGAGTGATGACGATGATCAACTTAGTCTCATTTCATCATGTTTTGCATCTGATTCTGAAGCTTCCAAGAACAGTGTTCATTTTGATCCAGAAGATATTCATACTCCTGTAAGCCCTGTGGTGAATTCACACACTGAATCACGCAAGCCTGTCACATCATCTTTTAAGAACTCAAAAAGCAATTGCATCAAAAGAAAAAGAGTTGATATCCAAGATTATTCCATCTGTAGAAGTTCTTCTCAAAAGAAGCATAATCATCAGGCCAGGAGGCTTAACGGTGTTGATGAACCAAGTAAGCACAGAAACAACGACAATGATAGGTCACCCACCTCAGATACAGAGGACCCATATAACAGGAATTGCTCAGAGAATTTTCGTGGACAGAAGGACAGGCTGCGAGATTCTGGCGGTAGTAACAGAGAAGATAGCCCAGAATATAAAGAACCAAAGTTTTCCTGCCATTATGGTATTAGATATGATGATAACCATCATCGGAATCAAAGAGATAAGAGAAAATTTTCAAGTAGAAAAGGTAGTCACCTGTTCCAAGAGAAACTAGATCCATATGCGAAAAGAACTTTTAATGAAAGGCAGACTTTCTGTGAAGATAAGGATAGAGATTGGAGTCACTTTGGAAGAACGCAGTTCACTGAGGAGAGGAGTCCCCTCCCCAGCAGGGAGTCCAGGGGGTTGCATTCTAGGTGTTCCTCCACTGTTGAGGAAAGGGATGCTCAATGGGGAAGGAATAGCAACAAACTGCTATTTAAGAATATATCCAATTATAAGTGGCATGAAGACGATTTTCTGGGAGAAAAAGCTGGGAGGTACGCATCATTTACTGGTCGAAAAAGGAATAATTTTGATGACTTTGATGAGAGGCAGTTGCCACCTGTCAGGAGAGAATTAAGTAACTGGGGGCGAAGGGGTGGATATGTGGACAGTCCCATTTATTTGGATGATTCACACTCTGAGCAATTTGAAGATGAATATTGCAAACACAGAGAAAATCGAGACTGCTCCCATCAGTCTTACAGAGACTTATATACAGCTGATGAAGGAAGCTGGAATCTCTCCATATCACCAAGAAATGATGTTTCTTACCCAAGAACAAGTGATGAAAGATATTGGAGACGTGTGAGAAAAATAGATGCCGAAGAAGCCAATCAGATTAATTGGTTTGATGATCGCTATGATGCTTATGAAATCGAAGATAACATGTATCGTAACGATCATTTAAGGTGGAGAAGATCTAACTGGCAATCTGAAGTTATGCACTGGACTGAAGACCAGTTTACTTTCAGACATCATGGTGATGAATTGTACTCTAAGAAAGCATCACGTTCTTATCAGAAATTTGTATGGCGTGAAAAATTTCATGCTAAATATGGTCCTCTGCGTGATGGAATGCCTATTGATATTATGCAGCCAGAGCAGCATGGATTGAAAATGCCCAGAAAAGGAGTCAGTGCTAACTTTATTAATAGAAGTGCTAAGATGTATAGAGTTAAGCATGAGCAGACGTTGAGGCGCAGGGATTCGATGGACTTGGCTGTCAGGGAACAAAAGATCTCTGCAAGATGCTCCAAAGCCAGATTTTCGATATGCAATGGTAGGCCAGAAAGTATGGGTGCAGAGATTAGTGGAGAGGGGATAACCTCAGGGAAATCGCAGTCGTGTGAATCTGAGAAGGCGAGGGCAGAAGTCACCCAAAAATTTGCATGGGACCAAAACAACGAGAAAGGGCATCATATGTTTCCAGTTACAAATCAAAATGCTGATTTGGATATAGAGGAGGGCCAGATTGTAATACAAGAACAGAATACAGCAAGTCCTTTGCAGAGACAACATGGTTATGATCACACAGCACCAGCCCACAGCGTGAAAAAGAGAATGTTTGATTGTCATGCTTCCAATGGATATGACATACAAAAGATTCTTCAGACAATGGCTAAAATGGAGCAACGTGGGAAGCGCTTTAAGGAGCCGATCACCTTAAAAAAGGAGCCAGACAAGTTGTTCAAGCCTGAGGTTGATCCCACAGTTCAAGCAGCTGAAGAAAAGCAACATAGGCCAGCCCGAAAGAGGCGGTGGGGTGGTAGGTTCTCAAAGAACGACTCTCTAATGTTGGGAATTCCATTGAAAGCAAGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 map03015
Pfam Domains
Protein Families
Fip1

Protein Analysis

1172

Amino Acids

134.76

Weight (kDa)

5.76

Isoelectric Point (pI)

51.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 193 - 235 9.8e-20 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2145
AasI GACNNNNNNGTC 1 cut(s) 2912
AccB7I CCANNNNNTGG 1 cut(s) 428
AccI GTMKAC 2 cut(s) 480, 1152
AciI CCGC 3 cut(s) 57, 1770, 3448
AclWI GGATC 7 cut(s) 418, 820, 968, 981, 1442, 1916, 3389
AcsI RAATTY 9 cut(s) 746, 940, 1486, 1732, 1877, 2714, 2732, 3074, 3492
AcuI CTGAAG 6 cut(s) 45, 1440, 2646, 2664, 3284, 3435
AdeI CACNNNGTG 2 cut(s) 1367, 3241
AfaI GTAC 3 cut(s) 680, 2189, 2684
AfeI AGCGCT 1 cut(s) 3335
AfiI CCNNNNNNNGG 5 cut(s) 317, 428, 2038, 2819, 3444
AflIII ACRYGT 2 cut(s) 2494, 2577
AhdI GACNNNNNGTC 1 cut(s) 1305
AjiI CACGTC 2 cut(s) 580, 2495
AjnI CCWGG 7 cut(s) 619, 690, 792, 981, 1218, 1625, 2045
AluBI AGCT 8 cut(s) 669, 709, 767, 1424, 2180, 2411, 2424, 3413
AluI AGCT 8 cut(s) 669, 709, 767, 1424, 2180, 2411, 2424, 3413
Alw26I GTCTC 9 cut(s) 21, 181, 1031, 1343, 1394, 2367, 2391, 2485, 3196
AlwI GGATC 7 cut(s) 418, 820, 968, 981, 1442, 1916, 3389
AlwNI CAGNNNCTG 1 cut(s) 848
Aor51HI AGCGCT 1 cut(s) 3335
AoxI GGCC 8 cut(s) 54, 375, 1029, 1275, 1623, 2975, 3157, 3431
ApaI GGGCCC 1 cut(s) 1033
ApeKI GCWGC 5 cut(s) 706, 1756, 2785, 2794, 3410
ApoI RAATTY 9 cut(s) 746, 940, 1486, 1732, 1877, 2714, 2732, 3074, 3492
ArsI GACNNNNNNTTYG 1 cut(s) 37
AseI ATTAAT 2 cut(s) 2532, 2841
Asp700I GAANNNNTTC 5 cut(s) 699, 1458, 1597, 1879, 2733
AspLEI GCGC 3 cut(s) 52, 2892, 3336
AspS9I GGNCC 7 cut(s) 567, 1029, 1030, 1705, 2750, 3085, 3157
AvaII GGWCC 4 cut(s) 567, 1705, 2750, 3085
AxyI CCTNAGG 2 cut(s) 3019, 3387
BaeGI GKGCMC 1 cut(s) 1033
BamHI GGATCC 1 cut(s) 973
BanII GRGCYC 1 cut(s) 1033
BarI GAAGNNNNNNTAC 2 cut(s) 1582, 1614
BbsI GAAGAC 2 cut(s) 2163, 2652
BbvI GCAGC 5 cut(s) 718, 1743, 2797, 2806, 3422
BceAI ACGGC 1 cut(s) 163
BcgI CGANNNNNNTGC 2 cut(s) 479, 513
BciT130I CCWGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
BciVI GTATCC 1 cut(s) 627
BclI TGATCA 4 cut(s) 1207, 1333, 1378, 3217
BcoDI GTCTC 9 cut(s) 21, 181, 1031, 1343, 1394, 2367, 2391, 2485, 3196
BfaI CTAG 2 cut(s) 1919, 2061
BfmI CTRYAG 1 cut(s) 1588
BfoI RGCGCY 1 cut(s) 3337
BfuI GTATCC 1 cut(s) 627
BglII AGATCT 2 cut(s) 2609, 2928
BisI GCNGC 6 cut(s) 57, 707, 1757, 2786, 2795, 3411
BlsI GCNGC 6 cut(s) 58, 708, 1758, 2787, 2796, 3412
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
Bme18I GGWCC 4 cut(s) 567, 1705, 2750, 3085
BmeRI GACNNNNNGTC 1 cut(s) 1305
BmgBI CACGTC 2 cut(s) 580, 2495
BmgT120I GGNCC 7 cut(s) 567, 1029, 1030, 1705, 2750, 3085, 3157
BmiI GGNNCC 6 cut(s) 975, 1031, 1707, 3086, 3345, 3366
BmrFI CCNGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
BmrI ACTGGG 1 cut(s) 2284
BmuI ACTGGG 1 cut(s) 2284
BpiI GAAGAC 2 cut(s) 2163, 2652
BpmI CTGGAG 1 cut(s) 642
Bpu10I CCTNAGC 1 cut(s) 160
BsaBI GATNNNNATC 1 cut(s) 1848
BsaJI CCNNGG 5 cut(s) 557, 690, 792, 981, 2046
BsaWI WCCGGW 1 cut(s) 310
BsaXI ACNNNNNCTCC 6 cut(s) 593, 623, 671, 701, 811, 841
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 428, 2038, 2819, 3444
Bse1I ACTGG 8 cut(s) 521, 739, 2206, 2279, 2621, 2642, 2650, 3119
Bse21I CCTNAGG 2 cut(s) 3019, 3387
Bse3DI GCAATG 2 cut(s) 135, 2974
Bse8I GATNNNNATC 1 cut(s) 1848
BseBI CCWGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
BseDI CCNNGG 5 cut(s) 557, 690, 792, 981, 2046
BseGI GGATG 9 cut(s) 241, 265, 364, 925, 1178, 1183, 1240, 2095, 2323
BseJI GATNNNNATC 1 cut(s) 1848
BseLI CCNNNNNNNGG 5 cut(s) 317, 428, 2038, 2819, 3444
BseMI GCAATG 2 cut(s) 135, 2974
BseNI ACTGG 8 cut(s) 521, 739, 2206, 2279, 2621, 2642, 2650, 3119
BseRI GAGGAG 5 cut(s) 614, 819, 2030, 2035, 3167
BseSI GKGCMC 1 cut(s) 1033
BseXI GCAGC 5 cut(s) 718, 1743, 2797, 2806, 3422
BseYI CCCAGC 2 cut(s) 2033, 2180
BsgI GTGCAG 1 cut(s) 3012
BshFI GGCC 8 cut(s) 56, 377, 1031, 1277, 1625, 2977, 3159, 3433
BsiSI CCGG 1 cut(s) 311
BslFI GGGAC 3 cut(s) 2010, 2289, 3098
BslI CCNNNNNNNGG 5 cut(s) 317, 428, 2038, 2819, 3444
BsmAI GTCTC 9 cut(s) 21, 181, 1031, 1343, 1394, 2367, 2391, 2485, 3196
BsmBI CGTCTC 2 cut(s) 181, 2485
BsmFI GGGAC 3 cut(s) 2010, 2289, 3098
BsmI GAATGC 2 cut(s) 2056, 2772
BsnI GGCC 8 cut(s) 56, 377, 1031, 1277, 1625, 2977, 3159, 3433
Bsp120I GGGCCC 1 cut(s) 1029
Bsp1286I GDGCHC 1 cut(s) 1033
BspACI CCGC 3 cut(s) 57, 1770, 3448
BspANI GGCC 8 cut(s) 56, 377, 1031, 1277, 1625, 2977, 3159, 3433
BspLI GGNNCC 6 cut(s) 975, 1031, 1707, 3086, 3345, 3366
BspPI GGATC 7 cut(s) 418, 820, 968, 981, 1442, 1916, 3389
BspQI GCTCTTC 1 cut(s) 745
BsrDI GCAATG 2 cut(s) 135, 2974
BsrI ACTGG 8 cut(s) 521, 739, 2206, 2279, 2621, 2642, 2650, 3119
BssECI CCNNGG 5 cut(s) 557, 690, 792, 981, 2046
BssT1I CCWWGG 1 cut(s) 557
Bst2UI CCWGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
Bst4CI ACNGT 9 cut(s) 248, 254, 844, 1214, 1436, 1640, 2077, 2303, 3403
Bst6I CTCTTC 1 cut(s) 745
BstC8I GCNNGC 4 cut(s) 54, 923, 1508, 3435
BstEII GGTNACC 1 cut(s) 1683
BstF5I GGATG 9 cut(s) 241, 265, 364, 925, 1178, 1183, 1240, 2095, 2323
BstH2I RGCGCY 1 cut(s) 3337
BstHHI GCGC 3 cut(s) 52, 2892, 3336
BstMAI GTCTC 9 cut(s) 21, 181, 1031, 1343, 1394, 2367, 2391, 2485, 3196
BstNI CCWGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
BstNSI RCATGY 1 cut(s) 2581
BstPI GGTNACC 1 cut(s) 1683
BstSCI CCNGG 7 cut(s) 619, 690, 792, 981, 1218, 1625, 2045
BstSFI CTRYAG 1 cut(s) 1588
BstSLI GKGCMC 1 cut(s) 1033
BstV1I GCAGC 5 cut(s) 718, 1743, 2797, 2806, 3422
BstV2I GAAGAC 2 cut(s) 2163, 2652
BstX2I RGATCY 5 cut(s) 410, 973, 1921, 2609, 2928
BstXI CCANNNNNNTGG 3 cut(s) 936, 1226, 2314
BstYI RGATCY 5 cut(s) 410, 973, 1921, 2609, 2928
Bsu36I CCTNAGG 2 cut(s) 3019, 3387
BsuI GTATCC 1 cut(s) 627
BsuRI GGCC 8 cut(s) 56, 377, 1031, 1277, 1625, 2977, 3159, 3433
BtrI CACGTC 2 cut(s) 580, 2495
BtsCI GGATG 9 cut(s) 241, 265, 364, 925, 1178, 1183, 1240, 2095, 2323
Cac8I GCNNGC 4 cut(s) 54, 923, 1508, 3435
CaiI CAGNNNCTG 1 cut(s) 848
CfoI GCGC 3 cut(s) 52, 2892, 3336
Cfr13I GGNCC 7 cut(s) 567, 1029, 1030, 1705, 2750, 3085, 3157
CsiI ACCWGGT 1 cut(s) 1218
Csp6I GTAC 3 cut(s) 679, 2188, 2683
CviQI GTAC 3 cut(s) 679, 2188, 2683
DraIII CACNNNGTG 2 cut(s) 1367, 3241
DrdI GACNNNNNNGTC 1 cut(s) 2912
DriI GACNNNNNGTC 1 cut(s) 1305
DseDI GACNNNNNNGTC 1 cut(s) 2912
Eam1104I CTCTTC 1 cut(s) 745
Eam1105I GACNNNNNGTC 1 cut(s) 1305
EarI CTCTTC 1 cut(s) 745
Eco130I CCWWGG 1 cut(s) 557
Eco24I GRGCYC 1 cut(s) 1033
Eco32I GATATC 1 cut(s) 1570
Eco47I GGWCC 4 cut(s) 567, 1705, 2750, 3085
Eco47III AGCGCT 1 cut(s) 3335
Eco57I CTGAAG 6 cut(s) 45, 1440, 2646, 2664, 3284, 3435
Eco81I CCTNAGG 2 cut(s) 3019, 3387
Eco91I GGTNACC 1 cut(s) 1683
EcoO109I RGGNCCY 2 cut(s) 1029, 1705
EcoO65I GGTNACC 1 cut(s) 1683
EcoRI GAATTC 3 cut(s) 940, 1486, 3492
EcoRII CCWGG 7 cut(s) 619, 690, 792, 981, 1218, 1625, 2045
EcoRV GATATC 1 cut(s) 1570
EcoT14I CCWWGG 1 cut(s) 557
EcoT22I ATGCAT 1 cut(s) 1343
EcoT38I GRGCYC 1 cut(s) 1033
ErhI CCWWGG 1 cut(s) 557
Esp3I CGTCTC 2 cut(s) 181, 2485
FalI AAGNNNNNCTT 2 cut(s) 1942, 1974
FaqI GGGAC 3 cut(s) 2010, 2289, 3098
FauNDI CATATG 3 cut(s) 823, 1927, 3111
FbaI TGATCA 4 cut(s) 1207, 1333, 1378, 3217
FblI GTMKAC 2 cut(s) 480, 1152
Fnu4HI GCNGC 6 cut(s) 57, 707, 1757, 2786, 2795, 3411
FokI GGATG 9 cut(s) 248, 272, 371, 912, 1165, 1170, 1247, 2102, 2330
FriOI GRGCYC 1 cut(s) 1033
Fsp4HI GCNGC 6 cut(s) 57, 707, 1757, 2786, 2795, 3411
FspBI CTAG 2 cut(s) 1919, 2061
GlaI GCGC 3 cut(s) 51, 2891, 3335
GluI GCNGC 6 cut(s) 57, 707, 1757, 2786, 2795, 3411
GsaI CCCAGC 2 cut(s) 2037, 2184
GsuI CTGGAG 1 cut(s) 642
HaeII RGCGCY 1 cut(s) 3337
HaeIII GGCC 8 cut(s) 56, 377, 1031, 1277, 1625, 2977, 3159, 3433
HapII CCGG 1 cut(s) 311
HhaI GCGC 3 cut(s) 52, 2892, 3336
Hin6I GCGC 3 cut(s) 50, 2890, 3334
HinP1I GCGC 3 cut(s) 50, 2890, 3334
HindIII AAGCTT 1 cut(s) 1422
HpaII CCGG 1 cut(s) 311
Hpy166II GTNNAC 6 cut(s) 481, 1153, 1742, 2010, 2299, 2655
Hpy188III TCNNGA 6 cut(s) 506, 1130, 1310, 1451, 2257, 2372
Hpy8I GTNNAC 6 cut(s) 481, 1153, 1742, 2010, 2299, 2655
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 5 cut(s) 1741, 2097, 2277, 2411, 3043
HpyCH4III ACNGT 9 cut(s) 248, 254, 844, 1214, 1436, 1640, 2077, 2303, 3403
HpyCH4IV ACGT 5 cut(s) 579, 2494, 2701, 2882, 3325
HpySE526I ACGT 5 cut(s) 579, 2494, 2701, 2882, 3325
HspAI GCGC 3 cut(s) 50, 2890, 3334
Ksp22I TGATCA 4 cut(s) 1207, 1333, 1378, 3217
LguI GCTCTTC 1 cut(s) 745
LmnI GCTCC 6 cut(s) 832, 2384, 2948, 3319, 3343, 3364
Lsp1109I GCAGC 5 cut(s) 718, 1743, 2797, 2806, 3422
MabI ACCWGGT 1 cut(s) 1218
MaeI CTAG 2 cut(s) 1919, 2061
MaeII ACGT 5 cut(s) 579, 2494, 2701, 2882, 3325
MfeI CAATTG 1 cut(s) 1543
MflI RGATCY 5 cut(s) 410, 973, 1921, 2609, 2928
MhlI GDGCHC 1 cut(s) 1033
MlyI GAGTC 9 cut(s) 239, 452, 523, 1193, 1996, 2032, 2051, 2832, 3470
MmeI TCCRAC 3 cut(s) 213, 790, 917
Mph1103I ATGCAT 1 cut(s) 1343
MroXI GAANNNNTTC 5 cut(s) 699, 1458, 1597, 1879, 2733
MslI CAYNNNNRTG 5 cut(s) 999, 1229, 2670, 2673, 3213
MspA1I CMGCKG 3 cut(s) 669, 2411, 3413
MspI CCGG 1 cut(s) 311
MspR9I CCNGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
MunI CAATTG 1 cut(s) 1543
Mva1269I GAATGC 2 cut(s) 2056, 2772
MvaI CCWGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
NdeI CATATG 3 cut(s) 823, 1927, 3111
NlaIV GGNNCC 6 cut(s) 975, 1031, 1707, 3086, 3345, 3366
NmuCI GTSAC 8 cut(s) 248, 526, 1297, 1513, 1683, 1898, 1988, 3064
NsiI ATGCAT 1 cut(s) 1343
NspI RCATGY 1 cut(s) 2581
PciI ACATGT 1 cut(s) 2577
PciSI GCTCTTC 1 cut(s) 745
PctI GAATGC 2 cut(s) 2056, 2772
PdmI GAANNNNTTC 5 cut(s) 699, 1458, 1597, 1879, 2733
PflMI CCANNNNNTGG 1 cut(s) 428
PfoI TCCNGGA 1 cut(s) 619
PkrI GCNGC 6 cut(s) 58, 708, 1758, 2787, 2796, 3412
PleI GAGTC 9 cut(s) 238, 451, 523, 1193, 1995, 2031, 2050, 2831, 3470
PpsI GAGTC 9 cut(s) 238, 451, 523, 1193, 1995, 2031, 2050, 2831, 3470
PpuMI RGGWCCY 1 cut(s) 1705
PscI ACATGT 1 cut(s) 2577
PshBI ATTAAT 2 cut(s) 2532, 2841
PsiI TTATAA 1 cut(s) 2145
Psp5II RGGWCCY 1 cut(s) 1705
Psp6I CCWGG 7 cut(s) 619, 690, 792, 981, 1218, 1625, 2045
PspEI GGTNACC 1 cut(s) 1683
PspFI CCCAGC 2 cut(s) 2033, 2180
PspGI CCWGG 7 cut(s) 619, 690, 792, 981, 1218, 1625, 2045
PspN4I GGNNCC 6 cut(s) 975, 1031, 1707, 3086, 3345, 3366
PspOMI GGGCCC 1 cut(s) 1029
PspPI GGNCC 7 cut(s) 567, 1029, 1030, 1705, 2750, 3085, 3157
PspPPI RGGWCCY 1 cut(s) 1705
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 5 cut(s) 410, 973, 1921, 2609, 2928
PvuII CAGCTG 3 cut(s) 669, 2411, 3413
RsaI GTAC 3 cut(s) 680, 2189, 2684
RsaNI GTAC 3 cut(s) 679, 2188, 2683
RseI CAYNNNNRTG 5 cut(s) 999, 1229, 2670, 2673, 3213
SapI GCTCTTC 1 cut(s) 745
SatI GCNGC 6 cut(s) 57, 707, 1757, 2786, 2795, 3411
Sau96I GGNCC 7 cut(s) 567, 1029, 1030, 1705, 2750, 3085, 3157
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 9 cut(s) 239, 452, 523, 1193, 1996, 2032, 2051, 2832, 3470
ScrFI CCNGG 7 cut(s) 621, 692, 794, 983, 1220, 1627, 2047
SduI GDGCHC 1 cut(s) 1033
SexAI ACCWGGT 1 cut(s) 1218
SfcI CTRYAG 1 cut(s) 1588
SinI GGWCC 4 cut(s) 567, 1705, 2750, 3085
SmiMI CAYNNNNRTG 5 cut(s) 999, 1229, 2670, 2673, 3213
SsiI CCGC 3 cut(s) 57, 1770, 3448
SspI AATATT 1 cut(s) 2351
SspMI CTAG 2 cut(s) 1919, 2061
StyD4I CCNGG 7 cut(s) 619, 690, 792, 981, 1218, 1625, 2045
StyI CCWWGG 1 cut(s) 557
TaaI ACNGT 9 cut(s) 248, 254, 844, 1214, 1436, 1640, 2077, 2303, 3403
TaiI ACGT 5 cut(s) 582, 2497, 2704, 2885, 3328
TaqI TCGA 8 cut(s) 45, 532, 550, 2206, 2371, 2568, 2900, 2960
TatI WGTACW 2 cut(s) 678, 2682
TauI GCSGC 1 cut(s) 59
TseFI GTSAC 8 cut(s) 248, 526, 1297, 1513, 1683, 1898, 1988, 3064
TseI GCWGC 5 cut(s) 706, 1756, 2785, 2794, 3410
Tsp45I GTSAC 8 cut(s) 248, 526, 1297, 1513, 1683, 1898, 1988, 3064
Van91I CCANNNNNTGG 1 cut(s) 428
VpaK11BI GGWCC 4 cut(s) 567, 1705, 2750, 3085
VspI ATTAAT 2 cut(s) 2532, 2841
XapI RAATTY 9 cut(s) 746, 940, 1486, 1732, 1877, 2714, 2732, 3074, 3492
XceI RCATGY 1 cut(s) 2581
XcmI CCANNNNNNNNNTGG 3 cut(s) 202, 445, 577
XmiI GTMKAC 2 cut(s) 480, 1152
XmnI GAANNNNTTC 5 cut(s) 699, 1458, 1597, 1879, 2733
XspI CTAG 2 cut(s) 1919, 2061
ZrmI AGTACT 1 cut(s) 680
Zsp2I ATGCAT 1 cut(s) 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.